Miyakogusa Predicted Gene
- Lj0g3v0344789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0344789.1 tr|Q5RJC3|Q5RJC3_ARATH At5g59830 OS=Arabidopsis
thaliana PE=2 SV=1,32.72,4e-18, ,CUFF.23657.1
(559 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13660.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 317 1e-86
AT5G13660.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 312 3e-85
AT5G59830.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 223 2e-58
AT5G59830.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 223 2e-58
AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 157 2e-38
AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 155 9e-38
AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 70 4e-12
AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/F... 65 2e-10
>AT5G13660.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G59830.2); Has 135 Blast hits to 126 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:4405094-4406983 FORWARD
LENGTH=536
Length = 536
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 225/568 (39%), Positives = 295/568 (51%), Gaps = 72/568 (12%)
Query: 20 ENVGYENSSRIEPKRSH-QWFMDTGESEVFSNKKQAVEAVSDRPVSGVSHVNVSQWDTNS 78
E + Y SSR+E KRSH QW + SE+FSNK+Q V + +H+N+S WDT+
Sbjct: 13 EEIPYSGSSRMELKRSHHQWLTEESSSELFSNKRQQVVEID-------AHMNLSPWDTSL 65
Query: 79 GFHSVTGQFSDRLFGSDVRNVNLVDKNMPSIG--SGNLNMGRKDFGNQYGNDPSMGLSIT 136
V F+D LF P+I S L GR Q S GL +
Sbjct: 66 ----VPSHFTDCLFDD------------PAIAHTSHLLRNGRNYTEEQCNPVSSFGLPLA 109
Query: 137 IPDPSSCLNFGGIRKVKVNQVRDSDNCMPSASTGHSYTRADNSAISIGNGYNKNDDNISL 196
S L+ +N+V + M G + + +A S +G + +S
Sbjct: 110 HHGSSFNLD-------TINKVSNVPEFMVQL-YGQGISTSFETAPSFNSG--QESTTLSF 159
Query: 197 GPTYNNEDENSIAMGTRISKNGDNLLPMGHTFIKGDGGFMLMGHNYGKGDESILSMGQPF 256
G T++N D + I G SK N + F G + +G Y KGDE++LS P
Sbjct: 160 GQTFSNTDRSFILPGQFASKTDGNFI---RNFNNEGVGVVPIGDYYDKGDENVLSTFHPL 216
Query: 257 DREDGRFISMGQSYEKEHGNLISLNTSYTKENESFISIGPTFGKSGEAFITVA------- 309
++ F+SMGQS +K N+ S+++SY K E+F+ + F+T +
Sbjct: 217 EKGVENFLSMGQSLQKADCNIFSVSSSYNKGQENFMPLLSCEQVPEYDFMTESNYHNENA 276
Query: 310 -PLDVSTVPYDTGDSSSLPVGQNHNKGQSS-----------TISFGPFHDDPEPNPSGGI 357
L + G + V GQS+ T+SFG + S +
Sbjct: 277 NALSAGQSSFTEGGEMTFMVSSQERAGQSNDQIRREDDRSETLSFGDCQKETAMGSSVRV 336
Query: 358 ISNYDLLMGNQNSSQDLDSQKDLTELNSEQ----LVNSIPKPNTKTDSNL--KNKEPKST 411
+NY +N S D KD + +E+ + P + + D+ L K K+ K+
Sbjct: 337 SNNY------ENFSHDPAITKDPLHIEAEENMSFECRNPPYASPRVDTLLVPKIKDTKTA 390
Query: 412 KKAPSNNFPSNVKSLLSTGIFDGVRVKYVSWSREKNLQGTIKGTGYLCSCNDCNSKESKP 471
KK +N FPSNVKSLLSTGIFDGV VKY SWSRE+NL+G IKGTGYLC C +C K +K
Sbjct: 391 KKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSRERNLKGMIKGTGYLCGCGNC--KLNKV 448
Query: 472 LNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQKN 531
LNAYEFE+HA KTKHPNNHIYFENGKTIY VVQELKNTPQE LF+AIQ VTGS IN KN
Sbjct: 449 LNAYEFEQHANCKTKHPNNHIYFENGKTIYGVVQELKNTPQEKLFDAIQNVTGSDINHKN 508
Query: 532 FRIWKASYQAATRELQRIYGKDEVTIPS 559
F WKASY A ELQRIYGKD+VT+ S
Sbjct: 509 FNTWKASYHVARLELQRIYGKDDVTLAS 536
>AT5G13660.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G59830.2);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr5:4405094-4406983
FORWARD LENGTH=537
Length = 537
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 225/569 (39%), Positives = 295/569 (51%), Gaps = 73/569 (12%)
Query: 20 ENVGYENSSRIEPKRSH-QWFMDTGESEVFSNKKQAVEAVSDRPVSGVSHVNVSQWDTNS 78
E + Y SSR+E KRSH QW + SE+FSNK+Q V + +H+N+S WDT+
Sbjct: 13 EEIPYSGSSRMELKRSHHQWLTEESSSELFSNKRQQVVEID-------AHMNLSPWDTSL 65
Query: 79 GFHSVTGQFSDRLFGSDVRNVNLVDKNMPSIG--SGNLNMGRKDFGNQYGNDPSMGLSIT 136
V F+D LF P+I S L GR Q S GL +
Sbjct: 66 ----VPSHFTDCLFDD------------PAIAHTSHLLRNGRNYTEEQCNPVSSFGLPLA 109
Query: 137 IPDPSSCLNFGGIRKVKVNQVRDSDNCMPSASTGHSYTRADNSAISIGNGYNKNDDNISL 196
S L+ +N+V + M G + + +A S +G + +S
Sbjct: 110 HHGSSFNLD-------TINKVSNVPEFMVQL-YGQGISTSFETAPSFNSG--QESTTLSF 159
Query: 197 GPTYNNEDENSIAMGTRISKNGDNLLPMGHTFIKGDGGFMLMGHNYGKGDESILSMGQPF 256
G T++N D + I G SK N + F G + +G Y KGDE++LS P
Sbjct: 160 GQTFSNTDRSFILPGQFASKTDGNFI---RNFNNEGVGVVPIGDYYDKGDENVLSTFHPL 216
Query: 257 DREDGRFISMGQSYEKEHGNLISLNTSYTKENESFISIGPTFGKSGEAFITVA------- 309
++ F+SMGQS +K N+ S+++SY K E+F+ + F+T +
Sbjct: 217 EKGVENFLSMGQSLQKADCNIFSVSSSYNKGQENFMPLLSCEQVPEYDFMTESNYHNENA 276
Query: 310 -PLDVSTVPYDTGDSSSLPVGQNHNKGQSS-----------TISFGPFHDDPEPNPSGGI 357
L + G + V GQS+ T+SFG + S +
Sbjct: 277 NALSAGQSSFTEGGEMTFMVSSQERAGQSNDQIRREDDRSETLSFGDCQKETAMGSSVRV 336
Query: 358 ISNYDLLMGNQNSSQDLDSQKDLTELNSEQ----LVNSIPKPNTKTDSNL--KNKEPKST 411
+NY +N S D KD + +E+ + P + + D+ L K K+ K+
Sbjct: 337 SNNY------ENFSHDPAITKDPLHIEAEENMSFECRNPPYASPRVDTLLVPKIKDTKTA 390
Query: 412 KKAPSNNFPSNVKSLLSTGIFDGVRVKYVSWSRE-KNLQGTIKGTGYLCSCNDCNSKESK 470
KK +N FPSNVKSLLSTGIFDGV VKY SWSRE +NL+G IKGTGYLC C +C K +K
Sbjct: 391 KKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGYLCGCGNC--KLNK 448
Query: 471 PLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQK 530
LNAYEFE+HA KTKHPNNHIYFENGKTIY VVQELKNTPQE LF+AIQ VTGS IN K
Sbjct: 449 VLNAYEFEQHANCKTKHPNNHIYFENGKTIYGVVQELKNTPQEKLFDAIQNVTGSDINHK 508
Query: 531 NFRIWKASYQAATRELQRIYGKDEVTIPS 559
NF WKASY A ELQRIYGKD+VT+ S
Sbjct: 509 NFNTWKASYHVARLELQRIYGKDDVTLAS 537
>AT5G59830.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13660.2); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr5:24105423-24107071 FORWARD LENGTH=425
Length = 425
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 17/239 (7%)
Query: 317 PYDTGDSSSLPVGQ-NHNKGQSSTISFGPFHDDPEPNPSGGIISNYDLLMGNQNSSQDLD 375
PY DS + G+ N G ST + + +P G + YD G+ +S +
Sbjct: 200 PYGNEDSQGITFGEINDEHGVGSTSNVVGNYQSYVQDPIGTLDIVYDQETGSSQTSSGVV 259
Query: 376 SQKDLTELNSEQLVNSIPKPNTKTDSNLKNKEPKSTKKAPSNNFPSNVKSLLSTGIFDGV 435
S++ + + + + S+PK E KS+KK S +FPSNV+SL+STG+ DGV
Sbjct: 260 SEQQVAKPS----LGSLPKTKA---------EAKSSKKEASTSFPSNVRSLISTGMLDGV 306
Query: 436 RVKYVSWSREKNLQGTIKGTGYLCSCNDCNSKESKPLNAYEFERHAGAKTKHPNNHIYFE 495
VKYVS SRE+ L+G IKG+GYLC C C+ +K LNAY FERHAG KTKHPNNHIYFE
Sbjct: 307 PVKYVSVSREE-LRGVIKGSGYLCGCQTCDF--TKVLNAYAFERHAGCKTKHPNNHIYFE 363
Query: 496 NGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQKNFRIWKASYQAATRELQRIYGKDE 554
NGKTIY +VQEL+NTP+ +LF+ IQ V GS INQK FRIWK S+QAATRELQRIYGK+E
Sbjct: 364 NGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKAFRIWKESFQAATRELQRIYGKEE 422
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 1 MSFQHKSFWMPRDAGCLAEENVGYENSSRIEPKRSHQWFMDTGESEVFSNKKQAVEAVSD 60
MS++ K FW+ ++ +EE+ Y++S+R + KR H WF+D+ SE+F NKKQAV+
Sbjct: 1 MSYESKGFWVMKNNEHTSEEDSVYDHSTRDDSKRPHPWFVDSSRSEMFPNKKQAVQ---- 56
Query: 61 RPVSGV--SHVNVSQWDTNSGFHSVTGQFSDRLFGSDVRNVNLVDKNMPSIGSGNLNMGR 118
PV G+ S+V + W+++S F SV+ QF DRL G+++ L+ + + +
Sbjct: 57 DPVVGLGKSNVGLPLWESSSVFQSVSNQFMDRLLGAEMPPRPLLFGDRDRTEGCSHHHQN 116
Query: 119 KDFGNQYGNDPSMGLSIT--IPDPSSCLNFGGIRKVKVNQVRDSDNCMPSASTGHSYTRA 176
K Y D S+ LSI+ + C G RK+ V++V+++ + A GHS +
Sbjct: 117 KSIAESYMEDTSVELSISNGVEVAGGCFGGDGNRKLPVSRVKETMSTH-VALEGHSQRKI 175
Query: 177 DNSAISIGNGYNKND-DNISL-GPTYNNEDENSIAMG 211
++S+I + N++ N +L G Y NED I G
Sbjct: 176 ESSSIQACSRENESSYINFALAGHPYGNEDSQGITFG 212
>AT5G59830.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G13660.2); Has 174 Blast hits to 139 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink). | chr5:24105423-24107071 FORWARD
LENGTH=425
Length = 425
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 157/239 (65%), Gaps = 17/239 (7%)
Query: 317 PYDTGDSSSLPVGQ-NHNKGQSSTISFGPFHDDPEPNPSGGIISNYDLLMGNQNSSQDLD 375
PY DS + G+ N G ST + + +P G + YD G+ +S +
Sbjct: 200 PYGNEDSQGITFGEINDEHGVGSTSNVVGNYQSYVQDPIGTLDIVYDQETGSSQTSSGVV 259
Query: 376 SQKDLTELNSEQLVNSIPKPNTKTDSNLKNKEPKSTKKAPSNNFPSNVKSLLSTGIFDGV 435
S++ + + + + S+PK E KS+KK S +FPSNV+SL+STG+ DGV
Sbjct: 260 SEQQVAKPS----LGSLPKTKA---------EAKSSKKEASTSFPSNVRSLISTGMLDGV 306
Query: 436 RVKYVSWSREKNLQGTIKGTGYLCSCNDCNSKESKPLNAYEFERHAGAKTKHPNNHIYFE 495
VKYVS SRE+ L+G IKG+GYLC C C+ +K LNAY FERHAG KTKHPNNHIYFE
Sbjct: 307 PVKYVSVSREE-LRGVIKGSGYLCGCQTCDF--TKVLNAYAFERHAGCKTKHPNNHIYFE 363
Query: 496 NGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQKNFRIWKASYQAATRELQRIYGKDE 554
NGKTIY +VQEL+NTP+ +LF+ IQ V GS INQK FRIWK S+QAATRELQRIYGK+E
Sbjct: 364 NGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKAFRIWKESFQAATRELQRIYGKEE 422
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 1 MSFQHKSFWMPRDAGCLAEENVGYENSSRIEPKRSHQWFMDTGESEVFSNKKQAVEAVSD 60
MS++ K FW+ ++ +EE+ Y++S+R + KR H WF+D+ SE+F NKKQAV+
Sbjct: 1 MSYESKGFWVMKNNEHTSEEDSVYDHSTRDDSKRPHPWFVDSSRSEMFPNKKQAVQ---- 56
Query: 61 RPVSGV--SHVNVSQWDTNSGFHSVTGQFSDRLFGSDVRNVNLVDKNMPSIGSGNLNMGR 118
PV G+ S+V + W+++S F SV+ QF DRL G+++ L+ + + +
Sbjct: 57 DPVVGLGKSNVGLPLWESSSVFQSVSNQFMDRLLGAEMPPRPLLFGDRDRTEGCSHHHQN 116
Query: 119 KDFGNQYGNDPSMGLSIT--IPDPSSCLNFGGIRKVKVNQVRDSDNCMPSASTGHSYTRA 176
K Y D S+ LSI+ + C G RK+ V++V+++ + A GHS +
Sbjct: 117 KSIAESYMEDTSVELSISNGVEVAGGCFGGDGNRKLPVSRVKETMSTH-VALEGHSQRKI 175
Query: 177 DNSAISIGNGYNKND-DNISL-GPTYNNEDENSIAMG 211
++S+I + N++ N +L G Y NED I G
Sbjct: 176 ESSSIQACSRENESSYINFALAGHPYGNEDSQGITFG 212
>AT3G53680.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr3:19892863-19897412 REVERSE LENGTH=841
Length = 841
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 92/132 (69%), Gaps = 2/132 (1%)
Query: 409 KSTKKAPSNNFPSNVKSLLSTGIFDGVRVKYVSWSREKNLQGTIKGTGYLCSCNDCNSKE 468
K KK S NF SNVK LL TGI DG RVKY+S S + LQG I GYLC C C+
Sbjct: 172 KMLKKIDSTNFLSNVKKLLGTGILDGARVKYLSTSAARELQGIIHSGGYLCGCTACDF-- 229
Query: 469 SKPLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGSLIN 528
SK L AYEFERHAG KTKHPNNHIY ENG+ +Y V+QEL+ P ++L E I++V GS ++
Sbjct: 230 SKVLGAYEFERHAGGKTKHPNNHIYLENGRPVYNVIQELRIAPPDVLEEVIRKVAGSALS 289
Query: 529 QKNFRIWKASYQ 540
++ F+ WK S+Q
Sbjct: 290 EEGFQAWKGSFQ 301
>AT2G37520.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15745033-15749615 REVERSE LENGTH=829
Length = 829
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Query: 406 KEPKSTKKAPSNNFPSNVKSLLSTGIFDGVRVKYVSWSREKNLQGTIKGTGYLCSCNDCN 465
K PK KK S ++PSNVK LL TGI +G RVKY+S + L G I GYLC C CN
Sbjct: 161 KMPK--KKIVSLSYPSNVKKLLETGILEGARVKYISTPPVRQLLGIIHSGGYLCGCTTCN 218
Query: 466 SKESKPLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGS 525
SK L+AYEFE+HAGAKT+HPNNHI+ EN + +Y +VQELK P+ +L E I+ V GS
Sbjct: 219 F--SKVLSAYEFEQHAGAKTRHPNNHIFLENRRAVYNIVQELKTAPRVVLEEVIRNVAGS 276
Query: 526 LINQKNFRIWKASYQAATRELQRIYGKDEVTI 557
+N++ R WKAS+Q + R Y D T+
Sbjct: 277 ALNEEGLRAWKASFQQSNSMSDRNYITDHSTV 308
>AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:11913950-11919741 REVERSE LENGTH=1072
Length = 1072
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 417 NNFPSNVKSLLSTGIFDGVRVKYVSWSR-----EKNLQGTIKGTGYLCSCNDCNSKESKP 471
NFP+ +K + GI +G+ V YV ++ + L+G IKG+G LC C+ C +
Sbjct: 375 RNFPAKLKDIFDCGILEGLIVYYVRGAKVREAGTRGLKGVIKGSGVLCFCSACIGIQV-- 432
Query: 472 LNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQKN 531
++ FE HA + K P +I E+G T+ V+ K P L E ++ V G ++ + +
Sbjct: 433 VSPAMFELHASSNNKRPPEYILLESGFTLRDVMNACKENPLATLEEKLRVVVGPILKKSS 492
Query: 532 F 532
Sbjct: 493 L 493
>AT2G36720.1 | Symbols: | Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger domain |
chr2:15393447-15399189 FORWARD LENGTH=1007
Length = 1007
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 420 PSNVKSLLSTGIFDGVRVKYVSWSREKN--LQGTIKGTGYLCSCNDCNSKESKPLNAYEF 477
P V+ L TG+ DG+ V Y+ + + L+G I+ G LCSC+ C+ + ++ +F
Sbjct: 261 PETVRDLFETGLLDGLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSCD--WANVISTSKF 318
Query: 478 ERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQKNF 532
E HA + + + +I FENGK++ V+ +NTP L I +K F
Sbjct: 319 EIHACKQYRRASQYICFENGKSLLDVLNISRNTPLHALEATILDAVDYASKEKRF 373