Miyakogusa Predicted Gene
- Lj0g3v0340609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0340609.1 tr|G7KPD3|G7KPD3_MEDTR Peroxisomal fatty acid
beta-oxidation multifunctional protein OS=Medicago tru,88.29,0,no
description,NULL; no description,NAD(P)-binding domain;
3-HYDROXYACYL-COA DEHYROGENASE,NULL; ECH,,CUFF.23325.1
(411 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29010.1 | Symbols: AIM1 | Enoyl-CoA hydratase/isomerase fami... 585 e-167
AT3G06860.1 | Symbols: MFP2, ATMFP2 | multifunctional protein 2 ... 447 e-126
AT4G16210.1 | Symbols: ECHIA, E-COAH-2 | enoyl-CoA hydratase/iso... 71 1e-12
AT4G16800.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 67 3e-11
AT1G60550.1 | Symbols: ECHID, DHNS | enoyl-CoA hydratase/isomera... 58 1e-08
AT3G15290.1 | Symbols: | 3-hydroxyacyl-CoA dehydrogenase family... 56 5e-08
AT5G43280.1 | Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dien... 55 1e-07
AT5G43280.2 | Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dien... 55 1e-07
>AT4G29010.1 | Symbols: AIM1 | Enoyl-CoA hydratase/isomerase family
| chr4:14297312-14302016 REVERSE LENGTH=721
Length = 721
Score = 585 bits (1509), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/408 (69%), Positives = 340/408 (83%)
Query: 4 VKVDFEVGNDGVAVITMCNPPVNALAVPIIKALKDRFDEAARRNDVKAIVLTGKGGRFSG 63
+ V EVGNDGVAVIT+ NPPVN+LA PII LK++F +A +RNDVKAIVL G GRFSG
Sbjct: 5 IGVTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSG 64
Query: 64 GFDISVMQKVHQTGDVTLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGCHAR 123
GFDI+V Q+VH+TGD++L+P+VSVELV N +EDS+KP M CHAR
Sbjct: 65 GFDINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHAR 124
Query: 124 VAAPRTQLGLPELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLIDAI 183
VAAP+ QLGLPELTLG+IPGFGGTQRLPRLVGL+KA +M+L SKSI+SEEG+KLGLIDA+
Sbjct: 125 VAAPKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDAL 184
Query: 184 VSPGDLLNVSRRWALEIGERRKPWIRSLHKTDKLGSLSEAREVLKTAREHVKKTAAHLPQ 243
V PGD+L+ SR+WAL+I E RKP+++SLH+TDK+GSLSEAR +LK +R+ KK A ++PQ
Sbjct: 185 VPPGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQ 244
Query: 244 QQACVDVIEHGIVHGGYSGVLREAEVFKQLVLSETAKGLIHVFFAQRAISKVPGVTDIGL 303
AC++VIE GI+HGGYSGVL+EAEVFKQLVLS+TAKGL+HVFFAQRA SKVP VTD+GL
Sbjct: 245 HHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGL 304
Query: 304 KPRNVRKAAVIGGGLMGSGIATALILGNIHVILKEVNSEYLQKGIKFIEANVSGLVRRGK 363
KPR ++K AVIGGGLMGSGIATAL+L NI V+LKE+NSE+L KGIK +EAN+ LV RGK
Sbjct: 305 KPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGK 364
Query: 364 LTKQKADGALSLLKGVLDYTEFKDVDLVIEAVIENVGLKQTIFSDLEK 411
LT+ KA ALSL KGVLDYTEF DVD+VIEAVIEN+ LKQ IF ++EK
Sbjct: 365 LTQDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEK 412
>AT3G06860.1 | Symbols: MFP2, ATMFP2 | multifunctional protein 2 |
chr3:2161926-2166009 FORWARD LENGTH=725
Length = 725
Score = 447 bits (1149), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/409 (55%), Positives = 294/409 (71%), Gaps = 3/409 (0%)
Query: 5 KVDFEVGNDGVAVITMCNPPVNALAVPIIKALKDRFDEAARRNDVKAIVLTGKGGRFSGG 64
K EVG DGVAVIT+ NPPVN+L+ ++ LK ++EA RNDVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDISVMQKVHQTGDV--TLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGCHA 122
FDIS ++ Q G+V +S++++ + +E ++KP M CHA
Sbjct: 68 FDISGFGEM-QKGNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHA 126
Query: 123 RVAAPRTQLGLPELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLIDA 182
R++AP QLGLPEL LG+IPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG+ LGLIDA
Sbjct: 127 RISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDA 186
Query: 183 IVSPGDLLNVSRRWALEIGERRKPWIRSLHKTDKLGSLSEAREVLKTAREHVKKTAAHLP 242
+V P +L+ +RRWAL+I RRKPW+ S+ KTDKL L EARE+L A+ K A ++
Sbjct: 187 VVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNMK 246
Query: 243 QQQACVDVIEHGIVHGGYSGVLREAEVFKQLVLSETAKGLIHVFFAQRAISKVPGVTDIG 302
C+D IE GIV G +G+ +EAEV Q+V +T KGLIHVFF+QR +KVPGVTD G
Sbjct: 247 HPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRG 306
Query: 303 LKPRNVRKAAVIGGGLMGSGIATALILGNIHVILKEVNSEYLQKGIKFIEANVSGLVRRG 362
L PR ++K A+IGGGLMGSGIATALIL N VILKEVN ++L+ GI ++AN+ VR+G
Sbjct: 307 LVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKG 366
Query: 363 KLTKQKADGALSLLKGVLDYTEFKDVDLVIEAVIENVGLKQTIFSDLEK 411
++++K + +SLLKG LDY F+DVD+VIEAVIEN+ LKQ IF+DLEK
Sbjct: 367 SMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEK 415
>AT4G16210.1 | Symbols: ECHIA, E-COAH-2 | enoyl-CoA
hydratase/isomerase A | chr4:9176864-9177978 REVERSE
LENGTH=265
Length = 265
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 14 GVAVITMCNP-PVNALAVPIIKALKDRFDEAARRNDVKAIVLTGKGGRFSGGFDISVMQK 72
G+AVIT+ P +N+L ++ L F + V+ ++ TG G F G D++ +
Sbjct: 18 GIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRSFCSGVDLTAAES 77
Query: 73 VHQTGDVTLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGCHARVAAPRTQLG 132
V + GDV D + VV +E +KP + C VA+ +
Sbjct: 78 VFK-GDV---KDPETDPVVQ-MERLRKPIIGAINGFAITAGFELALACDILVASRGAKFM 132
Query: 133 LPELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLIDAIVSPGDLLNV 192
GI P +G +Q+L R++G +KA E+ L S +T++ KLG ++ +V G+ L
Sbjct: 133 DTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVNHVVEEGEALKK 192
Query: 193 SRRWA 197
+R A
Sbjct: 193 AREIA 197
>AT4G16800.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr4:9454931-9457000
REVERSE LENGTH=301
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 4 VKVDFEVGNDGVAVITMCNPPV--NALAVPIIKALKDRFDEAARRNDVKAIVLTGK-GGR 60
VK++ G+D + + PV NA+ ++K+L++ F+ + N + +++ G
Sbjct: 43 VKLNRLSGSDSGIIEVNLDRPVTKNAINKEMLKSLQNAFESIHQDNSARVVMIRSLVPGV 102
Query: 61 FSGGFDISVMQKVHQTGDVTLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGC 120
F G D+ + + + T V S+ + + IE P + C
Sbjct: 103 FCAGADLKERRTMSPSEVHTYVN--SLRYMFSFIEALSIPTIAAIEGAALGGGLEMALAC 160
Query: 121 HARVAAPRTQLGLPELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLI 180
R+ GLPE L IIPG GGTQRL RLVG S + E++ + I + E GL+
Sbjct: 161 DLRICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLV 220
Query: 181 DAIVSPGDLLNVSRRWALEIGER 203
+ V+ G+ + A +I E+
Sbjct: 221 NICVTAGEAHEKAIEMAQQINEK 243
>AT1G60550.1 | Symbols: ECHID, DHNS | enoyl-CoA hydratase/isomerase
D | chr1:22305988-22308092 REVERSE LENGTH=337
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Query: 12 NDGVAVITMCNPPV-NALAVPIIKALKDRFDEAARRNDVKAIVLTGKGGR-FSGGFDISV 69
++G+A IT+ P NA +K L F++A + V I+LTGKG + F G D
Sbjct: 84 DEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAFCSGGD-QA 142
Query: 70 MQKVHQTGDVTLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGCHARVAAPRT 129
++ D V ++V + I KP M C +AA
Sbjct: 143 LRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNA 202
Query: 130 QLGLPELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLIDAIVSPGDL 189
G +G G+ + RLVG KA EM ++ T+ E K+GLI+ +V DL
Sbjct: 203 IFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEAEKMGLINTVVPLEDL 262
Query: 190 LNVSRRWALEIGERRKPWIRSL 211
+ +W EI IR L
Sbjct: 263 EKETVKWCREILRNSPTAIRVL 284
>AT3G15290.1 | Symbols: | 3-hydroxyacyl-CoA dehydrogenase family
protein | chr3:5145054-5146613 FORWARD LENGTH=294
Length = 294
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%)
Query: 308 VRKAAVIGGGLMGSGIATALILGNIHVILKEVNSEYLQKGIKFIEANVSGLVRRGKLTKQ 367
++ V+G G MGSGIA + V L + + + L + I ++V V +G ++K+
Sbjct: 4 MKSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLISKE 63
Query: 368 KADGALSLLKGVLDYTEFKDVDLVIEAVIENVGLKQTIFSDLE 410
D A+ L+ + + D+++EA++E+ +K+ +F DL+
Sbjct: 64 VGDDAMHRLRLTSNLEDLCSADIIVEAIVESEDIKKKLFKDLD 106
>AT5G43280.1 | Symbols: ATDCI1, DCI1 |
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 |
chr5:17367947-17369113 FORWARD LENGTH=278
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 25 VNALAVPIIKALKDRFDEAARRNDVKAIVLTGKGGRFSGGFDISVMQKVH---------- 74
+NAL++ + DV I+L+G G F G D++ + +
Sbjct: 31 LNALSLDFFIEFPKALSSLDQNPDVSVIILSGAGKHFCSGIDLNSLSSISTQSSSGNDRG 90
Query: 75 QTGDVTLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGCHARVAAPRTQLGLP 134
++ + S++ + AIE +KP C R + +
Sbjct: 91 RSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIK 150
Query: 135 ELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLIDAI 183
E+ L I+ G QRLP +VG + A+E+ L ++ + E LGL+ +
Sbjct: 151 EVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDLGLVSKV 199
>AT5G43280.2 | Symbols: ATDCI1, DCI1 |
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 |
chr5:17367947-17368750 FORWARD LENGTH=220
Length = 220
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 25 VNALAVPIIKALKDRFDEAARRNDVKAIVLTGKGGRFSGGFDISVMQKVH---------- 74
+NAL++ + DV I+L+G G F G D++ + +
Sbjct: 31 LNALSLDFFIEFPKALSSLDQNPDVSVIILSGAGKHFCSGIDLNSLSSISTQSSSGNDRG 90
Query: 75 QTGDVTLVPDVSVELVVNAIEDSKKPXXXXXXXXXXXXXXXXXMGCHARVAAPRTQLGLP 134
++ + S++ + AIE +KP C R + +
Sbjct: 91 RSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIK 150
Query: 135 ELTLGIIPGFGGTQRLPRLVGLSKAVEMMLKSKSITSEEGNKLGLIDAI 183
E+ L I+ G QRLP +VG + A+E+ L ++ + E LGL+ +
Sbjct: 151 EVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDLGLVSKV 199