Miyakogusa Predicted Gene

Lj0g3v0342159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342159.1 Non Chatacterized Hit- tr|I1LX42|I1LX42_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53128
PE,59.65,6e-19,seg,NULL,CUFF.23447.1
         (131 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16160.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...    81   2e-16

>AT5G16160.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:5275813-5276576 REVERSE LENGTH=133
          Length = 133

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 35/145 (24%)

Query: 1   MEKEEEDSRREAAMASSLCLQPNFNPKGVTKDQLSKFRELHRKRLQLXXXXXXXXXXXXX 60
           +++E E++R+EA +AS+L LQPNFN   +T+ Q+SK +ELH++R+Q+             
Sbjct: 10  IDREAEENRKEALLASTLSLQPNFNRSNLTQKQISKLQELHKRRMQIKANAK-------- 61

Query: 61  DVTNKKFQGYDLSSQSSEAQGLKIDDKDGECS--------------DSQNTDSKGGGVLV 106
            +  KK +     S++S+++ +    +DGE S              + QN +     V V
Sbjct: 62  -IHKKKPKA----SKNSQSKAI----EDGESSKKLKEPTSSSSSTLEEQNHNK--TVVTV 110

Query: 107 PSSSKKQKLHWGLDTKERWERKSNM 131
           P   K QKL WGLDT+ERWERK+NM
Sbjct: 111 P--KKPQKLFWGLDTRERWERKANM 133