Miyakogusa Predicted Gene

Lj0g3v0344319.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344319.4 tr|Q9SJZ7|Q9SJZ7_ARATH Molecular chaperone DnaJ
OS=Arabidopsis thaliana GN=At2g22360 PE=3
SV=2,45.19,0.00000000000002,no description,Heat shock protein DnaJ,
N-terminal,CUFF.23623.4
         (120 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22360.1 | Symbols:  | DNAJ heat shock family protein | chr2:...    85   9e-18
AT4G39960.1 | Symbols:  | Molecular chaperone Hsp40/DnaJ family ...    78   1e-15

>AT2G22360.1 | Symbols:  | DNAJ heat shock family protein |
           chr2:9498162-9500459 FORWARD LENGTH=442
          Length = 442

 Score = 85.1 bits (209), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 2/104 (1%)

Query: 1   MAITPLGSTSASQWGVRPQLLLRSSLTGKGASSSH-NVTTRVSFMAAPSSSFLSPDSLHI 59
           MAI  LGST  +QW +RPQ  +R+    +  S+ H N +++V+ + A  SS  S  SL  
Sbjct: 1   MAIIQLGSTCVAQWSIRPQFAVRAYYPSRIESTRHQNSSSQVNCLGASKSSMFSHGSLPF 60

Query: 60  LFNAGLYQSLKC-RKGSRLIVRANTDYYSVLGVSRNASKSEIKS 102
           L   G+ +++   R+GSR  VRA+ DYYSVLGVS+NA+K+EIKS
Sbjct: 61  LSMTGMSRNMHPPRRGSRFTVRADADYYSVLGVSKNATKAEIKS 104


>AT4G39960.1 | Symbols:  | Molecular chaperone Hsp40/DnaJ family
           protein | chr4:18534194-18536320 FORWARD LENGTH=447
          Length = 447

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 1/104 (0%)

Query: 1   MAITPLGSTSASQWGV-RPQLLLRSSLTGKGASSSHNVTTRVSFMAAPSSSFLSPDSLHI 59
           MA+   GS+  +QWG+ RP+  +++    +  S   N  ++++ + A  SS  +  SL  
Sbjct: 1   MALIQFGSSCVAQWGILRPRFAVKAFYPSRLESHQDNCISQINCLGASRSSMFAQGSLPF 60

Query: 60  LFNAGLYQSLKCRKGSRLIVRANTDYYSVLGVSRNASKSEIKSG 103
           L   G+  +   R+G+R  VRA+TD+YSVLGVS+NA+K+EIKS 
Sbjct: 61  LSLTGVSPNTHSRRGARFTVRADTDFYSVLGVSKNATKAEIKSA 104