Miyakogusa Predicted Gene

Lj0g3v0342059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342059.1 tr|G7J5Q3|G7J5Q3_MEDTR Thylakoidal processing
peptidase OS=Medicago truncatula GN=MTR_3g100960 PE=3
,85.11,0.00000000000006,
,gene.Ljchr0_pseudomol_20120828.path1.gene35454.1
         (47 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06870.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...    47   2e-06

>AT1G06870.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
          protein | chr1:2108832-2110642 FORWARD LENGTH=367
          Length = 367

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 1  MANRATFSFSRYVAQNLVSSAGVRV--ANSRCVQECWILSRFFGTNQKP 47
          MA R TF++S YVA+++ SSAG RV   + R   E W+  RF G NQ P
Sbjct: 1  MAIRVTFTYSSYVARSIASSAGTRVGTGDVRSCFETWVRPRFCGHNQIP 49