Miyakogusa Predicted Gene

Lj0g3v0344269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344269.1 Non Chatacterized Hit- tr|I3SH91|I3SH91_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,59.74,4e-19,Yos1,Yos1-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Yos1-like,CUFF.23617.1
         (77 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54085.2 | Symbols:  | Yos1-like protein | chr3:20026780-2002...    95   9e-21
AT3G54085.1 | Symbols:  | Yos1-like protein | chr3:20026780-2002...    95   9e-21
AT2G37975.1 | Symbols:  | Yos1-like protein | chr2:15891900-1589...    93   4e-20

>AT3G54085.2 | Symbols:  | Yos1-like protein |
          chr3:20026780-20027016 REVERSE LENGTH=78
          Length = 78

 Score = 95.1 bits (235), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 1  MGFWTIIEGFILLSNALAILNEDRFLAPRGWGFSD-HLDPRTNTVKRKIIGLIYFCQYGR 59
          MGFWT+++G +L +NALAILNEDRFL PRGW   + H   R N+ K +IIGLI+ CQY R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 60 IPLIVINSITIIAKLVFG 77
          +PL++IN+  I+ KL+ G
Sbjct: 61 LPLMLINTAVIVLKLISG 78


>AT3G54085.1 | Symbols:  | Yos1-like protein |
          chr3:20026780-20027016 REVERSE LENGTH=78
          Length = 78

 Score = 95.1 bits (235), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 1  MGFWTIIEGFILLSNALAILNEDRFLAPRGWGFSD-HLDPRTNTVKRKIIGLIYFCQYGR 59
          MGFWT+++G +L +NALAILNEDRFL PRGW   + H   R N+ K +IIGLI+ CQY R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 60 IPLIVINSITIIAKLVFG 77
          +PL++IN+  I+ KL+ G
Sbjct: 61 LPLMLINTAVIVLKLISG 78


>AT2G37975.1 | Symbols:  | Yos1-like protein |
          chr2:15891900-15892136 REVERSE LENGTH=78
          Length = 78

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 1  MGFWTIIEGFILLSNALAILNEDRFLAPRGWGFSD-HLDPRTNTVKRKIIGLIYFCQYGR 59
          MGFWT++EG +L +NALAILNEDRFLAP+GW  ++ H   + N++K +IIGLI+ C Y R
Sbjct: 1  MGFWTLMEGLLLFANALAILNEDRFLAPKGWTLAELHQTGKRNSLKGQIIGLIHACHYMR 60

Query: 60 IPLIVINSITIIAKLVFG 77
          +PL++ N I I+ KL  G
Sbjct: 61 LPLMLFNLIVIVFKLFSG 78