Miyakogusa Predicted Gene
- Lj0g3v0343839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0343839.1 Non Chatacterized Hit- tr|I1LYP3|I1LYP3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.38,0,seg,NULL;
AUX_IAA,AUX/IAA protein; CAD & PB1 domains,NULL; FAMILY NOT
NAMED,NULL; IAA_ARF,Aux/IAA-AR,CUFF.23587.1
(276 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 186 1e-47
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 186 1e-47
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 184 5e-47
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 183 1e-46
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 176 2e-44
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 175 3e-44
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 175 3e-44
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 136 2e-32
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 124 5e-29
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 122 2e-28
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 121 6e-28
AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducib... 120 7e-28
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 120 1e-27
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 119 2e-27
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 117 9e-27
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 116 2e-26
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 114 6e-26
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 114 9e-26
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 114 9e-26
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 114 9e-26
AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein ... 109 2e-24
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 105 4e-23
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 103 1e-22
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 96 3e-20
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 96 3e-20
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 95 5e-20
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 92 3e-19
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 92 3e-19
AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 91 9e-19
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 91 1e-18
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 90 2e-18
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 88 7e-18
AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 87 8e-18
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 82 4e-16
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 80 1e-15
AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34... 80 2e-15
AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32... 77 2e-14
AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29... 73 2e-13
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 72 5e-13
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 72 5e-13
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 72 5e-13
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 72 5e-13
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 62 5e-10
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 62 5e-10
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 61 7e-10
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 61 7e-10
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 61 9e-10
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 59 5e-09
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 58 9e-09
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 58 9e-09
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 58 9e-09
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 57 1e-08
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 52 4e-07
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 52 5e-07
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 50 1e-06
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 50 1e-06
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 49 5e-06
AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33... 49 5e-06
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 141/237 (59%), Gaps = 42/237 (17%)
Query: 48 RIFTAKDFXXXXXXXXXXNVAAGTKRAAESLV----ATNRPSQVVGWPPLPACRMNSF-N 102
R+ TAKDF + G+KRAA+S + R SQVVGWPP+ + RMNS N
Sbjct: 44 RLLTAKDFP-----------SVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVN 92
Query: 103 SQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIG 162
+QA + + A K K + + + N + FIKVNMDG IG
Sbjct: 93 NQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG-----------FIKVNMDGVAIG 141
Query: 163 RKVDLSAHSSYETLAETLEDMF---NESTASITCKGSNGDDRGIIFGGERHSKLLDGSSK 219
RKVDL+AHSSYE LA+TLEDMF N T +T + + + +LLDGSS+
Sbjct: 142 RKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFT------------KPLRLLDGSSE 189
Query: 220 FVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRLEEKNSRQKSKPI 276
FVLTYEDKEGDWMLVGDVPW MF SV+RLR+M+TSEANGLA R +E N RQ+ +P+
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 246
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 141/237 (59%), Gaps = 42/237 (17%)
Query: 48 RIFTAKDFXXXXXXXXXXNVAAGTKRAAESLV----ATNRPSQVVGWPPLPACRMNSF-N 102
R+ TAKDF + G+KRAA+S + R SQVVGWPP+ + RMNS N
Sbjct: 44 RLLTAKDFP-----------SVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVN 92
Query: 103 SQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIG 162
+QA + + A K K + + + N + FIKVNMDG IG
Sbjct: 93 NQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG-----------FIKVNMDGVAIG 141
Query: 163 RKVDLSAHSSYETLAETLEDMF---NESTASITCKGSNGDDRGIIFGGERHSKLLDGSSK 219
RKVDL+AHSSYE LA+TLEDMF N T +T + + + +LLDGSS+
Sbjct: 142 RKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFT------------KPLRLLDGSSE 189
Query: 220 FVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRLEEKNSRQKSKPI 276
FVLTYEDKEGDWMLVGDVPW MF SV+RLR+M+TSEANGLA R +E N RQ+ +P+
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 246
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 142/238 (59%), Gaps = 43/238 (18%)
Query: 48 RIFTAKDFXXXXXXXXXXNVAAGTKRAAESLV-ATNRP----SQVVGWPPLPACRMNSF- 101
R+ TAKDF + G+KRAA+S A + P SQVVGWPP+ + RMNS
Sbjct: 44 RLLTAKDFP-----------SVGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLV 92
Query: 102 NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPI 161
N+QA + + A K K + + + N + FIKVNMDG I
Sbjct: 93 NNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG-----------FIKVNMDGVAI 141
Query: 162 GRKVDLSAHSSYETLAETLEDMF---NESTASITCKGSNGDDRGIIFGGERHSKLLDGSS 218
GRKVDL+AHSSYE LA+TLEDMF N T +T + + + +LLDGSS
Sbjct: 142 GRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFT------------KPLRLLDGSS 189
Query: 219 KFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRLEEKNSRQKSKPI 276
+FVLTYEDKEGDWMLVGDVPW MF SV+RLR+M+TSEANGLA R +E N RQ+ +P+
Sbjct: 190 EFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 247
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 141/235 (60%), Gaps = 37/235 (15%)
Query: 47 ARIFTAKDFXXXXXXXXXXNVAAGTKRAAESL----VATNRPSQVVGWPPLPACRMNSF- 101
RI TAKDF + G+KR+AES + R SQVVGWPP+ RMNS
Sbjct: 37 GRILTAKDFP-----------SVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLV 85
Query: 102 NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPI 161
N+QA AE+ VV+ ++ +++K ++ F+KVNMDG I
Sbjct: 86 NNQAMKA----ARAEEGDGEKKVVKN-----DELKDVSMKVNPKVQGLGFVKVNMDGVGI 136
Query: 162 GRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFV 221
GRKVD+ AHSSYE LA+TLE+MF T + TC+ + +LLDGSS FV
Sbjct: 137 GRKVDMRAHSSYENLAQTLEEMFFGMTGT-TCREK-----------VKPLRLLDGSSDFV 184
Query: 222 LTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRLEEKNSRQKSKPI 276
LTYEDKEGDWMLVGDVPW MF SV+RLRIM TSEA+GLAPR +E+ RQ++ P+
Sbjct: 185 LTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 123/197 (62%), Gaps = 25/197 (12%)
Query: 66 NVAAGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVV 125
+V AG KR A+S+ AT+ QVVGWPP+ RMNS +QAK++ DP E S++ N
Sbjct: 70 SVIAGIKRTADSMAATS--GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNK-- 125
Query: 126 RKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFN 185
N D +R+S F+KV MDG PIGRK+DL+AH YE+L+ TLE+MF
Sbjct: 126 -------------NRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFL 172
Query: 186 ESTASITCKGSNGDDRGIIFGGERHSKLL-DGSSKFVLTYEDKEGDWMLVGDVPWGMFTG 244
+ ++G E K+L DGSS VLTYEDKEGDWMLVGDVPWGMF G
Sbjct: 173 KPKLGSRTLETDGH-------METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIG 225
Query: 245 SVRRLRIMRTSEANGLA 261
SVRRLRIM+TSEA G A
Sbjct: 226 SVRRLRIMKTSEATGKA 242
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 122/195 (62%), Gaps = 25/195 (12%)
Query: 66 NVAAGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVV 125
+V AG KR A+S+ AT+ QVVGWPP+ RMNS +QAK++ DP E S++ N
Sbjct: 70 SVIAGIKRTADSMAATS--GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNK-- 125
Query: 126 RKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFN 185
N D +R+S F+KV MDG PIGRK+DL+AH YE+L+ TLE+MF
Sbjct: 126 -------------NRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFL 172
Query: 186 ESTASITCKGSNGDDRGIIFGGERHSKLL-DGSSKFVLTYEDKEGDWMLVGDVPWGMFTG 244
+ ++G E K+L DGSS VLTYEDKEGDWMLVGDVPWGMF G
Sbjct: 173 KPKLGSRTLETDGH-------METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIG 225
Query: 245 SVRRLRIMRTSEANG 259
SVRRLRIM+TSEA G
Sbjct: 226 SVRRLRIMKTSEATG 240
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 122/195 (62%), Gaps = 25/195 (12%)
Query: 66 NVAAGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVV 125
+V AG KR A+S+ AT+ QVVGWPP+ RMNS +QAK++ DP E S++ N
Sbjct: 70 SVIAGIKRTADSMAATS--GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNK-- 125
Query: 126 RKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFN 185
N D +R+S F+KV MDG PIGRK+DL+AH YE+L+ TLE+MF
Sbjct: 126 -------------NRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFL 172
Query: 186 ESTASITCKGSNGDDRGIIFGGERHSKLL-DGSSKFVLTYEDKEGDWMLVGDVPWGMFTG 244
+ ++G E K+L DGSS VLTYEDKEGDWMLVGDVPWGMF G
Sbjct: 173 KPKLGSRTLETDGH-------METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIG 225
Query: 245 SVRRLRIMRTSEANG 259
SVRRLRIM+TSEA G
Sbjct: 226 SVRRLRIMKTSEATG 240
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 103/177 (58%), Gaps = 14/177 (7%)
Query: 88 VGWPPLPACRMNSFNSQAKSTEV---FDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
VGWPPL R+NS +QAKS +K + + VV A +D I +
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVV---AAKNDDACFI-----K 146
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
R+S +KV MDG IGRKVDL+A SY L +TL+ MF + + +T + G
Sbjct: 147 SSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYK---T 203
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLA 261
SKLLDGSS++++TY+DK+GDWMLVGDVPW MF GSV RLRIM+TS G+
Sbjct: 204 IKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVG 260
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 108/200 (54%), Gaps = 24/200 (12%)
Query: 68 AAGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRK 127
A K S A +QVVGWPP+ + R NS S ++K +N+
Sbjct: 125 AVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQ---------SQKPGNNSETEEA 175
Query: 128 GAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNES 187
A++G + + ++KV+M+G P RK+DL + SY L+ LE MF S
Sbjct: 176 EAKSGPEQPCL------------YVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMF--S 221
Query: 188 TASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVR 247
+I GS+G R + LL GS ++V+TYEDK+ DWMLVGDVPW MF S +
Sbjct: 222 CFTIGQFGSHGGCGRDGLNESRLTDLLRGS-EYVVTYEDKDSDWMLVGDVPWEMFICSCK 280
Query: 248 RLRIMRTSEANGLAPRLEEK 267
+LRIM++SEA GLAPR+ EK
Sbjct: 281 KLRIMKSSEAIGLAPRVMEK 300
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 98/189 (51%), Gaps = 26/189 (13%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+QVVGWPP+ R N Q S+ + +EK+ +
Sbjct: 81 AQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGG--------------------- 119
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
+ +KV+MDG P RKVDL + SY+ L++ L MF+ T G+ G I
Sbjct: 120 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM-----GNYGAQGMID 174
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRL 264
F E L SS++V +YEDK+GDWMLVGDVPW MF S +RLRIM+ SEA GLAPR
Sbjct: 175 FMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRA 234
Query: 265 EEKNSRQKS 273
EK + +S
Sbjct: 235 MEKYCKNRS 243
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 16/173 (9%)
Query: 84 PSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDK 143
P VVGWPP+ + R N + + + S ++N V K + D + + K
Sbjct: 94 PGPVVGWPPVRSFRKNLASGSSSK------LGNDSTTSNGVTLKNQKC--DAAAKTTEPK 145
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGI 203
R F+K+NM G PIGRKVDLSAH+SYE L+ T++ +F A+ S+ +D
Sbjct: 146 RQ--GGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKP 203
Query: 204 IFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSE 256
I G LLDG+ ++ LTYED EGD MLVGDVPW MF SV+RLR+++TSE
Sbjct: 204 ITG------LLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible
14 | chr4:8348521-8349923 REVERSE LENGTH=228
Length = 228
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 97/183 (53%), Gaps = 34/183 (18%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+QVVGWPP+ R N +Q KS E + + S TV
Sbjct: 75 AQVVGWPPVRNYRKNVMANQ-KSGEAEEAM---SSGGGTVA------------------- 111
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
F+KV+MDG P RKVDL ++SY+ L++ L MF+ T GS G I
Sbjct: 112 ------FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTM-----GSYGAQGMID 160
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRL 264
F E L SS++V +YEDK+GDWMLVGDVPW MF S +RLRIM+ SEA GLAPR
Sbjct: 161 FMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRA 220
Query: 265 EEK 267
EK
Sbjct: 221 MEK 223
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 23/174 (13%)
Query: 84 PSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDK 143
P VVGWPP+ + R N ++ + SK N G N +D+ ++ K
Sbjct: 101 PGPVVGWPPVRSFRKNLASTSS------------SKLGNESSHGGQINKSDDGEKQVETK 148
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASI-TCKGSNGDDRG 202
+ F+K+NMDG PIGRKVDL+A++SYE L+ ++ +F A+ G+++
Sbjct: 149 KE---GMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKP 205
Query: 203 IIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSE 256
II LLDG +F LTYED EGD MLVGDVPW MF SV+RLR++++SE
Sbjct: 206 II-------GLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 99/184 (53%), Gaps = 33/184 (17%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+Q+VGWPP+ + R N+ + K+++ D R
Sbjct: 182 AQIVGWPPVRSYRKNTLATTCKNSDEVD------------------------------GR 211
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
+ F+KV+MDG P RKVDL ++++Y L+ LE MF +T ++ GSNG +
Sbjct: 212 PGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMF--TTFTLGQCGSNGAAGKDM 269
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRL 264
+ LL+G +VLTYEDK+GDWMLVGDVPW MF ++L+IM+ +A GLAPR
Sbjct: 270 LSETKLKDLLNGKD-YVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAPRA 328
Query: 265 EEKN 268
EK+
Sbjct: 329 MEKS 332
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 97/184 (52%), Gaps = 41/184 (22%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+QVVGWPP+ + R N S KS+ G E
Sbjct: 81 AQVVGWPPVRSYRKNVMVSCQKSS------------------GGPE-------------- 108
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
++ F+KV+MDG P RK+DL + SY+ L+ L +MF+ T G +G + G+I
Sbjct: 109 ---AAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTM-----GKHGGEEGMI 160
Query: 205 -FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPR 263
F ER L S +V +YEDK+GDWMLVGDVPW MF + +RLR+M+ S+A GLAPR
Sbjct: 161 DFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPR 220
Query: 264 LEEK 267
EK
Sbjct: 221 AMEK 224
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 101/197 (51%), Gaps = 30/197 (15%)
Query: 76 ESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDN 135
E +V +QVVGWPP+ + R N + Q +T A GND
Sbjct: 60 EKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTT------------------GDATEGNDK 101
Query: 136 SVINIKDKRH---IRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASIT 192
+ + + ++KV+MDG P RK+DL + +Y+ L+ L MF S+ +I
Sbjct: 102 TSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMF--SSFTIG 159
Query: 193 CKGSNGDDRGIIFGGERHSKLLD--GSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLR 250
G G + SKL+D S +V TYEDK+GDWMLVGDVPW MF S +R+R
Sbjct: 160 NYGPQGMKDFM-----NESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIR 214
Query: 251 IMRTSEANGLAPRLEEK 267
IM+ SEA GLAPR EK
Sbjct: 215 IMKGSEAIGLAPRALEK 231
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 35/186 (18%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+Q+VGWPP+ + R N+ + K+++ D R
Sbjct: 182 AQIVGWPPVRSYRKNTLATTCKNSDEVD------------------------------GR 211
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
+ F+KV+MDG P RKVDL ++++Y L+ LE MF +T ++ GSNG +
Sbjct: 212 PGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMF--TTFTLGQCGSNGAAGKDM 269
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGL--AP 262
+ LL+G +VLTYEDK+GDWMLVGDVPW MF ++L+IM+ +A GL AP
Sbjct: 270 LSETKLKDLLNGKD-YVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAP 328
Query: 263 RLEEKN 268
R EK+
Sbjct: 329 RAMEKS 334
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 36/186 (19%)
Query: 85 SQVVGWPPLPACRMNSF-NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDK 143
+QVVGWPP+ + R N+ +S +K+T+ D K V+
Sbjct: 164 AQVVGWPPIRSYRKNTMASSTSKNTDEVD-----GKPGLGVL------------------ 200
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNEST-ASITCKGSNGDDRG 202
F+KV+MDG P RKVDL ++SY+ L+ LE MF+ T G+ G +R
Sbjct: 201 -------FVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRER- 252
Query: 203 IIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
+ LL GS +FVLTYEDK+GDWMLVGDVPW +FT + ++L+IM+ S++ GLAP
Sbjct: 253 --MSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAP 309
Query: 263 RLEEKN 268
EK+
Sbjct: 310 GAVEKS 315
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 36/186 (19%)
Query: 85 SQVVGWPPLPACRMNSF-NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDK 143
+QVVGWPP+ + R N+ +S +K+T+ D K V+
Sbjct: 164 AQVVGWPPIRSYRKNTMASSTSKNTDEVD-----GKPGLGVL------------------ 200
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNEST-ASITCKGSNGDDRG 202
F+KV+MDG P RKVDL ++SY+ L+ LE MF+ T G+ G +R
Sbjct: 201 -------FVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRER- 252
Query: 203 IIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
+ LL GS +FVLTYEDK+GDWMLVGDVPW +FT + ++L+IM+ S++ GLAP
Sbjct: 253 --MSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAP 309
Query: 263 RLEEKN 268
EK+
Sbjct: 310 GAVEKS 315
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 36/186 (19%)
Query: 85 SQVVGWPPLPACRMNSF-NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDK 143
+QVVGWPP+ + R N+ +S +K+T+ D K V+
Sbjct: 181 AQVVGWPPIRSYRKNTMASSTSKNTDEVD-----GKPGLGVL------------------ 217
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNEST-ASITCKGSNGDDRG 202
F+KV+MDG P RKVDL ++SY+ L+ LE MF+ T G+ G +R
Sbjct: 218 -------FVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRER- 269
Query: 203 IIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
+ LL GS +FVLTYEDK+GDWMLVGDVPW +FT + ++L+IM+ S++ GLAP
Sbjct: 270 --MSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAP 326
Query: 263 RLEEKN 268
EK+
Sbjct: 327 GAVEKS 332
>AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=319
Length = 319
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 101/186 (54%), Gaps = 36/186 (19%)
Query: 85 SQVVGWPPLPACRMNSF-NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDK 143
+QVVGWPP+ + R N+ +S +K+T+ D K V+
Sbjct: 164 AQVVGWPPIRSYRKNTMASSTSKNTDEVD-----GKPGLGVL------------------ 200
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNEST-ASITCKGSNGDDRG 202
F+KV+MDG P RKVDL ++SY+ L+ LE MF+ T G+ G +R
Sbjct: 201 -------FVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRER- 252
Query: 203 IIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
+ LL GS +FVLTYEDK+GDWMLVGDVPW +FT + ++L+IM+ S++ GL
Sbjct: 253 --MSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLGA 309
Query: 263 RLEEKN 268
+ KN
Sbjct: 310 VEKSKN 315
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 81/179 (45%), Gaps = 53/179 (29%)
Query: 83 RPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKD 142
R +Q+VGWPP+ + R N+ S+ +E
Sbjct: 61 RKAQIVGWPPVRSYRKNNIQSKKNESE--------------------------------- 87
Query: 143 KRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRG 202
H ++KV+MDG P RK+DLS + Y L + LE MF S
Sbjct: 88 --HEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSV-------------- 131
Query: 203 IIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLA 261
GE + S FV TYEDK+GDWML+GDVPW MF + +RLRIM+ SEA GL
Sbjct: 132 ----GEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLG 186
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 80/177 (45%), Gaps = 55/177 (31%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+Q+VGWPP+ + R NN +K G N
Sbjct: 61 AQIVGWPPVRSYR----------------------KNNVQTKKSESEGQGN--------- 89
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
++KV+MDG P RK+DL+ + Y L ++LE+MF S
Sbjct: 90 ------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSV---------------- 127
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLA 261
GE + S FV TYEDK+GDWMLVGDVPW MF S +RLRIM+ SE GL
Sbjct: 128 --GEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 68/119 (57%), Gaps = 26/119 (21%)
Query: 139 NIKDKRHIR----SSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCK 194
+K +R +R +S F+KV M+G PIGRK+DL S YE+L E L MF+ SI C
Sbjct: 58 TLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFD---TSIIC- 113
Query: 195 GSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMR 253
G R K VLTYEDK+GDWM+VGD+PW MF +VRRL+I R
Sbjct: 114 ------------GNRDRK------HHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 83/181 (45%), Gaps = 58/181 (32%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
SQVVGWPP+ + R + +A +T+V
Sbjct: 69 SQVVGWPPVCSYRKKNSCKEASTTKV---------------------------------- 94
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
++KV+MDG P RK+DL + Y+ LA L+ +F + K +GD+
Sbjct: 95 ---GLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALK--DGDN---- 145
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEAN--GLAP 262
++V YEDK+GDWML GDVPWGMF S +RLRIM+ S+A GL P
Sbjct: 146 -------------CEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQP 192
Query: 263 R 263
R
Sbjct: 193 R 193
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 80/176 (45%), Gaps = 64/176 (36%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+Q+VGWPP+ + R K+NN+V
Sbjct: 59 TQIVGWPPVRSSR---------------------KNNNSV-------------------- 77
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
++KV+MDG P RK+DL + +Y L + LE+MF +
Sbjct: 78 -----SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFK------------------V 114
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGL 260
GE + S FV TYEDK+GDWMLVGDVPW MF+ S +RLRIM+ S+A L
Sbjct: 115 MIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 18/107 (16%)
Query: 151 FIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERH 210
++KV+MDG P RK+DL + +Y L + LE+MF + GE
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTV------------------GEYS 117
Query: 211 SKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEA 257
+ S FV TYEDK+GDWMLVGDVPW MF+ S ++LRIM+ SEA
Sbjct: 118 EREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 24/113 (21%)
Query: 151 FIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERH 210
++K+NM+G PIGRKV+LSA+++Y+ L+ ++ +F++ +
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDS--------------------- 120
Query: 211 SKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPR 263
D + ++ L YED EGD +LVGDVPW MF +V+RL +++TS A L+PR
Sbjct: 121 ---WDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
>AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241375 FORWARD
LENGTH=173
Length = 173
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 25/143 (17%)
Query: 47 ARIFTAKDFXXXXXXXXXXNVAAGTKRAAESL----VATNRPSQVVGWPPLPACRMNSF- 101
RI TAKDF + G+KR+AES + R SQVVGWPP+ RMNS
Sbjct: 37 GRILTAKDFP-----------SVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLV 85
Query: 102 NSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPI 161
N+QA AE+ VV+ ++ +++K ++ F+KVNMDG I
Sbjct: 86 NNQAMKA----ARAEEGDGEKKVVKN-----DELKDVSMKVNPKVQGLGFVKVNMDGVGI 136
Query: 162 GRKVDLSAHSSYETLAETLEDMF 184
GRKVD+ AHSSYE LA+TLE+MF
Sbjct: 137 GRKVDMRAHSSYENLAQTLEEMF 159
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 18/105 (17%)
Query: 149 SPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGE 208
S ++KVNM+G PIGRK+DL + + Y L TL+ MFN S I++ E
Sbjct: 82 SFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNAS---------------ILWAEE 126
Query: 209 RHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMR 253
+ VLTY DKEGDWM+VGDVPW MF SVRRL+I R
Sbjct: 127 ED---MCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 18/105 (17%)
Query: 149 SPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGE 208
S ++KVNM+G PIGRK+DL + + Y L TL+ MFN S I++ E
Sbjct: 84 SFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNAS---------------ILWAEE 128
Query: 209 RHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMR 253
+ VLTY DKEGDWM+VGDVPW MF +VRRL+I R
Sbjct: 129 ED---MCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISR 170
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 60/177 (33%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
SQ VGWPP+ + R N +A
Sbjct: 69 SQAVGWPPVCSYRRKKNNEEAS-------------------------------------- 90
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
++ ++KV+MDG P RK+DL + +SY L LE++F C G
Sbjct: 91 --KAIGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFG-------CLG--------- 132
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLA 261
G + K ++++ YEDK+ DWMLVGDVPW MF S +RLRI++ S+A G
Sbjct: 133 IGVAKEGK----KCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGFG 185
>AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196214 FORWARD LENGTH=210
Length = 210
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 75/155 (48%), Gaps = 26/155 (16%)
Query: 85 SQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSVINIKDKR 144
+QVVGWPP+ R N Q S+ + +EK+ +
Sbjct: 81 AQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGG--------------------- 119
Query: 145 HIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGII 204
+ +KV+MDG P RKVDL + SY+ L++ L MF+ T G+ G I
Sbjct: 120 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM-----GNYGAQGMID 174
Query: 205 FGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPW 239
F E L SS++V +YEDK+GDWMLVGDVPW
Sbjct: 175 FMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPW 209
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 18/110 (16%)
Query: 151 FIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERH 210
++KV +DG RKVDL + Y L LE+MF + +I C+ + + +G
Sbjct: 88 YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF-QGIITI-CRVTELERKG-------- 137
Query: 211 SKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGL 260
+FV TYEDK+GD MLVGDVPW MF S +R+R+M+T +A GL
Sbjct: 138 --------EFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 82/196 (41%), Gaps = 68/196 (34%)
Query: 69 AGTKRAAESL-----VATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNT 123
+G KRA+ + + SQVVGWPP+ C NS E++KS+
Sbjct: 31 SGKKRASPEVEIDLKCEPAKKSQVVGWPPV--CSYRRKNS-----------LERTKSS-- 75
Query: 124 VVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDM 183
++KV++DG RK+DL + Y+ LA L+
Sbjct: 76 ---------------------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQ-- 106
Query: 184 FNESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFT 243
I+FG + S+ V YEDK+GDWML GDVPW MF
Sbjct: 107 -------------------ILFGCYINFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFL 147
Query: 244 GSVRRLRIMRTSEANG 259
GS +RLRIM+ S G
Sbjct: 148 GSCKRLRIMKRSCNRG 163
>AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34 |
chr1:5182256-5183243 REVERSE LENGTH=185
Length = 185
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 147 RSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFG 206
R ++KV MDG +GRKV + H SY TLA LEDMF + S G+
Sbjct: 90 RKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVS-----------GL--- 135
Query: 207 GERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEA 257
+L S+F L Y D+EG W GDVPW F SV RLRI R ++A
Sbjct: 136 -----RLFQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDA 181
>AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32 |
chr2:118385-119219 FORWARD LENGTH=191
Length = 191
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 56/107 (52%), Gaps = 19/107 (17%)
Query: 151 FIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERH 210
++KVN+DG +GRKV L +Y TLA L DMF T S G+
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVS-----------GL------- 141
Query: 211 SKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEA 257
+L S+F L Y D+EG W VGDVPW F SV R+RI R ++A
Sbjct: 142 -RLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDA 187
>AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29 |
chr4:15583479-15584628 FORWARD LENGTH=251
Length = 251
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 85 SQVVGWPPLPAC--RMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKGAENGNDNSV-INIK 141
S+VVGWPP+ C + S++ + P + + T + N +V +
Sbjct: 93 SEVVGWPPVKTCMIKYGSYHHRHIRNHHHCPYHHRGR-RITAMNNNISNPTTATVGSSSS 151
Query: 142 DKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDR 201
RSS ++KV MDG I RKVD+ +SYE+L +L MF E DR
Sbjct: 152 SSISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDC---------DR 202
Query: 202 GIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMR 253
+ + T++ KEGDW+L GDV W +F SV R+ I+R
Sbjct: 203 --------------EDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 25/120 (20%)
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGI 203
R IRS KV+M G+ +GR +DL+ YE L + LE+MF D +G
Sbjct: 534 RQIRSC--TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF--------------DIKG- 576
Query: 204 IFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPR 263
+LL+ + K+ + Y D E D M+VGD PW F G VR++ I E L+P+
Sbjct: 577 --------ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 628
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 25/120 (20%)
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGI 203
R IRS KV+M G+ +GR +DL+ YE L + LE+MF D +G
Sbjct: 539 RQIRSC--TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF--------------DIKG- 581
Query: 204 IFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPR 263
+LL+ + K+ + Y D E D M+VGD PW F G VR++ I E L+P+
Sbjct: 582 --------ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 633
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 25/120 (20%)
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGI 203
R IRS KV+M G+ +GR +DL+ YE L + LE+MF D +G
Sbjct: 539 RQIRSC--TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF--------------DIKG- 581
Query: 204 IFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPR 263
+LL+ + K+ + Y D E D M+VGD PW F G VR++ I E L+P+
Sbjct: 582 --------ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 633
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 25/120 (20%)
Query: 144 RHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGI 203
R IRS KV+M G+ +GR +DL+ YE L + LE+MF D +G
Sbjct: 536 RQIRSC--TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF--------------DIKG- 578
Query: 204 IFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPR 263
+LL+ + K+ + Y D E D M+VGD PW F G VR++ I E L+P+
Sbjct: 579 --------ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 630
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 112 DPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHS 171
DP +E SK + ++ AE S ++ K+ + KV M G P+GR VDL+A
Sbjct: 488 DPKSEISKVSEEKKQEPAEG----SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALK 543
Query: 172 SYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDW 231
Y L + +E +F+ GE S+ +++ + + D EGD
Sbjct: 544 GYNELIDDIEKLFD-------------------IKGELRSR-----NQWEIVFTDDEGDM 579
Query: 232 MLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
MLVGD PW F V+R+ I E + P
Sbjct: 580 MLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 610
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 112 DPVAEKSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHS 171
DP +E SK + ++ AE S ++ K+ + KV M G P+GR VDL+A
Sbjct: 490 DPKSEISKVSEEKKQEPAEG----SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALK 545
Query: 172 SYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDW 231
Y L + +E +F+ GE S+ +++ + + D EGD
Sbjct: 546 GYNELIDDIEKLFD-------------------IKGELRSR-----NQWEIVFTDDEGDM 581
Query: 232 MLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
MLVGD PW F V+R+ I E + P
Sbjct: 582 MLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 612
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 30/196 (15%)
Query: 69 AGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKG 128
A + + +S+ ++ ++ P +CR+ F+ +K P ++ S ++ +
Sbjct: 408 ATERNSNKSVFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDS 467
Query: 129 AENGND----NSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMF 184
D NS K + RS IKV M GT +GR VDL+ SY+ L + LE MF
Sbjct: 468 TTKCQDPNSSNSPKEQKQQTSTRSR--IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 525
Query: 185 NESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTG 244
GE L K+ + + D EGD MLVGD PW F
Sbjct: 526 E-------------------IEGE-----LSPKDKWAIVFTDDEGDRMLVGDDPWNEFCK 561
Query: 245 SVRRLRIMRTSEANGL 260
++L I + E +
Sbjct: 562 MAKKLFIYPSDEVKKM 577
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 30/196 (15%)
Query: 69 AGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKG 128
A + + +S+ ++ ++ P +CR+ F+ +K P ++ S ++ +
Sbjct: 321 ATERNSNKSVFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDS 380
Query: 129 AENGND----NSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMF 184
D NS K + RS IKV M GT +GR VDL+ SY+ L + LE MF
Sbjct: 381 TTKCQDPNSSNSPKEQKQQTSTRSR--IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 438
Query: 185 NESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTG 244
GE L K+ + + D EGD MLVGD PW F
Sbjct: 439 E-------------------IEGE-----LSPKDKWAIVFTDDEGDRMLVGDDPWNEFCK 474
Query: 245 SVRRLRIMRTSEANGL 260
++L I + E +
Sbjct: 475 MAKKLFIYPSDEVKKM 490
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 30/196 (15%)
Query: 69 AGTKRAAESLVATNRPSQVVGWPPLPACRMNSFNSQAKSTEVFDPVAEKSKSNNTVVRKG 128
A + + +S+ ++ ++ P +CR+ F+ +K P ++ S ++ +
Sbjct: 429 ATERNSNKSVFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDS 488
Query: 129 AENGND----NSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMF 184
D NS K + RS IKV M GT +GR VDL+ SY+ L + LE MF
Sbjct: 489 TTKCQDPNSSNSPKEQKQQTSTRSR--IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 546
Query: 185 NESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTG 244
GE L K+ + + D EGD MLVGD PW F
Sbjct: 547 E-------------------IEGE-----LSPKDKWAIVFTDDEGDRMLVGDDPWNEFCK 582
Query: 245 SVRRLRIMRTSEANGL 260
++L I + E +
Sbjct: 583 MAKKLFIYPSDEVKKM 598
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 24/117 (20%)
Query: 153 KVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHSK 212
KV M G +GR VDL+ SY+ L + LE+MF E +
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMF-----------------------EIQGQ 529
Query: 213 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAPRLEEKNS 269
LL K+++ + D EGD ML GD PW F +++ I + E + +L+ +S
Sbjct: 530 LL-ARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISSS 585
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 30/171 (17%)
Query: 99 NSFNSQAKSTEVFDPVAEK-------SKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPF 151
N+ N A T++ P + SKS N +G +N + S
Sbjct: 676 NNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC 735
Query: 152 IKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHS 211
KV+ G +GR VDLS +YE L L+ +F F GE
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-------------------FNGE--- 773
Query: 212 KLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
L+ +++ Y D+E D MLVGD PW F VR++ I E + P
Sbjct: 774 -LMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 30/171 (17%)
Query: 99 NSFNSQAKSTEVFDPVAEK-------SKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPF 151
N+ N A T++ P + SKS N +G +N + S
Sbjct: 676 NNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC 735
Query: 152 IKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHS 211
KV+ G +GR VDLS +YE L L+ +F F GE
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-------------------FNGE--- 773
Query: 212 KLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
L+ +++ Y D+E D MLVGD PW F VR++ I E + P
Sbjct: 774 -LMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 30/171 (17%)
Query: 99 NSFNSQAKSTEVFDPVAEK-------SKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPF 151
N+ N A T++ P + SKS N +G +N + S
Sbjct: 676 NNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC 735
Query: 152 IKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHS 211
KV+ G +GR VDLS +YE L L+ +F F GE
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-------------------FNGE--- 773
Query: 212 KLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
L+ +++ Y D+E D MLVGD PW F VR++ I E + P
Sbjct: 774 -LMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 30/171 (17%)
Query: 99 NSFNSQAKSTEVFDPVAEK-------SKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPF 151
N+ N A T++ P + SKS N +G +N + S
Sbjct: 676 NNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSC 735
Query: 152 IKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHS 211
KV+ G +GR VDLS +YE L L+ +F F GE
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-------------------FNGE--- 773
Query: 212 KLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANGLAP 262
L+ +++ Y D+E D MLVGD PW F VR++ I E + P
Sbjct: 774 -LMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 126 RKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFN 185
+K ++ S I I+ K+ S KV M G IGR VDLS + Y+ L LE +F+
Sbjct: 488 KKFGQSQTLRSPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 547
Query: 186 ESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGS 245
KG L +++ + + D +G MLVGD PW F
Sbjct: 548 -------IKGQ-----------------LQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKM 583
Query: 246 VRRLRIMRTSEA 257
V+++ I E
Sbjct: 584 VKKILIYSKEEV 595
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 28/149 (18%)
Query: 112 DPVAEKSKSNNTVVRKGAENGNDNSV---INIKDKRHIRSSPFIKVNMDGTPIGRKVDLS 168
DP+ E+ S+ + + +G + G ++ I I+ K+ + KV M G IGR VDLS
Sbjct: 456 DPI-EEIGSDISKLTEGKKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLS 514
Query: 169 AHSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKE 228
+ Y+ L LE +F+ KG L +++ + + D +
Sbjct: 515 VLNGYDQLILELEKLFD-------LKGQ-----------------LQTRNQWKIAFTDSD 550
Query: 229 GDWMLVGDVPWGMFTGSVRRLRIMRTSEA 257
G MLVGD PW F V+++ I E
Sbjct: 551 GYEMLVGDDPWPEFCKMVKKILIYSKEEV 579
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 140 IKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGD 199
I++K+ S KV M G IGR VDLS + Y+ L LE +F+ KG
Sbjct: 502 IQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-------IKGQ--- 551
Query: 200 DRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMR 253
L +++ + + D + D MLVGD PW F V+++ I +
Sbjct: 552 --------------LQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFIQK 591
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 140 IKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSNGD 199
I+ K+ + KV M G IGR VDLS + Y+ L LE +F+ KG
Sbjct: 501 IQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-------LKGQ--- 550
Query: 200 DRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIMRTSEANG 259
L +++ + + + E D MLVG+ PW F V+++ I E
Sbjct: 551 --------------LQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKN 596
Query: 260 LAPR 263
L R
Sbjct: 597 LKSR 600
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 112 DPVAE--KSKSNNTVVRKGAENGNDNSVINIKDKRHIRSSPFIKVNMDGTPIGRKVDLSA 169
DP+ E S T +K ++ S I+ K+ + KV M G I R VDLS
Sbjct: 470 DPIEEIGSEISKLTEGKKFGQSQTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSV 529
Query: 170 HSSYETLAETLEDMFNESTASITCKGSNGDDRGIIFGGERHSKLLDGSSKFVLTYEDKEG 229
+ Y+ L LE++F+ KG L +++ + + D +
Sbjct: 530 LNGYDQLILELEELFD-------LKGQ-----------------LQTRNQWEIAFTDSDD 565
Query: 230 DWMLVGDVPWGMFTGSVRRLRIMR 253
D MLVGD PW F V+++ I +
Sbjct: 566 DKMLVGDDPWPEFCNMVKKILIFK 589
>AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33 |
chr5:23270024-23270959 FORWARD LENGTH=171
Length = 171
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 138 INIKDKRHIRSSPFIKVNMDGTPIGRKVDLSAHSSYETLAETLEDMFNESTASITCKGSN 197
+N++D P + V ++G I +++ L H SY++LA L MF + S
Sbjct: 61 LNVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADST------ 114
Query: 198 GDDRGIIFGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFTGSVRRLRIM 252
DD + S + G ++ YED E D +L GD+ W F +R+RI+
Sbjct: 115 -DDLDL-------SNAIPGH---LIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158