Miyakogusa Predicted Gene

Lj0g3v0344829.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344829.2 Non Chatacterized Hit- tr|Q2JJW5|Q2JJW5_SYNJB
Putative uncharacterized protein OS=Synechococcus sp.
,35.29,2e-18,seg,NULL; DUF3531,Protein of unknown function
DUF3531,CUFF.23661.2
         (324 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29400.1 | Symbols:  | Protein of unknown function (DUF3531) ...   327   5e-90
AT5G08400.1 | Symbols:  | Protein of unknown function (DUF3531) ...   182   3e-46
AT5G08400.2 | Symbols:  | Protein of unknown function (DUF3531) ...   182   3e-46

>AT4G29400.1 | Symbols:  | Protein of unknown function (DUF3531) |
           chr4:14466350-14467980 FORWARD LENGTH=302
          Length = 302

 Score =  327 bits (839), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 150/201 (74%), Positives = 176/201 (87%)

Query: 124 EEKDYDRDPEFAQILGNFVDDPKTAQARMEERLRKKRNKILQTKTGSGVPMKVLVNKFDF 183
           E+ DYD+DPEFA ILG+ +D+P  AQ +MEERLRKKRNKIL TKTGS   M V  NKF++
Sbjct: 102 EKIDYDKDPEFADILGDCLDNPDKAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEY 161

Query: 184 SNSYIWFEFYNAPLAKDISLICDTIRAWHIMGRLGGCNSMNMQLSQSPMDKRPSYDYIQG 243
           SNSY+W EFYN PL KDI+LI DTIR+WHI+GRLGG NSMNMQLSQ+P+DKRP+YD I G
Sbjct: 162 SNSYMWLEFYNTPLDKDIALISDTIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILG 221

Query: 244 ANVTPTTFYNIGDLEVQDNLARIWVDIGTGEPLLVDVLINALTQISSDFVGIKQVMFGGK 303
           ANV PTTFYNIGDLEVQDN+ARIW+DIGT EPL++DVLINALTQISSD+VGIK+V+FGG 
Sbjct: 222 ANVEPTTFYNIGDLEVQDNVARIWLDIGTSEPLILDVLINALTQISSDYVGIKKVVFGGS 281

Query: 304 EFENWNENLTSEDSGYSVHKI 324
           EFE+W EN+TSE+SG+ VHKI
Sbjct: 282 EFESWKENMTSEESGFRVHKI 302


>AT5G08400.1 | Symbols:  | Protein of unknown function (DUF3531) |
           chr5:2707225-2708911 REVERSE LENGTH=333
          Length = 333

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 128/194 (65%)

Query: 131 DPEFAQILGNFVDDPKTAQARMEERLRKKRNKILQTKTGSGVPMKVLVNKFDFSNSYIWF 190
           D E   +LG+ + +P+  + ++EER+RKK     + KTGS +  KV    F+  +S+IWF
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 199

Query: 191 EFYNAPLAKDISLICDTIRAWHIMGRLGGCNSMNMQLSQSPMDKRPSYDYIQGANVTPTT 250
           E Y  P  +D+ LI   I+AW++MGRLG  N+ N+QL+ + ++  P YD  +G  V P++
Sbjct: 200 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 259

Query: 251 FYNIGDLEVQDNLARIWVDIGTGEPLLVDVLINALTQISSDFVGIKQVMFGGKEFENWNE 310
           F++I D+E QDN  R+WVD+GT +   +DVL+N LT +SS+++GI+QV+FGGK   +W E
Sbjct: 260 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEE 319

Query: 311 NLTSEDSGYSVHKI 324
            +T+ D GY   KI
Sbjct: 320 GMTNPDFGYKYFKI 333


>AT5G08400.2 | Symbols:  | Protein of unknown function (DUF3531) |
           chr5:2707225-2708911 REVERSE LENGTH=300
          Length = 300

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 128/194 (65%)

Query: 131 DPEFAQILGNFVDDPKTAQARMEERLRKKRNKILQTKTGSGVPMKVLVNKFDFSNSYIWF 190
           D E   +LG+ + +P+  + ++EER+RKK     + KTGS +  KV    F+  +S+IWF
Sbjct: 107 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 166

Query: 191 EFYNAPLAKDISLICDTIRAWHIMGRLGGCNSMNMQLSQSPMDKRPSYDYIQGANVTPTT 250
           E Y  P  +D+ LI   I+AW++MGRLG  N+ N+QL+ + ++  P YD  +G  V P++
Sbjct: 167 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 226

Query: 251 FYNIGDLEVQDNLARIWVDIGTGEPLLVDVLINALTQISSDFVGIKQVMFGGKEFENWNE 310
           F++I D+E QDN  R+WVD+GT +   +DVL+N LT +SS+++GI+QV+FGGK   +W E
Sbjct: 227 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEE 286

Query: 311 NLTSEDSGYSVHKI 324
            +T+ D GY   KI
Sbjct: 287 GMTNPDFGYKYFKI 300