Miyakogusa Predicted Gene
- Lj0g3v0342589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0342589.1 Non Chatacterized Hit- tr|I1MC56|I1MC56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48993
PE,80.55,0,Auxin_resp,Auxin response factor; AUX_IAA,AUX/IAA protein;
B3,B3 DNA binding domain; FAMILY NOT NAME,CUFF.23484.1
(927 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 950 0.0
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 509 e-144
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 509 e-144
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 508 e-144
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 503 e-142
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 498 e-141
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 498 e-141
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 489 e-138
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 488 e-138
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 377 e-104
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 377 e-104
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 377 e-104
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 377 e-104
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 353 3e-97
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 353 3e-97
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 353 3e-97
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 353 4e-97
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 343 4e-94
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 342 5e-94
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 342 6e-94
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 335 6e-92
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 334 2e-91
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 334 2e-91
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 320 4e-87
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 287 2e-77
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 287 3e-77
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 281 2e-75
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 278 1e-74
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 278 2e-74
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 270 5e-72
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 266 4e-71
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 264 2e-70
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 262 6e-70
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 256 7e-68
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 246 6e-65
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 245 1e-64
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 212 1e-54
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 163 6e-40
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 62 2e-09
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 62 2e-09
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 62 2e-09
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 62 3e-09
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 60 1e-08
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 59 2e-08
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 59 2e-08
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 58 3e-08
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 58 3e-08
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 58 3e-08
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 57 5e-08
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 57 6e-08
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 57 6e-08
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 57 7e-08
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 56 1e-07
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 56 1e-07
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 56 1e-07
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 55 2e-07
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 2e-07
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 55 2e-07
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 2e-07
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 3e-07
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 55 3e-07
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 54 5e-07
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 54 5e-07
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 54 6e-07
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 54 6e-07
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 54 6e-07
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 54 7e-07
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 52 2e-06
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 52 2e-06
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 51 5e-06
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 50 6e-06
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/955 (56%), Positives = 629/955 (65%), Gaps = 92/955 (9%)
Query: 1 MASVEEKIKTXXXXXXXXXXXXXXQTQTQNLVAEMKLLKD-CGVRR-TLNSELWHACAGP 58
++ VE+K+KT T L+ EMKLLKD G R+ +NSELWHACAGP
Sbjct: 5 LSCVEDKMKTSCLVNGGGTITTTTSQST--LLEEMKLLKDQSGTRKPVINSELWHACAGP 62
Query: 59 LVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNVTLHADKETD 118
LV LPQVGSLVYYF QGHSEQVA STRR+AT+Q+PNYP+L SQL+CQV NVTLHADK++D
Sbjct: 63 LVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSD 122
Query: 119 EIYAQMSLQPVNSEKEVFPISDFGT-KQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEK 177
EIYAQMSLQPV+SE++VFP+ DFG + SKHP+EFFCKTLTASDTSTHGGFSVPRRAAEK
Sbjct: 123 EIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEK 182
Query: 178 LFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSV 237
LFP LDY+ QPPTQELVVRDLH+NTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSV
Sbjct: 183 LFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSV 242
Query: 238 LFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNRSPFTIFYNPRA 297
LFIRDE SQL VGVRRANRQQT LPSSVLSADSMHIGVL NR+PF IFYNPRA
Sbjct: 243 LFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRA 302
Query: 298 CPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSK 357
CP+EFVIPLAKYRKA+ SQLSVGMRFGMMFETE+SGKRRYMGTIVGI+D+DPLRWPGSK
Sbjct: 303 CPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSK 362
Query: 358 WRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSLKRPLQSGLL--ENEWGTLL 415
WRN+QVEWDEPGC DK RVS WDIETPESLFIFPSLTS LKR L E EWG+L+
Sbjct: 363 WRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTSGLKRQLHPSYFAGETEWGSLI 422
Query: 416 RKPFIKAPES--GAMELSSSIPNLYQEQLMKMLFKPQAVNNNGAFPSLMQQESAATRGPL 473
++P I+ P+S G M +S P++ EQLMKM+ +P N +F S MQQ G L
Sbjct: 423 KRPLIRVPDSANGIMPY-ASFPSMASEQLMKMMMRPHNNQNVPSFMSEMQQNIVMGNGGL 481
Query: 474 QVDNQNVHLASTGSMTLKNPCXXXXXXXXTTLLKSDQPEKLHPQPRIDNHLTSGTVTDNK 533
G M ++ P L+ + + E + PQ N LT N
Sbjct: 482 -----------LGDMKMQQP-----------LMMNQKSEMVQPQ----NKLTVNPSASNT 515
Query: 534 SRLESEVLDHVLDFPS------MEGCKIEKMVTNPINPQNLASHLTIXXXXXXXXXXXSS 587
S E L + P+ + GC ++ AS +T
Sbjct: 516 SGQEQN-LSQSMSAPAKPENSTLSGCSSGRVQHGLEQSMEQASQVTTSTVCNEEKVNQL- 573
Query: 588 TWPMQHTQLESSLSYPQVIDMS----QSDSAIVNGTLPQLDIEEWMA-YSSCQPFAGQNR 642
+Q S + Q +D++ Q S +NG L+ +E + SS Q AG +
Sbjct: 574 ---LQKPGASSPVQADQCLDITHQIYQPQSDPING-FSFLETDELTSQVSSFQSLAGSYK 629
Query: 643 SNGPFSDFQEHASLQAQVVNNPSLTSTNQEVLDHYVKNLKFFSQADQLTSIYGFNGISSS 702
S A + N+P +V D + LKF DQ + + + +S
Sbjct: 630 QPFILSSQDSSAVVLPDSTNSPLF----HDVWDTQLNGLKF----DQFSPLMQQDLYASQ 681
Query: 703 NNLRDLSSESNNQSEICXXXXXXXXXXXXXXXXXXXXXXILDEFCTMKERDFQ-HPQECM 761
N S+ SN +LD+FC +K+ DFQ HP C+
Sbjct: 682 NICMSNSTTSN-------------------ILDPPLSNTVLDDFCAIKDTDFQNHPSGCL 722
Query: 762 VG--NLSCSQDGQSQITSASLAESHAFCLR---DNSG--GTSSSHVDFDDSSLLQN---N 811
VG N S +QD QSQITSAS A+S AF + DNSG GTSSS+VDFDD SL QN +
Sbjct: 723 VGNNNTSFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGS 782
Query: 812 SWQQGSTP-IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWK 870
SWQ+ +TP +RTYTKVQK GSVGRSIDVT+FK+YEEL AIECMFGL+GLL + SGWK
Sbjct: 783 SWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWK 842
Query: 871 LVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGI 925
LVYVDYESDVLLVGDDPWEEFVGCVRCIRILSP+EVQQMSEEGMKLLNS + +
Sbjct: 843 LVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAGINDL 897
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/415 (60%), Positives = 304/415 (73%), Gaps = 15/415 (3%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G +R LNSELWHACAGPLVSLP VGS V YFPQGHSEQVAAST + + IPNYPSL Q
Sbjct: 15 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 74
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPI--SDFGTKQSKHPSEFFCKTLTA 159
L+CQ+ NVT+HAD ETDE+YAQM+LQP+N++++ P ++ G S+ P+ +FCKTLTA
Sbjct: 75 LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVP-SRQPTNYFCKTLTA 133
Query: 160 SDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 219
SDTSTHGGFSVPRRAAEK+FP LDY+ QPP QEL+ RDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 193
Query: 220 TGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXX 279
TGWS+FV +KRL AGDSVLFI ++ +QL +G+RRANR QT +PSSVLS+DSMH+G+L
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253
Query: 280 XXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 339
S FTIFYNPRA PSEFVIPLAKY KAVY +++SVGMRF M+FETEES RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313
Query: 340 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPS-LTSSL 398
GTI GI D+DP RW S WR+++V WDE G++Q RVS+W+IE + ++PS L
Sbjct: 314 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 373
Query: 399 KRPLQSGLLENEWGTLLRKPFIKAPESGAMELSSSIPNLYQEQLMKMLFKPQAVN 453
KRP GL P + M +S S P ++ L + F+ VN
Sbjct: 374 KRPWPPGL-----------PSFHGLKEDDMGMSMSSPLMWDRGLQSLNFQGMGVN 417
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 802 FDDSSLLQNNSWQQGSTP-IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGL 860
D+S LQ++ P T+ KV K+GS GRS+D++ F +Y EL + MFGL+G
Sbjct: 774 IDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQ 833
Query: 861 LNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSG 920
L D SGW+LV+VD E+DVLL+GDDPW EFV V CI+ILSP EVQQM + G++LLNS
Sbjct: 834 LEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSA 893
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/415 (60%), Positives = 304/415 (73%), Gaps = 15/415 (3%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G +R LNSELWHACAGPLVSLP VGS V YFPQGHSEQVAAST + + IPNYPSL Q
Sbjct: 17 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 76
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPI--SDFGTKQSKHPSEFFCKTLTA 159
L+CQ+ NVT+HAD ETDE+YAQM+LQP+N++++ P ++ G S+ P+ +FCKTLTA
Sbjct: 77 LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVP-SRQPTNYFCKTLTA 135
Query: 160 SDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 219
SDTSTHGGFSVPRRAAEK+FP LDY+ QPP QEL+ RDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 195
Query: 220 TGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXX 279
TGWS+FV +KRL AGDSVLFI ++ +QL +G+RRANR QT +PSSVLS+DSMH+G+L
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 255
Query: 280 XXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 339
S FTIFYNPRA PSEFVIPLAKY KAVY +++SVGMRF M+FETEES RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315
Query: 340 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPS-LTSSL 398
GTI GI D+DP RW S WR+++V WDE G++Q RVS+W+IE + ++PS L
Sbjct: 316 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 375
Query: 399 KRPLQSGLLENEWGTLLRKPFIKAPESGAMELSSSIPNLYQEQLMKMLFKPQAVN 453
KRP GL P + M +S S P ++ L + F+ VN
Sbjct: 376 KRPWPPGL-----------PSFHGLKEDDMGMSMSSPLMWDRGLQSLNFQGMGVN 419
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 802 FDDSSLLQNNSWQQGSTP-IRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGL 860
D+S LQ++ P T+ KV K+GS GRS+D++ F +Y EL + MFGL+G
Sbjct: 776 IDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQ 835
Query: 861 LNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSG 920
L D SGW+LV+VD E+DVLL+GDDPW EFV V CI+ILSP EVQQM + G++LLNS
Sbjct: 836 LEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSA 895
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/373 (66%), Positives = 300/373 (80%), Gaps = 8/373 (2%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G ++ +NS+LWHACAGPLVSLP VGSLV YFPQGHSEQVAAS ++ T IPNYP+L S+
Sbjct: 15 GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ-TDFIPNYPNLPSK 73
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 160
L+C + +VTLHAD ETDE+YAQM+LQPVN ++E SD G K ++ P+EFFCKTLTAS
Sbjct: 74 LICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTAS 133
Query: 161 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 220
DTSTHGGFSVPRRAAEK+FP LD+++QPP QE+V +DLHD TWTFRHIYRGQPKRHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTT 193
Query: 221 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 280
GWS+FV +KRL AGDSVLF+RDE SQL +G+RRANRQ TL SSV+S+DSMHIG+L
Sbjct: 194 GWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAA 253
Query: 281 XXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMG 340
N SPFTIF+NPRA PSEFV+PLAKY KA+YA Q+S+GMRF MMFETE+ G RRYMG
Sbjct: 254 HANANSSPFTIFFNPRASPSEFVVPLAKYNKALYA-QVSLGMRFRMMFETEDCGVRRYMG 312
Query: 341 TIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTSS 397
T+ GI+D+DP+RW GS+WRN+QV WDE GD+ +RVS+W+IE TP +I P
Sbjct: 313 TVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP--FYICPPPFFR 370
Query: 398 LKRPLQSGLLENE 410
K P Q G+ ++E
Sbjct: 371 PKYPRQPGMPDDE 383
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 109/167 (65%), Gaps = 9/167 (5%)
Query: 751 ERDFQHPQECMVGNL-SCSQDGQSQITSASLAESHAFCLRD--NSGGTSSSHVDFDDSSL 807
++DFQ+ +V N + +D +++++SA+++ S +F + G S+ +DS +
Sbjct: 889 QKDFQN----LVPNYGNTPRDIETELSSAAIS-SQSFGIPSIPFKPGCSNEVGGINDSGI 943
Query: 808 LQNNS-WQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKG 866
+ W + +RTYTKVQK GSVGRSIDVT + Y+EL + MFG++G L D
Sbjct: 944 MNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLT 1003
Query: 867 SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 913
S WKLVY D+E+D+LLVGDDPWEEFV CV+ I+ILS EVQQMS +G
Sbjct: 1004 SDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDG 1050
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 503 bits (1294), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/438 (60%), Positives = 322/438 (73%), Gaps = 16/438 (3%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G RR +NSELWHACAGPL+SLP GSLV YFPQGHSEQVAAS ++ T IP+YP+L S+
Sbjct: 16 GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQ-TDFIPSYPNLPSK 74
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 160
L+C + NVTL+AD ETDE+YAQM+LQPVN +++ SD G K ++ P+EFFCKTLTAS
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 161 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 220
DTSTHGGFSVPRRAAEK+FP LD+++QPP QELV +D+HDNTWTFRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 221 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 280
GWS+FV +KRL AGDSVLFIRD +QL +G+RRANRQQ L SSV+S+DSMHIGVL
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 281 XXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMG 340
N SPFTIFYNPRA P+EFV+PLAKY KA+YA Q+S+GMRF M+FETEE G RRYMG
Sbjct: 255 HANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYMG 313
Query: 341 TIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTSS 397
T+ GI+D+DP+RW S+WRN+Q+ WDE GD+ +RVSVWDIE TP +I P
Sbjct: 314 TVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFFR 371
Query: 398 LKRPLQSGLLENE--WGTLLRKPFIKAPESGAMELSSS--IPNLYQEQLMKMLFK----P 449
+ Q G+ ++E + L++ S M+ SS P L Q M M + P
Sbjct: 372 PRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLP 431
Query: 450 QAVNNNGAFPSLMQQESA 467
A G FPS++ +A
Sbjct: 432 SAAAQPGFFPSMLSPTAA 449
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 797 SSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFG 856
S+ + +D+ +L W + +RTYTKVQK GSVGRSIDV ++ Y+EL + MFG
Sbjct: 1013 SNDLAVNDAGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFG 1072
Query: 857 LDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 913
++G L D + S WKLVYVD+E+D+LLVGDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 1073 IEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1129
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/439 (59%), Positives = 322/439 (73%), Gaps = 17/439 (3%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G RR +NSELWHACAGPL+SLP GSLV YFPQGHSEQVAAS ++ T IP+YP+L S+
Sbjct: 16 GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQ-TDFIPSYPNLPSK 74
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 160
L+C + NVTL+AD ETDE+YAQM+LQPVN +++ SD G K ++ P+EFFCKTLTAS
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 161 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 220
DTSTHGGFSVPRRAAEK+FP LD+++QPP QELV +D+HDNTWTFRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 221 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 280
GWS+FV +KRL AGDSVLFIRD +QL +G+RRANRQQ L SSV+S+DSMHIGVL
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 281 XXXXNRSPFTIFYNPR-ACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 339
N SPFTIFYNPR A P+EFV+PLAKY KA+YA Q+S+GMRF M+FETEE G RRYM
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYM 313
Query: 340 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTS 396
GT+ GI+D+DP+RW S+WRN+Q+ WDE GD+ +RVSVWDIE TP +I P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFF 371
Query: 397 SLKRPLQSGLLENE--WGTLLRKPFIKAPESGAMELSSS--IPNLYQEQLMKMLFK---- 448
+ Q G+ ++E + L++ S M+ SS P L Q M M +
Sbjct: 372 RPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQL 431
Query: 449 PQAVNNNGAFPSLMQQESA 467
P A G FPS++ +A
Sbjct: 432 PSAAAQPGFFPSMLSPTAA 450
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 797 SSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFG 856
S+ + +D+ +L W + +RTYTKVQK GSVGRSIDV ++ Y+EL + MFG
Sbjct: 1014 SNDLAVNDAGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFG 1073
Query: 857 LDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 913
++G L D + S WKLVYVD+E+D+LLVGDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 1074 IEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1130
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/439 (59%), Positives = 322/439 (73%), Gaps = 17/439 (3%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G RR +NSELWHACAGPL+SLP GSLV YFPQGHSEQVAAS ++ T IP+YP+L S+
Sbjct: 16 GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQ-TDFIPSYPNLPSK 74
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNS-EKEVFPISDFGTKQSKHPSEFFCKTLTAS 160
L+C + NVTL+AD ETDE+YAQM+LQPVN +++ SD G K ++ P+EFFCKTLTAS
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 161 DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 220
DTSTHGGFSVPRRAAEK+FP LD+++QPP QELV +D+HDNTWTFRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 221 GWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXX 280
GWS+FV +KRL AGDSVLFIRD +QL +G+RRANRQQ L SSV+S+DSMHIGVL
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 281 XXXXNRSPFTIFYNPR-ACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 339
N SPFTIFYNPR A P+EFV+PLAKY KA+YA Q+S+GMRF M+FETEE G RRYM
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEECGVRRYM 313
Query: 340 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE---TPESLFIFPSLTS 396
GT+ GI+D+DP+RW S+WRN+Q+ WDE GD+ +RVSVWDIE TP +I P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFF 371
Query: 397 SLKRPLQSGLLENE--WGTLLRKPFIKAPESGAMELSSS--IPNLYQEQLMKMLFK---- 448
+ Q G+ ++E + L++ S M+ SS P L Q M M +
Sbjct: 372 RPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQL 431
Query: 449 PQAVNNNGAFPSLMQQESA 467
P A G FPS++ +A
Sbjct: 432 PSAAAQPGFFPSMLSPTAA 450
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%)
Query: 797 SSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFG 856
S+ + +D+ +L W + +RTYTKVQK GSVGRSIDV ++ Y+EL + MFG
Sbjct: 1014 SNDLAVNDAGVLGGGLWPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFG 1073
Query: 857 LDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEG 913
++G L D + S WKLVYVD+E+D+LLVGDDPWEEFV CV+ I+ILS +EVQQMS +G
Sbjct: 1074 IEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1130
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/364 (64%), Positives = 282/364 (77%), Gaps = 4/364 (1%)
Query: 45 RTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLC 104
+ LNSELWHACAGPLVSLP GS V YFPQGHSEQVAA+T + IPNYPSL QL+C
Sbjct: 17 KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76
Query: 105 QVQNVTLHADKETDEIYAQMSLQPVNSE--KEVFPISDFGTKQSKHPSEFFCKTLTASDT 162
Q+ NVT+HAD ETDE+YAQM+LQP+ E KE F + G SK PS +FCKTLTASDT
Sbjct: 77 QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP-SKQPSNYFCKTLTASDT 135
Query: 163 STHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGW 222
STHGGFSVPRRAAEK+FP LDYT+QPP QEL+ RDLHD W FRHI+RGQPKRHLLTTGW
Sbjct: 136 STHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 195
Query: 223 SLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXX 282
S+FV +KRL AGDSV+FIR+E +QL +G+R A R QT +PSSVLS+DSMHIG+L
Sbjct: 196 SVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHA 255
Query: 283 XXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTI 342
S FT+F++PRA SEFVI L+KY KAV+ +++SVGMRF M+FETEES RRYMGTI
Sbjct: 256 SATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 315
Query: 343 VGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTS-SLKRP 401
GI+D+D +RWP S WR+++V WDE G++Q RVS+W+IE + ++PSL LKRP
Sbjct: 316 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 375
Query: 402 LQSG 405
+G
Sbjct: 376 WHAG 379
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 776 TSASLAESHAFCLRDNSGGTSSSHVDFDDSS--LLQNNSWQQGSTPIRTYTKVQKAGSVG 833
+S+ AE+ L D SG +S + D++ LL S + + KV K+GSVG
Sbjct: 659 SSSGDAEASPMSLTD-SGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVG 717
Query: 834 RSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWE 889
RS+D++ F +Y EL + MF ++GLL D SGW+LV+VD E+D+LL+GDDPWE
Sbjct: 718 RSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWE 773
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/364 (64%), Positives = 282/364 (77%), Gaps = 4/364 (1%)
Query: 45 RTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLC 104
+ LNSELWHACAGPLVSLP GS V YFPQGHSEQVAA+T + IPNYPSL QL+C
Sbjct: 17 KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76
Query: 105 QVQNVTLHADKETDEIYAQMSLQPVNSE--KEVFPISDFGTKQSKHPSEFFCKTLTASDT 162
Q+ NVT+HAD ETDE+YAQM+LQP+ E KE F + G SK PS +FCKTLTASDT
Sbjct: 77 QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP-SKQPSNYFCKTLTASDT 135
Query: 163 STHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGW 222
STHGGFSVPRRAAEK+FP LDYT+QPP QEL+ RDLHD W FRHI+RGQPKRHLLTTGW
Sbjct: 136 STHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 195
Query: 223 SLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXX 282
S+FV +KRL AGDSV+FIR+E +QL +G+R A R QT +PSSVLS+DSMHIG+L
Sbjct: 196 SVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHA 255
Query: 283 XXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTI 342
S FT+F++PRA SEFVI L+KY KAV+ +++SVGMRF M+FETEES RRYMGTI
Sbjct: 256 SATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 315
Query: 343 VGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTS-SLKRP 401
GI+D+D +RWP S WR+++V WDE G++Q RVS+W+IE + ++PSL LKRP
Sbjct: 316 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 375
Query: 402 LQSG 405
+G
Sbjct: 376 WHAG 379
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 776 TSASLAESHAFCLRDNSGGTSSSHVDFDDSS--LLQNNSWQQGSTPIRTYTKVQKAGSVG 833
+S+ AE+ L D SG +S + D++ LL S + + KV K+GSVG
Sbjct: 659 SSSGDAEASPMSLTD-SGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVG 717
Query: 834 RSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVG 893
RS+D++ F +Y EL + MF ++GLL D SGW+LV+VD E+D+LL+GDDPWE FV
Sbjct: 718 RSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVN 777
Query: 894 CVRCIRILSPSEVQQMSEEG 913
V I+ILSP +V QM + G
Sbjct: 778 NVWYIKILSPEDVHQMGDHG 797
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 244/364 (67%), Gaps = 21/364 (5%)
Query: 28 TQNLVAEMKLLKDCGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRT 87
T++ AE L + + R ELWHACAGPLV++P+ V+YFPQGH EQV AST +
Sbjct: 43 TRSAAAERALDPEAALYR----ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 88 ATSQIPNYPSLQSQLLCQVQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPIS 139
A Q+P Y L S+LLC+V NV L A+ +TDE+YAQ++L P + E + P
Sbjct: 99 AEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPP 157
Query: 140 DFGTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLH 199
F FCKTLTASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH
Sbjct: 158 RFQVHS-------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLH 210
Query: 200 DNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQT 259
N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ
Sbjct: 211 ANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 270
Query: 260 TLPSSVLSADSMHIGVLXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLS 319
+PSSV+S+ SMH+GVL + FT++Y PR PSEF++P +Y ++V + S
Sbjct: 271 NVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYS 329
Query: 320 VGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSV 379
+GMRF M FE EE+ ++R+ GTIVGI + DP RWP SKWR+++V WDE + +RVS
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 380 WDIE 383
W +E
Sbjct: 390 WKVE 393
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 771 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 825
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 826 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 884
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 885 DDPWEEFVGCVRCIRILSPSEVQQMS 910
DDPW+EF VR I I + EV++M+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 244/364 (67%), Gaps = 21/364 (5%)
Query: 28 TQNLVAEMKLLKDCGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRT 87
T++ AE L + + R ELWHACAGPLV++P+ V+YFPQGH EQV AST +
Sbjct: 43 TRSAAAERALDPEAALYR----ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 88 ATSQIPNYPSLQSQLLCQVQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPIS 139
A Q+P Y L S+LLC+V NV L A+ +TDE+YAQ++L P + E + P
Sbjct: 99 AEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPP 157
Query: 140 DFGTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLH 199
F FCKTLTASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH
Sbjct: 158 RFQVHS-------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLH 210
Query: 200 DNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQT 259
N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ
Sbjct: 211 ANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 270
Query: 260 TLPSSVLSADSMHIGVLXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLS 319
+PSSV+S+ SMH+GVL + FT++Y PR PSEF++P +Y ++V + S
Sbjct: 271 NVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYS 329
Query: 320 VGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSV 379
+GMRF M FE EE+ ++R+ GTIVGI + DP RWP SKWR+++V WDE + +RVS
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 380 WDIE 383
W +E
Sbjct: 390 WKVE 393
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 771 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 825
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 826 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 884
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 885 DDPWEEFVGCVRCIRILSPSEVQQMS 910
DDPW+EF VR I I + EV++M+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 244/364 (67%), Gaps = 21/364 (5%)
Query: 28 TQNLVAEMKLLKDCGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRT 87
T++ AE L + + R ELWHACAGPLV++P+ V+YFPQGH EQV AST +
Sbjct: 43 TRSAAAERALDPEAALYR----ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 88 ATSQIPNYPSLQSQLLCQVQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPIS 139
A Q+P Y L S+LLC+V NV L A+ +TDE+YAQ++L P + E + P
Sbjct: 99 AEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPP 157
Query: 140 DFGTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLH 199
F FCKTLTASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH
Sbjct: 158 RFQVHS-------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLH 210
Query: 200 DNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQT 259
N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ
Sbjct: 211 ANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 270
Query: 260 TLPSSVLSADSMHIGVLXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLS 319
+PSSV+S+ SMH+GVL + FT++Y PR PSEF++P +Y ++V + S
Sbjct: 271 NVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYS 329
Query: 320 VGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSV 379
+GMRF M FE EE+ ++R+ GTIVGI + DP RWP SKWR+++V WDE + +RVS
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 380 WDIE 383
W +E
Sbjct: 390 WKVE 393
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 771 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 825
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 826 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 884
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 885 DDPWEEFVGCVRCIRILSPSEVQQMS 910
DDPW+EF VR I I + EV++M+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/364 (51%), Positives = 244/364 (67%), Gaps = 21/364 (5%)
Query: 28 TQNLVAEMKLLKDCGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRT 87
T++ AE L + + R ELWHACAGPLV++P+ V+YFPQGH EQV AST +
Sbjct: 43 TRSAAAERALDPEAALYR----ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQA 98
Query: 88 ATSQIPNYPSLQSQLLCQVQNVTLHADKETDEIYAQMSLQP--------VNSEKEVFPIS 139
A Q+P Y L S+LLC+V NV L A+ +TDE+YAQ++L P + E + P
Sbjct: 99 AEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPP 157
Query: 140 DFGTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLH 199
F FCKTLTASDTSTHGGFSV RR A++ P LD + QPPTQELV +DLH
Sbjct: 158 RFQVHS-------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLH 210
Query: 200 DNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQT 259
N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E +LRVGVRRA RQQ
Sbjct: 211 ANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 270
Query: 260 TLPSSVLSADSMHIGVLXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLS 319
+PSSV+S+ SMH+GVL + FT++Y PR PSEF++P +Y ++V + S
Sbjct: 271 NVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYS 329
Query: 320 VGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSV 379
+GMRF M FE EE+ ++R+ GTIVGI + DP RWP SKWR+++V WDE + +RVS
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 380 WDIE 383
W +E
Sbjct: 390 WKVE 393
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 24/173 (13%)
Query: 771 GQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNS-----WQQGSTPIRTYTK 825
G +QI S + + L D S G+ S++ + Q N+ Q + R+ TK
Sbjct: 683 GLTQIASPKVQD-----LSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTK 737
Query: 826 VQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVG 884
V K G ++GRS+D++ F+NYEEL+ ++ +F +G L K W +VY D E+D++LVG
Sbjct: 738 VHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEENDMMLVG 796
Query: 885 DDPWEEFVGCVRCIRILSPSEVQQM--------SEE----GMKLLNSGALQGI 925
DDPW+EF VR I I + EV++M SEE G +L+ +G G+
Sbjct: 797 DDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVDGGRLVETGEQNGM 849
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 46 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 105
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 163
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 164 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 223
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 224 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 283
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 284 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 343
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 344 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 397
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 398 LKRPLQSGL 406
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 820 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 877
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 536 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 593
Query: 878 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 919
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 594 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 635
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 46 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 105
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 163
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 164 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 223
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 224 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 283
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 284 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 343
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 344 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 397
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 398 LKRPLQSGL 406
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 820 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 877
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 598
Query: 878 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 919
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 46 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 105
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 163
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 164 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 223
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 224 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 283
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 284 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 343
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 344 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 397
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 398 LKRPLQSGL 406
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 820 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 877
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 598
Query: 878 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 919
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 353 bits (906), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 242/369 (65%), Gaps = 15/369 (4%)
Query: 46 TLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQ 105
L ELWHACAGPLV+LP+ G VYYFP+GH EQ+ AS + Q+P++ +L S++LC+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQS--KHPSEFFCKTLTASDTS 163
V N+ A+ ETDE+YAQ++L P + E P S Q K FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSE--PTSPDAPVQEPEKCTVHSFCKTLTASDTS 134
Query: 164 THGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWS 223
THGGFSV RR A+ P LD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 224 LFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXX 283
+FV SK+L AGD+ +F+R E +LRVGVRR RQQT +PSSV+S+ SMHIGVL
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 284 XNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIV 343
+ F++FY PR SEF++ + +Y +A +LSVGMRF M FE EE+ ++R+ GTIV
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 344 GINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE------TPESLFIFPSLTSS 397
G+ + W S+WR+++V+WDEP + RVS W++E TP S P
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQ---PQPPQR 370
Query: 398 LKRPLQSGL 406
KRP GL
Sbjct: 371 NKRPRPPGL 379
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 820 IRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYE 877
IR+ TKV GS VGR+ID+T + YE+L + +E MF + G LL TK W++VY D E
Sbjct: 538 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK--WQVVYTDDE 595
Query: 878 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 919
D+++VGDDPW EF G VR I I +P EV+++S + +N+
Sbjct: 596 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 637
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 235/350 (67%), Gaps = 8/350 (2%)
Query: 47 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQ-IPNYPSLQSQLLCQ 105
L +ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + Q IP + +L ++LC+
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTH 165
V +VTL A+ ETDE+YAQ++LQP + E + + +K + F K LTASDTSTH
Sbjct: 77 VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTH 136
Query: 166 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 225
GGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 137 GGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 196
Query: 226 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 285
V SKRL AGD+ +F+R E LRVGVRR +QQ+T+P+SV+S+ SM +GVL
Sbjct: 197 VTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTT 256
Query: 286 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 345
+ F +FY PR S+F+I + KY A+ + S+GMR+ M FE EES +R + GTI+G
Sbjct: 257 TTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIGS 313
Query: 346 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE--TPESLFIFPS 393
D+ +WP SKWR++Q++WDEP + N+VS W+IE +P +L P+
Sbjct: 314 GDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 362
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 770 DGQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKA 829
D S+ SA++ D++ S++ +SS QQ ST R+ KVQ
Sbjct: 441 DLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTST--RSRIKVQMQ 498
Query: 830 G-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPW 888
G +VGR++D+T ++Y+ELI+ +E MF ++G L + W +V+ D E D +LVGDDPW
Sbjct: 499 GTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL--SPKDKWAIVFTDDEGDRMLVGDDPW 556
Query: 889 EEFVGCVRCIRILSPSEVQQMSEEGM 914
EF + + I EV++M + +
Sbjct: 557 NEFCKMAKKLFIYPSDEVKKMRSKSL 582
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 342 bits (878), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 235/350 (67%), Gaps = 8/350 (2%)
Query: 47 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQ-IPNYPSLQSQLLCQ 105
L +ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + Q IP + +L ++LC+
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 97
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTH 165
V +VTL A+ ETDE+YAQ++LQP + E + + +K + F K LTASDTSTH
Sbjct: 98 VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTH 157
Query: 166 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 225
GGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 158 GGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 217
Query: 226 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 285
V SKRL AGD+ +F+R E LRVGVRR +QQ+T+P+SV+S+ SM +GVL
Sbjct: 218 VTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTT 277
Query: 286 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 345
+ F +FY PR S+F+I + KY A+ + S+GMR+ M FE EES +R + GTI+G
Sbjct: 278 TTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIGS 334
Query: 346 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE--TPESLFIFPS 393
D+ +WP SKWR++Q++WDEP + N+VS W+IE +P +L P+
Sbjct: 335 GDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 383
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 770 DGQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKA 829
D S+ SA++ D++ S++ +SS QQ ST R+ KVQ
Sbjct: 462 DLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTST--RSRIKVQMQ 519
Query: 830 G-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPW 888
G +VGR++D+T ++Y+ELI+ +E MF ++G L + W +V+ D E D +LVGDDPW
Sbjct: 520 GTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL--SPKDKWAIVFTDDEGDRMLVGDDPW 577
Query: 889 EEFVGCVRCIRILSPSEVQQMSEEGM 914
EF + + I EV++M + +
Sbjct: 578 NEFCKMAKKLFIYPSDEVKKMRSKSL 603
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 342 bits (878), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 242/376 (64%), Gaps = 21/376 (5%)
Query: 47 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQV 106
+ SELWHACAGPL LP+ G++V YFPQGH EQ A + ++ +IP + L Q++C+V
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSY-SSPLEIPKF-DLNPQIVCRV 119
Query: 107 QNVTLHADKETDEIYAQMSLQPV------NSE-KEVFPISD----FGTKQSKHPSEFFCK 155
NV L A+K+TDE+Y Q++L P+ N E KEV + G+ K FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179
Query: 156 TLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKR 215
TLTASDTSTHGGFSVPRRAAE F LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239
Query: 216 HLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGV 275
HLLTTGWS+FV K L +GD+VLF+RDE +LR+G+RRA R + LP S++ +S +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298
Query: 276 LXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGK 335
L +S F +FY+PRA +EFVIP KY ++ S + +G RF M FE ++S +
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357
Query: 336 RRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLT 395
RR G + G+ D+DP RWP SKWR + V WDE D Q RVS W+I+ SL P L+
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSL---PHLS 414
Query: 396 -SSLKRPLQ--SGLLE 408
S RP + +GLL+
Sbjct: 415 IQSSPRPKRPWAGLLD 430
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 817 STPIRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVD 875
S+ R TKV K GS VGR+ID++ Y++L+ +E +F ++GLL D + GW+++Y D
Sbjct: 661 SSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE-KGWRILYTD 719
Query: 876 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGAL 922
E+D+++VGDDPW +F V I + + EV+ +++ L AL
Sbjct: 720 SENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCLEQAAL 766
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 335 bits (860), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 171/338 (50%), Positives = 224/338 (66%), Gaps = 6/338 (1%)
Query: 47 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQ-IPNYPSLQSQLLCQ 105
L +ELW CAGPLV +P+ V+YFPQGH EQ+ AST + S+ IP + L ++LC+
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80
Query: 106 VQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTH 165
V +VTL A+ ETDE+YAQ++LQP + E + +K F K LTASDTSTH
Sbjct: 81 VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTH 140
Query: 166 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 225
GGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 141 GGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 200
Query: 226 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 285
V SKRL AGD+ +F+R E LRVGVRR R Q+T+P+SV+S+ SMH+GVL
Sbjct: 201 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRT 260
Query: 286 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 345
+ F +FY PR S+F++ + KY +A+ S+G RF M FE EES +R + GTIVG
Sbjct: 261 TTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIVGS 317
Query: 346 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
D+ +WP SKWR++QV+WDEP + ++VS W+IE
Sbjct: 318 GDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE 354
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 821 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDG-LLNDTKGSGWKLVYVDYES 878
R+ TKVQ G +VGR++D+T K+Y+ELI +E MF + G LL K W +V+ D E
Sbjct: 489 RSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK---WIVVFTDDEG 545
Query: 879 DVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
D++L GDDPW EF + I I S EV++M+
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 577
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 247/387 (63%), Gaps = 25/387 (6%)
Query: 47 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQV 106
L ELW CAGPLV +PQ VYYFPQGH EQ+ AST++ + + L ++LC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 107 QNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPS-EFFCKTLTASDTSTH 165
NV+L A+K+TDE+YAQ++L PV +E + D + + P F K LTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 166 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 225
GGFSV R+ A + P LD T Q PTQELV D+H W F+HI+RGQP+RHLLTTGWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 226 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 285
V SKRL AGD+ +F+R E +LRVGVRRAN QQ+++PSSV+S+ SMH+GVL
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 286 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 345
++ F ++Y PR S+F+I L KY +A+ +++ SVGMRF M FE E+S +RRY GT++G+
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRYSGTVIGV 305
Query: 346 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE-------TPESLFIFPSLTSSL 398
D P W SKWR ++V WDEP + N+VS W+IE P+S+ +
Sbjct: 306 KDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVML------KN 358
Query: 399 KRPLQ----SGL---LENEWGTLLRKP 418
KRP Q S L N W ++L +P
Sbjct: 359 KRPRQVSEVSALGITASNLWSSVLTQP 385
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 817 STPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVD 875
S+ R+ TKVQ G VGR++D+ K Y ELI IE +F + G L + W++V+ D
Sbjct: 517 SSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSR--NQWEIVFTD 574
Query: 876 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
E D++LVGDDPW EF V+ I I S EV++M+
Sbjct: 575 DEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 609
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 229/338 (67%), Gaps = 5/338 (1%)
Query: 47 LNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQV 106
L ELW CAGPLV +PQ VYYFPQGH EQ+ AST++ + + L ++LC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 107 QNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPS-EFFCKTLTASDTSTH 165
NV+L A+K+TDE+YAQ++L PV +E + D + + P F K LTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 166 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 225
GGFSV R+ A + P LD T Q PTQELV D+H W F+HI+RGQP+RHLLTTGWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 226 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 285
V SKRL AGD+ +F+R E +LRVGVRRAN QQ+++PSSV+S+ SMH+GVL
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 286 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 345
++ F ++Y PR S+F+I L KY +A+ +++ SVGMRF M FE E+S +RRY GT++G+
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRYSGTVIGV 305
Query: 346 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
D P W SKWR ++V WDEP + N+VS W+IE
Sbjct: 306 KDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 817 STPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVD 875
S+ R+ TKVQ G VGR++D+ K Y ELI IE +F + G L + W++V+ D
Sbjct: 519 SSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSR--NQWEIVFTD 576
Query: 876 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
E D++LVGDDPW EF V+ I I S EV++M+
Sbjct: 577 DEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 320 bits (819), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/349 (48%), Positives = 218/349 (62%), Gaps = 19/349 (5%)
Query: 50 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 109
ELWHACAGPL+SLP+ GSLV YFPQGH EQ A A +P + + C++ +V
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ--APDFSAAIYGLPPH------VFCRILDV 105
Query: 110 TLHADKETDEIYAQMSLQPVNSEKE------VFPIS----DFGTKQSKHPSEFFCKTLTA 159
LHA+ TDE+YAQ+SL P + + E + + D+ + + FCKTLTA
Sbjct: 106 KLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTA 165
Query: 160 SDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 219
SDTSTHGGFSVPRRAAE FP LDY+ P+QEL+ RDLH W FRHIYRGQP+RHLLT
Sbjct: 166 SDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLT 225
Query: 220 TGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXX 279
TGWS FV K+L +GD+VLF+R + +LR+GVRRA++ + T S +M+
Sbjct: 226 TGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEV 285
Query: 280 XXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 339
S F+I YNP+A S F+IP K+ K V +GMRF E+E++ +RR
Sbjct: 286 AHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV-DYPFCIGMRFKARVESEDASERRSP 344
Query: 340 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESL 388
G I GI+D+DP+RWPGSKWR + V WD+ Q RVS W+IE S+
Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSI 393
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 233/397 (58%), Gaps = 19/397 (4%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G + + +LW CAGPL +P++G VYYFPQG+ E V ASTR P L S+
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSK 77
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASD 161
L C+V + L + +DEIYA+++L P ++ + V P + + F K LTASD
Sbjct: 78 LQCRVIAIHLKVENNSDEIYAEITLMP-DTTQVVIPTQ--SENRFRPLVNSFTKVLTASD 134
Query: 162 TSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG 221
TS +GGFSVP++ A + P LD + P QE++ DLHDN W FRH YRG P+RH LTTG
Sbjct: 135 TSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTG 194
Query: 222 WSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXX 281
W+ F+ SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+
Sbjct: 195 WNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254
Query: 282 XXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGT 341
N+ F + Y PR+ S+F++ K+ AV ++ +VG RF M FE ++ +RRY GT
Sbjct: 255 AFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYFGT 311
Query: 342 IVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSLKRP 401
I+G++D P W S+WR+++V+WDE + N+VS W+IE + P+L
Sbjct: 312 IIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE-----HLVPALNVPRSSL 365
Query: 402 LQSGLLE--NEWGT----LLRKPFIKAPESGAMELSS 432
L++ L NE+G+ LL + E G + ++S
Sbjct: 366 LKNKRLREVNEFGSSSSHLLPPILTQGQEIGQLSVAS 402
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 821 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 879
RT TKVQ G ++GR++D++ Y++LI +E +F + G L + WK+ + D +
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTR--NQWKIAFTDSDGY 568
Query: 880 VLLVGDDPWEEFVGCVRCIRILSPSEVQ 907
+LVGDDPW EF V+ I I S EV+
Sbjct: 569 EMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 287 bits (734), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 211/344 (61%), Gaps = 12/344 (3%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIP--NYPSLQ 99
G + + +LW CAGPL +P++G VYYFPQGH E V ASTR P ++PS
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPS-- 76
Query: 100 SQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTA 159
+L C+V + L + +DE YA+++L P ++ + V P + Q + F K LTA
Sbjct: 77 -KLQCRVIAIQLKVENNSDETYAEITLMP-DTTQVVIPTQN--QNQFRPLVNSFTKVLTA 132
Query: 160 SDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 219
SDTS HGGFSVP++ A + P LD + PTQE++ DLH N W FRHIYRG +RHLLT
Sbjct: 133 SDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLT 192
Query: 220 TGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXX 279
GW+ F SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S +SM G++
Sbjct: 193 IGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASA 252
Query: 280 XXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYM 339
N+ F + Y PR+ S+F++ K+ V ++ +VG RF M FE ++ +RR
Sbjct: 253 KHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERRSF 309
Query: 340 GTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
GTI+G++D P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 352
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 821 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 879
RT TKVQ G ++GR++D++ Y++LI +E +F L G L + W++ + + E D
Sbjct: 510 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEIAFTNNEED 567
Query: 880 VLLVGDDPWEEFVGCVRCIRILSPSEVQQM 909
+LVG+DPW EF V+ I I S EV+ +
Sbjct: 568 KMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 205/342 (59%), Gaps = 8/342 (2%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G + + +LW CAGPL +P++G VYYFPQGH E V STR P L S+
Sbjct: 19 GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPSK 77
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASD 161
L C+V + L + +DE YA+++L P ++ + V P + Q + F K LTASD
Sbjct: 78 LQCRVIAIHLKVENNSDETYAEITLMP-DTTQVVIPTQN--ENQFRPLVNSFTKVLTASD 134
Query: 162 TSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG 221
TS HGGF VP++ A + P LD + P QEL+ DLH N W F H YRG P+RHLLTTG
Sbjct: 135 TSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTG 194
Query: 222 WSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXX 281
W+ F SK+L AGD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+
Sbjct: 195 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKH 254
Query: 282 XXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGT 341
N+ FT+ Y PR+ S+F++ K+ AV ++ +VG RF M E ++ +RR GT
Sbjct: 255 AFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERRCFGT 311
Query: 342 IVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
I+G++D P W S+WR+++V+WDE +VS WDIE
Sbjct: 312 IIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIE 352
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 821 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 879
RT TKVQ G ++GR++D++ Y++LI +E +F + G L + W++ + D + D
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTR--NQWEIAFTDSDED 568
Query: 880 VLLVGDDPWEEFVGCVRCIRI 900
+LVGDDPW EF V+ I I
Sbjct: 569 KMLVGDDPWPEFCNMVKKIFI 589
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 278 bits (712), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 215/369 (58%), Gaps = 20/369 (5%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G + + +LW CAGPL +P++G VYYFPQG+ E V ASTR P L S+
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSK 77
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASD 161
L C+V + L + +DE YA+++L P ++ + V P Q + F K LTASD
Sbjct: 78 LQCRVIAIHLKVENNSDETYAEITLMP-DTTQVVIPTQ--SENQFRPLVNSFTKVLTASD 134
Query: 162 TSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG 221
TS +GGF VP++ A + P L P QEL+ +DLH N W FRH YRG P+RH LTTG
Sbjct: 135 TSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTG 190
Query: 222 WSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXX 281
W+ F SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+
Sbjct: 191 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 250
Query: 282 XXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGT 341
N+ F + Y P S+F++ K+ A+ ++ VG RF M FE ++ +RRY GT
Sbjct: 251 ALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERRYFGT 309
Query: 342 IVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSLKRP 401
I+G+ND P W S+WR+++V+WDE + N+VS W+IE L S+L P
Sbjct: 310 IIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE---------HLMSALNVP 359
Query: 402 LQSGLLENE 410
+S LL+N+
Sbjct: 360 -RSSLLKNK 367
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 806 SLLQNNSWQQGSTPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDT 864
S ++ S Q GST RT TKVQ G ++GR++D++ Y++LI +E +F L G L
Sbjct: 482 SPIEIQSKQFGST--RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTR 539
Query: 865 KGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQ 907
+ WK+ + D + +LVGDDPW EF V+ I I S EV+
Sbjct: 540 --NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 232/403 (57%), Gaps = 24/403 (5%)
Query: 50 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 109
+LW CAGPL +P++G VYYFPQG+ E V ASTR P L S+L C+V +
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85
Query: 110 TLHADKETDEIYAQMSLQPVNSEKE----VFPISDFGTKQSKHPSEFFCKTLTASDTSTH 165
L + +DE YA+++L P + E V P + Q + F K LTASD S +
Sbjct: 86 HLKVENNSDETYAKITLMPDTTVSENLQVVIPTQN--ENQFRPLVNSFTKVLTASDISAN 143
Query: 166 GGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLF 225
G FSVP++ A + P LD + P QEL+ DLH N W+FRH YRG P+RHLLTTGW+ F
Sbjct: 144 GVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEF 203
Query: 226 VGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXN 285
SK+L GD ++F+R E +LRVG+RRA QQ +PSS++S D M GV+ N
Sbjct: 204 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDN 263
Query: 286 RSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGI 345
+ F + Y PR+ S+F++ K+ AV ++ +VG RF M FE ++ +RRY GTI+G+
Sbjct: 264 QCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTIIGV 320
Query: 346 NDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSLKRPLQSG 405
++ P W S WR+++V+WDE + N+VS W+IE + P+L L++
Sbjct: 321 SNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIE-----HLMPALNVPRSSFLKNK 374
Query: 406 LLE--NEWGT----LLRKPFIKAPESGAMELSS--SIPNLYQE 440
L NE+G+ LL + E G + ++S +I LY+E
Sbjct: 375 RLREVNEFGSSSSHLLPPILTQGQEIGQLSVASPMNISLLYRE 417
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 821 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 879
RT TKVQ G ++GR++D++ Y++LI +E +F L G L + WK+++ + D
Sbjct: 516 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTR--NQWKIIFTGSDED 573
Query: 880 VLLVGDDPWEEFVGCVRCIRI 900
+LVGDDPW EF V+ I I
Sbjct: 574 EMLVGDDPWPEFCNMVKRIYI 594
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 270 bits (689), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 210/342 (61%), Gaps = 10/342 (2%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G + + +LW CAGPL +P++G +YYFPQG+ E V ASTR P L S+
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSK 77
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTASD 161
L C+V + L + +DE YA+++L P ++ + V P + Q + F K LTASD
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMP-DTTQVVIPTQN--ENQFRPLVNSFTKVLTASD 134
Query: 162 TSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG 221
TS GGF VP++ A + P LD + PTQEL+ DLH N W F H YRG P+RHLLTTG
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 222 WSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXX 281
W+ F SK+L AGD ++F+R E +LRVG+RRA QQ +PSS++S +SM GV+
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKH 252
Query: 282 XXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGT 341
N+ F + Y PR+ S+F++ K+ AV ++ +VG RF M FE ++ +RRY GT
Sbjct: 253 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYFGT 309
Query: 342 IVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
I+G++D P W S+WRN++V+WDE + N+VS W+IE
Sbjct: 310 IIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIE 350
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 821 RTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 879
RT TKVQ G ++ R++D++ Y++LI +E +F L G L + W++ + D + D
Sbjct: 509 RTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTR--NQWEIAFTDSDDD 566
Query: 880 VLLVGDDPWEEFVGCVRCIRIL 901
+LVGDDPW EF V+ I I
Sbjct: 567 KMLVGDDPWPEFCNMVKKILIF 588
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 266 bits (681), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 203/337 (60%), Gaps = 12/337 (3%)
Query: 50 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 109
+LW+ CAGPL LP+ G VYYFPQGH E + STR P + L S+L C+V +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLRCRVVAI 83
Query: 110 TLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP-SEFFCKTLTASDTSTHGGF 168
DK TDE+YAQ+SL P +E ++ T ++ P FF K LTASD S GG
Sbjct: 84 DRKVDKNTDEVYAQISLMPDTTEV----MTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 169 SVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT--GWSLFV 226
+P++ A + FP LD + TQ LV +DL+ W+F+H++RG P+RH+ T+ GWS+F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 227 GSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNR 286
+KRL GD + +R E +LR G+RRA QQ +PSSV+SA+ M GV+ +
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 259
Query: 287 SPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGIN 346
F + Y P + S+FVI K+ A+ + + VG RF M FE ++ ++RY GTI+G+N
Sbjct: 260 CMFNVVYKPSS--SQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGVN 316
Query: 347 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
D+ P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 317 DMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 352
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 203/385 (52%), Gaps = 54/385 (14%)
Query: 45 RTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLC 104
++L+ +LWHACAG +V +P + S V+YF QGH+E A A P P L +LC
Sbjct: 5 KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHA----PRVPPL---ILC 57
Query: 105 QVQNVTLHADKETDEIYAQMSLQPV---------NSEKEVFPISDFGTKQSKHPSEFFCK 155
+V +V AD ETDE++A+++L P+ ++ + P S G K F K
Sbjct: 58 RVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAK 117
Query: 156 TLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKR 215
TLT SD + GGFSVPR AE +FP+LDY+ +PP Q ++ +D+H TW FRHIYRG P+R
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177
Query: 216 HLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANR------------------- 256
HLLTTGWS FV K+L AGDS++F+R E L VG+RRA R
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGF 237
Query: 257 ----QQTTLPSSVL--------SADSMHIGVLXXXXXXXXNRS-----PFTIFYNPRACP 299
+ TT S ++ ++ G + F + Y PRA
Sbjct: 238 LRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRAST 297
Query: 300 SEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGK-RRYMGTIVGINDVDPLRWPGSKW 358
EF + A R A+ S GMRF M FETE+S + +MGT+ + DP+RWP S W
Sbjct: 298 PEFCVKAADVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 356
Query: 359 RNIQVEWDEPGCGDKQNRVSVWDIE 383
R +QV WDEP RVS W +E
Sbjct: 357 RLLQVAWDEPDLLQNVKRVSPWLVE 381
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 209/397 (52%), Gaps = 54/397 (13%)
Query: 42 GVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQ 101
G + L+ +LWHACAG +V +P + S V+YFPQGH+E N P +
Sbjct: 11 GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCV------DFGNLP-IPPM 63
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEV-FPISD------FGTKQSKHPSEFFC 154
+LC+V + AD E+DE++A++ L P+ ++ V D F + K PS F
Sbjct: 64 VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPS--FA 121
Query: 155 KTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPK 214
KTLT SD + GGFSVPR AE +FP+LDY +PP Q ++ +D+H + W FRHIYRG P+
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 215 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANR----------------QQ 258
RHLLTTGWS FV K+L AGDS++F+R E L VG+RRA R
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGG 241
Query: 259 TTLPSSVLSADSMHI------------------GVLXXXXXXXXNRSPFTIFYNPRACPS 300
+ SS+L D + V+ R PF + Y PRA S
Sbjct: 242 SCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGR-PFEVVYYPRASTS 300
Query: 301 EFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGK-RRYMGTIVGINDVDPLRWPGSKWR 359
EF + R A+ S GMRF M FETE+S + +MGT+ +N DP+RWP S WR
Sbjct: 301 EFCVKALDARAAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWR 359
Query: 360 NIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTS 396
+QV WDEP RV+ W +E ++ P LTS
Sbjct: 360 LLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP-LTS 395
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 256 bits (653), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 166/243 (68%), Gaps = 6/243 (2%)
Query: 153 FCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQ 212
F K LTASDTSTHGGFSV R+ A + P LD T PTQELV RDLH W F+HI+RGQ
Sbjct: 37 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQ 96
Query: 213 PKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMH 272
P+RHLLTTGWS FV SKRL AGD+ +F+R E LRVGVRR +QQ+T+P+SV+S+ SM
Sbjct: 97 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMR 156
Query: 273 IGVLXXXXXXXXNRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEE 332
+GVL + F +FY PR S+F+I + KY A+ + S+GMR+ M FE EE
Sbjct: 157 LGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEE 213
Query: 333 SGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE--TPESLFI 390
S +R + GTI+G D+ +WP SKWR++Q++WDEP + N+VS W+IE +P +L
Sbjct: 214 SPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTP 272
Query: 391 FPS 393
P+
Sbjct: 273 TPT 275
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 770 DGQSQITSASLAESHAFCLRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRTYTKVQKA 829
D S+ SA++ D++ S++ +SS QQ ST R+ KVQ
Sbjct: 354 DLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTST--RSRIKVQMQ 411
Query: 830 G-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPW 888
G +VGR++D+T ++Y+ELI+ +E MF ++G L + W +V+ D E D +LVGDDPW
Sbjct: 412 GTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL--SPKDKWAIVFTDDEGDRMLVGDDPW 469
Query: 889 EEFVGCVRCIRILSPSEVQQMSEEGM 914
EF + + I EV++M + +
Sbjct: 470 NEFCKMAKKLFIYPSDEVKKMRSKSL 495
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 246 bits (628), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 188/337 (55%), Gaps = 38/337 (11%)
Query: 50 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 109
+LW+ CAGPL LP+ G VYYFPQGH E + STR P + L S+L C+V +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLRCRVVAI 83
Query: 110 TLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP-SEFFCKTLTASDTSTHGGF 168
DK TDE+YAQ+SL P +E ++ T ++ P FF K LTASD S GG
Sbjct: 84 DRKVDKNTDEVYAQISLMPDTTEV----MTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 169 SVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT--GWSLFV 226
+P++ A + FP LD + TQ LV +DL+ W+F+H++RG P+RH+ T+ GWS+F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 227 GSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNR 286
+KRL GD + +R E +LR G+RRA QQ +PSSV+SA+ M GV+ +
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 259
Query: 287 SPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGIN 346
F + Y PR M FE ++ ++RY GTI+G+N
Sbjct: 260 CMFNVVYKPR-----------------------------MQFEGKDFSEKRYDGTIIGVN 290
Query: 347 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
D+ P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 291 DMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 188/337 (55%), Gaps = 38/337 (11%)
Query: 50 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPSLQSQLLCQVQNV 109
+LW+ CAGPL LP+ G VYYFPQGH E + STR P + L S+L C+V +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLRCRVVAI 83
Query: 110 TLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP-SEFFCKTLTASDTSTHGGF 168
DK TDE+YAQ+SL P +E ++ T ++ P FF K LTASD S GG
Sbjct: 84 DRKVDKNTDEVYAQISLMPDTTEV----MTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 169 SVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT--GWSLFV 226
+P++ A + FP LD + TQ LV +DL+ W+F+H++RG P+RH+ T+ GWS+F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 227 GSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLXXXXXXXXNR 286
+KRL GD + +R E +LR G+RRA QQ +PSSV+SA+ M GV+ +
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 259
Query: 287 SPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGIN 346
F + Y PR M FE ++ ++RY GTI+G+N
Sbjct: 260 CMFNVVYKPR-----------------------------MQFEGKDFSEKRYDGTIIGVN 290
Query: 347 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIE 383
D+ P W S+WR+++V+WDE + N+VS WDIE
Sbjct: 291 DMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 824 TKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLL 882
TKV G ++ R++D+T Y +LI+ +E +F L L + W++V+ + E +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTR--NQWEIVFTNNEGAEML 493
Query: 883 VGDDPWEEFVGCVRCIRILSPSEVQQM 909
VGDDPW EF + I I S E+++M
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 189/378 (50%), Gaps = 51/378 (13%)
Query: 44 RRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAA--STRRTATSQIPNYPSLQSQ 101
R ++ +W ACAG V +P + S VYYFPQGH E ST ++TS +P
Sbjct: 13 HREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPVP-------- 64
Query: 102 LLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDF-------GTKQSKHPSEFFC 154
C + ++ L AD TDE++A + LQP+ ++ F +++ G + F
Sbjct: 65 --CIITSIQLLADPVTDEVFAHLILQPMTQQQ--FTPTNYSRFGRFDGDVDDNNKVTTFA 120
Query: 155 KTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPK 214
K LT SD + GGFSVPR A+ +FP L++ I PP Q+L V D+H W FRHIYRG P+
Sbjct: 121 KILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPR 180
Query: 215 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVRRANRQQTTLP------------ 262
RHLLTTGWS FV SK+L AGDSV+F+R ++ +GVRR +
Sbjct: 181 RHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGY 240
Query: 263 ---SSVLSAD----------SMHIGVLXXXXXXXXNRS----PFTIFYNPRACPSEFVIP 305
SSV D S + + NR+ PF + + P A SEFV+
Sbjct: 241 YSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV- 299
Query: 306 LAKYRKAVYASQLSVGMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEW 365
A+ ++ + + G R M ETE+S + + IV + W GS W+ +Q+ W
Sbjct: 300 RAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITW 359
Query: 366 DEPGCGDKQNRVSVWDIE 383
DEP RV+ W +E
Sbjct: 360 DEPEILQNVKRVNPWQVE 377
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 163 bits (412), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 128/223 (57%), Gaps = 8/223 (3%)
Query: 30 NLVAEMKLLKDCGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTAT 89
N+ +E+ + D G + + +LW CAGPL +P++G VYYFPQGH E V ASTR
Sbjct: 8 NVQSELSGIID-GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELN 66
Query: 90 SQIPNYPSLQSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHP 149
PN L S+L C+V + L + +DE Y +++L P ++ + V P + Q +
Sbjct: 67 ELQPNC-DLPSKLQCRVIAIHLKVENNSDETYVEITLMP-DTTQVVIPTEN--ENQFRPI 122
Query: 150 SEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIY 209
F K LTASDTS G FSVP + A + P LD + P QEL+ DLH N W F+H Y
Sbjct: 123 VNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSY 182
Query: 210 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLRVGVR 252
R P+ TTGW+ F SK+L GD ++F R E +LRVG+R
Sbjct: 183 R-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 124 MSLQPVNSEKEVFPISDF-GTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQL 182
+SL E+E P+++ G ++ F K +T SD +P++ AE+ FP L
Sbjct: 5 LSLTRDEDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-L 63
Query: 183 DYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 241
D + L DL +W FR+ Y + +++T GWS FV K+L AGD V F R
Sbjct: 64 DSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 122
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYT----IQPPTQELVVRDLHDNT---WT 204
F KT+T SD +P++ AEK FP T + P + V+ +L D T W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 205 FRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 241
FR+ Y + ++LT GWS FV K LRAGD V F R
Sbjct: 254 FRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 129 VNSEKEVFPISDFGTKQSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQP 188
+N E + PI + + + F K +T SD +P++ AE+ FP + T
Sbjct: 1 MNQEDKEKPIEEASSSMER--EHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTND 58
Query: 189 PTQELVV--RDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD 242
+ L++ D N+W FR+ Y + +++T GWS FV K+L AGD V F RD
Sbjct: 59 SNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRD 114
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRG 211
F K +T SD +P+ AEK FP + L D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWN 246
Query: 212 QPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVG 250
+ ++LT GWS FV K LRAGD V F R + QL +G
Sbjct: 247 SSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 153 FCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNT---WTFRHIY 209
F K LT SD +P++ AE FP D Q V D D W FR+ Y
Sbjct: 36 FDKVLTPSDVGKLNRLVIPKQHAENFFPLED------NQNGTVLDFQDKNGKMWRFRYSY 89
Query: 210 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEI 244
+ +++T GWS FV K+L AGD+V F R I
Sbjct: 90 WNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYI 124
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 823 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF--------------GLDGL----LND 863
Y KV G+ R ID+ T+K+Y EL A+E MF G DGL L D
Sbjct: 187 YVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTD 246
Query: 864 T-KGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNS 919
+GS + + Y D +SD +LVGD PWE F+ + +RI+ SE ++ M+ S
Sbjct: 247 LLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRS 303
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 823 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF----GLDGLLNDTKGSGWKLVYVDYE 877
Y KV G+ R ID+ +KNY EL++A+E MF G KGSG+ Y D +
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKD 135
Query: 878 SDVLLVGDDPWEEFVGCVRCIRILSPSEV 906
D +LVGD PW+ F + +RI+ SE
Sbjct: 136 GDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIY 209
F K +T SD +P++ AEK FP L T+ +++ D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LPSPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 210 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 241
+ ++LT GWS FV K LRAGD V F R
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIY 209
F K +T SD +P++ AEK FP L T+ +++ D++ W FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LPSPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 210 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 241
+ ++LT GWS FV K LRAGD V F R
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 788 LRDNSGGTSSSHVDFDDSSLLQNNSWQQGSTPIRT-----YTKVQKAG-SVGRSIDVTTF 841
R N TSSS + + S Q N G + T + K+ G +GR +D+ +
Sbjct: 113 FRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAY 172
Query: 842 KNYEELIRAIECMF-GL--------DGL--------LNDTKGSGWKLVYVDYESDVLLVG 884
+YE+L ++ +F GL DG L D KG + L Y D E D +LVG
Sbjct: 173 NSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGE-FTLTYEDNEGDKMLVG 231
Query: 885 DDPWEEFVGCVRCIRILSPSEV 906
D PW+ FV V+ +R++ SE+
Sbjct: 232 DVPWQMFVSSVKRLRVIKSSEI 253
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKL------VYVD 875
Y K+ G +GR ++++ + NY++L A++ +F +K W L VY D
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF--------SKKDSWDLNRQYTLVYED 133
Query: 876 YESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
E D +LVGD PWE FV V+ + +L S +S
Sbjct: 134 TEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 823 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF----GLDGLLNDTKGSGWKLVYVDYE 877
Y KV G+ R ID+T +K Y EL++++E MF G KGS + Y D +
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKD 149
Query: 878 SDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGM 914
D +LVGD PWE FV + +RI+ SEV+ + G+
Sbjct: 150 GDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGGL 186
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQ--LDYTIQPPTQELVVRDLHDNTWTFRHIY 209
F KT+T SD +P+ AEK FP + + L D++ W FR+ Y
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 210 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 241
+ ++LT GWS FV KRL AGD + F R
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKR 273
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 151 EFFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYR 210
F K +T SD +P++ AE+ FP LD + L +D + W FR+ Y
Sbjct: 54 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYW 112
Query: 211 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 241
+ +++T GWS FV K+L AGD V F R
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 822 TYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF----GLDGLLNDTKGSGWKLVYVDY 876
+Y KV G+ R ID+ T+KNY EL++A+E MF G KGSG+ Y D
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Query: 877 ESDVLLVGDDPWEEFVGCVRCIRILSPSE 905
+ D +LVGD PW+ F + +RI+ S+
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMKGSD 166
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQL----------DYTIQPPTQELVVRDLHDN 201
F K+LT SD +P++ AEK FP D L D
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 202 TWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVGVRR 253
W FR+ Y + ++LT GWS +V K L AGD V F R ++ +L +G RR
Sbjct: 88 CWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 153 FCKTLTASDTSTHGGFSVPRRAAEKLFPQL----------DYTIQPPTQELVVRDLHDNT 202
F K+LT SD +P++ AEK FP D L D
Sbjct: 29 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKC 88
Query: 203 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVGVRR 253
W FR+ Y + ++LT GWS +V K L AGD V F R ++ +L +G RR
Sbjct: 89 WKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 809 QNNSWQQGSTPIRTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGL--------DG 859
+N S +G Y KV G+ R ID++ +K Y EL++A+E MF DG
Sbjct: 83 KNESEHEGQG---IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDG 139
Query: 860 LLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQM 909
KGS + Y D + D +L+GD PWE F+ + +RI+ SE + +
Sbjct: 140 Y----KGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 153 FCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIYR 210
F K LT SD +P++ AE+ FP + L++ D W FR+ Y
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 211 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EISQLRVGVRR 253
+ ++LT GWS +V K L AGD VLF R + + +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 811 NSWQQGSTPIRT--YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF---GLDGLLNDT 864
N + ST +R + KV G +GR ID+ K YE L +E MF L +T
Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLET 183
Query: 865 KG-------------SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSE 905
G SG L Y D E D +LVGD PW F+G VR +RI+ SE
Sbjct: 184 DGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVV--RDLHDNTWTFRHIY 209
F K LT SD +P++ AE+ FP + L++ D W FR+ Y
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 210 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEISQLR--VGVRR 253
+ ++LT GWS +V K L AGD VLF R R +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 811 NSWQQGSTPIRT--YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF---GLDGLLNDT 864
N + ST +R + KV G +GR ID+ K YE L +E MF L +T
Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLET 183
Query: 865 KG-------------SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEV 906
G SG L Y D E D +LVGD PW F+G VR +RI+ SE
Sbjct: 184 DGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 811 NSWQQGSTPIRT--YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF---GLDGLLNDT 864
N + ST +R + KV G +GR ID+ K YE L +E MF L +T
Sbjct: 124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLET 183
Query: 865 KG-------------SGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSE 905
G SG L Y D E D +LVGD PW F+G VR +RI+ SE
Sbjct: 184 DGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-GLDG-----------LLNDTKGSGW 869
+ KV G +GR +D+ +YE L + +E MF G+ G LL+ + S +
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGS--SDF 183
Query: 870 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
L Y D E D +LVGD PW F+ V+ +RI+ SE ++
Sbjct: 184 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQE---------LVVRDLHDNT 202
F K+LT SD +P++ AEK FP + + L D +
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 203 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLF--IRDEISQLRVGVRR 253
W FR+ Y + ++LT GWS FV K+L GD V F R + +L +G RR
Sbjct: 105 WRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-----GLDGLLND-TK-------GSG 868
+ KV G ++GR +D+ +YE L + +E MF G GL + TK S
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 869 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
+ L Y D E D +LVGD PW F+ V+ +R++ SE ++
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-----GLDGLLND-TK-------GSG 868
+ KV G ++GR +D+ +YE L + +E MF G GL + TK S
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 869 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
+ L Y D E D +LVGD PW F+ V+ +R++ SE ++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMF-----GLDGLLND-TK-------GSG 868
+ KV G ++GR +D+ +YE L + +E MF G GL + TK S
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 869 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 910
+ L Y D E D +LVGD PW F+ V+ +R++ SE ++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKG----SGWKLVYVDYE 877
Y KV G +GR ID+ + Y +LIR ++ MF L + + L Y D E
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKE 145
Query: 878 SDVLLVGDDPWEEFVGCVRCIRI 900
D ++VGD PWE F+ VR ++I
Sbjct: 146 GDWMMVGDVPWEMFLSTVRRLKI 168
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 152 FFCKTLTASDTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQE---------LVVRDLHDNT 202
F K+LT SD +P++ AEK FP + + L D +
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 203 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLF--IRDEISQLRVGVRR 253
W FR+ Y + ++LT GWS FV K+L GD V F R + +L +G RR
Sbjct: 105 WRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 823 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF-----------GLDGLLNDTK----- 865
Y KV G+ R ID+ +K Y++L A+ MF G+ +N++K
Sbjct: 120 YVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLL 179
Query: 866 -GSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMK 915
GS + Y D + D +LVGD PWE FV + IRI+ SE ++ ++
Sbjct: 180 NGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALE 230
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 822 TYTKVQKAGSVG-RSIDVTTFKNYEELIRAIECMFGLDGLLNDT-KGSGWKLVYVDYESD 879
+Y KV G+ R ID+ +K Y++L A++ +FG +DT K S +Y D + D
Sbjct: 75 SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGD 134
Query: 880 VLLVGDDPWEEFVGCVRCIRILSPS 904
+L GD PWE F+G + +RI+ S
Sbjct: 135 WMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVL 881
+ KV G +GR +D+ F YE L+ + MF + + L Y D + D +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 882 LVGDDPWEEFVGCVRCIRILSP 903
+VGD PW+ F+ VR ++I P
Sbjct: 134 MVGDIPWDMFLETVRRLKITRP 155
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 823 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKG----SGWKLVYVDYE 877
Y KV G +GR ID+ + Y +LI ++ MF L + + L Y D E
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKE 143
Query: 878 SDVLLVGDDPWEEFVGCVRCIRI 900
D ++VGD PWE F+ VR ++I
Sbjct: 144 GDWMMVGDVPWEMFLSSVRRLKI 166