Miyakogusa Predicted Gene

Lj0g3v0341669.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341669.2 tr|A9U2K0|A9U2K0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173326,42.64,1e-18,no description,NULL; seg,NULL;
S-adenosyl-L-methionine-dependent methyltransferases,NULL,CUFF.23410.2
         (352 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44600.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   296   1e-80
AT5G44590.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   278   4e-75
AT5G63100.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   125   4e-29

>AT5G44600.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:17989867-17991519 FORWARD LENGTH=333
          Length = 333

 Score =  296 bits (759), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 147/262 (56%), Positives = 180/262 (68%), Gaps = 5/262 (1%)

Query: 87  VLTSLRSDYNDIMIVDTPKSRMLLLDSSHNVHSILYKD-KKWTDSYWDEFASLPAIVPKG 145
           V+T++RS YN+I+IVDT  SR LLLDS+ NVHS++ K  + WT SYWDEFASLP I+P G
Sbjct: 76  VVTAVRSRYNEIVIVDTASSRYLLLDSTKNVHSVINKGGQNWTGSYWDEFASLPPIIPNG 135

Query: 146 PIAIXXXXXXTAAHLMLDLWPSLHLEGWEIDDILIDKARDYFGLSDLEKTTEDGGILNVH 205
           P+AI      TAA LML+LWP++ LEGWEID+ILI+KARDY GLS+LEK T  GG L VH
Sbjct: 136 PVAIYGLGGGTAARLMLELWPTMQLEGWEIDEILIEKARDYLGLSELEKPTSKGGRLCVH 195

Query: 206 IGDVFIPSEDLHRRYAGIVVDLFSDGKVLPQLEEVSAWLELNERLMANGRFMVNCXXXXX 265
           + D   PS+D+  RYAGI+VDLF+DGKVL QL+EV  WLEL  RLM NGR MVNC     
Sbjct: 196 VDDALSPSQDVSGRYAGIIVDLFADGKVLDQLQEVPIWLELASRLMPNGRIMVNCAGIET 255

Query: 266 XXXXXXXFTDPQISSSDETWLLNPAMKALSKVFPGQLSWKRMSKETGANFMALTGPLPDL 325
                     PQ+   D   +LN  +K LS+ FPGQ+ WKR     G NF+ALTG LPDL
Sbjct: 256 ELQN----GKPQLLLDDSAGMLNSTVKILSEAFPGQVCWKRTPDSEGLNFLALTGGLPDL 311

Query: 326 NSWSASVPSPLSTSIKDWRPCE 347
           + WS+ VP      +K W+ CE
Sbjct: 312 SDWSSKVPVRFCEVVKQWKLCE 333


>AT5G44590.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:17987591-17989227 FORWARD LENGTH=349
          Length = 349

 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 145/282 (51%), Positives = 181/282 (64%), Gaps = 23/282 (8%)

Query: 87  VLTSLRSDYNDIMIVDTPKSRMLLLDSSHNVHSILYKD-KKWTDSYW------------- 132
           V+T+++S YN+I+IVDT  SR LLLDS+ NVHS++ K  + WT +YW             
Sbjct: 62  VVTAVKSRYNEIVIVDTFASRYLLLDSTRNVHSVINKGGQNWTGAYWVNVVIVFNFESYQ 121

Query: 133 -----DEFASLPAIVPKGPIAIXXXXXXTAAHLMLDLWPSLHLEGWEIDDILIDKARDYF 187
                DE A LP I+P GPIAI      TAA L+L+LWPS  LEGWEID+ILI+KARDY 
Sbjct: 122 HFCLKDESACLPPIIPNGPIAIYGLGGGTAARLILELWPSTELEGWEIDEILIEKARDYL 181

Query: 188 GLSDLEKTTEDGGILNVHIGDVFIPSEDLHRRYAGIVVDLFSDGKVLPQLEEVSAWLELN 247
           GLS+LE  T  GG L +H+ D   P +D  +RYAGI+VDLF+DGKVL QL+E+  WLEL 
Sbjct: 182 GLSELEIPTSKGGRLCIHVDDALSPCQDDSKRYAGIIVDLFADGKVLDQLQEIPMWLELA 241

Query: 248 ERLMANGRFMVNCXXXXXXXXXXXXFTDPQISSSDETWLLNPAMKALSKVFPGQLSWKRM 307
            RLM NGR MVNC               P++   D  W+LN  +K LS+ FPGQ+SWKR 
Sbjct: 242 SRLMPNGRLMVNCAGIETEVKN----GKPELVLDDLAWMLNSTVKILSEAFPGQVSWKRT 297

Query: 308 SKETGANFMALTGPLPDLNSWSASVPSPLSTSIKDWRPCELV 349
               G NF+ALTG LPDL+ WS+ VP  LS S+K W+ CE V
Sbjct: 298 PDSEGLNFVALTGGLPDLSDWSSKVPVRLSESVKLWKLCETV 339


>AT5G63100.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:25314434-25315423 REVERSE LENGTH=329
          Length = 329

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 146/268 (54%), Gaps = 24/268 (8%)

Query: 88  LTSLRSDYNDIMIVDTPK--------SRMLLLDSSHNVHSILYKDKKWTDSYWDEFASLP 139
           +   +S +N I +++  +        SR+LLLD+  N+HSI +  K  TDSY+D FA+LP
Sbjct: 68  IAKFKSRHNYIRVIEVSRKTNHPLAGSRLLLLDNPGNIHSISFLLKTLTDSYFDVFATLP 127

Query: 140 AIVPKGPIAIXXXXXXTAAHLMLDLW-PSLHLEGWEIDDILIDKARDYFGLSDLEKTTED 198
            I+P GPI I      + A L+L+L+ P + + GWE+D  +ID  R++FGLS LE+  +D
Sbjct: 128 PIIPPGPIGILGFGAGSTARLILELYPPEIAVHGWELDPSVIDVGREFFGLSKLERDHKD 187

Query: 199 GGILNVHIGDVFIPSEDLHRRYAGIVVDLFSDGKVLPQLEEVSAWLELNERLMANGRFMV 258
              +N  IGD    S  +   ++GI+VDLFS G V+ +L++   W +L  RL   GR MV
Sbjct: 188 RIFIN--IGDALNAS--VKTGFSGILVDLFSKGSVIKELQDPQVWEDLKSRLRYRGRIMV 243

Query: 259 NCXXXXXXXXXXXXFTDPQISSSDETWLLNPAMKALSKVFPGQLSWKRMSKETGANFMAL 318
           N               + + S  D   ++   ++ +S+VF  +L    +     ++ +AL
Sbjct: 244 NVGGKC---------VEAEDSDRDGALVMEETLRVMSQVFGDKLFVLTLGNGNDSS-VAL 293

Query: 319 TGPLPDLNSWSASVP-SPLSTSIKDWRP 345
           TG LPDL++W   +P S L + +  W P
Sbjct: 294 TGDLPDLDAWKKRLPRSELRSYVDMWIP 321