Miyakogusa Predicted Gene

Lj0g3v0344099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344099.1 Non Chatacterized Hit- tr|I1JL40|I1JL40_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,38.1,0.0009,OS03G0848700 PROTEIN,NULL; LEUCINE-RICH
REPEAT-CONTAINING PROTEIN,NULL; no description,NULL; L
domai,NODE_68075_length_467_cov_9.513919.path1.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14470.1 | Symbols:  | NB-ARC domain-containing disease resis...   115   1e-26
AT3G14460.1 | Symbols:  | LRR and NB-ARC domains-containing dise...   110   6e-25

>AT3G14470.1 | Symbols:  | NB-ARC domain-containing disease
           resistance protein | chr3:4857940-4861104 FORWARD
           LENGTH=1054
          Length = 1054

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 8/166 (4%)

Query: 4   KKHIEHLVLYWSLDVEDCMD------SQTEMDILCKLKPHQDLESLRINGYRGTRYPEWV 57
           KKH+  +   W        +      +Q E ++  KL+PH+ +E L I  Y+G R+P+W+
Sbjct: 725 KKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFPDWL 784

Query: 58  GKPCYHNMTSITLSDCKNCFTLPSLGGLPSLKDLTISNFKMLETVDASFFNNSDSGSLLT 117
             P +  +  I L +C+ C +LPSLG LP LK+L IS    L+++   F+ +        
Sbjct: 785 SDPSFSRIVCIRLRECQYCTSLPSLGQLPCLKELHISGMVGLQSIGRKFYFSDQQLRDQD 844

Query: 118 VVPFPSLESLEFESMPCWEEWNCCEPPHA--FPQLKRLTIARCPKL 161
             PF SLE+L F+++P W+EW          FP LK+L I RCP+L
Sbjct: 845 QQPFRSLETLRFDNLPDWQEWLDVRVTRGDLFPSLKKLFILRCPEL 890


>AT3G14460.1 | Symbols:  | LRR and NB-ARC domains-containing disease
           resistance protein | chr3:4851990-4856264 REVERSE
           LENGTH=1424
          Length = 1424

 Score =  110 bits (274), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 16/169 (9%)

Query: 4   KKHIEHLVLYWSLDVEDCMDSQ------TEMDILCKLKPHQDLESLRINGYRGTRYPEWV 57
           K  ++ L+L W++     +          + ++L  L+PH  L++  I  Y+G  +P+W+
Sbjct: 719 KPFLDGLILKWTVKGSGFVPGSFNALACDQKEVLRMLEPHPHLKTFCIESYQGGAFPKWL 778

Query: 58  GKPCYHNMTSITLSDCKNCFTLPSLGGLPSLKDLTISNFKMLETVDASFF---NNSDSGS 114
           G   +  +TS+TLS C  C +LP +G LPSLK L+I  F +L+ V   FF   NNS    
Sbjct: 779 GDSSFFGITSVTLSSCNLCISLPPVGQLPSLKYLSIEKFNILQKVGLDFFFGENNSRG-- 836

Query: 115 LLTVVPFPSLESLEFESMPCWEEWNCCEPPHA-FPQLKRLTIARCPKLK 162
               VPF SL+ L+F  MP W+EW C E     FP L++L I RCP L+
Sbjct: 837 ----VPFQSLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCPSLR 881