Miyakogusa Predicted Gene

Lj0g3v0341369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341369.1 CUFF.23379.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31660.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Bystin (In...   182   5e-47

>AT1G31660.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Bystin
           (InterPro:IPR007955); Has 475 Blast hits to 467 proteins
           in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155;
           Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes
           - 117 (source: NCBI BLink). | chr1:11331176-11333440
           REVERSE LENGTH=444
          Length = 444

 Score =  182 bits (462), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 87/132 (65%), Positives = 108/132 (81%), Gaps = 5/132 (3%)

Query: 1   MEYCGTTSYFIKLLLEKKYALPYRVVDAVVAHFMKFLNETRIMPVIWHQSLLTFAQRYKN 60
           M+YCGTTSYFIK+LLEKKY +PYRV+DA+VAHFM+F+++ R+MPVIWHQSLLTF QRYK 
Sbjct: 318 MDYCGTTSYFIKVLLEKKYCMPYRVLDALVAHFMRFVDDIRVMPVIWHQSLLTFVQRYKY 377

Query: 61  ELQKEQKDNLKFLLEKQKHKLVTPEISKELNHSRNRGEKEDDLMSISVPVSMLIKPIEEK 120
           E+ KE K++L+ LL++QKH LVTPEI +EL  SRNRGEKED ++    PV     P +E 
Sbjct: 378 EILKEDKEHLQTLLQRQKHHLVTPEILRELKDSRNRGEKEDPMVDNFAPV-----PAKED 432

Query: 121 RDEIPEVPMEED 132
           R +IPEVPMEED
Sbjct: 433 RFDIPEVPMEED 444