Miyakogusa Predicted Gene
- Lj0g3v0342589.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0342589.2 Non Chatacterized Hit- tr|I1MC56|I1MC56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48993
PE,78.52,0,Auxin_resp,Auxin response factor; AUX_IAA,AUX/IAA protein;
B3,B3 DNA binding domain; FAMILY NOT NAME,CUFF.23484.2
(958 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 939 0.0
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 509 e-144
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 508 e-144
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 506 e-143
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 501 e-142
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 497 e-140
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 496 e-140
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 488 e-137
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 487 e-137
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 375 e-103
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 375 e-103
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 375 e-103
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 374 e-103
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 352 5e-97
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 352 7e-97
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 352 8e-97
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 352 8e-97
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 342 7e-94
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 342 1e-93
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 341 1e-93
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 334 1e-91
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 333 3e-91
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 333 4e-91
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 319 6e-87
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 288 1e-77
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 288 1e-77
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 281 1e-75
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 280 5e-75
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 277 3e-74
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 270 3e-72
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 266 7e-71
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 263 3e-70
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 261 1e-69
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 255 1e-67
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 245 1e-64
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 244 2e-64
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 211 2e-54
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 164 3e-40
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 62 2e-09
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 62 2e-09
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 62 3e-09
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 61 4e-09
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 59 1e-08
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 59 2e-08
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 58 2e-08
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 58 3e-08
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 58 3e-08
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 58 4e-08
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 57 4e-08
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 57 5e-08
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 57 7e-08
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 57 8e-08
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 57 9e-08
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 56 1e-07
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 56 2e-07
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 55 2e-07
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 55 2e-07
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 2e-07
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 2e-07
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 2e-07
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 54 4e-07
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 54 6e-07
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 54 7e-07
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 54 8e-07
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 54 8e-07
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 54 8e-07
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 53 9e-07
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 53 1e-06
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 52 2e-06
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 50 5e-06
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 50 6e-06
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/914 (57%), Positives = 612/914 (66%), Gaps = 89/914 (9%)
Query: 72 SGVRR-TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQ 130
SG R+ +NSELWHACAGPLV LPQVGSLVYYF QGHSEQVA STRR+AT+Q+PNYP+L
Sbjct: 44 SGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLP 103
Query: 131 SQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGT-KQSKHPSEFFCKTLT 189
SQL+CQV NVTLHADK++DEIYAQMSLQPV+SE++VFP+ DFG + SKHP+EFFCKTLT
Sbjct: 104 SQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLT 163
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTSTHGGFSVPRRAAEKLFP LDY+ QPPTQELVVRDLH+NTWTFRHIYRGQPKRHLL
Sbjct: 164 ASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 223
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXX 309
TTGWSLFVGSKRLRAGDSVLFIRDE SQL VGVRRANRQQT LPSSVLSADSMHIGVL
Sbjct: 224 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 283
Query: 310 XXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRY 369
NR+PF IFYNPRACP+EFVIPLAKYRKA+ SQLSVGMRFGMMFETE+SGKRRY
Sbjct: 284 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 343
Query: 370 MGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSL 429
MGTIVGI+D+DPLRWPGSKWRN+QVEWDEPGC DK RVS WDIETPESLFIFPSLTS L
Sbjct: 344 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTSGL 403
Query: 430 KRPLQSGLL--ENEWGTLLRKPFIKAPES--GAMELSSSIPNLYQEQLMKMLFKPQAVNN 485
KR L E EWG+L+++P I+ P+S G M +S P++ EQLMKM+ +P N
Sbjct: 404 KRQLHPSYFAGETEWGSLIKRPLIRVPDSANGIMPY-ASFPSMASEQLMKMMMRPHNNQN 462
Query: 486 NGAFPSLMQQESAATRGPLQVDNQNVHLASTGSMTLKNPCXXXXXXXXTTLLKSDQPEKL 545
+F S MQQ G L G M ++ P L+ + + E +
Sbjct: 463 VPSFMSEMQQNIVMGNGGL-----------LGDMKMQQP-----------LMMNQKSEMV 500
Query: 546 HPQPRIDNHLTSGTVTDNKSRLESEVLDHVLDFPS------MEGCKIEKMVTNPINPQNL 599
PQ N LT N S E + L + P+ + GC ++
Sbjct: 501 QPQ----NKLTVNPSASNTSGQE-QNLSQSMSAPAKPENSTLSGCSSGRVQHGLEQSMEQ 555
Query: 600 ASHLTIXXXXXXXXXXXSSTWPMQHTQLESSLSYPQVIDMS----QSDSAIVNGTLPQLD 655
AS +T +Q S + Q +D++ Q S +NG L+
Sbjct: 556 ASQVTTSTVCNEEKVNQL----LQKPGASSPVQADQCLDITHQIYQPQSDPING-FSFLE 610
Query: 656 IEEWMA-YSSCQPFAGQNRSNGPFSDFQEHASLQAQVVNNPSLTSTNQEVLDHYVKNLKF 714
+E + SS Q AG + S A + N+P +V D + LKF
Sbjct: 611 TDELTSQVSSFQSLAGSYKQPFILSSQDSSAVVLPDSTNSPLF----HDVWDTQLNGLKF 666
Query: 715 FSQADQLTSIYGFNGISSSNNLRDLSSESNNQSEICXXXXXXXXXXXXXXXXXXXXXXIL 774
DQ + + + +S N S+ SN +L
Sbjct: 667 ----DQFSPLMQQDLYASQNICMSNSTTSN-------------------ILDPPLSNTVL 703
Query: 775 DEFCTMKERDFQ-HPQECMVG--NLSCSQDGQSQITSASLAESHAFCLR---DNSG--GT 826
D+FC +K+ DFQ HP C+VG N S +QD QSQITSAS A+S AF + DNSG GT
Sbjct: 704 DDFCAIKDTDFQNHPSGCLVGNNNTSFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGT 763
Query: 827 SSSHVDFDDSSLLQN---NSWQQGSTP-IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAI 882
SSS+VDFDD SL QN +SWQ+ +TP +RTYTKVQK GSVGRSIDVT+FK+YEEL AI
Sbjct: 764 SSSNVDFDDCSLRQNSKGSSWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAI 823
Query: 883 ECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSE 942
ECMFGL+GLL + SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSP+EVQQMSE
Sbjct: 824 ECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSE 883
Query: 943 EGMKLLNSGALQGI 956
EGMKLLNS + +
Sbjct: 884 EGMKLLNSAGINDL 897
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 509 bits (1311), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/416 (60%), Positives = 305/416 (73%), Gaps = 15/416 (3%)
Query: 72 SGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQS 131
+G +R LNSELWHACAGPLVSLP VGS V YFPQGHSEQVAAST + + IPNYPSL
Sbjct: 16 TGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHP 75
Query: 132 QLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPI--SDFGTKQSKHPSEFFCKTLT 189
QL+CQ+ NVT+HAD ETDE+YAQM+LQP+N++++ P ++ G S+ P+ +FCKTLT
Sbjct: 76 QLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVP-SRQPTNYFCKTLT 134
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTSTHGGFSVPRRAAEK+FP LDY+ QPP QEL+ RDLHDN W FRHI+RGQPKRHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXX 309
TTGWS+FV +KRL AGDSVLFI ++ +QL +G+RRANR QT +PSSVLS+DSMH+G+L
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 254
Query: 310 XXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRY 369
S FTIFYNPRA PSEFVIPLAKY KAVY +++SVGMRF M+FETEES RRY
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 370 MGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPS-LTSS 428
MGTI GI D+DP RW S WR+++V WDE G++Q RVS+W+IE + ++PS
Sbjct: 315 MGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLR 374
Query: 429 LKRPLQSGLLENEWGTLLRKPFIKAPESGAMELSSSIPNLYQEQLMKMLFKPQAVN 484
LKRP GL P + M +S S P ++ L + F+ VN
Sbjct: 375 LKRPWPPGL-----------PSFHGLKEDDMGMSMSSPLMWDRGLQSLNFQGMGVN 419
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 833 FDDSSLLQNNSWQQGSTP-IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGL 891
D+S LQ++ P T+ KV K+GS GRS+D++ F +Y EL + MFGL+G
Sbjct: 776 IDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQ 835
Query: 892 LNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSG 951
L D SGW+LV+VD E+DVLL+GDDPW EFV V CI+ILSP EVQQM + G++LLNS
Sbjct: 836 LEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSA 895
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/415 (60%), Positives = 304/415 (73%), Gaps = 15/415 (3%)
Query: 73 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 132
G +R LNSELWHACAGPLVSLP VGS V YFPQGHSEQVAAST + + IPNYPSL Q
Sbjct: 15 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 74
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPI--SDFGTKQSKHPSEFFCKTLTA 190
L+CQ+ NVT+HAD ETDE+YAQM+LQP+N++++ P ++ G S+ P+ +FCKTLTA
Sbjct: 75 LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVP-SRQPTNYFCKTLTA 133
Query: 191 SDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 250
SDTSTHGGFSVPRRAAEK+FP LDY+ QPP QEL+ RDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 193
Query: 251 TGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXX 310
TGWS+FV +KRL AGDSVLFI ++ +QL +G+RRANR QT +PSSVLS+DSMH+G+L
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253
Query: 311 XXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 370
S FTIFYNPRA PSEFVIPLAKY KAVY +++SVGMRF M+FETEES RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
Query: 371 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPS-LTSSL 429
GTI GI D+DP RW S WR+++V WDE G++Q RVS+W+IE + ++PS L
Sbjct: 314 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 373
Query: 430 KRPLQSGLLENEWGTLLRKPFIKAPESGAMELSSSIPNLYQEQLMKMLFKPQAVN 484
KRP GL P + M +S S P ++ L + F+ VN
Sbjct: 374 KRPWPPGL-----------PSFHGLKEDDMGMSMSSPLMWDRGLQSLNFQGMGVN 417
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 833 FDDSSLLQNNSWQQGSTP-IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGL 891
D+S LQ++ P T+ KV K+GS GRS+D++ F +Y EL + MFGL+G
Sbjct: 774 IDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQ 833
Query: 892 LNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSG 951
L D SGW+LV+VD E+DVLL+GDDPW EFV V CI+ILSP EVQQM + G++LLNS
Sbjct: 834 LEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSA 893
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/373 (66%), Positives = 300/373 (80%), Gaps = 8/373 (2%)
Query: 73 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 132
G ++ +NS+LWHACAGPLVSLP VGSLV YFPQGHSEQVAAS ++ T IPNYP+L S+
Sbjct: 15 GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ-TDFIPNYPNLPSK 73
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 191
L+C + +VTLHAD ETDE+YAQM+LQPVN ++E SD G K ++ P+EFFCKTLTAS
Sbjct: 74 LICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTAS 133
Query: 192 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 251
DTSTHGGFSVPRRAAEK+FP LD+++QPP QE+V +DLHD TWTFRHIYRGQPKRHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTT 193
Query: 252 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 311
GWS+FV +KRL AGDSVLF+RDE SQL +G+RRANRQ TL SSV+S+DSMHIG+L
Sbjct: 194 GWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAA 253
Query: 312 XXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMG 371
N SPFTIF+NPRA PSEFV+PLAKY KA+YA Q+S+GMRF MMFETE+ G RRYMG
Sbjct: 254 HANANSSPFTIFFNPRASPSEFVVPLAKYNKALYA-QVSLGMRFRMMFETEDCGVRRYMG 312
Query: 372 TIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTSS 428
T+ GI+D+DP+RW GS+WRN+QV WDE GD+ +RVS+W+IE TP +I P
Sbjct: 313 TVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP--FYICPPPFFR 370
Query: 429 LKRPLQSGLLENE 441
K P Q G+ ++E
Sbjct: 371 PKYPRQPGMPDDE 383
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 109/167 (65%), Gaps = 9/167 (5%)
Query: 782 ERDFQHPQECMVGNL-SCSQDGQSQITSASLAESHAFCLRD--NSGGTSSSHVDFDDSSL 838
++DFQ+ +V N + +D +++++SA+++ S +F + G S+ +DS +
Sbjct: 889 QKDFQN----LVPNYGNTPRDIETELSSAAIS-SQSFGIPSIPFKPGCSNEVGGINDSGI 943
Query: 839 LQNNS-WQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKG 897
+ W + +RTYTKVQK GSVGRSIDVT + Y+EL + MFG++G L D
Sbjct: 944 MNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLT 1003
Query: 898 SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 944
S WKLVY D+E+D+LLVGDDPWEEFV CV+ I+ILS EVQQMS +G
Sbjct: 1004 SDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDG 1050
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/438 (60%), Positives = 322/438 (73%), Gaps = 16/438 (3%)
Query: 73 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 132
G RR +NSELWHACAGPL+SLP GSLV YFPQGHSEQVAAS ++ T IP+YP+L S+
Sbjct: 16 GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQ-TDFIPSYPNLPSK 74
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 191
L+C + NVTL+AD ETDE+YAQM+LQPVN +++ SD G K ++ P+EFFCKTLTAS
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 192 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 251
DTSTHGGFSVPRRAAEK+FP LD+++QPP QELV +D+HDNTWTFRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 252 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 311
GWS+FV +KRL AGDSVLFIRD +QL +G+RRANRQQ L SSV+S+DSMHIGVL
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 312 XXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMG 371
N SPFTIFYNPRA P+EFV+PLAKY KA+YA Q+S+GMRF M+FETEE G RRYMG
Sbjct: 255 HANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYMG 313
Query: 372 TIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTSS 428
T+ GI+D+DP+RW S+WRN+Q+ WDE GD+ +RVSVWDIE TP +I P
Sbjct: 314 TVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFFR 371
Query: 429 LKRPLQSGLLENE--WGTLLRKPFIKAPESGAMELSSS--IPNLYQEQLMKMLFK----P 480
+ Q G+ ++E + L++ S M+ SS P L Q M M + P
Sbjct: 372 PRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLP 431
Query: 481 QAVNNNGAFPSLMQQESA 498
A G FPS++ +A
Sbjct: 432 SAAAQPGFFPSMLSPTAA 449
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 828 SSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFG 887
S+ + +D+ +L W + +RTYTKVQK GSVGRSIDV ++ Y+EL + MFG
Sbjct: 1013 SNDLAVNDAGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFG 1072
Query: 888 LDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 944
++G L D + S WKLVYVD+E+D+LLVGDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 1073 IEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1129
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/439 (59%), Positives = 322/439 (73%), Gaps = 17/439 (3%)
Query: 73 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 132
G RR +NSELWHACAGPL+SLP GSLV YFPQGHSEQVAAS ++ T IP+YP+L S+
Sbjct: 16 GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQ-TDFIPSYPNLPSK 74
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 191
L+C + NVTL+AD ETDE+YAQM+LQPVN +++ SD G K ++ P+EFFCKTLTAS
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 192 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 251
DTSTHGGFSVPRRAAEK+FP LD+++QPP QELV +D+HDNTWTFRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 252 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 311
GWS+FV +KRL AGDSVLFIRD +QL +G+RRANRQQ L SSV+S+DSMHIGVL
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 312 XXXXNRSPFTIFYNPR-ACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 370
N SPFTIFYNPR A P+EFV+PLAKY KA+YA Q+S+GMRF M+FETEE G RRYM
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYM 313
Query: 371 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTS 427
GT+ GI+D+DP+RW S+WRN+Q+ WDE GD+ +RVSVWDIE TP +I P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFF 371
Query: 428 SLKRPLQSGLLENE--WGTLLRKPFIKAPESGAMELSSS--IPNLYQEQLMKMLFK---- 479
+ Q G+ ++E + L++ S M+ SS P L Q M M +
Sbjct: 372 RPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQL 431
Query: 480 PQAVNNNGAFPSLMQQESA 498
P A G FPS++ +A
Sbjct: 432 PSAAAQPGFFPSMLSPTAA 450
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 828 SSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFG 887
S+ + +D+ +L W + +RTYTKVQK GSVGRSIDV ++ Y+EL + MFG
Sbjct: 1014 SNDLAVNDAGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFG 1073
Query: 888 LDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 944
++G L D + S WKLVYVD+E+D+LLVGDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 1074 IEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1130
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/439 (59%), Positives = 322/439 (73%), Gaps = 17/439 (3%)
Query: 73 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 132
G RR +NSELWHACAGPL+SLP GSLV YFPQGHSEQVAAS ++ T IP+YP+L S+
Sbjct: 16 GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQ-TDFIPSYPNLPSK 74
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 191
L+C + NVTL+AD ETDE+YAQM+LQPVN +++ SD G K ++ P+EFFCKTLTAS
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 192 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 251
DTSTHGGFSVPRRAAEK+FP LD+++QPP QELV +D+HDNTWTFRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 252 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 311
GWS+FV +KRL AGDSVLFIRD +QL +G+RRANRQQ L SSV+S+DSMHIGVL
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 312 XXXXNRSPFTIFYNPR-ACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 370
N SPFTIFYNPR A P+EFV+PLAKY KA+YA Q+S+GMRF M+FETEE G RRYM
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYM 313
Query: 371 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTS 427
GT+ GI+D+DP+RW S+WRN+Q+ WDE GD+ +RVSVWDIE TP +I P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFF 371
Query: 428 SLKRPLQSGLLENE--WGTLLRKPFIKAPESGAMELSSS--IPNLYQEQLMKMLFK---- 479
+ Q G+ ++E + L++ S M+ SS P L Q M M +
Sbjct: 372 RPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQL 431
Query: 480 PQAVNNNGAFPSLMQQESA 498
P A G FPS++ +A
Sbjct: 432 PSAAAQPGFFPSMLSPTAA 450
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 828 SSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFG 887
S+ + +D+ +L W + +RTYTKVQK GSVGRSIDV ++ Y+EL + MFG
Sbjct: 1014 SNDLAVNDAGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFG 1073
Query: 888 LDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 944
++G L D + S WKLVYVD+E+D+LLVGDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 1074 IEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1130
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/364 (64%), Positives = 282/364 (77%), Gaps = 4/364 (1%)
Query: 76 RTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLC 135
+ LNSELWHACAGPLVSLP GS V YFPQGHSEQVAA+T + IPNYPSL QL+C
Sbjct: 17 KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76
Query: 136 QVQNVTLHADKETDEIYAQMSLQPVNSE--KEVFPISDFGTKQSKHPSEFFCKTLTASDT 193
Q+ NVT+HAD ETDE+YAQM+LQP+ E KE F + G SK PS +FCKTLTASDT
Sbjct: 77 QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP-SKQPSNYFCKTLTASDT 135
Query: 194 STHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGW 253
STHGGFSVPRRAAEK+FP LDYT+QPP QEL+ RDLHD W FRHI+RGQPKRHLLTTGW
Sbjct: 136 STHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 195
Query: 254 SLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXX 313
S+FV +KRL AGDSV+FIR+E +QL +G+R A R QT +PSSVLS+DSMHIG+L
Sbjct: 196 SVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHA 255
Query: 314 XXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTI 373
S FT+F++PRA SEFVI L+KY KAV+ +++SVGMRF M+FETEES RRYMGTI
Sbjct: 256 SATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 315
Query: 374 VGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTS-SLKRP 432
GI+D+D +RWP S WR+++V WDE G++Q RVS+W+IE + ++PSL LKRP
Sbjct: 316 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 375
Query: 433 LQSG 436
+G
Sbjct: 376 WHAG 379
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 807 TSASLAESHAFCLRDNSGGTSSSHVDFDDSS--LLQNNSWQQGSTPIRTYTKVQKAGSVG 864
+S+ AE+ L D SG +S + D++ LL S + + KV K+GSVG
Sbjct: 659 SSSGDAEASPMSLTD-SGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVG 717
Query: 865 RSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVG 924
RS+D++ F +Y EL + MF ++GLL D SGW+LV+VD E+D+LL+GDDPWE FV
Sbjct: 718 RSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVN 777
Query: 925 CVRCIRILSPSEVQQMSEEG 944
V I+ILSP +V QM + G
Sbjct: 778 NVWYIKILSPEDVHQMGDHG 797
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/364 (64%), Positives = 282/364 (77%), Gaps = 4/364 (1%)
Query: 76 RTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLC 135
+ LNSELWHACAGPLVSLP GS V YFPQGHSEQVAA+T + IPNYPSL QL+C
Sbjct: 17 KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76
Query: 136 QVQNVTLHADKETDEIYAQMSLQPVNSE--KEVFPISDFGTKQSKHPSEFFCKTLTASDT 193
Q+ NVT+HAD ETDE+YAQM+LQP+ E KE F + G SK PS +FCKTLTASDT
Sbjct: 77 QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP-SKQPSNYFCKTLTASDT 135
Query: 194 STHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGW 253
STHGGFSVPRRAAEK+FP LDYT+QPP QEL+ RDLHD W FRHI+RGQPKRHLLTTGW
Sbjct: 136 STHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 195
Query: 254 SLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXX 313
S+FV +KRL AGDSV+FIR+E +QL +G+R A R QT +PSSVLS+DSMHIG+L
Sbjct: 196 SVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHA 255
Query: 314 XXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTI 373
S FT+F++PRA SEFVI L+KY KAV+ +++SVGMRF M+FETEES RRYMGTI
Sbjct: 256 SATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 315
Query: 374 VGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTS-SLKRP 432
GI+D+D +RWP S WR+++V WDE G++Q RVS+W+IE + ++PSL LKRP
Sbjct: 316 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 375
Query: 433 LQSG 436
+G
Sbjct: 376 WHAG 379
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 807 TSASLAESHAFCLRDNSGGTSSSHVDFDDSS--LLQNNSWQQGSTPIRTYTKVQKAGSVG 864
+S+ AE+ L D SG +S + D++ LL S + + KV K+GSVG
Sbjct: 659 SSSGDAEASPMSLTD-SGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVG 717
Query: 865 RSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWE 920
RS+D++ F +Y EL + MF ++GLL D SGW+LV+VD E+D+LL+GDDPWE
Sbjct: 718 RSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWE 773
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 236/346 (68%), Gaps = 17/346 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV++P+ V+YFPQGH EQV AST + A Q+P Y L S+LLC+
Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115
Query: 137 VQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPISDFGTKQSKHPSEFFCKTL 188
V NV L A+ +TDE+YAQ++L P + E + P F FCKTL
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHS-------FCKTL 168
Query: 189 TASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 248
TASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH N W FRHI+RGQP+RHL
Sbjct: 169 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHL 228
Query: 249 LTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLX 308
L +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ +PSSV+S+ SMH+GVL
Sbjct: 229 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 288
Query: 309 XXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRR 368
+ FT++Y PR PSEF++P +Y ++V + S+GMRF M FE EE+ ++R
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQR 347
Query: 369 YMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
+ GTIVGI + DP RWP SKWR+++V WDE + +RVS W +E
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVE 393
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 802 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 856
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 857 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 915
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 916 DDPWEEFVGCVRCIRILSPSEVQQMS 941
DDPW+EF VR I I + EV++M+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 236/346 (68%), Gaps = 17/346 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV++P+ V+YFPQGH EQV AST + A Q+P Y L S+LLC+
Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115
Query: 137 VQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPISDFGTKQSKHPSEFFCKTL 188
V NV L A+ +TDE+YAQ++L P + E + P F FCKTL
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHS-------FCKTL 168
Query: 189 TASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 248
TASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH N W FRHI+RGQP+RHL
Sbjct: 169 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHL 228
Query: 249 LTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLX 308
L +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ +PSSV+S+ SMH+GVL
Sbjct: 229 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 288
Query: 309 XXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRR 368
+ FT++Y PR PSEF++P +Y ++V + S+GMRF M FE EE+ ++R
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQR 347
Query: 369 YMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
+ GTIVGI + DP RWP SKWR+++V WDE + +RVS W +E
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVE 393
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 802 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 856
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 857 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 915
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 916 DDPWEEFVGCVRCIRILSPSEVQQMS 941
DDPW+EF VR I I + EV++M+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 236/346 (68%), Gaps = 17/346 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV++P+ V+YFPQGH EQV AST + A Q+P Y L S+LLC+
Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115
Query: 137 VQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPISDFGTKQSKHPSEFFCKTL 188
V NV L A+ +TDE+YAQ++L P + E + P F FCKTL
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHS-------FCKTL 168
Query: 189 TASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 248
TASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH N W FRHI+RGQP+RHL
Sbjct: 169 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHL 228
Query: 249 LTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLX 308
L +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ +PSSV+S+ SMH+GVL
Sbjct: 229 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 288
Query: 309 XXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRR 368
+ FT++Y PR PSEF++P +Y ++V + S+GMRF M FE EE+ ++R
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQR 347
Query: 369 YMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
+ GTIVGI + DP RWP SKWR+++V WDE + +RVS W +E
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVE 393
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 802 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 856
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 857 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 915
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 916 DDPWEEFVGCVRCIRILSPSEVQQMS 941
DDPW+EF VR I I + EV++M+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 236/346 (68%), Gaps = 17/346 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV++P+ V+YFPQGH EQV AST + A Q+P Y L S+LLC+
Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115
Query: 137 VQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPISDFGTKQSKHPSEFFCKTL 188
V NV L A+ +TDE+YAQ++L P + E + P F FCKTL
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHS-------FCKTL 168
Query: 189 TASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 248
TASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH N W FRHI+RGQP+RHL
Sbjct: 169 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHL 228
Query: 249 LTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLX 308
L +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ +PSSV+S+ SMH+GVL
Sbjct: 229 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 288
Query: 309 XXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRR 368
+ FT++Y PR PSEF++P +Y ++V + S+GMRF M FE EE+ ++R
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQR 347
Query: 369 YMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
+ GTIVGI + DP RWP SKWR+++V WDE + +RVS W +E
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVE 393
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 24/173 (13%)
Query: 802 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 856
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 857 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 915
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 916 DDPWEEFVGCVRCIRILSPSEVQQM--------SEE----GMKLLNSGALQGI 956
DDPW+EF VR I I + EV++M SEE G +L+ +G G+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVDGGRLVETGEQNGM 849
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 352 bits (904), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 194
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 195 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 254
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 255 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 314
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 315 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 374
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 375 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 428
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 429 LKRPLQSGL 437
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 851 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 908
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 536 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 593
Query: 909 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 950
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 594 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 635
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 352 bits (903), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 194
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 195 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 254
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 255 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 314
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 315 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 374
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 375 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 428
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 429 LKRPLQSGL 437
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 851 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 908
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 538 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 595
Query: 909 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 950
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 596 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 637
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 352 bits (903), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 194
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 195 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 254
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 255 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 314
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 315 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 374
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 375 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 428
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 429 LKRPLQSGL 437
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 851 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 908
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 598
Query: 909 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 950
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 352 bits (903), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 77 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 136
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 194
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 195 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 254
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 255 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 314
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 315 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 374
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 375 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 428
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 429 LKRPLQSGL 437
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 851 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 908
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 598
Query: 909 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 950
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 342 bits (877), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 235/350 (67%), Gaps = 8/350 (2%)
Query: 78 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQ-IPNYPSLQSQLLCQ 136
L +ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + Q IP + +L ++LC+
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 97
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTH 196
V +VTL A+ ETDE+YAQ++LQP + E + + +K + F K LTASDTSTH
Sbjct: 98 VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTH 157
Query: 197 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 256
GGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 158 GGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 217
Query: 257 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 316
V SKRL AGD+ +F+R E LRVGVRR +QQ+T+P+SV+S+ SM +GVL
Sbjct: 218 VTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTT 277
Query: 317 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 376
+ F +FY PR S+F+I + KY A+ + S+GMR+ M FE EES +R + GTI+G
Sbjct: 278 TTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIGS 334
Query: 377 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE--TPESLFIFPS 424
D+ +WP SKWR++Q++WDEP + N+VS W+IE +P +L P+
Sbjct: 335 GDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 383
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 801 DGQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKA 860
D S+ SA++ D++ S++ +SS QQ ST R+ KVQ
Sbjct: 462 DLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTST--RSRIKVQMQ 519
Query: 861 G-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPW 919
G +VGR++D+T ++Y+ELI+ +E MF ++G L + W +V+ D E D +LVGDDPW
Sbjct: 520 GTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL--SPKDKWAIVFTDDEGDRMLVGDDPW 577
Query: 920 EEFVGCVRCIRILSPSEVQQMSEEGM 945
EF + + I EV++M + +
Sbjct: 578 NEFCKMAKKLFIYPSDEVKKMRSKSL 603
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 342 bits (876), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 235/350 (67%), Gaps = 8/350 (2%)
Query: 78 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQ-IPNYPSLQSQLLCQ 136
L +ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + Q IP + +L ++LC+
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTH 196
V +VTL A+ ETDE+YAQ++LQP + E + + +K + F K LTASDTSTH
Sbjct: 77 VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTH 136
Query: 197 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 256
GGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 137 GGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 196
Query: 257 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 316
V SKRL AGD+ +F+R E LRVGVRR +QQ+T+P+SV+S+ SM +GVL
Sbjct: 197 VTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTT 256
Query: 317 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 376
+ F +FY PR S+F+I + KY A+ + S+GMR+ M FE EES +R + GTI+G
Sbjct: 257 TTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIGS 313
Query: 377 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE--TPESLFIFPS 424
D+ +WP SKWR++Q++WDEP + N+VS W+IE +P +L P+
Sbjct: 314 GDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 362
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 801 DGQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKA 860
D S+ SA++ D++ S++ +SS QQ ST R+ KVQ
Sbjct: 441 DLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTST--RSRIKVQMQ 498
Query: 861 G-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPW 919
G +VGR++D+T ++Y+ELI+ +E MF ++G L + W +V+ D E D +LVGDDPW
Sbjct: 499 GTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL--SPKDKWAIVFTDDEGDRMLVGDDPW 556
Query: 920 EEFVGCVRCIRILSPSEVQQMSEEGM 945
EF + + I EV++M + +
Sbjct: 557 NEFCKMAKKLFIYPSDEVKKMRSKSL 582
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 242/376 (64%), Gaps = 21/376 (5%)
Query: 78 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQV 137
+ SELWHACAGPL LP+ G++V YFPQGH EQ A + ++ +IP + L Q++C+V
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSY-SSPLEIPKF-DLNPQIVCRV 119
Query: 138 QNVTLHADKETDEIYAQMSLQPV------NSE-KEVFPISD----FGTKQSKHPSEFFCK 186
NV L A+K+TDE+Y Q++L P+ N E KEV + G+ K FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179
Query: 187 TLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKR 246
TLTASDTSTHGGFSVPRRAAE F LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239
Query: 247 HLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGV 306
HLLTTGWS+FV K L +GD+VLF+RDE +LR+G+RRA R + LP S++ +S +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298
Query: 307 LXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGK 366
L +S F +FY+PRA +EFVIP KY ++ S + +G RF M FE ++S +
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357
Query: 367 RRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLT 426
RR G + G+ D+DP RWP SKWR + V WDE D Q RVS W+I+ SL P L+
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSL---PHLS 414
Query: 427 -SSLKRPLQ--SGLLE 439
S RP + +GLL+
Sbjct: 415 IQSSPRPKRPWAGLLD 430
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 848 STPIRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVD 906
S+ R TKV K GS VGR+ID++ Y++L+ +E +F ++GLL D + GW+++Y D
Sbjct: 661 SSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE-KGWRILYTD 719
Query: 907 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGAL 953
E+D+++VGDDPW +F V I + + EV+ +++ L AL
Sbjct: 720 SENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCLEQAAL 766
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/338 (50%), Positives = 224/338 (66%), Gaps = 6/338 (1%)
Query: 78 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQ-IPNYPSLQSQLLCQ 136
L +ELW CAGPLV +P+ V+YFPQGH EQ+ AST + S+ IP + L ++LC+
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80
Query: 137 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTH 196
V +VTL A+ ETDE+YAQ++LQP + E + +K F K LTASDTSTH
Sbjct: 81 VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTH 140
Query: 197 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 256
GGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 141 GGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 200
Query: 257 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 316
V SKRL AGD+ +F+R E LRVGVRR R Q+T+P+SV+S+ SMH+GVL
Sbjct: 201 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRT 260
Query: 317 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 376
+ F +FY PR S+F++ + KY +A+ S+G RF M FE EES +R + GTIVG
Sbjct: 261 TTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIVGS 317
Query: 377 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
D+ +WP SKWR++QV+WDEP + ++VS W+IE
Sbjct: 318 GDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE 354
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 852 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYES 909
R+ TKVQ G +VGR++D+T K+Y+ELI +E MF + G LL K W +V+ D E
Sbjct: 489 RSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK---WIVVFTDDEG 545
Query: 910 DVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
D++L GDDPW EF + I I S EV++M+
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 577
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 333 bits (855), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/381 (48%), Positives = 246/381 (64%), Gaps = 13/381 (3%)
Query: 78 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQV 137
L ELW CAGPLV +PQ VYYFPQGH EQ+ AST++ + + L ++LC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 138 QNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPS-EFFCKTLTASDTSTH 196
NV+L A+K+TDE+YAQ++L PV +E + D + + P F K LTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 197 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 256
GGFSV R+ A + P LD T Q PTQELV D+H W F+HI+RGQP+RHLLTTGWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 257 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 316
V SKRL AGD+ +F+R E +LRVGVRRAN QQ+++PSSV+S+ SMH+GVL
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 317 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 376
++ F ++Y PR S+F+I L KY +A+ +++ SVGMRF M FE E+S +RRY GT++G+
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRYSGTVIGV 305
Query: 377 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIET-PESLFIFPSLTSSLKRPLQ- 434
D P W SKWR ++V WDEP + N+VS W+IE S + S+ KRP Q
Sbjct: 306 KDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPRQV 364
Query: 435 ---SGL---LENEWGTLLRKP 449
S L N W ++L +P
Sbjct: 365 SEVSALGITASNLWSSVLTQP 385
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 848 STPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVD 906
S+ R+ TKVQ G VGR++D+ K Y ELI IE +F + G L + W++V+ D
Sbjct: 517 SSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSR--NQWEIVFTD 574
Query: 907 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
E D++LVGDDPW EF V+ I I S EV++M+
Sbjct: 575 DEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 609
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 333 bits (853), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 229/338 (67%), Gaps = 5/338 (1%)
Query: 78 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQV 137
L ELW CAGPLV +PQ VYYFPQGH EQ+ AST++ + + L ++LC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 138 QNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPS-EFFCKTLTASDTSTH 196
NV+L A+K+TDE+YAQ++L PV +E + D + + P F K LTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 197 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 256
GGFSV R+ A + P LD T Q PTQELV D+H W F+HI+RGQP+RHLLTTGWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 257 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 316
V SKRL AGD+ +F+R E +LRVGVRRAN QQ+++PSSV+S+ SMH+GVL
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 317 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 376
++ F ++Y PR S+F+I L KY +A+ +++ SVGMRF M FE E+S +RRY GT++G+
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRYSGTVIGV 305
Query: 377 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
D P W SKWR ++V WDEP + N+VS W+IE
Sbjct: 306 KDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 848 STPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVD 906
S+ R+ TKVQ G VGR++D+ K Y ELI IE +F + G L + W++V+ D
Sbjct: 519 SSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSR--NQWEIVFTD 576
Query: 907 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
E D++LVGDDPW EF V+ I I S EV++M+
Sbjct: 577 DEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 319 bits (818), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 218/349 (62%), Gaps = 19/349 (5%)
Query: 81 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 140
ELWHACAGPL+SLP+ GSLV YFPQGH EQ A A +P + + C++ +V
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ--APDFSAAIYGLPPH------VFCRILDV 105
Query: 141 TLHADKETDEIYAQMSLQPVNSEKE------VFPIS----DFGTKQSKHPSEFFCKTLTA 190
LHA+ TDE+YAQ+SL P + + E + + D+ + + FCKTLTA
Sbjct: 106 KLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTA 165
Query: 191 SDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 250
SDTSTHGGFSVPRRAAE FP LDY+ P+QEL+ RDLH W FRHIYRGQP+RHLLT
Sbjct: 166 SDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLT 225
Query: 251 TGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXX 310
TGWS FV K+L +GD+VLF+R + +LR+GVRRA++ + T S +M+
Sbjct: 226 TGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEV 285
Query: 311 XXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 370
S F+I YNP+A S F+IP K+ K V +GMRF E+E++ +RR
Sbjct: 286 AHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV-DYPFCIGMRFKARVESEDASERRSP 344
Query: 371 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESL 419
G I GI+D+DP+RWPGSKWR + V WD+ Q RVS W+IE S+
Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSI 393
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 212/347 (61%), Gaps = 12/347 (3%)
Query: 70 IFSGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIP--NYP 127
I G + + +LW CAGPL +P++G VYYFPQGH E V ASTR P ++P
Sbjct: 16 IIDGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFP 75
Query: 128 SLQSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKT 187
S +L C+V + L + +DE YA+++L P ++ + V P + Q + F K
Sbjct: 76 S---KLQCRVIAIQLKVENNSDETYAEITLMP-DTTQVVIPTQN--QNQFRPLVNSFTKV 129
Query: 188 LTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRH 247
LTASDTS HGGFSVP++ A + P LD + PTQE++ DLH N W FRHIYRG +RH
Sbjct: 130 LTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRH 189
Query: 248 LLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVL 307
LLT GW+ F SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S +SM G++
Sbjct: 190 LLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGII 249
Query: 308 XXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKR 367
N+ F + Y PR+ S+F++ K+ V ++ +VG RF M FE ++ +R
Sbjct: 250 ASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSER 306
Query: 368 RYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
R GTI+G++D P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 307 RSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 352
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 852 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 910
RT TKVQ G ++GR++D++ Y++LI +E +F L G L + W++ + + E D
Sbjct: 510 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEIAFTNNEED 567
Query: 911 VLLVGDDPWEEFVGCVRCIRILSPSEVQQM 940
+LVG+DPW EF V+ I I S EV+ +
Sbjct: 568 KMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 234/400 (58%), Gaps = 19/400 (4%)
Query: 70 IFSGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSL 129
I G + + +LW CAGPL +P++G VYYFPQG+ E V ASTR P L
Sbjct: 16 IIDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDL 74
Query: 130 QSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLT 189
S+L C+V + L + +DEIYA+++L P ++ + V P + + F K LT
Sbjct: 75 PSKLQCRVIAIHLKVENNSDEIYAEITLMP-DTTQVVIPTQ--SENRFRPLVNSFTKVLT 131
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTS +GGFSVP++ A + P LD + P QE++ DLHDN W FRH YRG P+RH L
Sbjct: 132 ASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSL 191
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXX 309
TTGW+ F+ SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+
Sbjct: 192 TTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIAS 251
Query: 310 XXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRY 369
N+ F + Y PR+ S+F++ K+ AV ++ +VG RF M FE ++ +RRY
Sbjct: 252 AKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRY 308
Query: 370 MGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSL 429
GTI+G++D P W S+WR+++V+WDE + N+VS W+IE + P+L
Sbjct: 309 FGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE-----HLVPALNVPR 362
Query: 430 KRPLQSGLLE--NEWGT----LLRKPFIKAPESGAMELSS 463
L++ L NE+G+ LL + E G + ++S
Sbjct: 363 SSLLKNKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVAS 402
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 852 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 910
RT TKVQ G ++GR++D++ Y++LI +E +F + G L + WK+ + D +
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTR--NQWKIAFTDSDGY 568
Query: 911 VLLVGDDPWEEFVGCVRCIRILSPSEVQ 938
+LVGDDPW EF V+ I I S EV+
Sbjct: 569 EMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 206/345 (59%), Gaps = 8/345 (2%)
Query: 70 IFSGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSL 129
I G + + +LW CAGPL +P++G VYYFPQGH E V STR P L
Sbjct: 16 IIDGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDL 74
Query: 130 QSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLT 189
S+L C+V + L + +DE YA+++L P ++ + V P + Q + F K LT
Sbjct: 75 PSKLQCRVIAIHLKVENNSDETYAEITLMP-DTTQVVIPTQN--ENQFRPLVNSFTKVLT 131
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTS HGGF VP++ A + P LD + P QEL+ DLH N W F H YRG P+RHLL
Sbjct: 132 ASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLL 191
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXX 309
TTGW+ F SK+L AGD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+
Sbjct: 192 TTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVAS 251
Query: 310 XXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRY 369
N+ FT+ Y PR+ S+F++ K+ AV ++ +VG RF M E ++ +RR
Sbjct: 252 AKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERRC 308
Query: 370 MGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
GTI+G++D P W S+WR+++V+WDE +VS WDIE
Sbjct: 309 FGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIE 352
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 852 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 910
RT TKVQ G ++GR++D++ Y++LI +E +F + G L + W++ + D + D
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTR--NQWEIAFTDSDED 568
Query: 911 VLLVGDDPWEEFVGCVRCIRI 931
+LVGDDPW EF V+ I I
Sbjct: 569 KMLVGDDPWPEFCNMVKKIFI 589
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 280 bits (715), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 216/372 (58%), Gaps = 20/372 (5%)
Query: 70 IFSGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSL 129
I G + + +LW CAGPL +P++G VYYFPQG+ E V ASTR P L
Sbjct: 16 IIDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDL 74
Query: 130 QSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLT 189
S+L C+V + L + +DE YA+++L P ++ + V P Q + F K LT
Sbjct: 75 PSKLQCRVIAIHLKVENNSDETYAEITLMP-DTTQVVIPTQ--SENQFRPLVNSFTKVLT 131
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTS +GGF VP++ A + P L P QEL+ +DLH N W FRH YRG P+RH L
Sbjct: 132 ASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSL 187
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXX 309
TTGW+ F SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+
Sbjct: 188 TTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIAS 247
Query: 310 XXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRY 369
N+ F + Y P S+F++ K+ A+ ++ VG RF M FE ++ +RRY
Sbjct: 248 AKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERRY 306
Query: 370 MGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSL 429
GTI+G+ND P W S+WR+++V+WDE + N+VS W+IE L S+L
Sbjct: 307 FGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE---------HLMSAL 356
Query: 430 KRPLQSGLLENE 441
P +S LL+N+
Sbjct: 357 NVP-RSSLLKNK 367
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 837 SLLQNNSWQQGSTPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDT 895
S ++ S Q GST RT TKVQ G ++GR++D++ Y++LI +E +F L G L
Sbjct: 482 SPIEIQSKQFGST--RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTR 539
Query: 896 KGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQ 938
+ WK+ + D + +LVGDDPW EF V+ I I S EV+
Sbjct: 540 --NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 277 bits (708), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 232/403 (57%), Gaps = 24/403 (5%)
Query: 81 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 140
+LW CAGPL +P++G VYYFPQG+ E V ASTR P L S+L C+V +
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85
Query: 141 TLHADKETDEIYAQMSLQPVNSEKE----VFPISDFGTKQSKHPSEFFCKTLTASDTSTH 196
L + +DE YA+++L P + E V P + Q + F K LTASD S +
Sbjct: 86 HLKVENNSDETYAKITLMPDTTVSENLQVVIPTQN--ENQFRPLVNSFTKVLTASDISAN 143
Query: 197 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 256
G FSVP++ A + P LD + P QEL+ DLH N W+FRH YRG P+RHLLTTGW+ F
Sbjct: 144 GVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEF 203
Query: 257 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 316
SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+ N
Sbjct: 204 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDN 263
Query: 317 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 376
+ F + Y PR+ S+F++ K+ AV ++ +VG RF M FE ++ +RRY GTI+G+
Sbjct: 264 QCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTIIGV 320
Query: 377 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSLKRPLQSG 436
++ P W S WR+++V+WDE + N+VS W+IE + P+L L++
Sbjct: 321 SNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIE-----HLMPALNVPRSSFLKNK 374
Query: 437 LLE--NEWGT----LLRKPFIKAPESGAMELSS--SIPNLYQE 471
L NE+G+ LL + E G + ++S +I LY+E
Sbjct: 375 RLREVNEFGSSSSHLLPPILTQGQEIGQLSVASPMNISLLYRE 417
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 852 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 910
RT TKVQ G ++GR++D++ Y++LI +E +F L G L + WK+++ + D
Sbjct: 516 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTR--NQWKIIFTGSDED 573
Query: 911 VLLVGDDPWEEFVGCVRCIRI 931
+LVGDDPW EF V+ I I
Sbjct: 574 EMLVGDDPWPEFCNMVKRIYI 594
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 270 bits (691), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 211/345 (61%), Gaps = 10/345 (2%)
Query: 70 IFSGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSL 129
I G + + +LW CAGPL +P++G +YYFPQG+ E V ASTR P L
Sbjct: 16 IIDGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDL 74
Query: 130 QSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLT 189
S+L C+V + L + +DE YA+++L P ++ + V P + Q + F K LT
Sbjct: 75 PSKLQCRVIAIQLKVENNSDETYAEITLMP-DTTQVVIPTQN--ENQFRPLVNSFTKVLT 131
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTS GGF VP++ A + P LD + PTQEL+ DLH N W F H YRG P+RHLL
Sbjct: 132 ASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLL 189
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXX 309
TTGW+ F SK+L AGD ++F+R E +LRVG+RRA QQ +PSS++S +SM GV+
Sbjct: 190 TTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIAS 249
Query: 310 XXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRY 369
N+ F + Y PR+ S+F++ K+ AV ++ +VG RF M FE ++ +RRY
Sbjct: 250 AKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRY 306
Query: 370 MGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
GTI+G++D P W S+WRN++V+WDE + N+VS W+IE
Sbjct: 307 FGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIE 350
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 852 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 910
RT TKVQ G ++ R++D++ Y++LI +E +F L G L + W++ + D + D
Sbjct: 509 RTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTR--NQWEIAFTDSDDD 566
Query: 911 VLLVGDDPWEEFVGCVRCIRIL 932
+LVGDDPW EF V+ I I
Sbjct: 567 KMLVGDDPWPEFCNMVKKILIF 588
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 266 bits (679), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 203/337 (60%), Gaps = 12/337 (3%)
Query: 81 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 140
+LW+ CAGPL LP+ G VYYFPQGH E + STR P + L S+L C+V +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLRCRVVAI 83
Query: 141 TLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP-SEFFCKTLTASDTSTHGGF 199
DK TDE+YAQ+SL P +E ++ T ++ P FF K LTASD S GG
Sbjct: 84 DRKVDKNTDEVYAQISLMPDTTEV----MTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 200 SVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT--GWSLFV 257
+P++ A + FP LD + TQ LV +DL+ W+F+H++RG P+RH+ T+ GWS+F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 258 GSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNR 317
+KRL GD + +R E +LR G+RRA QQ +PSSV+SA+ M GV+ +
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 259
Query: 318 SPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGIN 377
F + Y P + S+FVI K+ A+ + + VG RF M FE ++ ++RY GTI+G+N
Sbjct: 260 CMFNVVYKPSS--SQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGVN 316
Query: 378 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
D+ P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 317 DMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 352
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 203/385 (52%), Gaps = 54/385 (14%)
Query: 76 RTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLC 135
++L+ +LWHACAG +V +P + S V+YF QGH+E A A P P L +LC
Sbjct: 5 KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHA----PRVPPL---ILC 57
Query: 136 QVQNVTLHADKETDEIYAQMSLQPV---------NSEKEVFPISDFGTKQSKHPSEFFCK 186
+V +V AD ETDE++A+++L P+ ++ + P S G K F K
Sbjct: 58 RVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAK 117
Query: 187 TLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKR 246
TLT SD + GGFSVPR AE +FP+LDY+ +PP Q ++ +D+H TW FRHIYRG P+R
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177
Query: 247 HLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANR------------------- 287
HLLTTGWS FV K+L AGDS++F+R E L VG+RRA R
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGF 237
Query: 288 ----QQTTLPSSVL--------SADSMHIGVLXXXXXXXXNRS-----PFTIFYNPRACP 330
+ TT S ++ ++ G + F + Y PRA
Sbjct: 238 LRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRAST 297
Query: 331 SEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGK-RRYMGTIVGINDVDPLRWPGSKW 389
EF + A R A+ S GMRF M FETE+S + +MGT+ + DP+RWP S W
Sbjct: 298 PEFCVKAADVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 356
Query: 390 RNIQVEWDEPGCGDKQNRVSVWDIE 414
R +QV WDEP RVS W +E
Sbjct: 357 RLLQVAWDEPDLLQNVKRVSPWLVE 381
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 209/397 (52%), Gaps = 54/397 (13%)
Query: 73 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 132
G + L+ +LWHACAG +V +P + S V+YFPQGH+E N P +
Sbjct: 11 GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCV------DFGNLP-IPPM 63
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEV-------FPISDFGTKQSKHPSEFFC 185
+LC+V + AD E+DE++A++ L P+ ++ V + F + K PS F
Sbjct: 64 VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPS--FA 121
Query: 186 KTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPK 245
KTLT SD + GGFSVPR AE +FP+LDY +PP Q ++ +D+H + W FRHIYRG P+
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 246 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANR----------------QQ 289
RHLLTTGWS FV K+L AGDS++F+R E L VG+RRA R
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGG 241
Query: 290 TTLPSSVLSADSMHI------------------GVLXXXXXXXXNRSPFTIFYNPRACPS 331
+ SS+L D + V+ R PF + Y PRA S
Sbjct: 242 SCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGR-PFEVVYYPRASTS 300
Query: 332 EFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGK-RRYMGTIVGINDVDPLRWPGSKWR 390
EF + R A+ S GMRF M FETE+S + +MGT+ +N DP+RWP S WR
Sbjct: 301 EFCVKALDARAAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWR 359
Query: 391 NIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTS 427
+QV WDEP RV+ W +E ++ P LTS
Sbjct: 360 LLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP-LTS 395
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 166/243 (68%), Gaps = 6/243 (2%)
Query: 184 FCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQ 243
F K LTASDTSTHGGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQ
Sbjct: 37 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQ 96
Query: 244 PKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMH 303
P+RHLLTTGWS FV SKRL AGD+ +F+R E LRVGVRR +QQ+T+P+SV+S+ SM
Sbjct: 97 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMR 156
Query: 304 IGVLXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEE 363
+GVL + F +FY PR S+F+I + KY A+ + S+GMR+ M FE EE
Sbjct: 157 LGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEE 213
Query: 364 SGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE--TPESLFI 421
S +R + GTI+G D+ +WP SKWR++Q++WDEP + N+VS W+IE +P +L
Sbjct: 214 SPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTP 272
Query: 422 FPS 424
P+
Sbjct: 273 TPT 275
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 801 DGQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKA 860
D S+ SA++ D++ S++ +SS QQ ST R+ KVQ
Sbjct: 354 DLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTST--RSRIKVQMQ 411
Query: 861 G-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPW 919
G +VGR++D+T ++Y+ELI+ +E MF ++G L + W +V+ D E D +LVGDDPW
Sbjct: 412 GTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL--SPKDKWAIVFTDDEGDRMLVGDDPW 469
Query: 920 EEFVGCVRCIRILSPSEVQQMSEEGM 945
EF + + I EV++M + +
Sbjct: 470 NEFCKMAKKLFIYPSDEVKKMRSKSL 495
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 188/337 (55%), Gaps = 38/337 (11%)
Query: 81 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 140
+LW+ CAGPL LP+ G VYYFPQGH E + STR P + L S+L C+V +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLRCRVVAI 83
Query: 141 TLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP-SEFFCKTLTASDTSTHGGF 199
DK TDE+YAQ+SL P +E ++ T ++ P FF K LTASD S GG
Sbjct: 84 DRKVDKNTDEVYAQISLMPDTTEV----MTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 200 SVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT--GWSLFV 257
+P++ A + FP LD + TQ LV +DL+ W+F+H++RG P+RH+ T+ GWS+F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 258 GSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNR 317
+KRL GD + +R E +LR G+RRA QQ +PSSV+SA+ M GV+ +
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 259
Query: 318 SPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGIN 377
F + Y PR M FE ++ ++RY GTI+G+N
Sbjct: 260 CMFNVVYKPR-----------------------------MQFEGKDFSEKRYDGTIIGVN 290
Query: 378 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
D+ P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 291 DMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 188/337 (55%), Gaps = 38/337 (11%)
Query: 81 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 140
+LW+ CAGPL LP+ G VYYFPQGH E + STR P + L S+L C+V +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLRCRVVAI 83
Query: 141 TLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP-SEFFCKTLTASDTSTHGGF 199
DK TDE+YAQ+SL P +E ++ T ++ P FF K LTASD S GG
Sbjct: 84 DRKVDKNTDEVYAQISLMPDTTEV----MTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 200 SVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT--GWSLFV 257
+P++ A + FP LD + TQ LV +DL+ W+F+H++RG P+RH+ T+ GWS+F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 258 GSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNR 317
+KRL GD + +R E +LR G+RRA QQ +PSSV+SA+ M GV+ +
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 259
Query: 318 SPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGIN 377
F + Y PR M FE ++ ++RY GTI+G+N
Sbjct: 260 CMFNVVYKPR-----------------------------MQFEGKDFSEKRYDGTIIGVN 290
Query: 378 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 414
D+ P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 291 DMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 855 TKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLL 913
TKV G ++ R++D+T Y +LI+ +E +F L L + W++V+ + E +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTR--NQWEIVFTNNEGAEML 493
Query: 914 VGDDPWEEFVGCVRCIRILSPSEVQQM 940
VGDDPW EF + I I S E+++M
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 189/378 (50%), Gaps = 51/378 (13%)
Query: 75 RRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAA--STRRTATSQIPNYPSLQSQ 132
R ++ +W ACAG V +P + S VYYFPQGH E ST ++TS +P
Sbjct: 13 HREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPVP-------- 64
Query: 133 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDF-------GTKQSKHPSEFFC 185
C + ++ L AD TDE++A + LQP+ ++ F +++ G + F
Sbjct: 65 --CIITSIQLLADPVTDEVFAHLILQPMTQQQ--FTPTNYSRFGRFDGDVDDNNKVTTFA 120
Query: 186 KTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPK 245
K LT SD + GGFSVPR A+ +FP L++ I PP Q+L V D+H W FRHIYRG P+
Sbjct: 121 KILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPR 180
Query: 246 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLP------------ 293
RHLLTTGWS FV SK+L AGDSV+F+R ++ +GVRR +
Sbjct: 181 RHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGY 240
Query: 294 ---SSVLSAD----------SMHIGVLXXXXXXXXNRS----PFTIFYNPRACPSEFVIP 336
SSV D S + + NR+ PF + + P A SEFV+
Sbjct: 241 YSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV- 299
Query: 337 LAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEW 396
A+ ++ + + G R M ETE+S + + IV + W GS W+ +Q+ W
Sbjct: 300 RAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITW 359
Query: 397 DEPGCGDKQNRVSVWDIE 414
DEP RV+ W +E
Sbjct: 360 DEPEILQNVKRVNPWQVE 377
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 122/214 (57%), Gaps = 7/214 (3%)
Query: 70 IFSGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSL 129
I G + + +LW CAGPL +P++G VYYFPQGH E V ASTR PN L
Sbjct: 16 IIDGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DL 74
Query: 130 QSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLT 189
S+L C+V + L + +DE Y +++L P ++ + V P + Q + F K LT
Sbjct: 75 PSKLQCRVIAIHLKVENNSDETYVEITLMP-DTTQVVIPTEN--ENQFRPIVNSFTKVLT 131
Query: 190 ASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLL 249
ASDTS G FSVP + A + P LD + P QEL+ DLH N W F+H YR P+
Sbjct: 132 ASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD-- 188
Query: 250 TTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVR 283
TTGW+ F SK+L GD ++F R E +LRVG+R
Sbjct: 189 TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 155 MSLQPVNSEKEVFPISDF-GTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQL 213
+SL E+E P+++ G ++ F K +T SD +P++ AE+ FP L
Sbjct: 5 LSLTRDEDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-L 63
Query: 214 DYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 272
D + L DL +W FR+ Y + +++T GWS FV K+L AGD V F R
Sbjct: 64 DSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 122
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 160 VNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQP 219
+N E + PI + + + F K +T SD +P++ AE+ FP + T
Sbjct: 1 MNQEDKEKPIEEASSSMER--EHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTND 58
Query: 220 PTQELVV--RDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD 273
+ L++ D N+W FR+ Y + +++T GWS FV K+L AGD V F RD
Sbjct: 59 SNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRD 114
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYT----IQPPTQELVVRDLHDNT---WT 235
F KT+T SD +P++ AEK FP T + P + V+ +L D T W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 236 FRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 272
FR+ Y + ++LT GWS FV K LRAGD V F R
Sbjct: 254 FRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRG 242
F K +T SD +P+ AEK FP + L D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWN 246
Query: 243 QPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVG 281
+ ++LT GWS FV K LRAGD V F R + QL +G
Sbjct: 247 SSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 184 FCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNT---WTFRHIY 240
F K LT SD +P++ AE FP D Q V D D W FR+ Y
Sbjct: 36 FDKVLTPSDVGKLNRLVIPKQHAENFFPLED------NQNGTVLDFQDKNGKMWRFRYSY 89
Query: 241 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEI 275
+ +++T GWS FV K+L AGD+V F R I
Sbjct: 90 WNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYI 124
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 854 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF----GLDGLLNDTKGSGWKLVYVDYE 908
Y KV G+ R ID+ +KNY EL++A+E MF G KGSG+ Y D +
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKD 135
Query: 909 SDVLLVGDDPWEEFVGCVRCIRILSPSEV 937
D +LVGD PW+ F + +RI+ SE
Sbjct: 136 GDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Query: 854 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF--------------GLDGL----LND 894
Y KV G+ R ID+ T+K+Y EL A+E MF G DGL L D
Sbjct: 187 YVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTD 246
Query: 895 T-KGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEV 937
+GS + + Y D +SD +LVGD PWE F+ + +RI+ SE
Sbjct: 247 LLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEA 290
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIY 240
F K +T SD +P++ AEK FP L T+ +++ D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LPSPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 241 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 272
+ ++LT GWS FV K LRAGD V F R
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIY 240
F K +T SD +P++ AEK FP L T+ +++ D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LPSPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 241 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 272
+ ++LT GWS FV K LRAGD V F R
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 819 LRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRT-----YTKVQKAG-SVGRSIDVTTF 872
R N TSSS + + S Q N G + T + K+ G +GR +D+ +
Sbjct: 113 FRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAY 172
Query: 873 KNYEELIRAIECMF-GL--------DGL--------LNDTKGSGWKLVYVDYESDVLLVG 915
+YE+L ++ +F GL DG L D KG + L Y D E D +LVG
Sbjct: 173 NSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGE-FTLTYEDNEGDKMLVG 231
Query: 916 DDPWEEFVGCVRCIRILSPSEV 937
D PW+ FV V+ +R++ SE+
Sbjct: 232 DVPWQMFVSSVKRLRVIKSSEI 253
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 854 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF----GLDGLLNDTKGSGWKLVYVDYE 908
Y KV G+ R ID+T +K Y EL++++E MF G KGS + Y D +
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKD 149
Query: 909 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGM 945
D +LVGD PWE FV + +RI+ SEV+ + G+
Sbjct: 150 GDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGGL 186
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKL------VYVD 906
Y K+ G +GR ++++ + NY++L A++ +F +K W L VY D
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF--------SKKDSWDLNRQYTLVYED 133
Query: 907 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
E D +LVGD PWE FV V+ + +L S +S
Sbjct: 134 TEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 182 EFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYR 241
F K +T SD +P++ AE+ FP LD + L +D + W FR+ Y
Sbjct: 54 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYW 112
Query: 242 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 272
+ +++T GWS FV K+L AGD V F R
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQ--LDYTIQPPTQELVVRDLHDNTWTFRHIY 240
F KT+T SD +P+ AEK FP + + L D++ W FR+ Y
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 241 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 272
+ ++LT GWS FV KRL AGD + F R
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKR 273
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 56.6 bits (135), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 853 TYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF----GLDGLLNDTKGSGWKLVYVDY 907
+Y KV G+ R ID+ T+KNY EL++A+E MF G KGSG+ Y D
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Query: 908 ESDVLLVGDDPWEEFVGCVRCIRILSPSE 936
+ D +LVGD PW+ F + +RI+ S+
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMKGSD 166
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 840 QNNSWQQGSTPIRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGL--------DG 890
+N S +G Y KV G+ R ID++ +K Y EL++A+E MF DG
Sbjct: 83 KNESEHEGQG---IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDG 139
Query: 891 LLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQM 940
KGS + Y D + D +L+GD PWE F+ + +RI+ SE + +
Sbjct: 140 Y----KGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 184 FCKTLTASDTSTHGGFSVPRRAAEKLFPQL----------DYTIQPPTQELVVRDLHDNT 233
F K+LT SD +P++ AEK FP D L D
Sbjct: 29 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKC 88
Query: 234 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVGVRR 284
W FR+ Y + ++LT GWS +V K L AGD V F R ++ +L +G RR
Sbjct: 89 WKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQL----------DYTIQPPTQELVVRDLHDN 232
F K+LT SD +P++ AEK FP D L D
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 233 TWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVGVRR 284
W FR+ Y + ++LT GWS +V K L AGD V F R ++ +L +G RR
Sbjct: 88 CWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 FCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIYR 241
F K LT SD +P++ AE+ FP + L++ D W FR+ Y
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 242 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLR--VGVRR 284
+ ++LT GWS +V K L AGD VLF R R +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIY 240
F K LT SD +P++ AE+ FP + L++ D W FR+ Y
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 241 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLR--VGVRR 284
+ ++LT GWS +V K L AGD VLF R R +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 842 NSWQQGSTPIRT--YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF---GLDGLLNDT 895
N + ST +R + KV G +GR ID+ K YE L +E MF L +T
Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLET 183
Query: 896 KG-------------SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSE 936
G SG L Y D E D +LVGD PW F+G VR +RI+ SE
Sbjct: 184 DGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 842 NSWQQGSTPIRT--YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF---GLDGLLNDT 895
N + ST +R + KV G +GR ID+ K YE L +E MF L +T
Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLET 183
Query: 896 KG-------------SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEV 937
G SG L Y D E D +LVGD PW F+G VR +RI+ SE
Sbjct: 184 DGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 842 NSWQQGSTPIRT--YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF---GLDGLLNDT 895
N + ST +R + KV G +GR ID+ K YE L +E MF L +T
Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLET 183
Query: 896 KG-------------SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEV 937
G SG L Y D E D +LVGD PW F+G VR +RI+ SE
Sbjct: 184 DGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-GLDG-----------LLNDTKGSGW 900
+ KV G +GR +D+ +YE L + +E MF G+ G LL+ + S +
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGS--SDF 183
Query: 901 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
L Y D E D +LVGD PW F+ V+ +RI+ SE ++
Sbjct: 184 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKG----SGWKLVYVDYE 908
Y KV G +GR ID+ + Y +LIR ++ MF L + + L Y D E
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKE 145
Query: 909 SDVLLVGDDPWEEFVGCVRCIRI 931
D ++VGD PWE F+ VR ++I
Sbjct: 146 GDWMMVGDVPWEMFLSTVRRLKI 168
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-----GLDGLLND-TK-------GSG 899
+ KV G ++GR +D+ +YE L + +E MF G GL + TK S
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 900 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
+ L Y D E D +LVGD PW F+ V+ +R++ SE ++
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-----GLDGLLND-TK-------GSG 899
+ KV G ++GR +D+ +YE L + +E MF G GL + TK S
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 900 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
+ L Y D E D +LVGD PW F+ V+ +R++ SE ++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-----GLDGLLND-TK-------GSG 899
+ KV G ++GR +D+ +YE L + +E MF G GL + TK S
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 900 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 941
+ L Y D E D +LVGD PW F+ V+ +R++ SE ++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQE---------LVVRDLHDNT 233
F K+LT SD +P++ AEK FP + + L D +
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 234 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLF--IRDEISQLRVGVRR 284
W FR+ Y + ++LT GWS FV K+L GD V F R + +L +G RR
Sbjct: 105 WRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 183 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQE---------LVVRDLHDNT 233
F K+LT SD +P++ AEK FP + + L D +
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 234 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLF--IRDEISQLRVGVRRANRQQTT 291
W FR+ Y + ++LT GWS FV K+L GD V F R + +L +G RR + ++
Sbjct: 105 WRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSSS 164
Query: 292 LPSSVLSA 299
++ SA
Sbjct: 165 SVAATNSA 172
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 854 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF-----------GLDGLLNDTK----- 896
Y KV G+ R ID+ +K Y++L A+ MF G+ +N++K
Sbjct: 120 YVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLL 179
Query: 897 -GSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMK 946
GS + Y D + D +LVGD PWE FV + IRI+ SE ++ ++
Sbjct: 180 NGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALE 230
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 853 TYTKVQKAGSVG-RSIDVTTFKNYEELIRAIECMFGLDGLLNDT-KGSGWKLVYVDYESD 910
+Y KV G+ R ID+ +K Y++L A++ +FG +DT K S +Y D + D
Sbjct: 75 SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGD 134
Query: 911 VLLVGDDPWEEFVGCVRCIRILSPS 935
+L GD PWE F+G + +RI+ S
Sbjct: 135 WMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVL 912
+ KV G +GR +D+ F YE L+ + MF + + L Y D + D +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 913 LVGDDPWEEFVGCVRCIRILSP 934
+VGD PW+ F+ VR ++I P
Sbjct: 134 MVGDIPWDMFLETVRRLKITRP 155
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 854 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKG----SGWKLVYVDYE 908
Y KV G +GR ID+ + Y +LI ++ MF L + + L Y D E
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKE 143
Query: 909 SDVLLVGDDPWEEFVGCVRCIRI 931
D ++VGD PWE F+ VR ++I
Sbjct: 144 GDWMMVGDVPWEMFLSSVRRLKI 166