Miyakogusa Predicted Gene

Lj0g3v0340149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0340149.1 Non Chatacterized Hit- tr|J3LV29|J3LV29_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,39.29,0.0000000005,OS02G0605400 PROTEIN,NULL; EXTENDED
SYNAPTOTAGMIN-RELATED,NULL; C2,C2 membrane targeting protein;
C2,CUFF.23413.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59660.1 | Symbols:  | C2 domain-containing protein / GRAM do...   114   3e-26

>AT3G59660.1 | Symbols:  | C2 domain-containing protein / GRAM
           domain-containing protein | chr3:22034426-22038484
           REVERSE LENGTH=594
          Length = 594

 Score =  114 bits (284), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/135 (44%), Positives = 74/135 (54%), Gaps = 14/135 (10%)

Query: 13  LFPSLWEIQVXXXXXXXXXXXYRFFTFRTADSSA------DRSL------SDHSADDDKI 60
           L PS WEI+V           Y  F +R            DRS       S  + D DKI
Sbjct: 9   LLPSAWEIEVAVVASVFLIASYWLFAYRGGGDDDVVGVGFDRSRLMQNLDSGDAFDKDKI 68

Query: 61  G-LKGDSAS-SGYLIKLEXXXXXXXXXXXXXGTSDPYVIITCGNEKRFSSMVPGSRNPMW 118
           G L+GD+ + + Y++K+E             GTSDPY I+ CG+EKRFSSMVPGSRNPMW
Sbjct: 69  GHLRGDTQTNAAYIVKVELLAAKNLIGANLNGTSDPYAIVNCGSEKRFSSMVPGSRNPMW 128

Query: 119 GEEFNFSVDELPVQV 133
           GEEFNF  DELP ++
Sbjct: 129 GEEFNFPTDELPAKI 143