Miyakogusa Predicted Gene

Lj0g3v0341989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341989.1 Non Chatacterized Hit- tr|F0ZYG2|F0ZYG2_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,30.86,3e-19,Mpv17_PMP22,Mpv17/PMP22; PEROXISOMAL MEMBRANE PROTEIN
2, PXMP2 (MPV17),Mpv17/PMP22,CUFF.23437.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14305.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...   281   2e-76
AT4G14305.2 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...   241   1e-64
AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa (Mpv1...   218   1e-57
AT5G43140.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    67   6e-12
AT3G24570.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    61   4e-10
AT5G19750.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    58   3e-09
AT4G33905.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    51   5e-07
AT2G14860.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    50   7e-07

>AT4G14305.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr4:8235335-8236605 REVERSE LENGTH=185
          Length = 185

 Score =  281 bits (718), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 129/185 (69%), Positives = 150/185 (81%)

Query: 1   MSDIVNDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYG 60
           MSD+  DA +KYL QLQ HPLRTKA TA  LAG SDA+AQK++G K+           YG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW 120
           FAY GPFGHF HKLMD IFKGK GN TVAKKV+LEQ+TSSPWNNFLFM YYGLV+EGRPW
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 SMVINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRARTV 180
            +V +K+ KDYP++QLTAWKFWP+VGWVNYQY+P+QFRV+F SFVA+CW IFLNL+AR+ 
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSP 180

Query: 181 AIKKA 185
            IK A
Sbjct: 181 VIKNA 185


>AT4G14305.2 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr4:8235335-8236582 REVERSE LENGTH=173
          Length = 173

 Score =  241 bits (616), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 109/155 (70%), Positives = 128/155 (82%)

Query: 31  LAGFSDAVAQKMAGAKKXXXXXXXXXXXYGFAYSGPFGHFLHKLMDKIFKGKTGNETVAK 90
           LAG SDA+AQK++G K+           YGFAY GPFGHF HKLMD IFKGK GN TVAK
Sbjct: 19  LAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTVAK 78

Query: 91  KVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKKDYPSVQLTAWKFWPVVGWVNY 150
           KV+LEQ+TSSPWNNFLFM YYGLV+EGRPW +V +K+ KDYP++QLTAWKFWP+VGWVNY
Sbjct: 79  KVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWVNY 138

Query: 151 QYMPMQFRVIFHSFVAACWGIFLNLRARTVAIKKA 185
           QY+P+QFRV+F SFVA+CW IFLNL+AR+  IK A
Sbjct: 139 QYVPLQFRVLFSSFVASCWSIFLNLKARSPVIKNA 173


>AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa
           (Mpv17/PMP22) family protein | chr4:2227963-2229226
           REVERSE LENGTH=190
          Length = 190

 Score =  218 bits (556), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/182 (56%), Positives = 130/182 (71%), Gaps = 2/182 (1%)

Query: 6   NDALKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXYGFAYSG 65
              L++YL QLQ HPLRTKA TA  L+G SD V+QK++G +K           +   + G
Sbjct: 8   KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query: 66  PFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVIN 125
           P GHF H  +DK FKGK   +TVAKKVILEQ+T SP N+ LFM+YYG+VIE  PW++V  
Sbjct: 68  PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRE 127

Query: 126 KVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRAR--TVAIK 183
           ++KK YP+VQLTAW F+PVVGW+NY+Y+P+ FRVI HS VA  WGIFL LRAR  T+A+ 
Sbjct: 128 RIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLALA 187

Query: 184 KA 185
           KA
Sbjct: 188 KA 189


>AT5G43140.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr5:17321570-17323224 FORWARD
           LENGTH=254
          Length = 254

 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 4/171 (2%)

Query: 9   LKKYLRQLQLHPLRTKAFTAAFLAGFSDAVAQ--KMAGAKKXXXXXXXXXXXYGFAYSGP 66
           L+ YLR+L+ HP  TK+ T + +   +D  +Q   M                +G  + GP
Sbjct: 79  LRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGP 138

Query: 67  FGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINK 126
             H     + KI   K    T  KK+++ Q+   P +N +F  Y    ++G     ++ +
Sbjct: 139 SQHLWFSYLSKILP-KRDVLTTFKKIMMGQVLFGPVSNTVFYSYNA-ALQGENSEEIVAR 196

Query: 127 VKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRA 177
           +K+D          +WPV  +V ++Y+P+  + + +S  A  W I+L   A
Sbjct: 197 LKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMA 247


>AT3G24570.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr3:8966675-8968530 REVERSE LENGTH=235
          Length = 235

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 39/187 (20%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQ------------------------------- 40
           Y R L +HP++T+  ++ FL GF D  AQ                               
Sbjct: 8   YQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKW 67

Query: 41  KMAGAKKXXXXXXXXXXXYGFAYSGPFGHFLHKLMDKIFKGK-----TGNETVAKKVILE 95
           K     K           +GF + GP GHF ++ +DK  K K          VA KV ++
Sbjct: 68  KQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMD 127

Query: 96  QITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKKDY-PSVQLTAWKFWPVVGWVNYQYMP 154
            +   P +  +F  Y G    G+  + V   +K+D+ P++ L     WP++   N++Y+P
Sbjct: 128 GLIFGPVDLLVFFTYMGFAT-GKNTAEVKEGLKRDFLPALALEG-GAWPLLQIANFRYVP 185

Query: 155 MQFRVIF 161
           +Q+++++
Sbjct: 186 VQYQLLY 192


>AT5G19750.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr5:6677124-6679127 FORWARD LENGTH=288
          Length = 288

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 4/174 (2%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMAGAKKXXXXXXXXXXXY-GFAYSGPFGHF 70
           Y   L   P+ TKA TAA L    D + Q                  + G    GP  HF
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHF 177

Query: 71  LHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKKD 130
            +  + K+    +G      +++L+Q   +P    +F+    + +EG+P S VI K++++
Sbjct: 178 WYLYLSKVVTA-SGLSGAVIRLLLDQFVFAPIFVGVFLSAV-VTLEGKP-SNVIPKLQQE 234

Query: 131 YPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRARTVAIKK 184
           +    +  W+ W    ++N++++P  ++V+  + VA  W + L+ +A    + K
Sbjct: 235 WTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHKEVVAK 288


>AT4G33905.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr4:16254065-16255592 REVERSE
           LENGTH=261
          Length = 261

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 7/177 (3%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQKM--AGAKKXXXXXXXXXXXYGFAYSGPFGH 69
           YL  ++  P+ TK+ T++ +   +D  +Q +  A               YG    GP  H
Sbjct: 86  YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145

Query: 70  FLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKK 129
           +   LM  +F  K    T  KK+ + Q    P  N +F       ++G   S ++ ++K+
Sbjct: 146 YWFNLMSSLFP-KRDLITTFKKMAMGQTVYGPAMNVVFFSLNA-ALQGENGSEIVARLKR 203

Query: 130 DYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNL---RARTVAIK 183
           D     L    +WP+  ++ +++ P+  + +  +  +  W I++     RA   AI+
Sbjct: 204 DLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMASRATPTAIE 260


>AT2G14860.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr2:6387820-6389563 REVERSE LENGTH=252
          Length = 252

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 7/177 (3%)

Query: 12  YLRQLQLHPLRTKAFTAAFLAGFSDAVAQKMA--GAKKXXXXXXXXXXXYGFAYSGPFGH 69
           YL  ++ HP+ TK+ T++ +   +D  +Q +A   ++            YG    GP  H
Sbjct: 77  YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136

Query: 70  FLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSMVINKVKK 129
           +    M ++F  K    T  KK+ + Q    P    +F       ++G   S+++ ++K+
Sbjct: 137 YWFNFMSRLFP-KQDLITTFKKMAMGQTIYGPIMTVIFFSL-NASLQGERGSVILARLKR 194

Query: 130 DYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNL---RARTVAIK 183
           D          +WP+  ++ +++ P+  + +  +  +  W I++     R + VAI 
Sbjct: 195 DLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVAIS 251