Miyakogusa Predicted Gene

Lj0g3v0344389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344389.1 Non Chatacterized Hit- tr|I1NHX8|I1NHX8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58222 PE,71.82,0,UVRD /
RECB / PCRA DNA HELICASE FAMILY MEMBER,DNA helicase, UvrD/REP type; no
description,NULL; UvrD,CUFF.23643.1
         (1124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25120.1 | Symbols: SRS2, ATSRS2 | P-loop containing nucleosi...  1273   0.0  

>AT4G25120.1 | Symbols: SRS2, ATSRS2 | P-loop containing nucleoside
            triphosphate hydrolases superfamily protein |
            chr4:12890694-12898309 FORWARD LENGTH=1149
          Length = 1149

 Score = 1273 bits (3293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 661/1152 (57%), Positives = 815/1152 (70%), Gaps = 54/1152 (4%)

Query: 7    GRISAYFSAAKPLLPQKRP-----------PDPIKVTGDVDAAVRVPGAKRVPLAEIPLN 55
            GRIS  F +AKPLL +KRP           P  +K + D ++          PL E+  N
Sbjct: 18   GRISQSFRSAKPLLDRKRPIENAPNSSNPLPQRMKESMDTESVSHNINFNSTPLMELSAN 77

Query: 56   RSHAVVNDDNVASSDATHCXXXX--------XXXXXXXXXXXXXKENLCQQCFETPRKEP 107
              +  +  +  + +D   C                               + F TP KEP
Sbjct: 78   TPYKRLKPEIESYADGHPCGLRTPPPRFDLDKEIINGFQTDIYADVGSLSEAFVTPLKEP 137

Query: 108  QVSEPVDYFSATGLFDDDFDESILDQIDTLCELKSAEKSAKQQELGLSCDNEVFSESNIX 167
            +     +  S + + DDDFD+SIL++ID +CE +SA K+A        C     S     
Sbjct: 138  ERVTLSNGCSTSSILDDDFDDSILEEIDLICE-QSARKAA--------CQTPTTSIYQTP 188

Query: 168  XXXXXXXXXXXXXXXXXXXXXLFSSRVGLDRKEEEQTDSATQSLKNGSMPDEYLKYLQSL 227
                                    S V L   EE  T +A  +L N SMPDE  KY+ SL
Sbjct: 189  SKDNKSSDPKASLDFRDVEKFEPDSNVKLKLDEETPTIAADPALLN-SMPDECSKYMLSL 247

Query: 228  NDRQREAACTDISVPLMIVAGPGSGKTSTMVGRVLMLLNEGISPSNILAMTFTTAAASEM 287
            NDRQR+AAC++IS PLM++AGPGSGKTSTMVGRVL+LLNEG+ PSNILAMTFT AA SEM
Sbjct: 248  NDRQRDAACSNISTPLMVIAGPGSGKTSTMVGRVLVLLNEGLLPSNILAMTFTKAATSEM 307

Query: 288  RERIGGIAGKPTAKELAISTFHSFSLQLCRSYADKLGRTSEFLIYGQGQQRKAVIEAVRL 347
            RERIG  AGK  AK++ ISTFHSFSLQLCR +ADKL RTSEF +YG GQQR+A+IEAVRL
Sbjct: 308  RERIGKSAGKKAAKDITISTFHSFSLQLCRMHADKLQRTSEFSVYGHGQQRRAIIEAVRL 367

Query: 348  LENGKSKHKDGALLISENSDMLTG-------PNQFKDKAKKWLNFVTQAKASGKTSAEYR 400
             E  K K+     +  E+ + L G       P   KD +KKW  FVTQ KASGK+  + R
Sbjct: 368  YEEEK-KNGSKTSVPCESGEGLNGAGAGAVCPEYAKDLSKKWQKFVTQGKASGKSPEQCR 426

Query: 401  EMGNEIGAEILENYNYILKSCNALDYHDLISCSVKLLTDFPEVFRECQDSWKAVVIDEFQ 460
            +MGNEIGA+IL NYN ILK+C+ALDYHDLISCSV LL+DFPEVF+ECQD+WKA+++DEFQ
Sbjct: 427  KMGNEIGAKILGNYNDILKACDALDYHDLISCSVTLLSDFPEVFKECQDTWKAIIVDEFQ 486

Query: 461  DTSAMQYRLLSMLASHHKITIVGDDDQSIFSFNGADISGFISFRNDFPNFKEIRLNKNYR 520
            DTS MQY+LL ML SH+ ITIVGDDDQSIF FNGAD SGF SFR DFPN+KE+RL KNYR
Sbjct: 487  DTSTMQYKLLRMLGSHNHITIVGDDDQSIFGFNGADSSGFDSFRRDFPNYKEVRLIKNYR 546

Query: 521  STRYIIEAASSLIQNNAKRCPRKDVLTDNSSGSKIVMKECHHEDAQCAFVVDKILEISSN 580
            S+R+I+EAASS+I+NN KRC  K + ++NS GSKI +KECH+E+AQCA+V+DKI+EI+++
Sbjct: 547  SSRHIVEAASSIIKNNTKRCQSKSISSENSQGSKITVKECHNEEAQCAYVIDKIIEITND 606

Query: 581  HSVAKCSYGNIAILYRRQISGKAFQMAFRDRKIPFNIHGVAFYRKKVVRTIISMLRTALP 640
             S   CS+G+IAILYRRQ+SGK FQ AFR RKIPFN+HGVAFYRKKVV+ I++ML+T   
Sbjct: 607  GSTPCCSHGDIAILYRRQVSGKVFQNAFRQRKIPFNVHGVAFYRKKVVQVILAMLKTTFS 666

Query: 641  DCDDSSYNRVFKALLPLEKDRKKRVIDHINKISTIRKCSFLSAACDIFNAKISGTFKRSE 700
            +CDD+SY RVFKALLP EK+ KKR+I+HI KIST RKCSF+SAA DIFNAKISGTFKRS+
Sbjct: 667  ECDDASYRRVFKALLPFEKEEKKRIIEHIEKISTSRKCSFISAASDIFNAKISGTFKRSQ 726

Query: 701  LTHGKKVLMTIDIISKLVHREKSISAIINCATNMIPEKYLLEQRASVDVDGGRLLNEDYD 760
            LT G+KVL T+D+++KLV RE+S+SA++ C  NMIP+KYLLEQRA VD DGG+LLNED D
Sbjct: 727  LTQGRKVLQTLDMVAKLVDREQSLSAVVTCVANMIPQKYLLEQRAVVDNDGGKLLNEDND 786

Query: 761  VRSVLQYLLDDVSEFLSTKFIEIKGGKDISEDNGCIFVLKAFIDYLFERERENFCARRKD 820
            +RSVLQYL+DDV+EF+ST     +    I E  GC   L +FI+Y+ ERE ENF +RR+D
Sbjct: 787  LRSVLQYLMDDVAEFISTHCTTTEEEDAIKEKKGC-NQLHSFINYISERETENFRSRRRD 845

Query: 821  NENSVTLTTIHQAKGLEWDVVFIVKANESEIPLLHDFKGTVKESGALVEEERRLLYVAMT 880
            NENSVTLTTIHQ+KGLEWD+VFIVKANE+EIPLLH+  G   ESG  +EEERRLLYVAMT
Sbjct: 846  NENSVTLTTIHQSKGLEWDIVFIVKANENEIPLLHESNGNASESGTSLEEERRLLYVAMT 905

Query: 881  RARKQLFILYITMDSNWQVLQPSRFLREIPHHLLEVQGEMTSHEPQIKH-----GAHQKE 935
            RARK+LF LY+T+DSNWQVLQPSRFL+EIP HLL+VQG+M+ ++ +  H        Q  
Sbjct: 906  RARKKLFFLYVTVDSNWQVLQPSRFLKEIPGHLLQVQGDMSVNDCRKVHENLPNKTEQSV 965

Query: 936  TTFCSTDLLLKEQTL-EADWVPMPNDLDNNHSHKASDE--LAEATNGSNFLRRFNVEDRS 992
            ++F  TD+  +E  L + D + +P D        AS+E   A A NG+NFL+RF+VE RS
Sbjct: 966  SSF-GTDIKHEESKLTDNDVMNIPEDY-------ASEESIAAYALNGNNFLKRFDVEVRS 1017

Query: 993  VVSHLFHQWAKKKAFQDPKRLLDKVGFVIDERLRQQXXXXXXXXXXXXSCIRCDEAFQYA 1052
            VVSHLFH WAKK+AFQ+PKRL+DKV FVI ERL  +            S +  +EAFQYA
Sbjct: 1018 VVSHLFHNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRALKSSLTSEEAFQYA 1077

Query: 1053 QSILRWEQIPADKRAHLMREKQEHFLKLRIEKAMGSSTPTDKQISYLKKLGCTATPTSRL 1112
            + +LRWEQ+PAD RAH++REKQEHF KLRIE +MG+S  T KQI++L  LGCT  PTSRL
Sbjct: 1078 EHVLRWEQLPADTRAHIVREKQEHFQKLRIENSMGTSEATSKQIAFLHSLGCTVVPTSRL 1137

Query: 1113 HASHLIEQYKSL 1124
            HAS LIEQYKSL
Sbjct: 1138 HASRLIEQYKSL 1149