Miyakogusa Predicted Gene

Lj0g3v0340539.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0340539.2 tr|K2T6B4|K2T6B4_PSESY HAD-super family hydrolase
OS=Pseudomonas syringae pv. avellanae str.
ISPaVe0,35.39,5e-19,OS08G0542600 PROTEIN,NULL;
4-NITROPHENYLPHOSPHATASE-RELATED,NULL; seg,NULL; no
description,HAD-like ,CUFF.23308.2
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33255.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   323   1e-88

>AT2G33255.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr2:14098795-14100358
           FORWARD LENGTH=245
          Length = 245

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 149/242 (61%), Positives = 190/242 (78%), Gaps = 2/242 (0%)

Query: 6   ITRAFLSLSSTLPRHXXXXXXXXXXXXXXPLRGVVFDMDGTLTIPVIDFPAMYRAVLGDD 65
           ++R F+SL  TL                  LRGVVFDMDGTLT+PVIDF AMYRAVLG+D
Sbjct: 5   LSRTFISL--TLRPSCSISMANLTTNAKTRLRGVVFDMDGTLTVPVIDFAAMYRAVLGED 62

Query: 66  EYRRIKAQSPSGIDILSNIDRWPQHQQQQAYDTIADFERQALLHLQIMPGAADLCRLLDS 125
            Y+RIKA+SPSGIDIL +I+ W   +QQ+AY+ IAD+E+Q +  LQIMPG A+LC  LDS
Sbjct: 63  AYKRIKAESPSGIDILHHIESWSPDKQQKAYEIIADYEKQGIDKLQIMPGTAELCGFLDS 122

Query: 126 KQIRRGLITRNVKSAVDIFHERFGITFAPALSREFRPYKPDPAPLLHICSLWEVQPNEVI 185
           K+I+RGLITRNV+ A+DIFH+RF + F+PAL REFRPYKP+P PLLHICS W++QPNEV+
Sbjct: 123 KKIKRGLITRNVQKAIDIFHQRFEVIFSPALGREFRPYKPNPDPLLHICSTWDIQPNEVM 182

Query: 186 MIGDSLKDDVVCGRQAGAFTCLLDQTGRYDSFHYANVGFKPDFKVTSLAEVYSILEANFD 245
           M+GDSLKDD+ CG++AGAFTCLLD+TGRY    ++  G +PDFKV SL+++ ++LE NFD
Sbjct: 183 MVGDSLKDDIACGKRAGAFTCLLDETGRYGPDDFSVSGLQPDFKVDSLSKIQNLLETNFD 242

Query: 246 LS 247
           L+
Sbjct: 243 LN 244