Miyakogusa Predicted Gene

Lj0g3v0344629.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344629.1 Non Chatacterized Hit- tr|H3GBM2|H3GBM2_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,38.42,2e-19,Metallo-hydrolase/oxidoreductase,NULL;
Lactamase_B_2,NULL; RIBONUCLEASE Z, CHLOROPLAST,NULL;
RIBONUC,CUFF.23675.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74700.1 | Symbols: NUZ, TRZ1 | tRNAse Z1 | chr1:28065345-280...   260   4e-70
AT2G04530.1 | Symbols: CPZ, TRZ2 | Metallo-hydrolase/oxidoreduct...   193   5e-50

>AT1G74700.1 | Symbols: NUZ, TRZ1 | tRNAse Z1 |
           chr1:28065345-28067130 FORWARD LENGTH=280
          Length = 280

 Score =  260 bits (664), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 118/166 (71%), Positives = 148/166 (89%)

Query: 11  GEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITYT 70
           GEEF +RKDLKVKAF+T+HVI SQGY++YS + KLK EYIGLSGNEIKNLK SGVEIT +
Sbjct: 115 GEEFIIRKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDS 174

Query: 71  LTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEHAKDYGHTHLSEIIS 130
           +  PE+AFTGDTTS+F+VDE N DAL+AKVLV+E TF+++S++VEHA+DYGH H+SEI++
Sbjct: 175 IITPEVAFTGDTTSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEIVN 234

Query: 131 YADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF 176
           +A++ +N+AILLIHFSARYTV+EI+ AV ALPPPL GR FALT+GF
Sbjct: 235 HAEKFENKAILLIHFSARYTVKEIEDAVSALPPPLEGRVFALTQGF 280


>AT2G04530.1 | Symbols: CPZ, TRZ2 | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr2:1576808-1578611 FORWARD
           LENGTH=354
          Length = 354

 Score =  193 bits (490), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 90/166 (54%), Positives = 125/166 (75%)

Query: 11  GEEFYLRKDLKVKAFRTYHVIPSQGYILYSVRQKLKPEYIGLSGNEIKNLKSSGVEITYT 70
           GE + LR D+ V+ F T+HVIPSQGY++YSVR+KL+ +Y  L G +I+ +K SGVEIT T
Sbjct: 184 GETYELRNDIVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDT 243

Query: 71  LTEPEIAFTGDTTSEFIVDEKNTDALRAKVLVLECTFVNNSITVEHAKDYGHTHLSEIIS 130
           +  PEIAFTGDTTSE+++D +N DALRAKVL+ E TF++ S + EHA+  GHTH+S+II 
Sbjct: 244 ILSPEIAFTGDTTSEYMLDPRNADALRAKVLITEATFLDESFSTEHAQALGHTHISQIIE 303

Query: 131 YADRLQNRAILLIHFSARYTVEEIQQAVCALPPPLAGRTFALTEGF 176
            A  ++++ +LL HFS+RY VEEI++AV  L   ++ +   LTEGF
Sbjct: 304 NAKWIRSKTVLLTHFSSRYHVEEIREAVLKLQSKVSAKVIPLTEGF 349