Miyakogusa Predicted Gene

Lj0g3v0342489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342489.1 Non Chatacterized Hit- tr|I3T8C9|I3T8C9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.25,0,SUBFAMILY
NOT NAMED,NULL; CELL CYCLE CONTROL PROTEIN 50,Protein of unknown
function DUF284, transmem,CUFF.23492.1
         (343 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54320.1 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   523   e-149
AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 | chr3:...   509   e-144
AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:...   495   e-140
AT1G16360.1 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   476   e-134
AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:...   419   e-117
AT5G46150.1 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   397   e-111
AT5G46150.2 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   397   e-111

>AT1G54320.1 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr1:20275732-20277793
           REVERSE LENGTH=349
          Length = 349

 Score =  523 bits (1347), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 244/328 (74%), Positives = 275/328 (83%)

Query: 16  RRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHR 75
           R+ +KRPKYSKFTQQELPACKPILTP  VIS FLIV+++FIP+GV SL AS+DVVEI+ R
Sbjct: 22  RKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDR 81

Query: 76  YEADCVPGNWSSDKVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSR 135
           Y+ +C+P    ++KV YIQ   DK C R++ V KRMK PIYVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTECIPAPARTNKVAYIQGDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSR 141

Query: 136 NDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGIS 195
           +D QLR +   N  S CKPED V G PI+PCGLIAWS+FNDTY+ SRNN +L VNKKGI+
Sbjct: 142 SDSQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIA 201

Query: 196 WKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGKI 255
           WKSD+EHKFG+ VFPKNFQ G I GGA L+  IPLSEQEDLIVWMRTAALPTFRKLYGKI
Sbjct: 202 WKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKI 261

Query: 256 EMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSM 315
           E DLE GD I V L NNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGG+ F L++
Sbjct: 262 ESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILAL 321

Query: 316 VFTIVYFVKPRQLGDPSYLSWNRNPGGH 343
            FTI+Y VKPR+LGDPSYLSWNRNPGG 
Sbjct: 322 AFTIMYLVKPRRLGDPSYLSWNRNPGGR 349


>AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 |
           chr3:4049739-4051561 FORWARD LENGTH=350
          Length = 350

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 237/328 (72%), Positives = 275/328 (83%)

Query: 16  RRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHR 75
           RR +KRPKYSKFTQQELPACKPILTP  VIS FLI++++FIP+GV SL AS+DVVEI+ R
Sbjct: 23  RRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDR 82

Query: 76  YEADCVPGNWSSDKVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSR 135
           Y++ C+P +  ++KV YIQ + +K+CTR + V KRMK PIYVYYQL+NFYQNHRRYVKSR
Sbjct: 83  YDSACIPLSDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSR 142

Query: 136 NDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGIS 195
           +D QLR     N    CKPED   G PI+PCGLIAWS+FNDTY  SRNN  LTVNKKGI+
Sbjct: 143 SDSQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIA 202

Query: 196 WKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGKI 255
           WKSD+EHKFG +VFPKNFQ G + GGA L+   PLS+QEDLIVWMRTAALPTFRKLYGKI
Sbjct: 203 WKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKI 262

Query: 256 EMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSM 315
           E DLEKG+ I+V LQNNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+ F L++
Sbjct: 263 ESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLAL 322

Query: 316 VFTIVYFVKPRQLGDPSYLSWNRNPGGH 343
            FT++Y VKPR+LGDP+YLSWNR PGG 
Sbjct: 323 AFTVMYLVKPRRLGDPTYLSWNRIPGGR 350


>AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 |
           chr1:29887831-29889904 FORWARD LENGTH=350
          Length = 350

 Score =  495 bits (1275), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 230/327 (70%), Positives = 264/327 (80%)

Query: 16  RRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHR 75
           ++ +KRPKYS+FTQQELPACKPILTPR VI  FL+  +VFIP+GV  L AS+ VVEI+ R
Sbjct: 22  KKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDR 81

Query: 76  YEADCVPGNWSSDKVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSR 135
           Y+ DC+P +  ++ V YIQ   DK C R I V K MK P+YVYYQL+NFYQNHRRYVKSR
Sbjct: 82  YDTDCIPTSSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSR 141

Query: 136 NDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGIS 195
           ND QLR   + +    C PED V G PI+PCGL+AWS+FNDTYSFSRN+  L VNKKGIS
Sbjct: 142 NDAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGIS 201

Query: 196 WKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGKI 255
           WKSDRE+KFG +VFPKNFQ G  IGG  LN + PLSEQEDLIVWMRTAALPTFRKLYGKI
Sbjct: 202 WKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKI 261

Query: 256 EMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSM 315
           E DL  GD I V+LQNNYNTYSFNG+KKLVLSTTSWLGG+NDFLGIAYLTVG +  FL++
Sbjct: 262 ETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAV 321

Query: 316 VFTIVYFVKPRQLGDPSYLSWNRNPGG 342
            F ++Y VKPRQLGDPSYLSWNR+ GG
Sbjct: 322 TFAVLYLVKPRQLGDPSYLSWNRSAGG 348


>AT1G16360.1 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr1:5593493-5595179
           REVERSE LENGTH=336
          Length = 336

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 219/318 (68%), Positives = 258/318 (81%)

Query: 25  SKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHRYEADCVPGN 84
           S+FTQQELPACKPILTP+ VI  FL+  +VFIP+GV  L AS+ V+EI+ RY+ DC+P +
Sbjct: 17  SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query: 85  WSSDKVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDSS 144
              +KV YIQ   DK C R I V K MK+P+YVYYQL+N+YQNHRRYVKSR D QLR   
Sbjct: 77  SRDNKVRYIQGLEDKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query: 145 KANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGISWKSDREHKF 204
             + +  C PED + G PI+PCGL+AWS+FNDTY F+RNN  L VNKK ISWKSDRE KF
Sbjct: 137 DEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKF 196

Query: 205 GDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGKIEMDLEKGDV 264
           G +VFPKNFQ G++IGG  L++ IPLSEQEDLIVWMRTAALPTFRKLYGKI+ DL+ GD 
Sbjct: 197 GKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDT 256

Query: 265 IKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSMVFTIVYFVK 324
           IKV+LQNNYNTYSFNGKKKLVLSTTSWLGG+NDFLGIAYLTVG +  FL++ F+++Y  K
Sbjct: 257 IKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAK 316

Query: 325 PRQLGDPSYLSWNRNPGG 342
           PRQLGDPSYLSWNR+ GG
Sbjct: 317 PRQLGDPSYLSWNRSAGG 334


>AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 |
           chr1:29888665-29889904 FORWARD LENGTH=283
          Length = 283

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 195/274 (71%), Positives = 221/274 (80%)

Query: 69  VVEIIHRYEADCVPGNWSSDKVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNFYQNH 128
           VVEI+ RY+ DC+P +  ++ V YIQ   DK C R I V K MK P+YVYYQL+NFYQNH
Sbjct: 8   VVEIVDRYDTDCIPTSSRNNMVAYIQGEGDKICKRTITVTKAMKHPVYVYYQLENFYQNH 67

Query: 129 RRYVKSRNDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTYSFSRNNNNLT 188
           RRYVKSRND QLR   + +    C PED V G PI+PCGL+AWS+FNDTYSFSRN+  L 
Sbjct: 68  RRYVKSRNDAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLL 127

Query: 189 VNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTF 248
           VNKKGISWKSDRE+KFG +VFPKNFQ G  IGG  LN + PLSEQEDLIVWMRTAALPTF
Sbjct: 128 VNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTF 187

Query: 249 RKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGG 308
           RKLYGKIE DL  GD I V+LQNNYNTYSFNG+KKLVLSTTSWLGG+NDFLGIAYLTVG 
Sbjct: 188 RKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGS 247

Query: 309 LSFFLSMVFTIVYFVKPRQLGDPSYLSWNRNPGG 342
           +  FL++ F ++Y VKPRQLGDPSYLSWNR+ GG
Sbjct: 248 ICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 281


>AT5G46150.1 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr5:18708735-18710424
           REVERSE LENGTH=343
          Length = 343

 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/340 (56%), Positives = 258/340 (75%), Gaps = 5/340 (1%)

Query: 1   MATPSAGSNDPTAATRRQTKRPK-YSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIG 59
           M    + +  P  ++  +++R K   +F QQ+LPACKP+LTP +VI+ F+++  VFIPIG
Sbjct: 2   MEVEGSMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIG 61

Query: 60  VASLIASRDVVEIIHRYEADCVPGNWSSDKVGYI-QSSADKTCTREIHVEKRMKSPIYVY 118
           + +L ASRD +EII RY+ +C+P  + ++K+ YI  SS  K CTR + V+K MK+PI++Y
Sbjct: 62  LITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIY 121

Query: 119 YQLDNFYQNHRRYVKSRNDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTY 178
           YQLDN+YQNHRRYVKSR+D+QL    + + +S C+PE+  NG+PI+PCGLIAWSMFNDT+
Sbjct: 122 YQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTF 181

Query: 179 SFSRNNNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIV 238
           +FSR    L V++  I+WKSDREHKFG +V+P NFQNGT+IGGA L+  IPLS+QED IV
Sbjct: 182 TFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIV 241

Query: 239 WMRTAALPTFRKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDF 298
           WMR AAL +FRKLYG+IE DLE G V++V L NNYNTYSF+G+KKL+LST++WLGG+NDF
Sbjct: 242 WMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDF 301

Query: 299 LGIAYLTVGGLSFFLSMVFTIVYFVKPRQLGDPSYLSWNR 338
           LGI YL VG  S  +S++F +++   PR  GD    SWN+
Sbjct: 302 LGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338


>AT5G46150.2 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr5:18708735-18710424
           REVERSE LENGTH=343
          Length = 343

 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/340 (56%), Positives = 258/340 (75%), Gaps = 5/340 (1%)

Query: 1   MATPSAGSNDPTAATRRQTKRPK-YSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIG 59
           M    + +  P  ++  +++R K   +F QQ+LPACKP+LTP +VI+ F+++  VFIPIG
Sbjct: 2   MEVEGSMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIG 61

Query: 60  VASLIASRDVVEIIHRYEADCVPGNWSSDKVGYI-QSSADKTCTREIHVEKRMKSPIYVY 118
           + +L ASRD +EII RY+ +C+P  + ++K+ YI  SS  K CTR + V+K MK+PI++Y
Sbjct: 62  LITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIY 121

Query: 119 YQLDNFYQNHRRYVKSRNDEQLRDSSKANSSSGCKPEDYVNGVPILPCGLIAWSMFNDTY 178
           YQLDN+YQNHRRYVKSR+D+QL    + + +S C+PE+  NG+PI+PCGLIAWSMFNDT+
Sbjct: 122 YQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTF 181

Query: 179 SFSRNNNNLTVNKKGISWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIV 238
           +FSR    L V++  I+WKSDREHKFG +V+P NFQNGT+IGGA L+  IPLS+QED IV
Sbjct: 182 TFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIV 241

Query: 239 WMRTAALPTFRKLYGKIEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDF 298
           WMR AAL +FRKLYG+IE DLE G V++V L NNYNTYSF+G+KKL+LST++WLGG+NDF
Sbjct: 242 WMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDF 301

Query: 299 LGIAYLTVGGLSFFLSMVFTIVYFVKPRQLGDPSYLSWNR 338
           LGI YL VG  S  +S++F +++   PR  GD    SWN+
Sbjct: 302 LGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338