Miyakogusa Predicted Gene

Lj0g3v0341829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341829.1 tr|G5B5W3|G5B5W3_HETGA Alanyl-tRNA synthetase,
cytoplasmic OS=Heterocephalus glaber GN=GW7_15460
PE=,41.46,3e-19,tRNA-synt_2c,Alanyl-tRNA synthetase, class IIc,
N-terminal; SUBFAMILY NOT NAMED,Alanine-tRNA ligase,,CUFF.23424.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase | chr...   209   6e-55
AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase | chr1:185...   209   7e-55
AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA synt...    47   4e-06

>AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase |
           chr1:18591429-18598311 REVERSE LENGTH=1003
          Length = 1003

 Score =  209 bits (531), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 123/151 (81%), Gaps = 4/151 (2%)

Query: 1   MAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKKGILPTDDSFK 60
           MAEE+GLLVDV+GFN AME ARERSR+AQ KQAGGAIVMDADATS LHK G+  TDDSFK
Sbjct: 480 MAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFK 539

Query: 61  YVWFKDHQSGVKAIYTGSEFVDSVNTDGDIGVILESTSFYAEQGGQIFDTGSLECQHASF 120
           Y+WF+DH+S +KAIYTGS F++S     ++G++L STSFYAEQGGQIFDTG +E    +F
Sbjct: 540 YIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEGSFGTF 599

Query: 121 QVRNVQVFGGFVLHIG---NGTG-ISVGDKV 147
            V NVQ+FGGFVLHIG     TG +SVGDKV
Sbjct: 600 NVCNVQIFGGFVLHIGYLSKETGEVSVGDKV 630


>AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase |
           chr1:18591429-18598167 REVERSE LENGTH=963
          Length = 963

 Score =  209 bits (531), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 123/151 (81%), Gaps = 4/151 (2%)

Query: 1   MAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKKGILPTDDSFK 60
           MAEE+GLLVDV+GFN AME ARERSR+AQ KQAGGAIVMDADATS LHK G+  TDDSFK
Sbjct: 432 MAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFK 491

Query: 61  YVWFKDHQSGVKAIYTGSEFVDSVNTDGDIGVILESTSFYAEQGGQIFDTGSLECQHASF 120
           Y+WF+DH+S +KAIYTGS F++S     ++G++L STSFYAEQGGQIFDTG +E    +F
Sbjct: 492 YIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEGSFGTF 551

Query: 121 QVRNVQVFGGFVLHIG---NGTG-ISVGDKV 147
            V NVQ+FGGFVLHIG     TG +SVGDKV
Sbjct: 552 NVCNVQIFGGFVLHIGYLSKETGEVSVGDKV 582


>AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA
           synthetase, class IIc | chr5:7616221-7619961 REVERSE
           LENGTH=978
          Length = 978

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 14/142 (9%)

Query: 1   MAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKKGILPTDDSFK 60
           +AEE+G+ +D+ GF   ME  R +S+ A        +  DAD T  +     L  D    
Sbjct: 493 VAEERGVSIDMNGFEVEMENQRRQSQAAHN-VVKLTVEDDADMTKNIADTEFLGYDSL-- 549

Query: 61  YVWFKDHQSGVKAIYTGSEFVDSVNTDGDIGVILESTSFYAEQGGQIFDTGSLEC----- 115
                  ++ VK++    + V  V+   ++ V+L+ T FYAE GGQI D G L       
Sbjct: 550 -----SARAVVKSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVSSDGN 604

Query: 116 -QHASFQVRNVQVFGGFVLHIG 136
            + A  +V +VQ      +H G
Sbjct: 605 QEKAVVEVSDVQKSLKIFVHKG 626