Miyakogusa Predicted Gene
- Lj0g3v0339859.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0339859.1 tr|G4XE00|G4XE00_BRAOL Organelle transcript
processing 82 (Fragment) OS=Brassica oleracea GN=otp82
P,28.4,3e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; PPR_2,P,CUFF.23247.1
(638 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 733 0.0
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 470 e-132
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 469 e-132
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 449 e-126
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 436 e-122
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 432 e-121
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 416 e-116
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 416 e-116
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-116
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 409 e-114
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 405 e-113
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 402 e-112
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 396 e-110
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 392 e-109
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-106
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 384 e-106
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 378 e-105
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 377 e-104
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 377 e-104
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 375 e-104
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 374 e-104
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-104
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 372 e-103
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 372 e-103
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 370 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 367 e-102
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-100
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 361 e-100
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 1e-99
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 7e-99
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 346 3e-95
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 7e-95
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 9e-95
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 9e-95
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 3e-94
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 334 1e-91
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 322 5e-88
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 317 2e-86
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 308 1e-83
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 307 1e-83
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 7e-83
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 298 7e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 4e-80
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 287 2e-77
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 8e-77
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 284 1e-76
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 277 2e-74
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 6e-72
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 7e-71
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 265 8e-71
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 7e-69
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 257 2e-68
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 251 8e-67
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 1e-66
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 233 3e-61
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 7e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 7e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 216 3e-56
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 204 2e-52
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 3e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 189 5e-48
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 8e-44
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 4e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 102 1e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 96 6e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 4e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 90 4e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 6e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 86 6e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 80 5e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 79 1e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 78 2e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 78 2e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 78 2e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 77 3e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 5e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 2e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 5e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 62 9e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 62 1e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 60 4e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 1e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 56 7e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 2e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 7e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/614 (58%), Positives = 457/614 (74%), Gaps = 11/614 (1%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+T WN+RL EL+ Q + E++SLYR MLRS KSCA LSLP++G QLH
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE---THNLPISYNAMISGYSLNSMF 144
HV + G + +P+ ++LISMY KC L AR+VF+E + L + YNA+ISGY+ NS
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
DA +FRRM+ E G S +SVTMLGLV C +P +L G LHG V GLD+++
Sbjct: 138 TDAAYMFRRMK-ETGVSV-----DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
AV+NSF+TMY+KCG VE R+LFDEM V+ LI+WNA++SGY+QNG A VLELY +MK
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
+ PDP TL++VLSSCA+LGA+ +G EV + +E GF N F++NA I+MYARCGNLA+A
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 325 RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA 384
RAVFD M KS+VSWTA + LFD+M++ G+RPD VFV VLSACSH+
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 385 GLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGA 444
GLTDKGL F M+R+Y L+PGPEHYSCLVDLLGRAGRL EAM+ I+SM V+PDGAVWGA
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGA 431
Query: 445 LLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
LLGACKIHKNV++AELAF VIE EP NIGYYVL+SNIYSD+KN EG+ R+RVMMRER
Sbjct: 432 LLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAF 491
Query: 505 RKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVRSEELL 564
RK PG SYVE+KG+VH+F +GDR+H Q +E++R + ELE SVME+ + R EE+
Sbjct: 492 RKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD--RGEEVS 549
Query: 565 NGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRF 624
+ HSERLAIAF +L++ PGTEI ++KNLRVC DCH+F+K VSKIV+RQF++RDA+RF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 625 HHFRDGVCSCKDYW 638
H+F+DGVCSCKDYW
Sbjct: 610 HYFKDGVCSCKDYW 623
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 374/617 (60%), Gaps = 8/617 (1%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+WN + +L++ EAL + M + S K+C+ L +G Q H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAV 148
G Q D + S+LI MYS C AR+VFDE I S+ +MI GY LN DAV
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
SLF+ + ++ +S+ ++ ++S C+ +H + G D ++V N
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGN 222
Query: 209 SFLTMYVKCGE--VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRR 265
+ L Y K GE V +AR++FD+++ +D +S+N+++S YAQ+G + E++ + K +
Sbjct: 223 TLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV 282
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
++ + +TL VL + ++ GA +G + ++ + G + + ++I+MY +CG + AR
Sbjct: 283 VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
FD M +K+V SWTA A+ELF M+ SGVRP+ FV+VL+ACSHAG
Sbjct: 343 KAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
L +G +F+ M+ ++G++PG EHY C+VDLLGRAG L++A DLI+ MK+KPD +W +L
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 446 LGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
L AC+IHKNVELAE++ + EL+ +N GYY+LLS+IY+DA + V RVR++M+ R L
Sbjct: 463 LAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Query: 506 KDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEK----YRVRSE 561
K PG S +E G+VHVF GD HPQ ++IY +AEL ++E + V E
Sbjct: 523 KPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE 582
Query: 562 ELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDA 621
E VHSE+LAIAF +++T PG+ + ++KNLRVC DCH +KL+SKIV+R+F++RDA
Sbjct: 583 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 642
Query: 622 TRFHHFRDGVCSCKDYW 638
RFHHF+DG CSC DYW
Sbjct: 643 KRFHHFKDGGCSCGDYW 659
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 234 DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
D+ SWN++++ A++G +A L + M+ + P + + +C++L G +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXX 353
++ G+ S+ F+++ALI MY+ CG L AR VFD + +++VSWT+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 354 XAVELFDEMVRSGVRPDRTVF------VTVLSACSHA---GLTDKGLHYFDEMERKYGLQ 404
AV LF +++ D +F V+V+SACS GLT+ +H F K G
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES-IHSF---VIKRGFD 215
Query: 405 PGPEHYSCLVDLLGRAG 421
G + L+D + G
Sbjct: 216 RGVSVGNTLLDAYAKGG 232
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/623 (40%), Positives = 355/623 (56%), Gaps = 15/623 (2%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSS-XXXXXXXXXXXXKSCAILSLPL 80
R P T WN + K Y E++ ++R ++ S + A L
Sbjct: 179 RMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR 238
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYS 139
G Q+H+ +TG Y + IS+YSKC + +F E I +YNAMI GY+
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT 298
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
N ++SLF+ + S T++ LV + HL +HG +
Sbjct: 299 SNGETELSLSLFKELMLSGA------RLRSSTLVSLVP---VSGHLMLIYAIHGYCLKSN 349
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+ +V + T+Y K E+E AR+LFDE + L SWNAM+SGY QNG + L+
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
EM+ SP+PVT+ +LS+CA LGA +G V + F S+ +++ ALI MYA+CG
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
++A AR +FD M K+ V+W A+ +F EM+ SG+ P F+ VL
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
ACSHAGL +G F+ M +YG +P +HY+C+VD+LGRAG L+ A+ I++M ++P
Sbjct: 530 ACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGS 589
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
+VW LLGAC+IHK+ LA E + EL+P N+GY+VLLSNI+S +N VR
Sbjct: 590 SVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTA 649
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEK--- 555
++RKL K PG + +E HVF SGD++HPQ+KEIY K+ +LE + E ++P+ +
Sbjct: 650 KKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL 709
Query: 556 YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQ 615
+ V EE VHSERLAIAF L++T PGTEI I+KNLRVC+DCH KL+SKI R
Sbjct: 710 HDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERV 769
Query: 616 FIIRDATRFHHFRDGVCSCKDYW 638
++RDA RFHHF+DGVCSC DYW
Sbjct: 770 IVVRDANRFHHFKDGVCSCGDYW 792
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 7/302 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
Q HA +I G + D + L S + AR +F + +N ++ G+S+N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
++S+F +R+ + NS T +S + G +HG AV G D+
Sbjct: 98 SPHSSLSVFAHLRK-----STDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
+L + ++ + MY K VE AR++FD M +D I WN M+SGY +N ++++ ++
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 263 LRRMSP-DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ D TLL +L + A L +G+++ + G S+ ++ I++Y++CG +
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
A+F +V++ A ++ LF E++ SG R + V+++
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 382 SH 383
H
Sbjct: 333 GH 334
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/616 (37%), Positives = 371/616 (60%), Gaps = 16/616 (2%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + S+ +++AL +Y +M + K+C+ LS G +HA V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSMFAD 146
R G D + ++ LI++Y+KC AR VF E LP +S+ A++S Y+ N +
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A+ +F +MR+ D VK ++ V ++ +++ L G +H V GL+ + +
Sbjct: 206 ALEIFSQMRKMD----VKPDW--VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+ S TMY KCG+V A+ LFD+M +LI WNAM+SGYA+NG+A ++++HEM + +
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
PD +++ + +S+CA +G+ + + + + + F+++ALI+M+A+CG++ AR
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
VFD +D+ VV W+A A+ L+ M R GV P+ F+ +L AC+H+G+
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+G +F+ M + + P +HY+C++DLLGRAG L +A ++IK M V+P VWGALL
Sbjct: 440 VREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
ACK H++VEL E A + + ++P+N G+YV LSN+Y+ A+ + V VRV M+E+ L K
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Query: 507 DPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME----IHRPDEKYRVRSEE 562
D GCS+VE +G++ F GD++HP+ +EI R+V +E+ + E ++ + + EE
Sbjct: 559 DVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEE 618
Query: 563 LLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDAT 622
HSER+AIA+ L+ST GT + I KNLR CV+CH KL+SK+V+R+ ++RD
Sbjct: 619 AEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTN 678
Query: 623 RFHHFRDGVCSCKDYW 638
RFHHF+DGVCSC DYW
Sbjct: 679 RFHHFKDGVCSCGDYW 694
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 181/372 (48%), Gaps = 11/372 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
Q+HA ++ G Q + + LI S AR+VFD+ I +NA+I GYS N+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
F DA+ ++ M+ + + +S T L+ C+ +HL G +H G DA
Sbjct: 99 HFQDALLMYSNMQ------LARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLV--RDLISWNAMVSGYAQNGHAARVLELYHE 260
D+ V N + +Y KC + AR +F+ + + R ++SW A+VS YAQNG LE++ +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M+ + PD V L++VL++ L G + + + G P L +L MYA+CG
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+A A+ +FD M +++ W A A+++F EM+ VRPD + +SA
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
C+ G ++ ++ + R + S L+D+ + G + E L+ + D
Sbjct: 333 CAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVV 390
Query: 441 VWGALLGACKIH 452
VW A++ +H
Sbjct: 391 VWSAMIVGYGLH 402
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/666 (36%), Positives = 368/666 (55%), Gaps = 73/666 (10%)
Query: 27 PTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLH 86
P AW + + Q + +AL+ + M S KSC ++ G +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 87 AHVIRTGSQPDPYTRSSLISMYSK---------------------------------CSL 113
++R G D YT ++L++MY+K C +
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 114 PF---LARRVFDETHNLP----ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFN 166
PF RRVF+ +P +SYN +I+GY+ + M+ DA+ RM RE G++ +K +
Sbjct: 189 PFGIDSVRRVFEV---MPRKDVVSYNTIIAGYAQSGMYEDAL----RMVREMGTTDLKPD 241
Query: 167 FNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQL 226
S T+ ++ + + G +HG + G+D+D+ + +S + MY K +E + ++
Sbjct: 242 --SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 227 FDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQ 286
F + RD ISWN++V+GY QNG L L+ +M ++ P V +V+ +CA+L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 287 VVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXX 346
+G ++ + + GFGSN F+ +AL++MY++CGN+ AR +FD M VSWTA
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 347 XXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPG 406
AV LF+EM R GV+P++ FV VL+ACSH GL D+ YF+ M + YGL
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 407 PEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI 466
EHY+ + DLLGRAG+L+EA + I M V+P G+VW LL +C +HKN+ELAE E +
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 467 ELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGD 526
++ N+G YVL+ N+Y+ + + ++R+ MR++ LRK P CS++E K K H F SGD
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Query: 527 RNHPQMKEIYRKVAELENSVME--------------IHRPDEKYRVRSEELLNGNGVHSE 572
R+HP M K+ E +VME +H DE+++ ELL G HSE
Sbjct: 600 RSHPSMD----KINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK---RELLFG---HSE 649
Query: 573 RLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVC 632
RLA+AF +++T PGT I + KN+R+C DCH+ +K +SKI R+ I+RD +RFHHF G C
Sbjct: 650 RLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNC 709
Query: 633 SCKDYW 638
SC DYW
Sbjct: 710 SCGDYW 715
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/634 (37%), Positives = 357/634 (56%), Gaps = 35/634 (5%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
WN L L + Q EAL R M+ +C+ L + TG +LHA+
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 89 VIRTGS-QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFAD 146
++ GS + + S+L+ MY C RRVFD + I +NAMI+GYS N +
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A+ LF M G NS TM G+V C +HG V GLD D V
Sbjct: 388 ALLLFIGMEESAG-----LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK-LRR 265
N+ + MY + G++++A ++F +M RDL++WN M++GY + H L L H+M+ L R
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 266 ----------MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+ P+ +TL+ +L SCA L A G E+ + ++ + +AL++MY
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
A+CG L +R VFD + K+V++W A++L M+ GV+P+ F+
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
+V +ACSH+G+ D+GL F M+ YG++P +HY+C+VDLLGRAGR+KEA L+ M
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 436 KPDGA-VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLR 494
+ A W +LLGA +IH N+E+ E+A +++I+LEP +YVLL+NIYS A +
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 495 VRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI----------YRKVAELEN 544
VR M+E+ +RK+PGCS++E+ +VH F +GD +HPQ +++ RK + +
Sbjct: 743 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Query: 545 SVMEIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIF 604
+ +H +E + E LL G HSE+LAIAF +L+T PGT I + KNLRVC DCH+
Sbjct: 803 TSCVLHNVEEDEK---EILLCG---HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 856
Query: 605 MKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
K +SKIV+R+ I+RD RFH F++G CSC DYW
Sbjct: 857 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 184/398 (46%), Gaps = 22/398 (5%)
Query: 82 GFQLHAHVIRTGSQPDPYT-RSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYS 139
G Q+HAHV + G D T ++L+++Y KC +VFD + +S+N++IS
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC-NLPNHLPTGTCLHGCAVTF 198
+ A+ FR M E+ + S T++ +V+ C NLP +P G + +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPS------SFTLVSVVTACSNLP--MPEGLMMGKQVHAY 227
Query: 199 GL---DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
GL + + ++N+ + MY K G++ ++ L RDL++WN ++S QN L
Sbjct: 228 GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER-KIEQCGFGSNPFLTNALINM 314
E EM L + PD T+ +VL +C++L G E+ ++ N F+ +AL++M
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS-GVRPDRTV 373
Y C + R VFDGM D+ + W A A+ LF M S G+ + T
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 374 FVTVLSACSHAGLTDK--GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
V+ AC +G + +H F K GL + L+D+ R G++ AM +
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGF---VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG 464
Query: 432 SMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
M+ + D W ++ ++ E A L + LE
Sbjct: 465 KMEDR-DLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/624 (37%), Positives = 349/624 (55%), Gaps = 16/624 (2%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P +WN + S+ + AL + + M + + + L L
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSL 140
G ++H + +R+G ++L+ MY+KC AR++FD +S+N+MI Y
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N +A+ +F++M E T V+++G + C L G +H +V GL
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPT------DVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D +++V+NS ++MY KC EV+ A +F ++ R L+SWNAM+ G+AQNG L + +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M+ R + PD T ++V+++ A L + + + N F+T AL++MYA+CG
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ AR +FD M ++ V +W A A+ELF+EM + ++P+ F++V+SA
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH+GL + GL F M+ Y ++ +HY +VDLLGRAGRL EA D I M VKP
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
V+GA+LGAC+IHKNV AE A E + EL P + GY+VLL+NIY A E V +VRV M
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVR 559
+ LRK PGCS VE K +VH F+SG HP K+IY + +L + E + PD +
Sbjct: 669 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLG 728
Query: 560 -----SEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
E+LL+ HSE+LAI+F LL+T GT I + KNLRVC DCH K +S + R
Sbjct: 729 VENDVKEQLLS---THSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGR 785
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
+ ++RD RFHHF++G CSC DYW
Sbjct: 786 EIVVRDMQRFHHFKNGACSCGDYW 809
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 182/364 (50%), Gaps = 9/364 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYSLNS 142
Q+ V + G + + ++ L+S++ + A RVF+ + L + Y+ M+ G++ S
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
A+ F RMR +D V +NF L+ C L G +HG V G
Sbjct: 115 DLDKALQFFVRMRYDDVEPVV-YNFTY-----LLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
DL M MY KC +V AR++FD M RDL+SWN +V+GY+QNG A LE+ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ P +T+++VL + + L VG E+ + GF S ++ AL++MYA+CG+L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
AR +FDGM++++VVSW + A+ +F +M+ GV+P + L AC+
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
G ++G + ++ + GL + L+ + + + A + ++ + + W
Sbjct: 349 DLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS-W 406
Query: 443 GALL 446
A++
Sbjct: 407 NAMI 410
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 211/427 (49%), Gaps = 18/427 (4%)
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMIS 136
G ++H ++++G D + + L +MY+KC AR+VFD +P +S+N +++
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR---MPERDLVSWNTIVA 209
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
GYS N M A+ + + M E+ +K +F +T++ ++ + + G +HG A+
Sbjct: 210 GYSQNGMARMALEMVKSMCEEN----LKPSF--ITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 197 TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLE 256
G D+ + + + + MY KCG +E ARQLFD ML R+++SWN+M+ Y QN + +
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
++ +M + P V+++ L +CA+LG G + + + G N + N+LI+MY
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 317 RCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
+C + A ++F + +++VSW A A+ F +M V+PD +V+
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
V++A + +T + + + L + LVD+ + G + A LI M +
Sbjct: 444 VITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSE 501
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLR 494
W A++ H + A FE + + ++P + + ++S S + E L+
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC-SHSGLVEAGLK 560
Query: 495 VRVMMRE 501
MM+E
Sbjct: 561 CFYMMKE 567
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/622 (36%), Positives = 358/622 (57%), Gaps = 17/622 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +WN + + KEAL+L + LR+ +C G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTL-SNGLRA---MDSVTVVSLLSACTEAGDFNRGV 267
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
+H++ I+ G + + + + LI +Y++ ++VFD + IS+N++I Y LN
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG-LD 201
A+SLF+ MR + + +T++ L S + + + G + G
Sbjct: 328 QPLRAISLFQEMRLS------RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D+ + N+ + MY K G V+ AR +F+ + D+ISWN ++SGYAQNG A+ +E+Y+ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 262 KLR-RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
+ ++ + T ++VL +C+ GA G+++ ++ + G + F+ +L +MY +CG
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
L A ++F + + V W AV LF EM+ GV+PD FVT+LSA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH+GL D+G F+ M+ YG+ P +HY C+VD+ GRAG+L+ A+ IKSM ++PD +
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
+WGALL AC++H NV+L ++A EH+ E+EP ++GY+VLLSN+Y+ A EGV +R +
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVR 559
+ LRK PG S +E KV VFY+G++ HP +E+YR++ L+ + I + PD ++ ++
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 560 SEELLNGNGV---HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQF 616
E + HSERLAIAFAL++T T I I KNLRVC DCH K +SKI R+
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801
Query: 617 IIRDATRFHHFRDGVCSCKDYW 638
I+RD+ RFHHF++GVCSC DYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 226/460 (49%), Gaps = 27/460 (5%)
Query: 30 AWNLRLMELSKQRQYKEALSLYR-HMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
AWNL + + E + + ML S K+C + + G ++H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCL 175
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI----SYNAMISGYSLNSMF 144
++ G D Y +SLI +YS+ AR +FDE +P+ S+NAMISGY +
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE---MPVRDMGSWNAMISGYCQSGNA 232
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
+A++L +R D SVT++ L+S C G +H ++ GL+++L
Sbjct: 233 KEALTLSNGLRAMD----------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
V N + +Y + G + +++FD M VRDLISWN+++ Y N R + L+ EM+L
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVER-KIEQCGFGSNPFLTNALINMYARCGNLAR 323
R+ PD +TL+++ S + LG V+ + + F + + NA++ MYA+ G +
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACS 382
ARAVF+ + + V+SW A+E+++ M G + ++ +V+VL ACS
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
AG +G+ + K GL + L D+ G+ GRL++A+ L + + + W
Sbjct: 463 QAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPW 520
Query: 443 GALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
L+ H + E A + F+ +++ ++P +I + LLS
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 145/302 (48%), Gaps = 13/302 (4%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSM 143
LHA ++ + + + L+++Y LAR FD N + ++N MISGY
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
++ + F G + F SV + C + G +H A+ FG D
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSV-----LKACRT---VIDGNKIHCLALKFGFMWD 184
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ V S + +Y + V AR LFDEM VRD+ SWNAM+SGY Q+G+A L L + L
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN--GL 242
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
R M D VT++++LS+C G GV + + G S F++N LI++YA G L
Sbjct: 243 RAM--DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
+ VFD M + ++SW + A+ LF EM S ++PD +++ S S
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 384 AG 385
G
Sbjct: 361 LG 362
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 12/274 (4%)
Query: 183 NHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMV 242
+L + CLH V ++ + + +Y G V LAR FD + RD+ +WN M+
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 243 SGYAQNGHAARVLELYHEMKLRR-MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF 301
SGY + G+++ V+ + L ++PD T +VL +C + + G ++ + GF
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGF 181
Query: 302 GSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDE 361
+ ++ +LI++Y+R + AR +FD M + + SW A A+ L
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 362 MVRSGVRP-DRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRA 420
+G+R D V++LSAC+ AG ++G+ K+GL+ + L+DL
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRGV-TIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 421 GRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKN 454
GRL++ + M V+ D W +++ A ++++
Sbjct: 296 GRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQ 328
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/648 (37%), Positives = 356/648 (54%), Gaps = 48/648 (7%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + AL LY M+ KSCA G Q+H HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-------------------------- 124
+ G D Y +SLISMY + A +VFD++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 125 --HNLPI----SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSG 178
+P+ S+NAMISGY+ + +A+ LF+ M + + + TM+ +VS
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN------VRPDESTMVTVVSA 275
Query: 179 CNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISW 238
C + G +H G ++L ++N+ + +Y KCGE+E A LF+ + +D+ISW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG----VEVER 294
N ++ GY L L+ EM +P+ VT+L++L +CA+LGA +G V +++
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+++ G + L +LI+MYA+CG++ A VF+ ++ KS+ SW A
Sbjct: 396 RLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
+ +LF M + G++PD FV +LSACSH+G+ D G H F M + Y + P EHY C++
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
DLLG +G KEA ++I M+++PDG +W +LL ACK+H NVEL E E++I++EP N G
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 475 YYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKE 534
YVLLSNIY+ A V + R ++ ++ ++K PGCS +E VH F GD+ HP+ +E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 535 IYRKVAELENSVMEI-HRPDEKYRVRSEELLNGNGV---HSERLAIAFALLSTRPGTEIT 590
IY + E+E + + PD ++ E G HSE+LAIAF L+ST+PGT++T
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 591 IMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
I+KNLRVC +CH KL+SKI R+ I RD TRFHHFRDGVCSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 212/464 (45%), Gaps = 57/464 (12%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKC-------SLPFLARRVFDETH--NLPISYNAMI 135
+HA +I+ G Y S LI C LP+ A VF NL I +N M
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPY-AISVFKTIQEPNLLI-WNTMF 106
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
G++L+S A+ L+ M ++ NS T ++ C G +HG
Sbjct: 107 RGHALSSDPVSALKLYVCM------ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAM-------------- 241
+ G D DL V S ++MYV+ G +E A ++FD+ RD++S+ A+
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 242 -----------------VSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
+SGYA+ G+ LEL+ +M + PD T++ V+S+CA G
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
+ +G +V I+ GFGSN + NALI++Y++CG L A +F+ + K V+SW
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 340
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYG 402
A+ LF EM+RSG P+ +++L AC+H G D G +H + + +R G
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID-KRLKG 399
Query: 403 LQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
+ + L+D+ + G ++ A + S+ K + W A++ +H + + F
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMHGRADASFDLF 458
Query: 463 EHV--IELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
+ I ++P +I + LLS G R M ++ K+
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 139/281 (49%), Gaps = 15/281 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +WN + ++ YKEAL L++ M++++ +CA G
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYS 139
Q+H + G + ++LI +YSKC A +F+ LP IS+N +I GY+
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER---LPYKDVISWNTLIGGYT 343
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT-- 197
+++ +A+ LF+ M R + N VTML ++ C + G +H
Sbjct: 344 HMNLYKEALLLFQEMLRSGETP------NDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
G+ ++ S + MY KCG++E A Q+F+ +L + L SWNAM+ G+A +G A +L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
+ M+ + PD +T + +LS+C++ G +G + R + Q
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 9/171 (5%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
+R P +WN + + YKEAL L++ MLRS +CA L
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 81 TGFQLHAHVIR--TGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISG 137
G +H ++ + G R+SLI MY+KC A +VF+ H S+NAMI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++++ + LF RMR+ + + +T +GL+S C+ L G
Sbjct: 445 FAMHGRADASFDLFSRMRK------IGIQPDDITFVGLLSACSHSGMLDLG 489
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/623 (35%), Positives = 331/623 (53%), Gaps = 19/623 (3%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
V WN+ L+ + + ++R M K+C L G Q
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSK-----CSLPFLARRVFDETHNLPISYNAMISGYS 139
+H+ +I+T Q + Y S LI MY+K + L R + +S+ MI+GY+
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV----VSWTTMIAGYT 567
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ A++ FR+M S + V + VS C L G +H A G
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRS------DEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+DL N+ +T+Y +CG++E + F++ D I+WNA+VSG+ Q+G+ L ++
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
M + + T + + + + G +V I + G+ S + NALI+MYA+CG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+++ A F + K+ VSW A A++ FD+M+ S VRP+ V VLS
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
ACSH GL DKG+ YF+ M +YGL P PEHY C+VD+L RAG L A + I+ M +KPD
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
VW LL AC +HKN+E+ E A H++ELEP + YVLLSN+Y+ +K + R M
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 921
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVR 559
+E+ ++K+PG S++E K +H FY GD+NHP EI+ +L EI + + +
Sbjct: 922 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 981
Query: 560 SEELLNGNG----VHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQ 615
+E +HSE+LAI+F LLS I +MKNLRVC DCH ++K VSK+ NR+
Sbjct: 982 NELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNRE 1041
Query: 616 FIIRDATRFHHFRDGVCSCKDYW 638
I+RDA RFHHF G CSCKDYW
Sbjct: 1042 IIVRDAYRFHHFEGGACSCKDYW 1064
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 183/441 (41%), Gaps = 21/441 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
++W + LSK EA+ L+ M +C + G QLH
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADA 147
V++ G D Y ++L+S+Y A +F + ++YN +I+G S A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ LF+RM DG +S T+ LV C+ L G LH G ++ +
Sbjct: 374 MELFKRMHL-DGLEP-----DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
+ L +Y KC ++E A F E V +++ WN M+ Y ++ +M++ +
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
P+ T ++L +C LG +G ++ +I + F N ++ + LI+MYA+ G L A +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
K VVSWT A+ F +M+ G+R D +SAC+
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA----- 602
Query: 388 DKGLHYFDEMERKY------GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV 441
GL E ++ + G + LV L R G+++E+ + + D
Sbjct: 603 --GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA-GDNIA 659
Query: 442 WGALLGACKIHKNVELAELAF 462
W AL+ + N E A F
Sbjct: 660 WNALVSGFQQSGNNEEALRVF 680
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 170/371 (45%), Gaps = 14/371 (3%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G +LH+ +++ G + L Y + A +VFDE I ++N MI +
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPN-HLPTGTCLHGCAVTFG 199
++ + LF RM E+ + N T G++ C + +H + G
Sbjct: 164 RNLIGEVFGLFVRMVSENVTP------NEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L V N + +Y + G V+LAR++FD + ++D SW AM+SG ++N A + L+
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
+M + + P P +VLS+C + + +G ++ + + GF S+ ++ NAL+++Y G
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
NL A +F M + V++ A+ELF M G+ PD +++
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 380 ACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
ACS G +G LH + K G + L++L + ++ A+D +V+
Sbjct: 398 ACSADGTLFRGQQLHAY---TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE- 453
Query: 438 DGAVWGALLGA 448
+ +W +L A
Sbjct: 454 NVVLWNVMLVA 464
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 130/322 (40%), Gaps = 45/322 (13%)
Query: 168 NSVTMLGLVSGCNLPN-HLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQL 226
N T+ L+ GC N L G LH + GLD++ + Y+ G++ A ++
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 227 FDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQ 286
FDEM R + +WN M+ A V L+ M ++P+ T VL +C
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 287 VVGVE-VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
VE + +I G + + N LI++Y+R G + AR VFDG+ K SW A
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 346 XXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS----------------------- 382
A+ LF +M G+ P F +VLSAC
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 383 ------------HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
H G H F M ++ + Y+ L++ L + G ++AM+L
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLSQCGYGEKAMELF 377
Query: 431 KSMK---VKPDGAVWGALLGAC 449
K M ++PD +L+ AC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVAC 399
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/599 (38%), Positives = 343/599 (57%), Gaps = 52/599 (8%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPF--LARRVFDETH-NLPISYNAMISGYSL 140
Q+H HV+R G Y + LI +K +P ARRV + P + A+I GY++
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
F +A++++ MR+E+ + V F F++ L+ C L G H A TF L
Sbjct: 127 EGKFDEAIAMYGCMRKEE-ITPVSFTFSA-----LLKACGTMKDLNLGRQFH--AQTFRL 178
Query: 201 DAD--LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWN------------------- 239
+ V N+ + MYVKC ++ AR++FDEM RD+ISW
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 240 ------------AMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
AMV+G+AQN LE + M+ + D VT+ +S+CA LGA
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 288 VGVEVERKIEQCGFGSNP--FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
+ ++ G+ + + +ALI+MY++CGN+ A VF M +K+V ++++
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 346 XXXXXXXXXAVELFDEMV-RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A+ LF MV ++ ++P+ FV L ACSH+GL D+G FD M + +G+Q
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
P +HY+C+VDLLGR GRL+EA++LIK+M V+P G VWGALLGAC+IH N E+AE+A EH
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 465 VIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSY-VEYKGKVHVFY 523
+ ELEP IG Y+LLSN+Y+ A + GVLRVR +++E+ L+K P S+ V+ G++H F+
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 524 SGDRNHPQMKEIYRKVAEL-ENSVMEIHRPDEK---YRVRSEELLNGNGVHSERLAIAFA 579
G+ NHP +I K+ EL E + ++PD Y V H+E+LA+AF+
Sbjct: 539 PGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 598
Query: 580 LLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
LL+T + ITIMKNLR+C+DCH FM+L S++ + I+RD RFHHFR G CSC D+W
Sbjct: 599 LLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/620 (36%), Positives = 350/620 (56%), Gaps = 22/620 (3%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+WN + ++ LS++ ML S CA L G +H+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAV 148
++ + ++L+ MYSKC A+ VF E + + SY +MI+GY+ + +AV
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
LF M E S V T+ +++ C L G +H L D+ V N
Sbjct: 383 KLFEEMEEEGISPDV------YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMS 267
+ + MY KCG ++ A +F EM V+D+ISWN ++ GY++N +A L L++ + + +R S
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
PD T+ VL +CA+L A G E+ I + G+ S+ + N+L++MYA+CG L A +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
FD + K +VSWT A+ LF++M ++G+ D FV++L ACSH+GL
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
D+G +F+ M + ++P EHY+C+VD+L R G L +A I++M + PD +WGALL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
C+IH +V+LAE E V ELEP N GYYVL++NIY++A+ E V R+R + +R LRK+
Sbjct: 677 GCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 736
Query: 508 PGCSYVEYKGKVHVFYSGDRNHPQMKEI---YRKVAELENSVMEIHRPDEKY------RV 558
PGCS++E KG+V++F +GD ++P+ + I RKV + E + P KY +
Sbjct: 737 PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR--ARMIEEGYSPLTKYALIDAEEM 794
Query: 559 RSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFII 618
EE L G HSE+LA+A ++S+ G I + KNLRVC DCH K +SK+ R+ ++
Sbjct: 795 EKEEALCG---HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVL 851
Query: 619 RDATRFHHFRDGVCSCKDYW 638
RD+ RFH F+DG CSC+ +W
Sbjct: 852 RDSNRFHQFKDGHCSCRGFW 871
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 219/478 (45%), Gaps = 12/478 (2%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN+ + EL+K + ++ L++ M+ S KS + L G QLH ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVS 149
++G +SL++ Y K AR+VFDE T IS+N++I+GY N + +S
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
+F +M S ++ + T++ + +GC + G +H V + N+
Sbjct: 283 VFVQML----VSGIEIDL--ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
L MY KCG+++ A+ +F EM R ++S+ +M++GYA+ G A ++L+ EM+ +SPD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
T+ AVL+ CA G V I++ G + F++NAL++MYA+CG++ A VF
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTD 388
M K ++SW A+ LF+ ++ PD VL AC+ D
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 389 KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
KG + R G + LVD+ + G L A L + K D W ++
Sbjct: 517 KGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAG 574
Query: 449 CKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
+H + A F + + +E I + LL EG +M E K+
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 26/392 (6%)
Query: 90 IRTGSQPDPYTR-----------SSLISMYSKCSLPFLARRVFDETH-NLPISYNAMISG 137
++ G + D + R S L MY+ C A RVFDE + +N +++
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
+ + F+ ++ LF++M SS V+ + S T + + + G LHG +
Sbjct: 170 LAKSGDFSGSIGLFKKMM----SSGVEMD--SYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
G +V NS + Y+K V+ AR++FDEM RD+ISWN++++GY NG A + L +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ +M + + D T+++V + CA+ +G V + F N L++MY++
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG+L A+AVF M D+SVVS+T+ AV+LF+EM G+ PD V
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 378 LSACSHAGLTDKGLHYFDEM-ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
L+ C+ L D+G + + E G + L+D+ + G ++EA + M+VK
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 437 PDGAVWGALLGA----CKIHKNVELAELAFEH 464
D W ++G C ++ + L L E
Sbjct: 462 -DIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 27/293 (9%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGF 83
V +WN + SK EALSL+ +L +CA LS G
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
++H +++R G D + +SL+ MY+KC LA +FD+ + +S+ MI+GY ++
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-----TCLHGCAVT 197
+A++LF +MR+ + ++ + L+ C+ + G H C +
Sbjct: 580 FGKEAIALFNQMRQ------AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV-RDLISWNAMVSGYAQNGHAARVLE 256
++ +++ M + G++ A + + M + D W A++ G + H ++ E
Sbjct: 634 PTVEHYACIVD----MLARTGDLIKAYRFIENMPIPPDATIWGALLCG-CRIHHDVKLAE 688
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE----VERKIEQCGFGSNP 305
E K+ + P+ ++ AN+ A+ E + ++I Q G NP
Sbjct: 689 KVAE-KVFELEPENTGYYVLM---ANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
DP TL +VL CA+ + G EV+ I GF + L + L MY CG+L A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
D + + + W ++ LF +M+ SGV D F V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/564 (38%), Positives = 332/564 (58%), Gaps = 9/564 (1%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
++H H++ GS DP+ + LI MYS AR+VFD+T I +NA+ +L
Sbjct: 96 ALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ + L+ +M R G + +F + V + S C + NHL G +H G
Sbjct: 156 AGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVASECTV-NHLMKGKEIHAHLTRRGY 213
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ + +M + + MY + G V+ A +F M VR+++SW+AM++ YA+NG A L + E
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 261 M--KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
M + + SP+ VT+++VL +CA+L A G + I + G S + +AL+ MY RC
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G L + VFD M D+ VVSW + A+++F+EM+ +G P FV+VL
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVL 393
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
ACSH GL ++G F+ M R +G++P EHY+C+VDLLGRA RL EA +++ M+ +P
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
VWG+LLG+C+IH NVELAE A + LEP N G YVLL++IY++A+ + V RV+ +
Sbjct: 454 PKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKL 513
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEK-- 555
+ R L+K PG ++E + K++ F S D +P M++I+ + +L + E + P K
Sbjct: 514 LEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGV 573
Query: 556 -YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
Y + +EE HSE+LA+AF L++T G I I KNLR+C DCH+F K +SK + +
Sbjct: 574 LYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEK 633
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
+ ++RD RFH F++GVCSC DYW
Sbjct: 634 EILVRDVNRFHRFKNGVCSCGDYW 657
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/661 (35%), Positives = 355/661 (53%), Gaps = 47/661 (7%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLPLTGF 83
V +WN + +K + K AL ++ M CA L G
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
QLH + + + + + L+ MY+KC + A VF + +S+NAM++GYS
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 143 MFADAVSLFRRMRRE-------------DGSSTVKFNF----------------NSVTML 173
F DAV LF +M+ E G + + N VT++
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 174 GLVSGCNLPNHLPTGTCLHGCAVTFGLDA-------DLAVMNSFLTMYVKCGEVELARQL 226
++SGC L G +H A+ + +D + V+N + MY KC +V+ AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 227 FDEM--LVRDLISWNAMVSGYAQNGHAARVLELYHEM--KLRRMSPDPVTLLAVLSSCAN 282
FD + RD+++W M+ GY+Q+G A + LEL EM + + P+ T+ L +CA+
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 283 LGAQVVGVEVERKIEQCGFGSNP-FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTA 341
L A +G ++ + + P F++N LI+MYA+CG+++ AR VFD M+ K+ V+WT+
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549
Query: 342 XXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
A+ +FDEM R G + D + VL ACSH+G+ D+G+ YF+ M+ +
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
G+ PGPEHY+CLVDLLGRAGRL A+ LI+ M ++P VW A L C+IH VEL E A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 462 FEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHV 521
E + EL + G Y LLSN+Y++A + V R+R +MR + ++K PGCS+VE
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 522 FYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYR---VRSEELLNGNGVHSERLAIA 577
F+ GD+ HP KEIY+ + + + +I + P+ + V EE + HSE+LA+A
Sbjct: 730 FFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
Query: 578 FALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDY 637
+ +L+T G I I KNLRVC DCH +S+I++ I+RD++RFHHF++G CSCK Y
Sbjct: 790 YGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGY 849
Query: 638 W 638
W
Sbjct: 850 W 850
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 204/445 (45%), Gaps = 59/445 (13%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI- 129
K+C +S G HA + TG + + ++L++MYS+C AR+VFDE +
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+N++I Y+ A+ +F RM E G +++T++ ++ C G
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP-----DNITLVNVLPPCASLGTHSLGK 249
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
LH AVT + ++ V N + MY KCG ++ A +F M V+D++SWNAMV+GY+Q G
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 250 H---AARVLELYHEMKLRR--------------------------------MSPDPVTLL 274
A R+ E E K++ + P+ VTL+
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 275 AVLSSCANLGAQVVGVEVE-------RKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
+VLS CA++GA + G E+ + + G G + N LI+MYA+C + ARA+
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 328 FDGMV--DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG--VRPDRTVFVTVLSAC-S 382
FD + ++ VV+WT A+EL EM RP+ L AC S
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 383 HAGL-TDKGLHYFDEMERKYGLQPGPEHYS-CLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
A L K +H + ++ + P S CL+D+ + G + +A + +M K +
Sbjct: 490 LAALRIGKQIHAYALRNQQNAV---PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-V 545
Query: 441 VWGALLGACKIHKNVELAELAFEHV 465
W +L+ +H E A F+ +
Sbjct: 546 TWTSLMTGYGMHGYGEEALGIFDEM 570
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 194/487 (39%), Gaps = 71/487 (14%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+N++I Y N + LF M ++ + ++ T + C + + G
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMH------SLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
H ++ G +++ V N+ + MY +C + AR++FDEM V D++SWN+++ YA+ G
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208
Query: 251 AARVLELYHEMKLR-RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
LE++ M PD +TL+ VL CA+LG +G ++ N F+ N
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 310 ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFD--------- 360
L++MYA+CG + A VF M K VVSW A AV LF+
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 361 --------------------------EMVRSGVRPDRTVFVTVLSACSHAG--LTDKGLH 392
+M+ SG++P+ ++VLS C+ G + K +H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 393 YFDEME----RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP-DGAVWGALLG 447
+ RK G + L+D+ + ++ A + S+ K D W ++G
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 448 ACKIH----KNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERK 503
H K +EL FE + P L A S LR+ +
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV-----ACASLAALRIGKQIHAYA 503
Query: 504 LRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVRSEEL 563
LR + V +F S + ++Y K + ++ + K V L
Sbjct: 504 LRNQ--------QNAVPLFVSN-----CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSL 550
Query: 564 LNGNGVH 570
+ G G+H
Sbjct: 551 MTGYGMH 557
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 124/285 (43%), Gaps = 16/285 (5%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD--LISWNAMVSGYAQN 248
+H ++FG+ L + + ++ Y+ G + A L D + WN+++ Y N
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G A + L L+ M +PD T V +C + + G GF SN F+
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS-GV 367
NAL+ MY+RC +L+ AR VFD M VVSW + A+E+F M G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 368 RPDRTVFVTVLSACSHAGLTDKG--LHYF---DEMERKYGLQPGPEHYSCLVDLLGRAGR 422
RPD V VL C+ G G LH F EM + + +CLVD+ + G
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG------NCLVDMYAKCGM 279
Query: 423 LKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
+ EA + +M VK D W A++ E A FE + E
Sbjct: 280 MDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 342/610 (56%), Gaps = 52/610 (8%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI- 129
K+ A +S G LH +++ D + +SLI Y C A +VF +
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+N+MI+G+ A+ LF++M ED ++ VTM+G++S C +L G
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKAS------HVTMVGVLSACAKIRNLEFGR 252
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFD--------------------- 228
+ ++ +L + N+ L MY KCG +E A++LFD
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 229 ----------EMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR-MSPDPVTLLAVL 277
M +D+++WNA++S Y QNG L ++HE++L++ M + +TL++ L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 278 SSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVV 337
S+CA +GA +G + I++ G N +T+ALI+MY++CG+L ++R VF+ + + V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 338 SWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEM 397
W+A AV++F +M + V+P+ F V ACSH GL D+ F +M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 398 ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVEL 457
E YG+ P +HY+C+VD+LGR+G L++A+ I++M + P +VWGALLGACKIH N+ L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 458 AELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKG 517
AE+A ++ELEP N G +VLLSNIY+ E V +R MR L+K+PGCS +E G
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 518 KVHVFYSGDRNHPQMKEIYRKVAEL---------ENSVMEIHRPDEKYRVRSEELLNGNG 568
+H F SGD HP +++Y K+ E+ E + ++ + E+ ++ + L
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSL----N 668
Query: 569 VHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFR 628
+HSE+LAI + L+ST I ++KNLRVC DCH KL+S++ +R+ I+RD RFHHFR
Sbjct: 669 LHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFR 728
Query: 629 DGVCSCKDYW 638
+G CSC D+W
Sbjct: 729 NGQCSCNDFW 738
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 193/407 (47%), Gaps = 48/407 (11%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL--ARRVFDETHNLP----ISYNAMISG 137
Q H H+IRTG+ DPY+ S L +M + S L AR+VFDE +P ++N +I
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE---IPKPNSFAWNTLIRA 104
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
Y+ ++ F M E K+ F L+ + L G LHG AV
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPF-----LIKAAAEVSSLSLGQSLHGMAVK 159
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
+ +D+ V NS + Y CG+++ A ++F + +D++SWN+M++G+ Q G + LEL
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ +M+ + VT++ VLS+CA + G +V IE+ N L NA+++MY +
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM--------------- 362
CG++ A+ +FD M +K V+WT A E+ + M
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 363 -----------------VRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP 405
++ ++ ++ V+ LSAC+ G + G + +K+G++
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRM 398
Query: 406 GPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIH 452
S L+ + + G L+++ ++ S++ K D VW A++G +H
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 329/575 (57%), Gaps = 34/575 (5%)
Query: 84 QLHAHVIRTG-SQPDPYTRSSLISMYSKCSLPF-----LARRVFDETHNLPIS---YNAM 134
Q+HA IR G S D LI + SLP A +VF + PI+ +N +
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLI--FYLVSLPSPPPMSYAHKVFSKIEK-PINVFIWNTL 91
Query: 135 ISGYSLNSMFADAVSLFRRMRR----EDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
I GY+ A SL+R MR E + T F +VT + V G
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR---------LGET 142
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+H + G + + V NS L +Y CG+V A ++FD+M +DL++WN++++G+A+NG
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
L LY EM + + PD T++++LS+CA +GA +G V + + G N +N
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS-GVRP 369
L+++YARCG + A+ +FD MVDK+ VSWT+ A+ELF M + G+ P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 370 DRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
FV +L ACSH G+ +G YF M +Y ++P EH+ C+VDLL RAG++K+A +
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 430 IKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNS 489
IKSM ++P+ +W LLGAC +H + +LAE A +++LEP + G YVLLSN+Y+ +
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 442
Query: 490 EGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL------E 543
V ++R M ++K PG S VE +VH F GD++HPQ IY K+ E+ E
Sbjct: 443 SDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSE 502
Query: 544 NSVMEIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHI 603
V +I + V EE N HSE++AIAF L+ST + IT++KNLRVC DCH+
Sbjct: 503 GYVPQI--SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 560
Query: 604 FMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+KLVSK+ NR+ ++RD +RFHHF++G CSC+DYW
Sbjct: 561 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
+ P AWN + ++ + +EAL+LY M +CA +
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSL 140
G ++H ++I+ G + ++ + L+ +Y++C A+ +FDE +S+ ++I G ++
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
N +A+ LF+ M +G + +T +G++ C+
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCE-----ITFVGILYACS 335
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/621 (37%), Positives = 332/621 (53%), Gaps = 12/621 (1%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P + +N + K Y E++ L+ M +S K+ L G
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
QLHA + TG D + ++ YSK R +FDE L +SYN +IS YS
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ ++ FR M+ + NF TML + + NL + L G LH A+ D+
Sbjct: 331 QYEASLHFFREMQ---CMGFDRRNFPFATMLSIAA--NLSS-LQMGRQLHCQALLATADS 384
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
L V NS + MY KC E A +F + R +SW A++SGY Q G L+L+ +M+
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ D T VL + A+ + ++G ++ I + G N F + L++MYA+CG++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
A VF+ M D++ VSW A A+ F +M+ SG++PD + VL+ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
H G ++G YF M YG+ P +HY+C++DLLGR GR EA L+ M +PD +W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 443 GALLGACKIHKNVELAELAFEHVIELEPT-NIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
++L AC+IHKN LAE A E + +E + YV +SNIY+ A E V V+ MRE
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 502 RKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV-MEIHRPDEKYRVR- 559
R ++K P S+VE K+HVF S D+ HP EI RK+ EL + E ++PD V+
Sbjct: 685 RGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQD 744
Query: 560 -SEEL-LNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFI 617
E++ + HSERLA+AFAL+ST G I +MKNLR C DCH +KL+SKIV R+
Sbjct: 745 VDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREIT 804
Query: 618 IRDATRFHHFRDGVCSCKDYW 638
+RD +RFHHF +GVCSC DYW
Sbjct: 805 VRDTSRFHHFSEGVCSCGDYW 825
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 210/469 (44%), Gaps = 25/469 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXX--XXXXXXXXXKSCAILSLPLT 81
P W + + ++ + EA L+R M RSS C ++P
Sbjct: 106 PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND-AVPQN 164
Query: 82 GF-QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPF--LARRVFDET-HNLPISYNAMISG 137
Q+HA ++ G +P+ S + + S C + LA +F+E +++N +I+G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
Y + ++ +++ LF +M R+ G F F+ V L V G + G LH +VT
Sbjct: 225 YEKDGLYTESIHLFLKM-RQSGHQPSDFTFSGV--LKAVVGL---HDFALGQQLHALSVT 278
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
G D +V N L Y K V R LFDEM D +S+N ++S Y+Q L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ EM+ +LS ANL + +G ++ + S + N+L++MYA+
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
C A +F + ++ VSWTA ++LF +M S +R D++ F TV
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATV 458
Query: 378 LSACSHAG--LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
L A + L K LH F + R L+ S LVD+ + G +K+A+ + + M
Sbjct: 459 LKASASFASLLLGKQLHAF--IIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEM-- 513
Query: 436 KPD--GAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
PD W AL+ A + + E A AF +IE L+P ++ +L+
Sbjct: 514 -PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 139/332 (41%), Gaps = 42/332 (12%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISG----- 137
++ A +I+TG D + ++ + AR+V+DE H +S N MISG
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 138 --------------------------YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVT 171
Y+ NS F +A LFR+M R S T+ + VT
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS-SSCTLP---DHVT 149
Query: 172 MLGLVSGCNLPNHLPTGTC--LHGCAVTFGLDAD--LAVMNSFLTMYVKCGEVELARQLF 227
L+ GCN + +P +H AV G D + L V N L Y + ++LA LF
Sbjct: 150 FTTLLPGCN--DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 228 DEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
+E+ +D +++N +++GY ++G + L+ +M+ P T VL + L
Sbjct: 208 EEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
+G ++ GF + + N +++ Y++ + R +FD M + VS+
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
++ F EM G F T+LS
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
K P T +W + ++ + L L+ M S+ K+ A + L
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYS 139
G QLHA +IR+G+ + ++ S L+ MY+KC A +VF+E + +S+NA+IS ++
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT-CLHGCAVTF 198
N A+ F +M E G +SV++LG+++ C+ + GT + +
Sbjct: 530 DNGDGEAAIGAFAKM-IESG-----LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSG---YAQNGHAARV 254
G+ L + + G A +L DEM D I W+++++ + A R
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643
Query: 255 LE-LYHEMKLR 264
E L+ KLR
Sbjct: 644 AEKLFSMEKLR 654
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 290 VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
V RK+ N TN +I+ + + G+++ AR +FD M D++VV+WT
Sbjct: 64 VSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARN 123
Query: 350 XXXXXAVELFDEMVRSG--VRPDRTVFVTVLSACSHA 384
A +LF +M RS PD F T+L C+ A
Sbjct: 124 SHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 328/567 (57%), Gaps = 19/567 (3%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSL 140
G ++HAH+I+T P Y R+ L+ Y KC AR+V DE +S+ AMIS YS
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
++A+++F M R DG N T +++ C + L G +HG V +
Sbjct: 131 TGHSSEALTVFAEMMRSDGKP------NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D+ + V +S L MY K G+++ AR++F+ + RD++S A+++GYAQ G LE++H
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
+ MSP+ VT ++L++ + L G + + + L N+LI+MY++CGN
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV-RSGVRPDRTVFVTVLS 379
L+ AR +FD M +++ +SW A +ELF M V+PD + VLS
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 380 ACSHAGLTDKGLHYFDEM-ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
CSH + D GL+ FD M +YG +PG EHY C+VD+LGRAGR+ EA + IK M KP
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
V G+LLGAC++H +V++ E +IE+EP N G YV+LSN+Y+ A V VR M
Sbjct: 425 AGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAM 484
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEK-- 555
M ++ + K+PG S+++++ +H F++ DR HP+ +E+ K+ E+ + + + PD
Sbjct: 485 MMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCV 544
Query: 556 -YRV---RSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKI 611
Y V + E++L G HSE+LA+ F L++T G I + KNLR+CVDCH F K+ SK+
Sbjct: 545 LYDVDEEQKEKMLLG---HSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKV 601
Query: 612 VNRQFIIRDATRFHHFRDGVCSCKDYW 638
R+ +RD RFH DG+CSC DYW
Sbjct: 602 FEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 16/308 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W + S+ EAL+++ M+RS SC S G
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYS 139
Q+H +++ + SSL+ MY+K AR +F+ LP +S A+I+GY+
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE---CLPERDVVSCTAIIAGYA 230
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ +A+ +F R+ E S ++L +SG L +H G H +
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNY---VTYASLLTALSGLALLDH---GKQAHCHVLRRE 284
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L + NS + MY KCG + AR+LFD M R ISWNAM+ GY+++G VLEL+
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 260 EMK-LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYA 316
M+ +R+ PD VTLLAVLS C++ + G+ + + +G+ P + +++M
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 317 RCGNLARA 324
R G + A
Sbjct: 405 RAGRIDEA 412
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK 334
A+L++C + A G V + + + +L L+ Y +C L AR V D M +K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 335 SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA-GL-TDKGLH 392
+VVSWTA A+ +F EM+RS +P+ F TVL++C A GL K +H
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 393 YFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIH 452
+ K+ S L+D+ +AG++KEA ++ + + + + + G ++
Sbjct: 177 ---GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 453 KNVELAELAFE-HVIELEPTNIGYYVLLSNI 482
+ E E+ H + P + Y LL+ +
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 325/564 (57%), Gaps = 23/564 (4%)
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMF 144
H +IR + D + LI+ YSKC LAR+VFD +S+N MI Y+ N M
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
++A+ +F MR E F F+ T+ ++S C + LH +V +D +L
Sbjct: 144 SEALDIFLEMRNEG------FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNL 197
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
V + L +Y KCG ++ A Q+F+ M + ++W++MV+GY QN + L LY +
Sbjct: 198 YVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
+ + TL +V+ +C+NL A + G ++ I + GFGSN F+ ++ ++MYA+CG+L +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 325 RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA 384
+F + +K++ W + LF++M + G+ P+ F ++LS C H
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 385 GLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGA 444
GL ++G +F M YGL P HYSC+VD+LGRAG L EA +LIKS+ P ++WG+
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGS 437
Query: 445 LLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
LL +C+++KN+ELAE+A E + ELEP N G +VLLSNIY+ K E + + R ++R+ +
Sbjct: 438 LLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 505 RKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI----HRPDEKYRV-- 558
+K G S+++ K KVH F G+ HP+++EI + L+N V++ ++P ++ +
Sbjct: 498 KKVRGKSWIDIKDKVHTFSVGESGHPRIREI---CSTLDNLVIKFRKFGYKPSVEHELHD 554
Query: 559 ----RSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
+ EELL HSE+LA+ F L+ + + IMKNLR+CVDCH FMK S R
Sbjct: 555 VEIGKKEELLMQ---HSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRR 611
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
I+RD RFHHF DG CSC D+W
Sbjct: 612 FIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 146/302 (48%), Gaps = 16/302 (5%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN + ++ R EAL ++ M +C + L +LH
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADA 147
++T + Y ++L+ +Y+KC + A +VF+ + +++++M++GY N + +A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ L+RR +R + N T+ ++ C+ L G +H G +++ V
Sbjct: 248 LLLYRRAQR------MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
+S + MY KCG + + +F E+ ++L WN ++SG+A++ V+ L+ +M+ M
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVER---KIEQCGFGSNPFLT--NALINMYARCGNLA 322
P+ VT ++LS C + G VE R K+ + +G +P + + ++++ R G L+
Sbjct: 362 PNEVTFSSLLSVCGHTGL----VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417
Query: 323 RA 324
A
Sbjct: 418 EA 419
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
+L CA GA + KI + + L N LIN Y++CG + AR VFDGM+++S
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC--SHAGLTDKGLHY 393
+VSW A+++F EM G + +VLSAC + L K LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHK 453
+ K + + L+DL + G +K+A+ + +SM+ K W +++ +K
Sbjct: 187 ---LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS-SVTWSSMVAGYVQNK 242
Query: 454 NVELAELAF 462
N E A L +
Sbjct: 243 NYEEALLLY 251
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+ W+ + + + Y+EAL LYR R S +C+ L+ + G Q+HA
Sbjct: 228 SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH--NLPISYNAMISGYSLNSMFA 145
+ ++G + + SS + MY+KC + +F E NL + +N +ISG++ ++
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPK 346
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC 179
+ + LF +M ++DG + N VT L+S C
Sbjct: 347 EVMILFEKM-QQDG-----MHPNEVTFSSLLSVC 374
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 327/581 (56%), Gaps = 27/581 (4%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-- 128
KSC + L LH V+++ S + L+ Y + A ++FDE +P
Sbjct: 42 KSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE---MPER 95
Query: 129 --ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
+S+N++ISGYS + RM S V F N VT L ++S C
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMM----ISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 187 TGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
G C+HG + FG+ ++ V+N+F+ Y K G++ + +LF+++ +++L+SWN M+ +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF 306
QNG A + L ++ + PD T LAVL SC ++G + + I GF N
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 307 LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
+T AL+++Y++ G L + VF + ++WTA A++ F+ MV G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
+ PD F +L+ACSH+GL ++G HYF+ M ++Y + P +HYSC+VDLLGR+G L++A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDA 486
LIK M ++P VWGALLGAC+++K+ +L A E + ELEP + YV+LSNIYS +
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 487 KNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV 546
+ R+R +M+++ L + GCSY+E+ K+H F GD +HP+ ++I +K+ E+ +
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 547 MEIHRPDEKYRVRSEELLNGNG---------VHSERLAIAFALLSTRPGTEITIMKNLRV 597
+ + Y+ ++E +L+ G HSE++A+AF LL P I I KNLR+
Sbjct: 512 ----KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRI 567
Query: 598 CVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
C DCH K +S I R+ IIRD+ RFHHF DG CSC DYW
Sbjct: 568 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 320/580 (55%), Gaps = 53/580 (9%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPI 129
K+C+ + G ++H + G + + L+SMY KC AR V DE + +
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+N+++ GY+ N F DA+ + R M +VK + ++ TM L LP
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREME------SVKISHDAGTMASL---------LP--- 249
Query: 190 CLHGCAVTFGLDADLAVMNSFL--TMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
AV N+ MYVK +F +M + L+SWN M+ Y +
Sbjct: 250 ---------------AVSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMK 286
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
N +ELY M+ PD V++ +VL +C + A +G ++ IE+ N L
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
NALI+MYA+CG L +AR VF+ M + VVSWTA AV LF ++ SG+
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
PD FVT L+ACSHAGL ++G F M Y + P EH +C+VDLLGRAG++KEA
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
I+ M ++P+ VWGALLGAC++H + ++ LA + + +L P GYYVLLSNIY+ A
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526
Query: 488 NSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVM 547
E V +R +M+ + L+K+PG S VE +H F GDR+HPQ EIYR++ L +
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Query: 548 EI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTE-----ITIMKNLRVC 598
E+ + PD + + V E+ VHSE+LAI FAL++T+ E I I KNLR+C
Sbjct: 587 ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRIC 646
Query: 599 VDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
DCH+ KL+S+I +R+ IIRD RFH FR GVCSC DYW
Sbjct: 647 GDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 214 YVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
Y +V AR++FDE+ R++I N M+ Y NG ++++ M + PD T
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
VL +C+ G V+G ++ + G S F+ N L++MY +CG L+ AR V D M
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
+ VVSW + A+E+ EM + D ++L A S+ T + + Y
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMY 261
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV---KPDGAVWGALLGAC- 449
+M K G + ++ ++ + + EA++L M+ +PD ++L AC
Sbjct: 262 VKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 450 ---------KIHKNVELAEL 460
KIH +E +L
Sbjct: 321 DTSALSLGKKIHGYIERKKL 340
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/623 (37%), Positives = 338/623 (54%), Gaps = 20/623 (3%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P +WN + + E L L+ M S +C +L
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G +HA+VI TG D +SL MY A ++F I S+ MISGY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N + A+ +R M ++ +VK + +T+ ++S C L TG LH A+ L
Sbjct: 376 NFLPDKAIDTYRMMDQD----SVKPD--EITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ + V N+ + MY KC ++ A +F + +++ISW ++++G N L +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
MK+ + P+ +TL A L++CA +GA + G E+ + + G G + FL NAL++MY RCG
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ A + F+ K V SW VELFD MV+S VRPD F+++L
Sbjct: 549 MNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CS + + +GL YF +ME YG+ P +HY+C+VDLLGRAG L+EA I+ M V PD A
Sbjct: 608 CSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
VWGALL AC+IH ++L EL+ +H+ EL+ ++GYY+LL N+Y+D V +VR MM+
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI-------YRKVAELENSVMEIHRPD 553
E L D GCS+VE KGKVH F S D+ HPQ KEI Y K++E+ + +
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSM 786
Query: 554 EKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVN 613
++ + +E+ G HSER AIAF L++T PG I + KNL +C +CH +K +SK V
Sbjct: 787 DETEISRDEIFCG---HSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVR 843
Query: 614 RQFIIRDATRFHHFRDGVCSCKD 636
R+ +RDA FHHF+DG CSC D
Sbjct: 844 REISVRDAEHFHHFKDGECSCGD 866
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 14/317 (4%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLR-SSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN+ + +KQ + EA+ LY ML ++C + G ++H H
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSMF 144
V+R G + D ++LI+MY KC AR +FD +P IS+NAMISGY N M
Sbjct: 222 VVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR---MPRRDIISWNAMISGYFENGMC 278
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
+ + LF MR + + + +T+ ++S C L G +H +T G D+
Sbjct: 279 HEGLELFFAMR------GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
+V NS MY+ G A +LF M +D++SW M+SGY N + ++ Y M
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
+ PD +T+ AVLS+CA LG GVE+ + + S + N LINMY++C + +A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 325 RAVFDGMVDKSVVSWTA 341
+F + K+V+SWT+
Sbjct: 453 LDIFHNIPRKNVISWTS 469
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 136/263 (51%), Gaps = 5/263 (1%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
S+N ++ GY+ F +A+ L+ RM G + F V + C L G
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV-----LRTCGGIPDLARG 215
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+H V +G + D+ V+N+ +TMYVKCG+V+ AR LFD M RD+ISWNAM+SGY +N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G LEL+ M+ + PD +TL +V+S+C LG + +G ++ + GF + +
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N+L MY G+ A +F M K +VSWT A++ + M + V+
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 369 PDRTVFVTVLSACSHAGLTDKGL 391
PD VLSAC+ G D G+
Sbjct: 396 PDEITVAAVLSACATLGDLDTGV 418
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
+ G N +A+ L M+ ++ + + LV C G+ ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQE------LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSI 119
Query: 195 AVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARV 254
A++ + + N+FL M+V+ G + A +F +M R+L SWN +V GYA+ G+
Sbjct: 120 ALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEA 179
Query: 255 LELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
+ LYH M + + PD T VL +C + G EV + + G+ + + NALI
Sbjct: 180 MCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALIT 239
Query: 314 MYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
MY +CG++ AR +FD M + ++SW A +ELF M V PD
Sbjct: 240 MYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 374 FVTVLSACSHAG 385
+V+SAC G
Sbjct: 300 LTSVISACELLG 311
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 337/627 (53%), Gaps = 18/627 (2%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
K+ P +WN + + +AL L M+ S +C
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMIS 136
G LH V+ +G + ++L+SMY K +RRV + +P +++NA+I
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ---MPRRDVVAWNALIG 436
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHL-PTGTCLHGCA 195
GY+ + A++ F+ MR E SS N +T++ ++S C LP L G LH
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSS------NYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
V+ G ++D V NS +TMY KCG++ ++ LF+ + R++I+WNAM++ A +GH VL
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 550
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+L +M+ +S D + LS+ A L G ++ + GF + F+ NA +MY
Sbjct: 551 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 610
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
++CG + + V++S+ SW F EM+ G++P FV
Sbjct: 611 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 670
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
++L+ACSH GL DKGL Y+D + R +GL+P EH C++DLLGR+GRL EA I M +
Sbjct: 671 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 730
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRV 495
KP+ VW +LL +CKIH N++ A E++ +LEP + YVL SN+++ E V V
Sbjct: 731 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENV 790
Query: 496 RVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME---IHRP 552
R M + ++K CS+V+ K KV F GDR HPQ EIY K+ +++ + E +
Sbjct: 791 RKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADT 850
Query: 553 DEKYRVRSEELLNGN-GVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKI 611
+ + EE N HSERLA+A+AL+ST G+ + I KNLR+C DCH K VS++
Sbjct: 851 SQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRV 910
Query: 612 VNRQFIIRDATRFHHFRDGVCSCKDYW 638
+ R+ ++RD RFHHF G+CSCKDYW
Sbjct: 911 IGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/564 (24%), Positives = 242/564 (42%), Gaps = 35/564 (6%)
Query: 16 GSGEPKRH-----PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXX 70
G +P RH PV +WN + + + Y E + +R M
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 71 KSCA-ILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI 129
+C S+ G Q+H V ++G D Y ++++ +Y L +R+VF+E + +
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 130 -SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
S+ +++ GYS + + +++ MR E V N NS++++ +S C L G
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEG----VGCNENSMSLV--ISSCGLLKDESLG 179
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+ G V GL++ LAV NS ++M G V+ A +FD+M RD ISWN++ + YAQN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
GH ++ M+ + T+ +LS ++ Q G + + + GF S +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N L+ MYA G A VF M K ++SW + A+ L M+ SG
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 369 PDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
+ F + L+AC +KG LH + GL + LV + G+ G + E+
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVS---GLFYNQIIGNALVSMYGKIGEMSES 416
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDA 486
++ M + D W AL+G ++ + A AF+ + +E + Y ++S
Sbjct: 417 RRVLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQ-TMRVEGVSSNYITVVS------ 468
Query: 487 KNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV 546
VL ++ + R P +Y+ G F S + + +Y K +L +S
Sbjct: 469 -----VLSACLLPGDLLERGKPLHAYIVSAG----FESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 547 MEIHRPDEKYRVRSEELLNGNGVH 570
+ D + + +L N H
Sbjct: 520 DLFNGLDNRNIITWNAMLAANAHH 543
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 3/245 (1%)
Query: 213 MYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVT 272
MY K G V+ AR LFD M VR+ +SWN M+SG + G +E + +M + P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 273 LLAVLSSCANLGAQV-VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM 331
+ +++++C G+ GV+V + + G S+ +++ A++++Y G ++ +R VF+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 332 VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
D++VVSWT+ ++++ M GV + V+S+C G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKI 451
++ K GL+ + L+ +LG G + A + M + D W ++ A
Sbjct: 181 QIIGQV-VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQ 238
Query: 452 HKNVE 456
+ ++E
Sbjct: 239 NGHIE 243
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 326/556 (58%), Gaps = 16/556 (2%)
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFAD 146
H+ G +P + + LI+MY K +L A ++FD+ IS+ MIS YS +
Sbjct: 86 HLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK 145
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A+ L M R++ V + ++SV + CN + LH + GL++D+ V
Sbjct: 146 ALELLVLMLRDNVRPNV-YTYSSV-----LRSCN---GMSDVRMLHCGIIKEGLESDVFV 196
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
++ + ++ K GE E A +FDEM+ D I WN+++ G+AQN + LEL+ MK
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
+ TL +VL +C L +G++ I + + + L NAL++MY +CG+L A
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALR 314
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
VF+ M ++ V++W+ A++LF+ M SG +P+ V VL ACSHAGL
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ G +YF M++ YG+ P EHY C++DLLG+AG+L +A+ L+ M+ +PD W LL
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
GAC++ +N+ LAE A + VI L+P + G Y LLSNIY++++ + V +R MR+R ++K
Sbjct: 435 GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 507 DPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVRS---EE 562
+PGCS++E ++H F GD +HPQ+ E+ +K+ +L + + I + P+ + ++ E+
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQ 554
Query: 563 LLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDAT 622
+ + HSE+LA+AF L++ I I KNLR+C DCH+F KL SK+ R +IRD
Sbjct: 555 MEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPI 614
Query: 623 RFHHFRDGVCSCKDYW 638
R+HHF+DG CSC DYW
Sbjct: 615 RYHHFQDGKCSCGDYW 630
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 159/320 (49%), Gaps = 16/320 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W + SK + +++AL L MLR + +SC +S
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS---DVR 179
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
LH +I+ G + D + RS+LI +++K P A VFDE I +N++I G++ NS
Sbjct: 180 MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
A+ LF+RM+R F T+ ++ C L G H V + D
Sbjct: 240 RSDVALELFKRMKR------AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQ 291
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
DL + N+ + MY KCG +E A ++F++M RD+I+W+ M+SG AQNG++ L+L+ MK
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGN 320
P+ +T++ VL +C++ G G R +++ +G +P + +I++ + G
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL-YGIDPVREHYGCMIDLLGKAGK 410
Query: 321 LARARAVFDGM-VDKSVVSW 339
L A + + M + V+W
Sbjct: 411 LDDAVKLLNEMECEPDAVTW 430
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/576 (38%), Positives = 322/576 (55%), Gaps = 34/576 (5%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLI--SMYSKCSLPFLAR------RVFDETHNLPISY-NAM 134
Q+HA ++RT R+S + S+ +L + R RVF + N +S+ N M
Sbjct: 29 QIHALLLRT-----SLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTM 83
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
I +SL+ + LFR +RR N ++ + C L G +HG
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPA-----NPLSSSFALKCCIKSGDLLGGLQIHGK 138
Query: 195 AVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARV 254
+ G +D +M + + +Y C A ++FDE+ RD +SWN + S Y +N V
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 255 LELYHEMKLRR---MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
L L+ +MK + PD VT L L +CANLGA G +V I++ G L+N L
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
++MY+RCG++ +A VF GM +++VVSWTA A+E F+EM++ G+ P+
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMER-KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+LSACSH+GL +G+ +FD M ++ ++P HY C+VDLLGRA L +A LI
Sbjct: 319 QTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSE 490
KSM++KPD +W LLGAC++H +VEL E H+IEL+ G YVLL N YS E
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWE 438
Query: 491 GVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENS----- 545
V +R +M+E+++ PGCS +E +G VH F D +HP+ +EIY+ +AE+
Sbjct: 439 KVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Query: 546 -VMEIHRPDEKYRVRSEELLNGNGV--HSERLAIAFALLSTRPGTEITIMKNLRVCVDCH 602
V EI E + + SEE G + HSE+LAIAF +L T PGT I + KNLR CVDCH
Sbjct: 499 YVAEI--TSELHNLESEE-EKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCH 555
Query: 603 IFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
F K VS + +R I+RD +RFHHF+ G CSC D+W
Sbjct: 556 NFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 175/417 (41%), Gaps = 44/417 (10%)
Query: 25 VNPTTA-WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTG- 82
+NPT + N + S + E L+R + R+S C I S L G
Sbjct: 73 LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGG 132
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLN 141
Q+H + G D ++L+ +YS C A +VFDE +S+N + S Y N
Sbjct: 133 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN 192
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
D + LF +M + D VK + VT L + C L G +H GL
Sbjct: 193 KRTRDVLVLFDKM-KNDVDGCVK--PDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
L + N+ ++MY +CG ++ A Q+F M R+++SW A++SG A NG +E ++EM
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCG 319
+SP+ TL +LS+C++ G G+ ++ F P L + ++++ R
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
L +A ++ M EM +PD T++ T+L
Sbjct: 370 LLDKAYSLIKSM-----------------------------EM-----KPDSTIWRTLLG 395
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
AC G + G + + G Y L++ G+ ++ +L MK K
Sbjct: 396 ACRVHGDVELGERVISHLIELKAEEAGD--YVLLLNTYSTVGKWEKVTELRSLMKEK 450
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 326/564 (57%), Gaps = 20/564 (3%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH-NLPISYNAMISGYSLNSM 143
++ ++++ G + R+ LI +Y+KC AR VF+ +S+N++ISGY +
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 388
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+A+ LF+ M ++ + +T L L+S L G LH + G+ D
Sbjct: 389 LMEAMKLFKMMM------IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
L+V N+ + MY KCGEV + ++F M D ++WN ++S + G A L++ +M+
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+ PD T L L CA+L A+ +G E+ + + G+ S + NALI MY++CG L
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
+ VF+ M + VV+WT A+E F +M +SG+ PD VF+ ++ ACSH
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSH 622
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
+GL D+GL F++M+ Y + P EHY+C+VDLL R+ ++ +A + I++M +KPD ++W
Sbjct: 623 SGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWA 682
Query: 444 ALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERK 503
++L AC+ ++E AE +IEL P + GY +L SN Y+ + + V +R ++++
Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKH 742
Query: 504 LRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVM--EIHRPDEK------ 555
+ K+PG S++E VHVF SGD + PQ + IY+ + E+ S+M E + PD +
Sbjct: 743 ITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSL-EILYSLMAKEGYIPDPREVSQNL 801
Query: 556 -YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
L+ G HSERLAIAF LL+T PGT + +MKNLRVC DCH KL+SKIV R
Sbjct: 802 EEEEEKRRLICG---HSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGR 858
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
+ ++RDA RFH F+DG CSCKD W
Sbjct: 859 EILVRDANRFHLFKDGTCSCKDRW 882
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 204/434 (47%), Gaps = 24/434 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P WN + SK + EAL Y + S K+CA L G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYS 139
++ ++ G + D + ++L+ MYS+ L AR+VFDE +P +S+N++ISGYS
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE---MPVRDLVSWNSLISGYS 183
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ + +A+ ++ ++ S V +F ++L + + G LHG A+ G
Sbjct: 184 SHGYYEEALEIYHELK---NSWIVPDSFTVSSVLPAFGNLLV---VKQGQGLHGFALKSG 237
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+++ + V N + MY+K AR++FDEM VRD +S+N M+ GY + + ++
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFL 297
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
E L + PD +T+ +VL +C +L + + + + GF + N LI++YA+CG
Sbjct: 298 E-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG 356
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
++ AR VF+ M K VSW + A++LF M+ + D ++ ++S
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 380 ACSHAGLTD----KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
+ L D KGLH K G+ + L+D+ + G + +++ + SM
Sbjct: 417 VSTR--LADLKFGKGLH---SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 436 KPDGAVWGALLGAC 449
D W ++ AC
Sbjct: 472 G-DTVTWNTVISAC 484
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 193/451 (42%), Gaps = 13/451 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +WN + S Y+EAL +Y + S + L + G
Sbjct: 168 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH-NLPISYNAMISGYSLNS 142
LH +++G + L++MY K P ARRVFDE +SYN MI GY
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
M ++V +F + +F + +T+ ++ C L ++ + G
Sbjct: 288 MVEESVRMFLE-------NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
+ V N + +Y KCG++ AR +F+ M +D +SWN+++SGY Q+G ++L+ M
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ D +T L ++S L G + + G + ++NALI+MYA+CG +
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
+ +F M V+W +++ +M +S V PD F+ L C+
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
G + R +G + + + L+++ + G L+ + + + M + D W
Sbjct: 521 SLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTW 578
Query: 443 GALLGACKIHKNVELAELAFEHVIELEPTNI 473
++ A ++ E A E ++E + I
Sbjct: 579 TGMIYAYGMYGE---GEKALETFADMEKSGI 606
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 179/398 (44%), Gaps = 23/398 (5%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISY--NAMISGYSLN 141
++HA VI G + LI YS P + VF Y N++I +S N
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+F +A+ + ++R E S K+ F SV + C G ++ + G +
Sbjct: 85 GLFPEALEFYGKLR-ESKVSPDKYTFPSV-----IKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+DL V N+ + MY + G + ARQ+FDEM VRDL+SWN+++SGY+ +G+ LE+YHE+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
K + PD T+ +VL + NL G + + G S + N L+ MY +
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
AR VFD M + VS+ +V +F E + +PD +VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRAC 317
Query: 382 SHAGLTDKGL-HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
H L D L Y K G + L+D+ + G + A D+ SM+ K D
Sbjct: 318 GH--LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTV 374
Query: 441 VW----------GALLGACKIHKNVELAELAFEHVIEL 468
W G L+ A K+ K + + E +H+ L
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/691 (32%), Positives = 353/691 (51%), Gaps = 87/691 (12%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P + +W ++ QY +A+ + M++ S A TG
Sbjct: 107 PQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGK 166
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS------------- 130
++H+ +++ G + + +SL++MY+KC P +A+ VFD IS
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 131 -------------------YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVT 171
+N+MISG++ A+ +F +M R+ S +F SV
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV- 285
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDE-- 229
+S C L G +H VT G D V+N+ ++MY +CG VE AR+L ++
Sbjct: 286 ----LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 230 -------------------------------MLVRDLISWNAMVSGYAQNGHAARVLELY 258
+ RD+++W AM+ GY Q+G + L+
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
M P+ TL A+LS ++L + G ++ + G + ++NALI MYA+
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 319 GNLARARAVFDGM-VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
GN+ A FD + ++ VSWT+ A+ELF+ M+ G+RPD +V V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
SAC+HAGL ++G YFD M+ + P HY+C+VDL GRAG L+EA + I+ M ++P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
D WG+LL AC++HKN++L ++A E ++ LEP N G Y L+N+YS E ++R
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 498 MMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY----------RKVAELENSVM 547
M++ +++K+ G S++E K KVHVF D HP+ EIY +K+ + ++
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701
Query: 548 EIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKL 607
+H +E+ + E++L HSE+LAIAF L+ST T + IMKNLRVC DCH +K
Sbjct: 702 VLHDLEEEVK---EQILRH---HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKF 755
Query: 608 VSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+SK+V R+ I+RD TRFHHF+DG CSC+DYW
Sbjct: 756 ISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 207/498 (41%), Gaps = 102/498 (20%)
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI----SYNAMI 135
T +H VI++G Y ++L+++YSK AR++FDE +P+ S+N ++
Sbjct: 31 FTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE---MPLRTAFSWNTVL 87
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSS--TVKFNFNSV----------------------- 170
S YS F ++ + D S T+ + ++
Sbjct: 88 SAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
T+ +++ + TG +H V GL +++V NS L MY KCG+ +A+ +FD M
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 231 LVRDLISWNAMV-------------------------------SGYAQNGHAARVLELYH 259
+VRD+ SWNAM+ SG+ Q G+ R L+++
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 260 EMKLRR--MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+M LR +SPD TL +VLS+CANL +G ++ I GF + + NALI+MY+R
Sbjct: 268 KM-LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 318 CGNLARAR-----------------AVFDGMV----------------DKSVVSWTAXXX 344
CG + AR A+ DG + D+ VV+WTA
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A+ LF MV G RP+ +LS S G K G
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS-AVKSGEI 445
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
+ L+ + +AG + A ++ + D W +++ A H + E A FE
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 465 VI--ELEPTNIGYYVLLS 480
++ L P +I Y + S
Sbjct: 506 MLMEGLRPDHITYVGVFS 523
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 11/274 (4%)
Query: 139 SLNSMFADAVSLFRR-MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHL-----PTGTCLH 192
SL+++ +L ++ + + +G T + V GL+ L N+L TG LH
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 193 GCAVTFGLDADLAV-MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
+ + A N+ L+ Y K G+++ + FD++ RD +SW M+ GY G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
+ + + +M + P TL VL+S A G +V I + G N ++N+L
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
+NMYA+CG+ A+ VFD MV + + SW A A+ F++M D
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DI 243
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP 405
+ +++S + G + L F +M R L P
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/567 (37%), Positives = 325/567 (57%), Gaps = 16/567 (2%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-I 129
K C + L + G +HAH++++ + D ++L++MY+KC AR+VF++ +
Sbjct: 68 KKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFV 127
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVS--GCNLPNHLPT 187
++ +ISGYS + DA+ F +M R G S +F +SV GC
Sbjct: 128 TWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGC-------C 179
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
G LHG V G D+++ V ++ L +Y + G ++ A+ +FD + R+ +SWNA+++G+A+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
+ LEL+ M P + ++ +C++ G G V + + G F
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
N L++MYA+ G++ AR +FD + + VVSW + AV F+EM R G+
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
RP+ F++VL+ACSH+GL D+G HY+ E+ +K G+ P HY +VDLLGRAG L A+
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
I+ M ++P A+W ALL AC++HKN EL A EHV EL+P + G +V+L NIY+
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 488 NSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVM 547
RVR M+E ++K+P CS+VE + +H+F + D HPQ +EI RK E+ +
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Query: 548 EI-HRPDEKY---RVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHI 603
E+ + PD + V +E HSE++A+AFALL+T PG+ I I KN+RVC DCH
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598
Query: 604 FMKLVSKIVNRQFIIRDATRFHHFRDG 630
+KL SK+V R+ I+RD RFHHF+D
Sbjct: 599 AIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 151/312 (48%), Gaps = 12/312 (3%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
L+ C + L G +H + D+ + N+ L MY KCG +E AR++F++M RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER 294
++W ++SGY+Q+ L +++M SP+ TL +V+ + A G ++
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+CGF SN + +AL+++Y R G + A+ VFD + ++ VSW A
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYS--- 411
A+ELF M+R G RP + ++ ACS G ++G + Y ++ G + +
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-----KWVHAYMIKSGEKLVAFAG 300
Query: 412 -CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV--IEL 468
L+D+ ++G + +A + + K D W +LL A H + A FE + + +
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 469 EPTNIGYYVLLS 480
P I + +L+
Sbjct: 360 RPNEISFLSVLT 371
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 45/416 (10%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
++ P W + S+ + +AL + MLR K+ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGY 138
G QLH ++ G + + S+L+ +Y++ L A+ VFD E+ N +S+NA+I+G+
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN-DVSWNALIAGH 237
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ S A+ LF+ M R DG F++ S L C+ L G +H +
Sbjct: 238 ARRSGTEKALELFQGMLR-DGFRPSHFSYAS-----LFGACSSTGFLEQGKWVHAYMIKS 291
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G N+ L MY K G + AR++FD + RD++SWN++++ YAQ+G + +
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
EM+ + P+ ++ L+VL++C++ G G +++ G + ++++ R
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G+L R A+ +EM + P ++ +L
Sbjct: 412 GDLNR-------------------------------ALRFIEEM---PIEPTAAIWKALL 437
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
+AC T+ G + + + PGP + L ++ GR +A + K MK
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGP--HVILYNIYASGGRWNDAARVRKKMK 491
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 122/280 (43%), Gaps = 11/280 (3%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN + +++ ++AL L++ MLR +C+ G +HA+
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADA 147
+I++G + + ++L+ MY+K AR++FD +S+N++++ Y+ + +A
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
V F MRR V N ++ L +++ C+ L G + G+ +
Sbjct: 348 VWWFEEMRR------VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLIS-WNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+ + + + G++ A + +EM + + W A+++ A H L Y + +
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN--ACRMHKNTELGAYAAEHVFEL 459
Query: 267 SP-DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
P DP + + + A+ G V +K+++ G P
Sbjct: 460 DPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 499
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/615 (33%), Positives = 337/615 (54%), Gaps = 13/615 (2%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT-GFQLHAH 88
+WN + +++ EA+ L+ +LR K+ + L L+ Q+H H
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADA 147
I+ + D + ++LI YS+ A +F E HN +++NAM++GY+ +
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ LF M ++ S + T+ + C + G +H A+ G D DL V
Sbjct: 502 LKLFALMHKQGERS------DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
+ L MYVKCG++ A+ FD + V D ++W M+SG +NG R ++ +M+L +
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
PD T+ + + + L A G ++ + ++PF+ +L++MYA+CG++ A +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
F + ++ +W A ++LF +M G++PD+ F+ VLSACSH+GL
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
+ + M YG++P EHYSCL D LGRAG +K+A +LI+SM ++ +++ LL
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
AC++ + E + ++ELEP + YVLLSN+Y+ A + + R MM+ K++KD
Sbjct: 796 ACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Query: 508 PGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV-MEIHRPDEKYR---VRSEEL 563
PG S++E K K+H+F DR++ Q + IYRKV ++ + E + P+ + V EE
Sbjct: 856 PGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEK 915
Query: 564 LNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATR 623
HSE+LA+AF LLST P T I ++KNLRVC DCH MK ++K+ NR+ ++RDA R
Sbjct: 916 ERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANR 975
Query: 624 FHHFRDGVCSCKDYW 638
FH F+DG+CSC DYW
Sbjct: 976 FHRFKDGICSCGDYW 990
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 197/470 (41%), Gaps = 11/470 (2%)
Query: 32 NLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIR 91
N L E QY L + M+ S + + G Q+H ++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 92 TGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSL 150
G +SLI+MY K AR VFD IS+N++I+G + N + +AV L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
F ++ R G ++ SV L + +LP L +H A+ +D V +
Sbjct: 404 FMQLLR-CGLKPDQYTMTSV----LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 211 LTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDP 270
+ Y + ++ A LF+ DL++WNAM++GY Q+ + L+L+ M + D
Sbjct: 459 IDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 271 VTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDG 330
TL V +C L A G +V + G+ + ++++ +++MY +CG+++ A+ FD
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 331 MVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKG 390
+ V+WT A +F +M GV PD T+ A S ++G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 391 LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACK 450
K P + LVD+ + G + +A L K +++ A W A+L
Sbjct: 638 -RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLA 695
Query: 451 IHKNVELAELAFEHV--IELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
H + F+ + + ++P + + +LS SE +R M
Sbjct: 696 QHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSM- 143
HA ++ P+ + ++LISMYSKC ARRVFD+ + +S+N++++ Y+ +S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 144 ----FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
A LFR +R +D T + + + L L SG ++ HG A G
Sbjct: 122 VVENIQQAFLLFRILR-QDVVYTSRMTLSPMLKLCLHSG-----YVWASESFHGYACKIG 175
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
LD D V + + +Y+K G+V+ + LF+EM RD++ WN M+ Y + G ++L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 260 EMKLRRMSPDPVTL 273
++P+ +TL
Sbjct: 236 AFHSSGLNPNEITL 249
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV 232
G + + L G C H +TF + + ++N+ ++MY KCG + AR++FD+M
Sbjct: 43 FGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 233 RDLISWNAMVSGYAQNGHAA-----RVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
RDL+SWN++++ YAQ+ + L+ ++ + +TL +L C + G
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
+ G + F+ AL+N+Y + G + + +F+ M + VV W
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 348 XXXXXXXAVELFDEMVRSGVRPDR 371
A++L SG+ P+
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNE 246
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 39/299 (13%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSM 143
H + + G D + +L+++Y K + +F+E + + +N M+ Y
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+A+ L SS F+S SG N PN + L A G D+D
Sbjct: 227 KEEAIDL---------SSA----FHS-------SGLN-PNEIT----LRLLARISGDDSD 261
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ SF G D V ++I N +S Y +G + +L+ + +M
Sbjct: 262 AGQVKSFAN-----GN--------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+ D VT + +L++ + + +G +V + G ++N+LINMY +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
AR VFD M ++ ++SW + AV LF +++R G++PD+ +VL A S
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/600 (35%), Positives = 329/600 (54%), Gaps = 11/600 (1%)
Query: 44 YKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSS 103
+ E L L+ + + K+C S G LH+ V++ G D +S
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 104 LISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVSLFRRMRREDGSST 162
L+S+YS A ++FDE + + ++ A+ SGY+ + +A+ LF++M E G
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV-EMGVKP 210
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
+S ++ ++S C L +G + + + V + + +Y KCG++E
Sbjct: 211 -----DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
AR +FD M+ +D+++W+ M+ GYA N +EL+ +M + PD +++ LSSCA+
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCAS 325
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAX 342
LGA +G I++ F +N F+ NALI+MYA+CG +AR VF M +K +V A
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAA 385
Query: 343 XXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYG 402
+ +F + + G+ PD + F+ +L C HAGL GL +F+ + Y
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA 445
Query: 403 LQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
L+ EHY C+VDL GRAG L +A LI M ++P+ VWGALL C++ K+ +LAE
Sbjct: 446 LKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVL 505
Query: 463 EHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVF 522
+ +I LEP N G YV LSNIYS + VR MM ++ ++K PG S++E +GKVH F
Sbjct: 506 KELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEF 565
Query: 523 YSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEK---YRVRSEELLNGNGVHSERLAIAF 578
+ D++HP +IY K+ +L N + + P + + V EE G HSE+LA+A
Sbjct: 566 LADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVAL 625
Query: 579 ALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
L+ST G I ++KNLRVC DCH MKL+SKI R+ ++RD RFH F +G CSC DYW
Sbjct: 626 GLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 166/332 (50%), Gaps = 8/332 (2%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
YN++I+G+ N +F + + LF +R+ G F F V + C + G
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKH-GLYLHGFTFPLV-----LKACTRASSRKLGID 132
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
LH V G + D+A M S L++Y G + A +LFDE+ R +++W A+ SGY +G
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
++L+ +M + PD ++ VLS+C ++G G + + +E+ N F+
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
L+N+YA+CG + +AR+VFD MV+K +V+W+ +ELF +M++ ++PD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+ V LS+C+ G D G ++R L + L+D+ + G + ++
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFL-TNLFMANALIDMYAKCGAMARGFEVF 371
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
K MK K D + A + + +V+L+ F
Sbjct: 372 KEMKEK-DIVIMNAAISGLAKNGHVKLSFAVF 402
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 11/275 (4%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
L+S NHL +H + L D ++N L + + + + LF +
Sbjct: 19 LISVACTVNHLKQ---IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPN 75
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER 294
+ +N++++G+ N L+L+ ++ + T VL +C ++ +G+++
Sbjct: 76 IFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHS 135
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+ +CGF + +L+++Y+ G L A +FD + D+SVV+WTA
Sbjct: 136 LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHRE 195
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKG---LHYFDEMERKYGLQPGPEHYS 411
A++LF +MV GV+PD V VLSAC H G D G + Y +EME +Q +
Sbjct: 196 AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME----MQKNSFVRT 251
Query: 412 CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
LV+L + G++++A + SM V+ D W ++
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/648 (33%), Positives = 346/648 (53%), Gaps = 46/648 (7%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAH 88
+W + +++ K+A+ L+ M+R +CA L TG +++A
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLNSMFAD 146
+ +G + + S+L+ MY KC+ +A+R+FDE NL + NAM S Y + +
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTRE 320
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A+ +F M S V+ + ++ML +S C+ ++ G HG + G ++ +
Sbjct: 321 ALGVFNLMM----DSGVRPD--RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
N+ + MY+KC + A ++FD M + +++WN++V+GY +NG E + M + +
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 267 --------------------------------SPDPVTLLAVLSSCANLGAQVVGVEVER 294
+ D VT++++ S+C +LGA + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
IE+ G + L L++M++RCG+ A ++F+ + ++ V +WTA
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
A+ELFD+M+ G++PD FV L+ACSH GL +G F M + +G+ P HY C+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
DLLGRAG L+EA+ LI+ M ++P+ +W +LL AC++ NVE+A A E + L P G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 475 YYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKE 534
YVLLSN+Y+ A + +VR+ M+E+ LRK PG S ++ +GK H F SGD +HP+M
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 535 IYRKVAELENSVMEI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEIT 590
I + E+ + H PD V +E + HSE+LA+A+ L+S+ GT I
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIR 794
Query: 591 IMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
I+KNLRVC DCH F K SK+ NR+ I+RD RFH+ R G CSC D+W
Sbjct: 795 IVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 218/467 (46%), Gaps = 46/467 (9%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
EA+ L+ M+ S +CA G Q+H +++ G D + ++SL+
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 106 SMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
Y++C AR+VFDE + +S+ +MI GY+ DAV LF RM R++ +
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE-----E 231
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
NSVTM+ ++S C L TG ++ G++ + ++++ + MY+KC +++A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 225 QLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
+LFDE +L NAM S Y + G L +++ M + PD +++L+ +SSC+ L
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
+ G + + GF S + NALI+MY +C A +FD M +K+VV+W +
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 345 XXXXXXXXXXAVELFDEM--------------------------------VRSGVRPDRT 372
A E F+ M + GV D
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 373 VFVTVLSACSHAGLTD--KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+++ SAC H G D K ++Y+ E K G+Q + LVD+ R G + AM +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIE---KNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGY 475
S+ + D + W A +GA + N E A F+ +IE L+P + +
Sbjct: 529 NSLTNR-DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 190/396 (47%), Gaps = 28/396 (7%)
Query: 85 LHAHVIRTGSQPDPYTRSSLIS----MYSKCSLPFLARRVFD--ETHNLPISYNAMISGY 138
H + + G D T + L++ + ++ SL F A+ VF+ E++ YN++I GY
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF-AKEVFENSESYGTCFMYNSLIRGY 109
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ + + +A+ LF RM G S K+ F GL S C G +HG V
Sbjct: 110 ASSGLCNEAILLFLRMMNS-GISPDKYTFP----FGL-SACAKSRAKGNGIQIHGLIVKM 163
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G DL V NS + Y +CGE++ AR++FDEM R+++SW +M+ GYA+ A ++L+
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 259 HEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
M + ++P+ VT++ V+S+CA L G +V I G N + +AL++MY +
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
C + A+ +FD ++ A A+ +F+ M+ SGVRPDR ++
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 378 LSACSHAG--LTDKGLHYFDEMERKYGLQPGPEHY----SCLVDLLGRAGRLKEAMDLIK 431
+S+CS L K H Y L+ G E + + L+D+ + R A +
Sbjct: 344 ISSCSQLRNILWGKSCH-------GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 432 SMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
M K W +++ + V+ A FE + E
Sbjct: 397 RMSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPE 431
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/458 (41%), Positives = 283/458 (61%), Gaps = 9/458 (1%)
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
G +H + G + + V NS L +Y CG+V A ++FD+M +DL++WN++++G+A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
NG L LY EM + + PD T++++LS+CA +GA +G V + + G N
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS-G 366
+N L+++YARCG + A+ +FD MVDK+ VSWT+ A+ELF M + G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
+ P FV +L ACSH G+ +G YF M +Y ++P EH+ C+VDLL RAG++K+A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDA 486
+ IKSM ++P+ +W LLGAC +H + +LAE A +++LEP + G YVLLSN+Y+
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 487 KNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL---- 542
+ V ++R M ++K PG S VE +VH F GD++HPQ IY K+ E+
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 543 --ENSVMEIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVD 600
E V +I + V EE N HSE++AIAF L+ST + IT++KNLRVC D
Sbjct: 367 RSEGYVPQI--SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 424
Query: 601 CHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
CH+ +KLVSK+ NR+ ++RD +RFHHF++G CSC+DYW
Sbjct: 425 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
+G + + + GFGS ++ N+L+++YA CG++A A VFD M +K +V+W +
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A+ L+ EM G++PD V++LSAC+ G G M K GL
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNL 124
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ L+DL R GR++EA L M V + W +L+
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
+ P AWN + ++ + +EAL+LY M +CA +
Sbjct: 48 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 107
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSL 140
G ++H ++I+ G + ++ + L+ +Y++C A+ +FDE +S+ ++I G ++
Sbjct: 108 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 167
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
N +A+ LF+ M +G + +T +G++ C+
Sbjct: 168 NGFGKEAIELFKYMESTEGLLPCE-----ITFVGILYACS 202
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 313/547 (57%), Gaps = 19/547 (3%)
Query: 97 DPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVSLFRRMR 155
D + +++I+ Y++ AR++FDE+ + ++ AM+SGY N M +A LF +M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 156 REDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYV 215
N V+ +++G + L +++ N+ +T Y
Sbjct: 309 ER----------NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYA 354
Query: 216 KCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLA 275
+CG++ A+ LFD+M RD +SW AM++GY+Q+GH+ L L+ +M+ + + +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
LS+CA++ A +G ++ ++ + G+ + F+ NAL+ MY +CG++ A +F M K
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+VSW A+ F+ M R G++PD V VLSACSH GL DKG YF
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNV 455
M + YG+ P +HY+C+VDLLGRAG L++A +L+K+M +PD A+WG LLGA ++H N
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEY 515
ELAE A + + +EP N G YVLLSN+Y+ + V ++RV MR++ ++K PG S++E
Sbjct: 595 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEI 654
Query: 516 KGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEK----YRVRSEELLNGNGVHS 571
+ K H F GD HP+ EI+ + EL+ + + + + V EE HS
Sbjct: 655 QNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHS 714
Query: 572 ERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGV 631
ERLA+A+ ++ G I ++KNLRVC DCH +K +++I R I+RD RFHHF+DG
Sbjct: 715 ERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGS 774
Query: 632 CSCKDYW 638
CSC DYW
Sbjct: 775 CSCGDYW 781
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 178/456 (39%), Gaps = 88/456 (19%)
Query: 105 ISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
IS Y + A RVF +SYN MISGY N F A LF M D V
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERD---LV 127
Query: 164 KFNFNSVTMLGLVSGCNLP-----------------NHLPTGTCLHGCA----------- 195
+N V + G V NL N + +G +GC
Sbjct: 128 SWN---VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 196 ------------------------VTFGLDADLAVM--NSFLTMYVKCGEVELARQLFDE 229
+ F + A++ N L +VK ++ ARQ FD
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 230 MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR---------------RMSPDPVTLL 274
M VRD++SWN +++GYAQ+G +L+ E ++ RM + L
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 275 AVL------SSCANLGAQVVG--VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
+ S A L V G +E+ +++ N N +I YA+CG ++ A+
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKN 364
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+FD M + VSW A A+ LF +M R G R +R+ F + LS C+
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ G + K G + G + L+ + + G ++EA DL K M K D W ++
Sbjct: 425 LELGKQLHGRLV-KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMI 482
Query: 447 GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
H E+A FE + L+P + +LS
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 114/272 (41%), Gaps = 28/272 (10%)
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D+D+ N ++ Y++ G A ++F M +S+N M+SGY +NG +L+ E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M R + V + + + NLG E+ + + C + N +++ YA+ G
Sbjct: 121 MPERDLVSWNVMIKGYVRN-RNLGKARELFEIMPERDVCSW-------NTMLSGYAQNGC 172
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ AR+VFD M +K+ VSW A A LF R + V
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF---------KSRENWALVSWN 223
Query: 381 CSHAGLTDK-----GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
C G K +FD M + + ++ ++ ++G++ EA L V
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVS-----WNTIITGYAQSGKIDEARQLFDESPV 278
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
+ D W A++ ++ VE A F+ + E
Sbjct: 279 Q-DVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 20 PKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCA-ILSL 78
PKR PV +W + S+ EAL L+ M R +CA +++L
Sbjct: 370 PKRDPV----SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 79 PLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISG 137
L G QLH +++ G + + ++L+ MY KC A +F E I S+N MI+G
Sbjct: 426 EL-GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
YS + A+ F M+RE + TM+ ++S C+ TG G
Sbjct: 485 YSRHGFGEVALRFFESMKREG------LKPDDATMVAVLSACS-----HTGLVDKGRQYF 533
Query: 198 FGLDADLAVM-NS-----FLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGH 250
+ + D VM NS + + + G +E A L M D W ++ A H
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG--ASRVH 591
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSS 279
L K+ M P+ + +LS+
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSN 620
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 319/566 (56%), Gaps = 21/566 (3%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
++HA V+RTG + L+ AR+VFDE H I +N + GY N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 143 MFADAVSLFRRMR----REDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ +++ L+++MR R D T F +++ LG S G LH V +
Sbjct: 89 LPFESLLLYKKMRDLGVRPD-EFTYPFVVKAISQLGDFS---------CGFALHAHVVKY 138
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G V + MY+K GE+ A LF+ M V+DL++WNA ++ Q G++A LE +
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
++M + D T++++LS+C LG+ +G E+ + + N + NA ++M+ +C
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
GN AR +F+ M ++VVSW+ A+ LF M G+RP+ F+ VL
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 379 SACSHAGLTDKGLHYFDEM--ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
SACSHAGL ++G YF M L+P EHY+C+VDLLGR+G L+EA + IK M V+
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE 378
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVR 496
PD +WGALLGAC +H+++ L + + ++E P Y+VLLSNIY+ A + V +VR
Sbjct: 379 PDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 497 VMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDE- 554
MR+ +K S VE++GK+H F GD++HPQ K IY K+ E+ + ++ + PD
Sbjct: 439 SKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTC 498
Query: 555 --KYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIV 612
+ V EE HSE+LAIAF L+ RPG I +MKNLR C DCH F K VS +
Sbjct: 499 SVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLT 558
Query: 613 NRQFIIRDATRFHHFRDGVCSCKDYW 638
+ + I+RD RFHHFR+GVCSCK++W
Sbjct: 559 STEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 9/256 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + + E+L LY+ M K+ + L GF LHAHV+
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAV 148
+ G + L+ MY K A +F+ + +L +++NA ++ A A+
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDL-VAWNAFLAVCVQTGNSAIAL 195
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
F +M + F+S T++ ++S C L G ++ A +D ++ V N
Sbjct: 196 EYFNKMCAD------AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ L M++KCG E AR LF+EM R+++SW+ M+ GYA NG + L L+ M+ + P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 269 DPVTLLAVLSSCANLG 284
+ VT L VLS+C++ G
Sbjct: 310 NYVTFLGVLSACSHAG 325
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/564 (36%), Positives = 320/564 (56%), Gaps = 14/564 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL--ARRVFDETHNLPIS--YNAMISGYS 139
++H+HVI G Q P + L+ + L A+ +FD + P + +N +I G+S
Sbjct: 23 KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFS 82
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+S +++ + RM S F FN + C +P +HG + G
Sbjct: 83 NSSSPLNSILFYNRMLLSSVSRPDLFTFNFA-----LKSCERIKSIPKCLEIHGSVIRSG 137
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
D V S + Y G VE+A ++FDEM VRDL+SWN M+ ++ G + L +Y
Sbjct: 138 FLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYK 197
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
M + D TL+A+LSSCA++ A +GV + R S F++NALI+MYA+CG
Sbjct: 198 RMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCG 257
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+L A VF+GM + V++W + A+ F +MV SGVRP+ F+ +L
Sbjct: 258 SLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLL 317
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
CSH GL +G+ +F+ M ++ L P +HY C+VDL GRAG+L+ ++++I + D
Sbjct: 318 GCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDP 377
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
+W LLG+CKIH+N+EL E+A + +++LE N G YVL+++IYS A +++ +R ++
Sbjct: 378 VLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLI 437
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELEN-SVMEIHRPDEKYR- 557
R L+ PG S++E +VH F D+ HP+ IY ++ E+ N +++ ++P++ R
Sbjct: 438 RSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRT 497
Query: 558 ---VRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
+ L + + HSE+LAIA+ L+ T GT + I KNLRVC DCH F K VSK NR
Sbjct: 498 APTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNR 557
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
+ I+RD RFHHF DG+CSC DYW
Sbjct: 558 EIIVRDRVRFHHFADGICSCNDYW 581
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)
Query: 26 NPTTA-WNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCA-ILSLPLTG 82
+P+T+ WN + S ++ Y ML SS KSC I S+P
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP-KC 126
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGY 138
++H VIR+G D +SL+ YS +A +VFDE +P +S+N MI +
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDE---MPVRDLVSWNVMICCF 183
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
S + A+S+++RM E +S T++ L+S C + L G LH A
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCG------DSYTLVALLSSCAHVSALNMGVMLHRIACDI 237
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
++ + V N+ + MY KCG +E A +F+ M RD+++WN+M+ GY +GH + +
Sbjct: 238 RCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFF 297
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE-VERKIEQCGFGSNPFLTNALINMYAR 317
+M + P+ +T L +L C++ G GVE E Q N ++++Y R
Sbjct: 298 RKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGR 357
Query: 318 CGNL 321
G L
Sbjct: 358 AGQL 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +WN+ + S + +ALS+Y+ M SCA +S G
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV 228
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
LH + + ++LI MY+KC A VF+ + ++N+MI GY ++
Sbjct: 229 MLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG 288
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
+A+S FR+M +S V+ N++T LGL+ GC+
Sbjct: 289 HGVEAISFFRKMV----ASGVR--PNAITFLGLLLGCS 320
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/679 (31%), Positives = 348/679 (51%), Gaps = 87/679 (12%)
Query: 38 LSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPD 97
L+K + + +++ ++ M K CA LS G Q+H +G D
Sbjct: 91 LTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 98 PYTRSSLISMYSKCSLPFLARRVFDETHNLPI---------------------------- 129
+ + S+ MY +C AR+VFD + +
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 130 --------SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNL 181
S+N ++SG++ + +AV +F+++ + F + VT+ ++
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH------LGFCPDQVTVSSVLPSVGD 264
Query: 182 PNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEV--------------------- 220
L G +HG + GL D V+++ + MY K G V
Sbjct: 265 SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY 324
Query: 221 --ELAR-----------QLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
L+R +LF E + +++SW ++++G AQNG LEL+ EM++ +
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
P+ VT+ ++L +C N+ A G + N + +ALI+MYA+CG + ++
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
VF+ M K++V W + + +F+ ++R+ ++PD F ++LSAC GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
TD+G YF M +YG++P EHYSC+V+LLGRAG+L+EA DLIK M +PD VWGALL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
+C++ NV+LAE+A E + LEP N G YVLLSNIY+ V +R M L+K
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 507 DPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRV------R 559
+PGCS+++ K +V+ +GD++HPQ+ +I K+ E+ + + HRP+ + +
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQE 684
Query: 560 SEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIR 619
E++L G HSE+LA+ F LL+T GT + ++KNLR+C DCH +K +S R+ IR
Sbjct: 685 QEQMLWG---HSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIR 741
Query: 620 DATRFHHFRDGVCSCKDYW 638
D RFHHF+DG+CSC D+W
Sbjct: 742 DTNRFHHFKDGICSCGDFW 760
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 199/497 (40%), Gaps = 85/497 (17%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
Q HA ++++G+Q D Y + LI+ YS + A V + I S++++I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+F ++ +F RM +S + L C + G +H + GLD
Sbjct: 96 LFTQSIGVFSRMFSHG------LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRD---------------------------- 234
D V S MY++CG + AR++FD M +D
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 235 -------LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
++SWN ++SG+ ++G+ + ++ ++ PD VT+ +VL S +
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF------------------- 328
+G + + + G + + +A+I+MY + G++ ++F
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 329 -DGMVDKS---------------VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
+G+VDK+ VVSWT+ A+ELF EM +GV+P+
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 373 VFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
++L AC + G H F + L S L+D+ + GR+ + +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGF---AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI--ELEPTNIGYYVLLSNIYSDAKN 488
M K + W +L+ +H + FE ++ L+P I + LLS
Sbjct: 447 NMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 489 SEGVLRVRVMMRERKLR 505
EG ++M E ++
Sbjct: 506 DEGWKYFKMMSEEYGIK 522
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/541 (37%), Positives = 317/541 (58%), Gaps = 12/541 (2%)
Query: 104 LISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSLFRRMRREDGSST 162
LI+ Y + AR+VFDE + ++ +NAMI+G + +SLFR M
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH------G 84
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
+ F+ + T+ + SG + G +HG + +GL+ DL V +S MY++ G+++
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
+ M VR+L++WN ++ G AQNG VL LY MK+ P+ +T + VLSSC++
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAX 342
L + G ++ + + G S + ++LI+MY++CG L A F D+ V W++
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSM 264
Query: 343 XXXXXXXXXXXXAVELFDEMV-RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
A+ELF+ M ++ + + F+ +L ACSH+GL DKGL FD M KY
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
G +PG +HY+C+VDLLGRAG L +A +I+SM +K D +W LL AC IHKN E+A+
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 462 FEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHV 521
F+ +++++P + YVLL+N+++ AK V VR MR++ ++K+ G S+ E+KG+VH
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQ 444
Query: 522 FYSGDRNHPQMKEIYRKVAELENSV-MEIHRPDEK---YRVRSEELLNGNGVHSERLAIA 577
F GDR+ + KEIY + EL + ++ ++PD + + EE + HSE+LA+A
Sbjct: 445 FKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVA 504
Query: 578 FALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDY 637
FAL+ G I I+KNLRVC DCH+ K +S I NR+ +RD +RFHHF +G CSC DY
Sbjct: 505 FALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDY 564
Query: 638 W 638
W
Sbjct: 565 W 565
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 2/277 (0%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
N + YV+ G++ AR++FDEM R L +WNAM++G Q L L+ EM S
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
PD TL +V S A L + +G ++ + G + + ++L +MY R G L V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
M +++V+W + L+ M SG RP++ FVTVLS+CS +
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
+G E K G S L+ + + G L +A S + D +W +++
Sbjct: 209 GQGQQIHAE-AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMIS 266
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYS 484
A H + A F + E I L+ +Y+
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 15/366 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P T WN + L + +E LSL+R M A L G
Sbjct: 52 PDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQ 111
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLN 141
Q+H + I+ G + D SSL MY + V NL +++N +I G + N
Sbjct: 112 QIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL-VAWNTLIMGNAQN 170
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ L++ M+ N +T + ++S C+ G +H A+ G
Sbjct: 171 GCPETVLYLYKMMKISGCRP------NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ +AV++S ++MY KCG + A + F E D + W++M+S Y +G +EL++ M
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 262 -KLRRMSPDPVTLLAVLSSCANLGAQVVGVEV-ERKIEQCGFGSNPFLTNALINMYARCG 319
+ M + V L +L +C++ G + G+E+ + +E+ GF ++++ R G
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 320 NLARARAVFDGM-VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
L +A A+ M + +V W A +F E+++ + P+ + VL
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSA-CYVL 401
Query: 379 SACSHA 384
A HA
Sbjct: 402 LANVHA 407
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV 363
N +N LIN Y R G+L AR VFD M D+ + +W A + LF EM
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 364 RSGVRPDRTVFVTVLSACSHAGLTDKGL-HYFDEMERKYGLQPGPEHYSCLVDLLGRAGR 422
G PD +V S AGL + KYGL+ S L + R G+
Sbjct: 84 GLGFSPDEYTLGSVFSGS--AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 141
Query: 423 LKEAMDLIKSMKVKPDGAVWGALL 446
L++ +I+SM V+ + W L+
Sbjct: 142 LQDGEIVIRSMPVR-NLVAWNTLI 164
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 345/647 (53%), Gaps = 46/647 (7%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAH 88
+W + +++ K+A+ L+ M+R +CA L TG +++A
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLNSMFAD 146
+ +G + + S+L+ MY KC+ +A+R+FDE NL + NAM S Y + +
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTRE 320
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A+ +F M S V+ + ++ML +S C+ ++ G HG + G ++ +
Sbjct: 321 ALGVFNLMM----DSGVRPD--RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
N+ + MY+KC + A ++FD M + +++WN++V+GY +NG E + M + +
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 267 --------------------------------SPDPVTLLAVLSSCANLGAQVVGVEVER 294
+ D VT++++ S+C +LGA + +
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
IE+ G + L L++M++RCG+ A ++F+ + ++ V +WTA
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
A+ELFD+M+ G++PD FV L+ACSH GL +G F M + +G+ P HY C+V
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
DLLGRAG L+EA+ LI+ M ++P+ +W +LL AC++ NVE+A A E + L P G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 475 YYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKE 534
YVLLSN+Y+ A + +VR+ M+E+ LRK PG S ++ +GK H F SGD +HP+M
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 535 IYRKVAELENSVMEI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEIT 590
I + E+ + H PD V +E + HSE+LA+A+ L+S+ GT I
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIR 794
Query: 591 IMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDY 637
I+KNLRVC DCH F K SK+ NR+ I+RD RFH+ R G CSC D+
Sbjct: 795 IVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 218/467 (46%), Gaps = 46/467 (9%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
EA+ L+ M+ S +CA G Q+H +++ G D + ++SL+
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 106 SMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
Y++C AR+VFDE + +S+ +MI GY+ DAV LF RM R++ +
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE-----E 231
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
NSVTM+ ++S C L TG ++ G++ + ++++ + MY+KC +++A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 225 QLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
+LFDE +L NAM S Y + G L +++ M + PD +++L+ +SSC+ L
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
+ G + + GF S + NALI+MY +C A +FD M +K+VV+W +
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 345 XXXXXXXXXXAVELFDEM--------------------------------VRSGVRPDRT 372
A E F+ M + GV D
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 373 VFVTVLSACSHAGLTD--KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+++ SAC H G D K ++Y+ E K G+Q + LVD+ R G + AM +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIE---KNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGY 475
S+ + D + W A +GA + N E A F+ +IE L+P + +
Sbjct: 529 NSLTNR-DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 190/396 (47%), Gaps = 28/396 (7%)
Query: 85 LHAHVIRTGSQPDPYTRSSLIS----MYSKCSLPFLARRVFD--ETHNLPISYNAMISGY 138
H + + G D T + L++ + ++ SL F A+ VF+ E++ YN++I GY
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSF-AKEVFENSESYGTCFMYNSLIRGY 109
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ + + +A+ LF RM G S K+ F GL S C G +HG V
Sbjct: 110 ASSGLCNEAILLFLRMMNS-GISPDKYTFP----FGL-SACAKSRAKGNGIQIHGLIVKM 163
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G DL V NS + Y +CGE++ AR++FDEM R+++SW +M+ GYA+ A ++L+
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 259 HEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
M + ++P+ VT++ V+S+CA L G +V I G N + +AL++MY +
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
C + A+ +FD ++ A A+ +F+ M+ SGVRPDR ++
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 378 LSACSHAG--LTDKGLHYFDEMERKYGLQPGPEHY----SCLVDLLGRAGRLKEAMDLIK 431
+S+CS L K H Y L+ G E + + L+D+ + R A +
Sbjct: 344 ISSCSQLRNILWGKSCH-------GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 432 SMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
M K W +++ + V+ A FE + E
Sbjct: 397 RMSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPE 431
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/604 (36%), Positives = 318/604 (52%), Gaps = 64/604 (10%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISM-YSKCSLPFL--ARRVFDETHNLPISY--NAMISGY 138
Q+HA +++TG D Y + +S S S FL A+ VFD + P ++ N MI G+
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD-GFDRPDTFLWNLMIRGF 90
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
S + ++ L++RM N+ T L+ C+ + T +H
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPH------NAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 199 GLDADLAVMNSFLTMY-------------------------------VKCGEVELARQLF 227
G + D+ +NS + Y VK G++++A LF
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 228 DEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
+M ++ ISW M+SGY Q L+L+HEM+ + PD V+L LS+CA LGA
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
G + + + + L LI+MYA+CG + A VF + KSV +WTA
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A+ F EM + G++P+ F VL+ACS+ GL ++G F MER Y L+P
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
EHY C+VDLLGRAG L EA I+ M +KP+ +WGALL AC+IHKN+EL E E +I
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR 527
++P + G YV +NI++ K + R +M+E+ + K PGCS + +G H F +GDR
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 528 NHPQMKEIYRK-------------VAELENSVMEIHRPDEKYRVRSEELLNGNGVHSERL 574
+HP++++I K V ELE ++++ DE+ + + HSE+L
Sbjct: 505 SHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ--------HSEKL 556
Query: 575 AIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSC 634
AI + L+ T+PGT I IMKNLRVC DCH KL+SKI R ++RD TRFHHFRDG CSC
Sbjct: 557 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 616
Query: 635 KDYW 638
DYW
Sbjct: 617 GDYW 620
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 36/346 (10%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T WNL + S + + +L LY+ ML SS K+C+ LS Q+HA
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSM 143
+ + G + D Y +SLI+ Y+ LA +FD +P +S+N++I GY
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD---RIPEPDDVSWNSVIKGYVKAGK 196
Query: 144 FADAVSLFRRMRREDG-------SSTVKFNFN------------------SVTMLGLVSG 178
A++LFR+M ++ S V+ + N +V++ +S
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 179 CNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISW 238
C L G +H + D + + MY KCGE+E A ++F + + + +W
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 316
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
A++SGYA +GH + + EM+ + P+ +T AVL++C+ G G + +E+
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 376
Query: 299 CGFGSNPFLTN--ALINMYARCGNLARARAVFDGM-VDKSVVSWTA 341
+ P + + ++++ R G L A+ M + + V W A
Sbjct: 377 -DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/631 (34%), Positives = 348/631 (55%), Gaps = 30/631 (4%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
+ V WN + + EAL ++ M + K CA L
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--ISYNAMISGYS 139
QLH V++ G D R++L+ YSKC+ A R+F E + +S+ AMISG+
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSV-TMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
N +AV LF M+R+ G +F ++ + T L ++S P+ + H V
Sbjct: 374 QNDGKEEAVDLFSEMKRK-GVRPNEFTYSVILTALPVIS----PSEV------HAQVVKT 422
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
+ V + L YVK G+VE A ++F + +D+++W+AM++GYAQ G ++++
Sbjct: 423 NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 259 HEMKLRRMSPDPVTLLAVLSSCA------NLGAQVVGVEVERKIEQCGFGSNPFLTNALI 312
E+ + P+ T ++L+ CA G Q G ++ +++ S+ +++AL+
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD-----SSLCVSSALL 537
Query: 313 NMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
MYA+ GN+ A VF +K +VSW + A+++F EM + V+ D
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
F+ V +AC+HAGL ++G YFD M R + P EH SC+VDL RAG+L++AM +I++
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 433 MKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGV 492
M +W +L AC++HK EL LA E +I ++P + YVLLSN+Y+++ + +
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQER 717
Query: 493 LRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HR 551
+VR +M ER ++K+PG S++E K K + F +GDR+HP +IY K+ +L + ++ +
Sbjct: 718 AKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYE 777
Query: 552 PDEKYRVRSEELLNGNGV---HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLV 608
PD Y ++ + + V HSERLAIAF L++T G+ + I+KNLRVC DCH+ +KL+
Sbjct: 778 PDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLI 837
Query: 609 SKIVNRQFIIRDATRFHHF-RDGVCSCKDYW 638
+KI R+ ++RD+ RFHHF DGVCSC D+W
Sbjct: 838 AKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 195/417 (46%), Gaps = 16/417 (3%)
Query: 35 LMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGS 94
L S+ + +EA L+ ++ R K A L L G QLH I+ G
Sbjct: 65 LFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF 124
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRR 153
D +SL+ Y K S R+VFDE +++ +ISGY+ NSM + ++LF R
Sbjct: 125 LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTM 213
M+ E G+ F F + LG+++ + G +H V GLD + V NS + +
Sbjct: 185 MQNE-GTQPNSFTFAAA--LGVLAEEGVGGR---GLQVHTVVVKNGLDKTIPVSNSLINL 238
Query: 214 YVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
Y+KCG V AR LFD+ V+ +++WN+M+SGYA NG L +++ M+L + +
Sbjct: 239 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD--GM 331
+V+ CANL ++ + + GF + + AL+ Y++C + A +F G
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 332 VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
V +VVSWTA AV+LF EM R GVRP+ + +L+A ++
Sbjct: 359 VG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHA 417
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
K + + L+D + G+++EA + + K D W A+L
Sbjct: 418 QVV-----KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAG 468
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 161/358 (44%), Gaps = 15/358 (4%)
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
SY +++ G+S + +A LF + R F+SV L L + L G
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI-FSSV----LKVSATLCDEL-FGR 113
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
LH + FG D++V S + Y+K + R++FDEM R++++W ++SGYA+N
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
VL L+ M+ P+ T A L A G G++V + + G ++N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 310 ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRP 369
+LIN+Y +CGN+ +AR +FD KSVV+W + A+ +F M + VR
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 370 DRTVFVTVLSACSHAGLTDKGLHYFDEME---RKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
+ F +V+ C++ K L + +++ KYG + L+ + + +A
Sbjct: 294 SESSFASVIKLCANL----KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNI 482
+ L K + + W A++ + E A F + + P Y V+L+ +
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 14/293 (4%)
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
A LFD+ RD S+ +++ G++++G L+ + M D +VL A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAX 342
L ++ G ++ + + GF + + +L++ Y + N R VFD M +++VV+WT
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 343 XXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYG 402
+ LF M G +P+ F L + G+ +GL + K G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ-VHTVVVKNG 224
Query: 403 LQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
L + L++L + G +++A L +VK W +++ +
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISGYAANG--------- 274
Query: 463 EHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEY 515
++LE + Y + L+ + + V+++ ++E + + CS V+Y
Sbjct: 275 ---LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/624 (34%), Positives = 326/624 (52%), Gaps = 17/624 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W + L++ + AL + M R K+ A L LP+TG
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLN 141
Q+HA ++ G D + S MY K L AR++FDE NL ++NA IS +
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE-TWNAFISNSVTD 187
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+A+ F RR DG NS+T ++ C+ HL G LHG + G D
Sbjct: 188 GRPREAIEAFIEFRRIDGHP------NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D++V N + Y KC ++ + +F EM ++ +SW ++V+ Y QN + LY
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ + + +VLS+CA + +G + + F+ +AL++MY +CG +
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV--RPDRTVFVTVLS 379
+ FD M +K++V+ + A+ LF+EM G P+ FV++LS
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
ACS AG + G+ FD M YG++PG EHYSC+VD+LGRAG ++ A + IK M ++P
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
+VWGAL AC++H +L LA E++ +L+P + G +VLLSN ++ A VR +
Sbjct: 482 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI--HRPDEK-- 555
+ ++K G S++ K +VH F + DR+H KEI +A+L N ME ++PD K
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE-MEAAGYKPDLKLS 600
Query: 556 -YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
Y + EE HSE+LA+AF LLS I I KNLR+C DCH F K VS V R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
+ I+RD RFH F+DG+CSCKDYW
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDYW 684
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 185/402 (46%), Gaps = 27/402 (6%)
Query: 82 GFQLHAHVIRT-GSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGY 138
G +HA +++T S P P+ + LI+MYSK P AR V T N+ +S+ ++ISG
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNV-VSWTSLISGL 83
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ N F+ A+ F MRRE V +F V+ LP TG +H AV
Sbjct: 84 AQNGHFSTALVEFFEMRRE---GVVPNDFTFPCAFKAVASLRLP---VTGKQIHALAVKC 137
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G D+ V S MY K + AR+LFDE+ R+L +WNA +S +G +E +
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
E + P+ +T A L++C++ +G+++ + + GF ++ + N LI+ Y +C
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
+ + +F M K+ VSW + A L+ + V + +VL
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 379 SACSH-AGLT-DKGLHYFDEMERKYGLQPGPEHY----SCLVDLLGRAGRLKEAMDLIKS 432
SAC+ AGL + +H + ++ E S LVD+ G+ G ++++
Sbjct: 318 SACAGMAGLELGRSIH-------AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 433 MKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
M K + +L+G V++A FE E+ P G
Sbjct: 371 MPEK-NLVTRNSLIGGYAHQGQVDMALALFE---EMAPRGCG 408
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/626 (34%), Positives = 334/626 (53%), Gaps = 28/626 (4%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
W L + + +EA+ + M+ S +CA L G QLH+
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLA---RRVFD--ETHNLPISYNAMISGYSLNSMF 144
IR+G D SL+ MY+KCS R+VFD E H++ +S+ A+I+GY N
Sbjct: 296 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV-MSWTALITGYMKNCNL 352
Query: 145 A-DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
A +A++LF M + F F+S C + G + G A GL ++
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSA-----FKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+V NS ++M+VK +E A++ F+ + ++L+S+N + G +N + + +L E+
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
R + T ++LS AN+G+ G ++ ++ + G N + NALI+MY++CG++
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
A VF+ M +++V+SWT+ +E F++M+ GV+P+ +V +LSACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
GL +G +F+ M + ++P EHY+C+VDLL RAG L +A + I +M + D VW
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 444 ALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERK 503
LGAC++H N EL +LA ++EL+P Y+ LSNIY+ A E +R M+ER
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 504 LRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHR----PDEKYRVR 559
L K+ GCS++E K+H FY GD HP +IY EL+ + EI R PD +
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYD---ELDRLITEIKRCGYVPDTDLVLH 764
Query: 560 SEELLNGNGV-------HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIV 612
E N HSE++A+AF L+ST + + KNLRVC DCH MK +S +
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVS 824
Query: 613 NRQFIIRDATRFHHFRDGVCSCKDYW 638
R+ ++RD RFHHF+DG CSC DYW
Sbjct: 825 GREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 184/405 (45%), Gaps = 26/405 (6%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISG 137
G +HA +I +PD +SLIS+YSK A VF+ +S++AM++
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
Y N DA+ +F E G + + +V + C+ + + G G +
Sbjct: 141 YGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAV-----IRACSNSDFVGVGRVTLGFLMK 194
Query: 198 FG-LDADLAVMNSFLTMYVKCGE--VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARV 254
G ++D+ V S + M+VK GE E A ++FD+M ++++W M++ Q G
Sbjct: 195 TGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+ + +M L D TL +V S+CA L +G ++ + G + + +L++M
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDM 311
Query: 315 YARC---GNLARARAVFDGMVDKSVVSWTAXXXXXXXX-XXXXXAVELFDEMVRSG-VRP 369
YA+C G++ R VFD M D SV+SWTA A+ LF EM+ G V P
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 370 DRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
+ F + AC + G + ++ GL + ++ + ++ R+++A
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRA 430
Query: 430 IKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
+S+ K + L G C +N+ E AF+ + E+ +G
Sbjct: 431 FESLSEKNLVSYNTFLDGTC---RNLNF-EQAFKLLSEITERELG 471
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
A L+L +R M D VT ++L SC +G V ++ + + L N+
Sbjct: 45 AVSALDLMARDGIRPM--DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 311 LINMYARCGNLARARAVFDGMV---DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
LI++Y++ G+ A+A VF+ M + VVSW+A A+++F E + G+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 368 RPDRTVFVTVLSACSHAGLTDKG 390
P+ + V+ ACS++ G
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVG 185
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 308/549 (56%), Gaps = 21/549 (3%)
Query: 97 DPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMR 155
D R+S+I K AR +FDE + I++ M++GY N+ DA +F M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 156 REDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYV 215
+ S V + L +P + A+ GL
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQK------------ 278
Query: 216 KCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLA 275
GE+ AR++FD M R+ SW ++ + +NG L+L+ M+ + + P TL++
Sbjct: 279 --GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
+LS CA+L + G +V ++ +C F + ++ + L+ MY +CG L +++ +FD K
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLHYF 394
++ W + A+++F EM SG +P+ FV LSACS+AG+ ++GL +
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 395 DEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKN 454
+ ME +G++P HY+C+VD+LGRAGR EAM++I SM V+PD AVWG+LLGAC+ H
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Query: 455 VELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVE 514
+++AE + +IE+EP N G Y+LLSN+Y+ V +R +M+ R +RK PGCS+ E
Sbjct: 517 LDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTE 576
Query: 515 YKGKVHVFYSGDRN-HPQMKEIYRKVAELENSVMEI-HRPDEKY---RVRSEELLNGNGV 569
+ KVH F G N HP+ + I + + EL+ + E + PD Y V EE +N
Sbjct: 577 VENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKY 636
Query: 570 HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRD 629
HSERLA+A+ALL G I +MKNLRVC DCH +K++SK+ R+ I+RDA RFHHFR+
Sbjct: 637 HSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRN 696
Query: 630 GVCSCKDYW 638
G CSCKDYW
Sbjct: 697 GECSCKDYW 705
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 75/361 (20%)
Query: 98 PYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSLFRRMRR 156
P T + I+ S+ AR++FD + IS +N+M++GY N M DA LF M
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP- 75
Query: 157 EDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVK 216
+ N ++ GLVSG Y+K
Sbjct: 76 ---------DRNIISWNGLVSG-----------------------------------YMK 91
Query: 217 CGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAV 276
GE++ AR++FD M R+++SW A+V GY NG L+ +M + V L+
Sbjct: 92 NGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGF 151
Query: 277 LSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV 336
L Q ++ K+ + + ++I+ + G + AR +FD M ++SV
Sbjct: 152 L--------QDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Query: 337 VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT--VFVTVLSACSHAGLTDKGLHYF 394
++WT A ++FD M P++T + ++L G + F
Sbjct: 204 ITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 395 DEMERKYGLQPGPEHYSC--LVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIH 452
+ M P +C ++ LG+ G + +A + SMK + D A W ++ KIH
Sbjct: 258 EVM-------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND-ASWQTVI---KIH 306
Query: 453 K 453
+
Sbjct: 307 E 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 19/263 (7%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
N +T + G++ AR+LFD + + SWN+MV+GY N +L+ EM R +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
++ ++S G ++ RK+ N AL+ Y G + A ++
Sbjct: 80 ---ISWNGLVSGYMKNGE----IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
F M +K+ VSWT A +L+ EM+ D +++ G
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPD---KDNIARTSMIHGLCKEGRV 188
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
D+ FDEM + + ++ +V G+ R+ +A + M K + W ++L
Sbjct: 189 DEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSMLM 242
Query: 448 ACKIHKNVELAELAFEHVIELEP 470
+ +E AE FE V+ ++P
Sbjct: 243 GYVQNGRIEDAEELFE-VMPVKP 264
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
EAL L+ M + CA L+ G Q+HA ++R D Y S L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 106 SMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
+MY KC ++ +FD + I +N++ISGY+ + + +A+ +F M +
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP-- 431
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLH-GCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
N VT + +S C+ + G ++ FG+ A + M + G A
Sbjct: 432 ---NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 224 RQLFDEMLVR-DLISWNAMVSG 244
++ D M V D W +++
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGA 510
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/588 (35%), Positives = 319/588 (54%), Gaps = 31/588 (5%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G ++H H+ +G P + L+ MY+KC AR+VFDE N + S+N M++GY+
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 141 NSMFADAVSLFRRMRREDGSST-------VKFNFNSVTMLGLVSGCNLPNHLPT------ 187
+ +A LF M +D S VK + ++ +PN P
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 188 -------------GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
G +HG V GLD+D + +S + MY KCG ++ AR +FD+++ +D
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER 294
++SW +M+ Y ++ L+ E+ P+ T VL++CA+L + +G +V
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+ + GF F +++L++MY +CGN+ A+ V DG +VSWT+
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
A++ FD +++SG +PD FV VLSAC+HAGL +KGL +F + K+ L +HY+CLV
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
DLL R+GR ++ +I M +KP +W ++LG C + N++LAE A + + ++EP N
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV 523
Query: 475 YYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKE 534
YV ++NIY+ A E ++R M+E + K PG S+ E K K HVF + D +HP +
Sbjct: 524 TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQ 583
Query: 535 IYRKVAELENSVMEI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEIT 590
I + EL + E + P + V E+ HSE+LA+AFA+LST GT I
Sbjct: 584 IVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIK 643
Query: 591 IMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+ KNLR CVDCH +K +S I R+ +RD+TRFH F +G CSC DYW
Sbjct: 644 VFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 164/372 (44%), Gaps = 46/372 (12%)
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ +AV L R ++ S T L+ C+ L G +H T G
Sbjct: 69 LLREAVQLLGRAKKPPAS----------TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
+ + N L MY KCG + AR++FDEM RDL SWN MV+GYA+ G +L+ EM
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 263 --------------LRRMSPDPVTLLAVL-----SSCANLGAQVV-------------GV 290
+++ P+ +L L +S N+ + G
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
E+ I + G S+ L ++L++MY +CG + AR +FD +V+K VVSWT+
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
LF E+V S RP+ F VL+AC+ + G M R G P
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFAS 357
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--L 468
S LVD+ + G ++ A ++ KPD W +L+G C + + A F+ +++
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 469 EPTNIGYYVLLS 480
+P ++ + +LS
Sbjct: 417 KPDHVTFVNVLS 428
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 169/421 (40%), Gaps = 51/421 (12%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT-GFQLHAH 88
+W + K+ Q +EAL LY M R + A + G ++H H
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADA 147
++R G D SSL+ MY KC AR +FD+ +S+ +MI Y +S + +
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREG 303
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
SLF + GS N T G+++ C G +HG G D
Sbjct: 304 FSLFSELV---GSCERP---NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
+S + MY KCG +E A+ + D DL+SW +++ G AQNG L+ + +
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKI-EQCGFGSNPFLTNALINMYARCGNLARARA 326
PD VT + VLS+C + G G+E I E+ L+++ AR G + ++
Sbjct: 418 PDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKS 477
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
V M ++P + ++ +VL CS G
Sbjct: 478 VISEM----------------------------------PMKPSKFLWASVLGGCSTYGN 503
Query: 387 TDKGLHYFDEMERKYGLQP-GPEHYSCLVDLLGRAGRLKEAMDLIKSMK----VKPDGAV 441
D E+ + ++P P Y + ++ AG+ +E + K M+ K G+
Sbjct: 504 IDLAEEAAQEL---FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Query: 442 W 442
W
Sbjct: 561 W 561
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/566 (35%), Positives = 308/566 (54%), Gaps = 25/566 (4%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH-NLPISYNAMISGYSL 140
G Q+HAHVIR G + + +++MY KC A+RVFD+ P++ ++ GY+
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
DA+ LF + E G F F+ V + C L G +H C GL
Sbjct: 263 AGRARDALKLFVDLVTE-GVEWDSFVFSVV-----LKACASLEELNLGKQIHACVAKLGL 316
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+++++V + Y+KC E A + F E+ + +SW+A++SGY Q ++ +
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 261 MKLRRMSP-DPVTLLAVLSSCA-----NLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
++ + S + T ++ +C+ N+G QV ++R + +G + ALI M
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES-----ALITM 431
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
Y++CG L A VF+ M + +V+WTA A+ LF++MV G++P+ F
Sbjct: 432 YSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF 491
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
+ VL+ACSHAGL ++G H D M RKY + P +HY C++D+ R+G L EA+ +K+M
Sbjct: 492 IAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Query: 435 VKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLR 494
+PD W L C HKN+EL E+A E + +L+P + YVL N+Y+ A E
Sbjct: 552 FEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAE 611
Query: 495 VRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDE 554
+ +M ER L+K+ CS+++ KGK+H F GD++HPQ +EIY K+ E + ME
Sbjct: 612 MMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDG-FMEGDMFQC 670
Query: 555 KYRVRSEELLNGNGVHSERLAIAFALLSTRPG--TEITIMKNLRVCVDCHIFMKLVSKIV 612
R E+LL+ HSERLAIAF L+S I + KNLR C DCH F K VS +
Sbjct: 671 NMTERREQLLD----HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVT 726
Query: 613 NRQFIIRDATRFHHFRDGVCSCKDYW 638
+ +IRD+ RFHHF++G CSC DYW
Sbjct: 727 GHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 197/455 (43%), Gaps = 16/455 (3%)
Query: 32 NLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIR 91
NL L+ LSK R+ EA + M ++ ++C L G LH +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 92 TGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADAVSL 150
P ++ ++ MY +C A ++FDE L +S MIS Y+ + AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
F M + + + LV+ P L G +H + GL ++ ++
Sbjct: 172 FSGMLASGDKPPS--SMYTTLLKSLVN----PRALDFGRQIHAHVIRAGLCSNTSIETGI 225
Query: 211 LTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDP 270
+ MYVKCG + A+++FD+M V+ ++ ++ GY Q G A L+L+ ++ + D
Sbjct: 226 VNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDS 285
Query: 271 VTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDG 330
VL +CA+L +G ++ + + G S + L++ Y +C + A F
Sbjct: 286 FVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 331 MVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM-VRSGVRPDRTVFVTVLSACS-HAGLTD 388
+ + + VSW+A AV+ F + ++ + + ++ ACS A
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 389 KGLHYFDEMERKY-GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
G + D ++R G Q G S L+ + + G L +A ++ +SM PD W A +
Sbjct: 406 GGQVHADAIKRSLIGSQYGE---SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFIS 461
Query: 448 ACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
+ N A FE ++ ++P ++ + +L+
Sbjct: 462 GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 496
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/631 (34%), Positives = 326/631 (51%), Gaps = 86/631 (13%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKC----SLPFLARRVFDET--------------- 124
Q HA +++G+ ++L+S+YSKC SL AR+VFDE
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 125 -----------------HNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFN 166
N+ ++YNAMISGY + +A+ + RRM G +F
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV-SSGIELDEFT 288
Query: 167 FNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQL 226
+ SV + C L G +H V D NS +++Y KCG+ + AR +
Sbjct: 289 YPSV-----IRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 227 FDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM-------------------- 266
F++M +DL+SWNA++SGY +GH ++ EMK + +
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 267 -----------SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
P + SCA LGA G + ++ + GF S+ NALI MY
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
A+CG + AR VF M VSW A AV++++EM++ G+RPDR +
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
TVL+ACSHAGL D+G YFD ME Y + PG +HY+ L+DLL R+G+ +A +I+S+
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPF 582
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRV 495
KP +W ALL C++H N+EL +A + + L P + G Y+LLSN+++ E V RV
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARV 642
Query: 496 RVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDE 554
R +MR+R ++K+ CS++E + +VH F D +HP+ + +Y + +L + + + PD
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDT 702
Query: 555 KYRVRS-------EELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKL 607
+ + E++L HSE++A+AF L+ PGT I I KNLR C DCH F +
Sbjct: 703 SFVLHDVESDGHKEDMLT---THSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRF 759
Query: 608 VSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+S +V R I+RD RFHHFR+G CSC ++W
Sbjct: 760 LSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 160/346 (46%), Gaps = 39/346 (11%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
A+N + + Y+EAL + R M+ S ++CA L G Q+HA+
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSMF 144
V+R + +SL+S+Y KC AR +F++ +P +S+NA++SGY +
Sbjct: 312 VLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEK---MPAKDLVSWNALLSGYVSSGHI 367
Query: 145 ADAVSLFRRMRRED----------------GSSTVK---------FNFNSVTMLGLVSGC 179
+A +F+ M+ ++ G +K F G + C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 180 NLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWN 239
+ G H + G D+ L+ N+ +TMY KCG VE ARQ+F M D +SWN
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 240 AMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE-- 297
A+++ Q+GH A +++Y EM + + PD +TLL VL++C++ G G + +E
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 298 -QCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVS-WTA 341
+ G++ + LI++ R G + A +V + + K W A
Sbjct: 548 YRIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEA 591
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 157/389 (40%), Gaps = 79/389 (20%)
Query: 185 LPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM-------------- 230
L +HG +TFG ++N + +Y K E+ ARQLFDE+
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 231 -------------------LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPV 271
+RD + +NAM++G++ N + L+ +MK PD
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 272 TLLAVLSSCANLG-AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN----LARARA 326
T +VL+ A + + V+ + G G ++NAL+++Y++C + L AR
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 327 VFDGMVDKSVVSWT--------------------------------AXXXXXXXXXXXXX 354
VFD +++K SWT A
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY-SCL 413
A+E+ MV SG+ D + +V+ AC+ AGL G + R+ + H+ + L
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSL 326
Query: 414 VDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNI 473
V L + G+ EA + + M K D W ALL ++ A+L F+ E++ NI
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFK---EMKEKNI 382
Query: 474 -GYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
+ +++S + + EG+ M RE
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKRE 411
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 329/598 (55%), Gaps = 50/598 (8%)
Query: 85 LHAHVIRTGSQPDPYTRSSLI------SMYSK-CSLPFLARRVFDETHNLPI-SYNAMIS 136
+H ++RT D + S L+ S ++K +L A +F + N + +N +I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
+S + + A + +M + + +++T L+ + + G H V
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKS------RIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144
Query: 197 TFGLDADLAVMNSFLTMYV-------------------------------KCGEVELARQ 225
FG D+ V NS + MY KCG VE AR+
Sbjct: 145 RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENARE 204
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA 285
+FDEM R+L +W+ M++GYA+N + ++L+ MK + + +++V+SSCA+LGA
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
G + + N L AL++M+ RCG++ +A VF+G+ + +SW++
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 346 XXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP 405
A+ F +M+ G P F VLSACSH GL +KGL ++ M++ +G++P
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 384
Query: 406 GPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV 465
EHY C+VD+LGRAG+L EA + I M VKP+ + GALLGACKI+KN E+AE +
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML 444
Query: 466 IELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSG 525
I+++P + GYYVLLSNIY+ A + + +R MM+E+ ++K PG S +E GK++ F G
Sbjct: 445 IKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 504
Query: 526 -DRNHPQMKEIYRKVAELENSVMEI----HRPDEKYRVRSEELLNGNGVHSERLAIAFAL 580
D+ HP+M +I RK E+ + I + D + V EE + +HSE+LAIA+ +
Sbjct: 505 DDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGM 564
Query: 581 LSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+ T+PGT I I+KNLRVC DCH KL+S++ R+ I+RD RFHHFR+GVCSC+DYW
Sbjct: 565 MKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 186/441 (42%), Gaps = 51/441 (11%)
Query: 26 NPTT-AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
NP +NL + S + +A Y ML+S K+ + + L G Q
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYS-------------------------------KCSL 113
H+ ++R G Q D Y +SL+ MY+ KC +
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 114 PFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTM 172
AR +FDE H +++ MI+GY+ N+ F A+ LF M+RE + N M
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA------NETVM 252
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV 232
+ ++S C L G + V + +L + + + M+ +CG++E A +F+ +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 233 RDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEV 292
D +SW++++ G A +GHA + + + +M P VT AVLS+C++ G G+E+
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 293 ERKIEQCGFGSNPFLTN--ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
+++ G P L + +++M R G LA A M K
Sbjct: 373 YENMKK-DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLS---ACSHAGLTDKGLHYFDEMERKYGLQPGP 407
E M+ V+P+ + + +LS AC AG DK D M+ K L P
Sbjct: 432 KNTEVAERVGNMLIK-VKPEHSGYYVLLSNIYAC--AGQWDKIESLRDMMKEK--LVKKP 486
Query: 408 EHYSCLVDLLGRAGRLKEAMD 428
+S L+++ G+ + D
Sbjct: 487 PGWS-LIEIDGKINKFTMGDD 506
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/580 (38%), Positives = 312/580 (53%), Gaps = 32/580 (5%)
Query: 84 QLHAHVIRTGSQPDPYT---RSSLISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYS 139
QLHA +RT +P T ++ + S S A RVFD N +N +I +
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 140 LN-SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ S +A L+R+M SS K F V + C G +H V
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFV-----LKACAYIFGFSEGKQVHCQIVKH 180
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G D+ V N + +Y CG ++LAR++FDEM R L+SWN+M+ + G L+L+
Sbjct: 181 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 240
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE----RKIEQCGFGSNPFLTNALINM 314
EM+ R PD T+ +VLS+CA LG+ +G RK + + + N+LI M
Sbjct: 241 REMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD-VDVAMDVLVKNSLIEM 298
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV--RSGVRPDRT 372
Y +CG+L A VF GM + + SW A A+ FD MV R VRP+
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSV 358
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
FV +L AC+H G +KG YFD M R Y ++P EHY C+VDL+ RAG + EA+D++ S
Sbjct: 359 TFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMS 418
Query: 433 MKVKPDGAVWGALLGAC-KIHKNVELAELAFEHVIELEPTN-------IGYYVLLSNIYS 484
M +KPD +W +LL AC K +VEL+E ++I + N G YVLLS +Y+
Sbjct: 419 MPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYA 478
Query: 485 DAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELEN 544
A V VR +M E +RK+PGCS +E G H F++GD +HPQ K+IY+++ +++
Sbjct: 479 SASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDD 538
Query: 545 SVMEI-HRPDEKYRVRSEELLNGNG-----VHSERLAIAFALLSTRPGTEITIMKNLRVC 598
+ I + PD + +G+ +HSERLAIAF L++ P T I I KNLRVC
Sbjct: 539 RLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVC 598
Query: 599 VDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
DCH KL+SK+ N + I+RD RFHHF+DG CSC DYW
Sbjct: 599 NDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 45 KEALSLYRHML-RSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSS 103
+EA LYR ML R K+CA + G Q+H +++ G D Y +
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 104 LISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSST 162
LI +Y C LAR+VFDE +S+N+MI + A+ LFR M+R
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR------ 245
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG-----CAVTFGLDADLAVMNSFLTMYVKC 217
F + TM ++S C L GT H C V + D+ V NS + MY KC
Sbjct: 246 -SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM--DVLVKNSLIEMYCKC 302
Query: 218 GEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR--MSPDPVTLLA 275
G + +A Q+F M RDL SWNAM+ G+A +G A + + M +R + P+ VT +
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 276 VLSSCANLG 284
+L +C + G
Sbjct: 363 LLIACNHRG 371
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 114/286 (39%), Gaps = 59/286 (20%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +WN + L + +Y AL L+R M RS + SL L G
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSL-GT 271
Query: 84 QLHAHVIR---TGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYS 139
HA ++R D ++SLI MY KC +A +VF + S+NAMI G++
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFA 331
Query: 140 LNSMFADAVSLFRRM--RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
+ +A++ F RM +RE+ NSVT +GL+ CN
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRP------NSVTFVGLLIACN----------------- 368
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD------LISWNAMVSGYAQNGHA 251
G V RQ FD M+VRD L + +V A+ G+
Sbjct: 369 ------------------HRGFVNKGRQYFD-MMVRDYCIEPALEHYGCIVDLIARAGYI 409
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV-VGVEVERKI 296
+++ M M PD V ++L +C GA V + E+ R I
Sbjct: 410 TEAIDMVMSMP---MKPDAVIWRSLLDACCKKGASVELSEEIARNI 452
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 316/595 (53%), Gaps = 47/595 (7%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNL----------- 127
G Q+H VI+ G + S L+ MY+ A++VF D+ + +
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 128 -----------------PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSV 170
+S+ AMI G + N + +A+ FR M+ + G ++ F SV
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSV 276
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
+ C + G +H C + + V ++ + MY KC + A+ +FD M
Sbjct: 277 -----LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 231 LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGV 290
++++SW AMV GY Q G A ++++ +M+ + PD TL +S+CAN+ + G
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
+ K G ++N+L+ +Y +CG++ + +F+ M + VSWTA
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
++LFD+MV+ G++PD V+SACS AGL +KG YF M +YG+ P HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
SC++DL R+GRL+EAM I M PD W LL AC+ N+E+ + A E +IEL+P
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 471 TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
+ Y LLS+IY+ + V ++R MRE+ ++K+PG S++++KGK+H F + D + P
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Query: 531 QMKEIYRKVAELENSVMEI-HRPDEKYRVRSEE------LLNGNGVHSERLAIAFALLST 583
+ +IY K+ EL N +++ ++PD + E +LN HSERLAIAF L+
Sbjct: 632 YLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLN---YHSERLAIAFGLIFV 688
Query: 584 RPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
G I + KNLRVCVDCH K +S + R+ ++RDA RFH F+DG CSC D+W
Sbjct: 689 PSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 198/421 (47%), Gaps = 58/421 (13%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSMFADAVSL 150
QP+ ++ ++L+ YSK L F++ LP +++N +I GYSL+ + AV
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEK---LPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
+ M R+ N VT++ ++ + H+ G +HG + G ++ L V +
Sbjct: 126 YNTMMRD-----FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 211 LTMY-------------------------------VKCGEVELARQLFDEMLVRDLISWN 239
L MY + CG +E A QLF M +D +SW
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWA 239
Query: 240 AMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQC 299
AM+ G AQNG A +E + EMK++ + D +VL +C LGA G ++ I +
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 300 GFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELF 359
F + ++ +ALI+MY +C L A+ VFD M K+VVSWTA AV++F
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 360 DEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY----SCLVD 415
+M RSG+ PD +SAC++ ++G + + + G HY + LV
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVT 414
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA-CKIHKNVELAELAFEHVIE--LEPTN 472
L G+ G + ++ L M V+ D W A++ A + + VE +L F+ +++ L+P
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQL-FDKMVQHGLKPDG 472
Query: 473 I 473
+
Sbjct: 473 V 473
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 155/317 (48%), Gaps = 11/317 (3%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+ +W + L++ KEA+ +R M +C L G Q+HA
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFAD 146
+IRT Q Y S+LI MY KC A+ VFD +S+ AM+ GY +
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
AV +F M+R + + T+ +S C + L G+ HG A+T GL + V
Sbjct: 355 AVKIFLDMQRSG------IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
NS +T+Y KCG+++ + +LF+EM VRD +SW AMVS YAQ G A ++L+ +M +
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT--NALINMYARCGNLARA 324
PD VTL V+S+C+ G G + K+ +G P + + +I++++R G L A
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 325 RAVFDGM-VDKSVVSWT 340
+GM + WT
Sbjct: 528 MRFINGMPFPPDAIGWT 544
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/571 (38%), Positives = 318/571 (55%), Gaps = 30/571 (5%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS--------YNAMI 135
Q+HAH+I TG Y RS S+ +K + R TH L +S +N++I
Sbjct: 27 QVHAHLIVTG-----YGRSR--SLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVI 79
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
S + V+ +RRM + S + + F SV + C + L G +H A
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPS-NYTFTSV-----IKSCADLSALRIGKGVHCHA 133
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
V G D V + +T Y KCG++E ARQ+FD M + +++WN++VSG+ QNG A +
Sbjct: 134 VVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAI 193
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+++++M+ PD T +++LS+CA GA +G V + I G N L ALIN+Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS-GVRPDRTVF 374
+RCG++ +AR VFD M + +V +WTA AVELF++M G P+ F
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
V VLSAC+HAGL ++G + M + Y L PG EH+ C+VD+LGRAG L EA I +
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLD 373
Query: 435 VKPDG---AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEG 491
A+W A+LGACK+H+N +L + +I LEP N G++V+LSNIY+ + ++
Sbjct: 374 ATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDE 433
Query: 492 VLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-H 550
V +R M LRK G S +E + K ++F GD +H + EIYR + L + EI +
Sbjct: 434 VSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGY 493
Query: 551 RP---DEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKL 607
P + ++V EE HSE+LA+AF LL T ITI+KNLR+C DCH K
Sbjct: 494 APVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKY 552
Query: 608 VSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+S + NRQ +RD RFHHF++G CSC DYW
Sbjct: 553 ISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 190/387 (49%), Gaps = 22/387 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P+ +N + SK R ++ YR ML S+ KSCA LS G
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
+H H + +G D Y +++L++ YSKC AR+VFD I ++N+++SG+ N
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ +A+ +F +M RE G F +S T + L+S C + G+ +H ++ GLD
Sbjct: 188 LADEAIQVFYQM-RESG-----FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
++ + + + +Y +CG+V AR++FD+M ++ +W AM+S Y +G+ + +EL+++M+
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 263 LRRMSPDP--VTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARC 318
P P VT +AVLS+CA+ G G V +++ + + P + + +++M R
Sbjct: 302 -DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRA 359
Query: 319 GNLARARAVFDGMVDKSVVS-----WTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
G L A F +D + + WTA VE+ ++ + PD
Sbjct: 360 GFLDEAYK-FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI--ALEPDNPG 416
Query: 374 FVTVLSAC-SHAGLTDKGLHYFDEMER 399
+LS + +G TD+ H D M R
Sbjct: 417 HHVMLSNIYALSGKTDEVSHIRDGMMR 443
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 157/426 (36%), Gaps = 56/426 (13%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P AWN + + EA+ ++ M S +CA
Sbjct: 167 RMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSL 226
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G +H ++I G + ++LI++YS+C AR VFD+ + ++ AMIS Y
Sbjct: 227 GSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGT 286
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ AV LF +M ED + N+VT + ++S C
Sbjct: 287 HGYGQQAVELFNKM--EDDCGPIP---NNVTFVAVLSAC--------------------- 320
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEM-----LVRDLISWNAMVSGYAQNGHAARVL 255
G VE R ++ M L+ + MV + G
Sbjct: 321 --------------AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+ H++ + P A+L +C +GVE+ +++ NP L N+Y
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE-PDNPGHHVMLSNIY 425
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
A G + DGM+ ++ + + DE + R
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFS--MGDESHQETGEIYR-YLE 482
Query: 376 TVLSACSHAG---LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
T++S C G ++++ +H +E E+++ L+ E + LL + A+ ++K+
Sbjct: 483 TLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLL---KTVDVAITIVKN 539
Query: 433 MKVKPD 438
+++ D
Sbjct: 540 LRICED 545
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/614 (33%), Positives = 325/614 (52%), Gaps = 67/614 (10%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL--------PISYNAMI 135
Q+HA I++G D + ++ C+ L R D H + S+N +I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRF---CATSDLHHRDLDYAHKIFNQMPQRNCFSWNTII 97
Query: 136 SGYSLNSMFAD--AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG 193
G+S + A++LF M ++ +F F SV + C + G +HG
Sbjct: 98 RGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV-----LKACAKTGKIQEGKQIHG 152
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCG----------------------------------- 218
A+ +G D VM++ + MYV CG
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 219 ----------EVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + AR LFD+M R ++SWN M+SGY+ NG +E++ EMK + P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+ VTL++VL + + LG+ +G + E G + L +ALI+MY++CG + +A VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
+ + ++V++W+A A++ F +M ++GVRP ++ +L+ACSH GL +
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 389 KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
+G YF +M GL+P EHY C+VDLLGR+G L EA + I +M +KPD +W ALLGA
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Query: 449 CKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDP 508
C++ NVE+ + ++++ P + G YV LSN+Y+ N V +R+ M+E+ +RKDP
Sbjct: 453 CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512
Query: 509 GCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV-MEIHRPDEK---YRVRSEELL 564
GCS ++ G +H F D +HP+ KEI + E+ + + + +RP + E+
Sbjct: 513 GCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKE 572
Query: 565 NGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRF 624
N HSE++A AF L+ST PG I I+KNLR+C DCH +KL+SK+ R+ +RD RF
Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632
Query: 625 HHFRDGVCSCKDYW 638
HHF+DG CSC DYW
Sbjct: 633 HHFQDGSCSCMDYW 646
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 63/321 (19%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+WN + S +K+A+ ++R M + + + L G LH
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL 298
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSM 143
+ +G + D S+LI MYSKC + A VF+ LP I+++AMI+G++++
Sbjct: 299 YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER---LPRENVITWSAMINGFAIHGQ 355
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
DA+ F +MR+ + V + L++ C+ HG
Sbjct: 356 AGDAIDCFCKMRQAGVRPS------DVAYINLLTACS-----------HG---------- 388
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS-----WNAMVSGYAQNGHAARVLELY 258
G VE R+ F +M+ D + + MV ++G E
Sbjct: 389 --------------GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALI---NMY 315
M ++ PD V A+L +C G VE+ +++ P + A + NMY
Sbjct: 435 LNMPIK---PDDVIWKALLGACRMQG----NVEMGKRVANILMDMVPHDSGAYVALSNMY 487
Query: 316 ARCGNLARARAVFDGMVDKSV 336
A GN + + M +K +
Sbjct: 488 ASQGNWSEVSEMRLRMKEKDI 508
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/620 (34%), Positives = 330/620 (53%), Gaps = 18/620 (2%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
K+ P +WN + + +AL L M+ S +C
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMIS 136
G LH V+ +G + ++L+SMY K +RRV + +P +++NA+I
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ---MPRRDVVAWNALIG 419
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHL-PTGTCLHGCA 195
GY+ + A++ F+ MR E SS N +T++ ++S C LP L G LH
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSS------NYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
V+ G ++D V NS +TMY KCG++ ++ LF+ + R++I+WNAM++ A +GH VL
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 533
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+L +M+ +S D + LS+ A L G ++ + GF + F+ NA +MY
Sbjct: 534 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 593
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
++CG + + V++S+ SW F EM+ G++P FV
Sbjct: 594 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 653
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
++L+ACSH GL DKGL Y+D + R +GL+P EH C++DLLGR+GRL EA I M +
Sbjct: 654 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 713
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRV 495
KP+ VW +LL +CKIH N++ A E++ +LEP + YVL SN+++ E V V
Sbjct: 714 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENV 773
Query: 496 RVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME---IHRP 552
R M + ++K CS+V+ K KV F GDR HPQ EIY K+ +++ + E +
Sbjct: 774 RKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADT 833
Query: 553 DEKYRVRSEELLNGN-GVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKI 611
+ + EE N HSERLA+A+AL+ST G+ + I KNLR+C DCH K VS++
Sbjct: 834 SQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRV 893
Query: 612 VNRQFIIRDATRFHHFRDGV 631
+ R+ ++RD RFHHF G+
Sbjct: 894 IGRRIVLRDQYRFHHFERGL 913
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/551 (24%), Positives = 237/551 (43%), Gaps = 30/551 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCA-ILSLPLTG 82
PV +WN + + + Y E + +R M +C S+ G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLN 141
Q+H V ++G D Y ++++ +Y L +R+VF+E + + S+ +++ GYS
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ + +++ MR E V N NS++++ +S C L G + G V GL+
Sbjct: 122 GEPEEVIDIYKGMRGEG----VGCNENSMSLV--ISSCGLLKDESLGRQIIGQVVKSGLE 175
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ LAV NS ++M G V+ A +FD+M RD ISWN++ + YAQNGH ++ M
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ + T+ +LS ++ Q G + + + GF S + N L+ MYA G
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
A VF M K ++SW + A+ L M+ SG + F + L+AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 382 SHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
+KG LH + GL + LV + G+ G + E+ ++ M + D
Sbjct: 356 FTPDFFEKGRILHGLVVVS---GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDV 411
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
W AL+G ++ + A AF+ + +E + Y ++S VL ++
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQ-TMRVEGVSSNYITVVS-----------VLSACLLP 459
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVR 559
+ R P +Y+ G F S + + +Y K +L +S + D + +
Sbjct: 460 GDLLERGKPLHAYIVSAG----FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 515
Query: 560 SEELLNGNGVH 570
+L N H
Sbjct: 516 WNAMLAANAHH 526
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Query: 230 MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV-V 288
M VR+ +SWN M+SG + G +E + +M + P + +++++C G+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
GV+V + + G S+ +++ A++++Y G ++ +R VF+ M D++VVSWT+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
++++ M GV + V+S+C G ++ K GL+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV-VKSGLESKLA 179
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVE 456
+ L+ +LG G + A + M + D W ++ A + ++E
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIE 226
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 315/557 (56%), Gaps = 27/557 (4%)
Query: 97 DPYTRSSLISMYSKCSLPFLARRVFDETHNLPI----SYNAMISGYSLNSMFADAVSLFR 152
+P S LI+++S C LAR++FD+ + + + AM GYS N DA+ ++
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 153 RMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLT 212
M S NF+ L C L G +H V D V N L
Sbjct: 226 DML---CSFIEPGNFSISVAL---KACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLK 279
Query: 213 MYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVT 272
+Y++ G + AR++FD M R++++WN+++S ++ + L+ +M+ + T
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 273 LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
L +L +C+ + A + G E+ +I + + L N+L++MY +CG + +R VFD M+
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 333 DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLH 392
K + SW + LF+ M+ SGV PD FV +LS CS GLT+ GL
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 393 YFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIH 452
F+ M+ ++ + P EHY+CLVD+LGRAG++KEA+ +I++M KP ++WG+LL +C++H
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 453 KNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSY 512
NV + E+A + + LEP N G YV++SNIY+DAK + V ++R MM++R ++K+ GCS+
Sbjct: 520 GNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSW 579
Query: 513 VEYKGKVHVFYSGD----RNHPQMKEIYRKVAEL-------ENSVMEIHRPDEKYRVRSE 561
V+ K K+ +F +G RN + K+++ ++ E N+ + +H DE+ +
Sbjct: 580 VQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKA--- 636
Query: 562 ELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDA 621
N HSERLA ++L+ T G I I KNLRVC DCH +MK+VS++ R ++RD
Sbjct: 637 ---NWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDT 693
Query: 622 TRFHHFRDGVCSCKDYW 638
RFHHF DG+CSCKDYW
Sbjct: 694 KRFHHFVDGICSCKDYW 710
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 10/304 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
W + S+ ++AL +Y ML S K+C L G +HA ++
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVS 149
+ + D + L+ +Y + L AR+VFD + +++N++IS S + +
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
LFR+M+ E F+ T+ ++ C+ L TG +H + D+ ++NS
Sbjct: 324 LFRKMQEE------MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 377
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ MY KCGEVE +R++FD ML +DL SWN M++ YA NG+ V+ L+ M ++PD
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 437
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNLARARAV 327
+T +A+LS C++ G G+ + ++ + F +P L + L+++ R G + A V
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKV 496
Query: 328 FDGM 331
+ M
Sbjct: 497 IETM 500
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/653 (32%), Positives = 333/653 (50%), Gaps = 48/653 (7%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+ +N L +LS+ + + + Y+ + K+ + +S G +LH
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFAD 146
+ + DP+ + + MY+ C AR VFDE +H +++N MI Y + +
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A LF M+ + + + + +VS C ++ ++ + + D +
Sbjct: 196 AFKLFEEMKDSNVMP------DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 207 MNSFLTMYV-------------------------------KCGEVELARQLFDEMLVRDL 235
+ + +TMY KCG ++ A+ +FD+ +DL
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
+ W M+S Y ++ + L ++ EM + PD V++ +V+S+CANLG V
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 296 IEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXA 355
I G S + NALINMYA+CG L R VF+ M ++VVSW++ A
Sbjct: 370 IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDA 429
Query: 356 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
+ LF M + V P+ FV VL CSH+GL ++G F M +Y + P EHY C+VD
Sbjct: 430 LSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVD 489
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGY 475
L GRA L+EA+++I+SM V + +WG+L+ AC+IH +EL + A + ++ELEP + G
Sbjct: 490 LFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGA 549
Query: 476 YVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI 535
VL+SNIY+ + E V +R +M E+ + K+ G S ++ GK H F GD+ H Q EI
Sbjct: 550 LVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEI 609
Query: 536 YRKVAELENSV-MEIHRPD---EKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTE--- 588
Y K+ E+ + + + + PD V EE + HSE+LA+ F L++ E
Sbjct: 610 YAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDS 669
Query: 589 ---ITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
I I+KNLRVC DCH+F KLVSK+ R+ I+RD TRFH +++G+CSC+DYW
Sbjct: 670 CGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 183/431 (42%), Gaps = 43/431 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--ISYNAMISGYSLN 141
QLHAH++RT + +S+ S A VF + P I +N + S +
Sbjct: 30 QLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRS 89
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
S + ++R+R G + + L ++ + + L G LHG A
Sbjct: 90 SEPRATILFYQRIRHVGG------RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D V F+ MY CG + AR +FDEM RD+++WN M+ Y + G +L+ EM
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 262 KLRRMSPDPVTLLAVLSSCANLG-------------------------------AQVVGV 290
K + PD + L ++S+C G A +
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
++ R+ + N F++ A+++ Y++CG L A+ +FD K +V WT
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+ +F+EM SG++PD +V+SAC++ G+ DK + GL+
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSIN 382
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--L 468
+ L+++ + G L D+ + M + + W +++ A +H A F + + +
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 469 EPTNIGYYVLL 479
EP + + +L
Sbjct: 442 EPNEVTFVGVL 452
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 316/553 (57%), Gaps = 26/553 (4%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI----SYNAMISGYSLNSMFADAVSL 150
+PD ++ + ++S Y + A+ FD +P S+N MI+GY+ A L
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDR---MPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
F M + N V+ ++SG L + A G+ A A+
Sbjct: 178 FYSMMEK----------NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAM---- 223
Query: 211 LTMYVKCGEVELARQLFDEMLV-RDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+T Y+K +VELA +F +M V ++L++WNAM+SGY +N L+L+ M + P+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
L + L C+ L A +G ++ + + + ++ +LI+MY +CG L A +F+
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE 343
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
M K VV+W A A+ LF EM+ + +RPD FV VL AC+HAGL +
Sbjct: 344 VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNI 403
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
G+ YF+ M R Y ++P P+HY+C+VDLLGRAG+L+EA+ LI+SM +P AV+G LLGAC
Sbjct: 404 GMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Query: 450 KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPG 509
++HKNVELAE A E +++L N YV L+NIY+ E V RVR M+E + K PG
Sbjct: 464 RVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPG 523
Query: 510 CSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVRSEELLNGNG 568
S++E + KVH F S DR HP++ I++K+ ELE + ++P+ ++ + + E
Sbjct: 524 YSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEK 583
Query: 569 V---HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFH 625
+ HSE+LA+AF + G++I + KNLR+C DCH +K +S+I R+ I+RD TRFH
Sbjct: 584 LLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFH 643
Query: 626 HFRDGVCSCKDYW 638
HF+DG CSC DYW
Sbjct: 644 HFKDGSCSCGDYW 656
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+N + V+ G+++ A ++F M ++ I+WN+++ G +++ +R++E + +L
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAH---QLFDE 118
Query: 267 SPDPVTL-LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT----NALINMYARCGNL 321
P+P T ++ SC V V E+ Q F PF N +I YAR G +
Sbjct: 119 IPEPDTFSYNIMLSC-----YVRNVNFEKA--QSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 322 ARARAVFDGMVDKSVVSWTA 341
+AR +F M++K+ VSW A
Sbjct: 172 EKARELFYSMMEKNEVSWNA 191
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
WN + + + ++ L L+R ML C+ LS G Q+H
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADA 147
V ++ D +SLISMY KC A ++F+ +++NAMISGY+ + A
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
+ LFR M K + +T + ++ CN
Sbjct: 370 LCLFREMIDN------KIRPDWITFVAVLLACN 396
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 328/564 (58%), Gaps = 12/564 (2%)
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGY 138
+ G QLH +V+++G P ++LI+ YSK LPF +RR F+++ +++++IS +
Sbjct: 32 IKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCF 91
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ N + ++ ++M + ++ ++S C++ G +H ++
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI------GRSVHCLSMKT 145
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G DAD+ V +S + MY KCGE+ AR++FDEM R++++W+ M+ GYAQ G L L+
Sbjct: 146 GYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF 205
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
E ++ + + +V+S CAN +G ++ + F S+ F+ ++L+++Y++C
Sbjct: 206 KEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKC 265
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G A VF+ + K++ W A +ELF M SG++P+ F+ VL
Sbjct: 266 GVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVL 325
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
+ACSHAGL D+G +YFD+M ++ ++P +HY+ LVD+LGRAGRL+EA+++I +M + P
Sbjct: 326 NACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPT 384
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
+VWGALL +C +HKN ELA A + V EL P + G ++ LSN Y+ E + R +
Sbjct: 385 ESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYR 557
+R+R +K+ G S+VE + KVH F +G+R H + KEIY K+AEL + + + D Y
Sbjct: 445 LRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYV 504
Query: 558 VRSEELLNGNGV---HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNR 614
+R + N HSERLAIAF L++ I +MKNLRVC DCH +K +S R
Sbjct: 505 LREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRR 564
Query: 615 QFIIRDATRFHHFRDGVCSCKDYW 638
I+RD RFH F DG CSC DYW
Sbjct: 565 VIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 144/273 (52%), Gaps = 8/273 (2%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPI 129
KSCAILS G +H ++TG D + SSL+ MY+KC AR++FDE +
Sbjct: 124 KSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVV 183
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
+++ M+ GY+ +A+ LF+ E+ + ++F+SV +S C L G
Sbjct: 184 TWSGMMYGYAQMGENEEALWLFKEALFENLAVN-DYSFSSV-----ISVCANSTLLELGR 237
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
+HG ++ D+ V +S +++Y KCG E A Q+F+E+ V++L WNAM+ YAQ+
Sbjct: 238 QIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHS 297
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
H +V+EL+ MKL M P+ +T L VL++C++ G G ++++
Sbjct: 298 HTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYA 357
Query: 310 ALINMYARCGNLARARAVFDGM-VDKSVVSWTA 341
+L++M R G L A V M +D + W A
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/593 (34%), Positives = 319/593 (53%), Gaps = 42/593 (7%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL--ARRVFDETHNLPI-SYNAMISGYSL 140
Q+HA + G+ D + + + +L A ++ D + + + N+MI +
Sbjct: 24 QIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCK 83
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ + + +RR+ SS ++ T+ LV C TG +HG + G
Sbjct: 84 SPVPEKSFDFYRRIL----SSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 201 DADLAVMNSFLTMYV-------------------------------KCGEVELARQLFDE 229
D D V +++Y +CG+V AR+LF+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 230 MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG 289
M RD I+WNAM+SGYAQ G + L ++H M+L + + V +++VLS+C LGA G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 290 VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
IE+ L L+++YA+CG++ +A VF GM +K+V +W++
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
+ELF M + GV P+ FV+VL CS G D+G +FD M ++G++P EH
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
Y CLVDL RAGRL++A+ +I+ M +KP AVW +LL A +++KN+EL LA + ++ELE
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
Query: 470 PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNH 529
N G YVLLSNIY+D+ + + V VR M+ + +RK PGCS +E G+VH F+ GD++H
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 530 PQMKEIYRKVAELENSV-MEIHRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRP 585
P+ +I ++ + + ++ D + + EE + +HSE+ AIAF ++S +
Sbjct: 500 PKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKE 559
Query: 586 GTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
I I+KNLRVC DCH ++SKI NR+ I+RD RFHHF+DG CSC +W
Sbjct: 560 DVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 49/299 (16%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMY---------------------- 108
++C L + TG Q+H IR G DP+ ++ LIS+Y
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 109 ---------SKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRRED 158
++C AR++F+ PI++NAMISGY+ +A+++F M+ E
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE- 234
Query: 159 GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCG 218
N V M+ ++S C L G H + + + + + +Y KCG
Sbjct: 235 -----GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 219 EVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLS 278
++E A ++F M +++ +W++ ++G A NG + LEL+ MK ++P+ VT ++VL
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 279 SCANLGAQVVGV--EVERKIEQC--GFGSNPFLTN--ALINMYARCGNLARARAVFDGM 331
C+ VVG E +R + FG P L + L+++YAR G L A ++ M
Sbjct: 350 GCS-----VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 301/553 (54%), Gaps = 63/553 (11%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+ A I+ S+N + A L+ ++ + N N T L+ C+ +G
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSE------INPNEFTFSSLLKSCSTK----SGKL 147
Query: 191 LHGCAVTFGLDAD-------------------------------LAVMNSFLTMYVKCGE 219
+H + FGL D L + +T Y K G
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR-RMSPDPVTLLAVLS 278
VE AR LFD M RD++SWN M+ GYAQ+G L L+ ++ + PD +T++A LS
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 279 SCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVS 338
+C+ +GA G + ++ N + LI+MY++CG+L A VF+ K +V+
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 339 WTAXXXXXXXXXXXXXAVELFDEMVR-SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEM 397
W A A+ LF+EM +G++P F+ L AC+HAGL ++G+ F+ M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 398 ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVEL 457
++YG++P EHY CLV LLGRAG+LK A + IK+M + D +W ++LG+CK+H + L
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVL 447
Query: 458 AELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKG 517
+ E++I L N G YVLLSNIY+ + EGV +VR +M+E+ + K+PG S +E +
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 507
Query: 518 KVHVFYSGDRNHPQMKEIY---RKVAEL---------ENSVMEIHRPDEKYRVRSEELLN 565
KVH F +GDR H + KEIY RK++E N+V++ EK E+ L
Sbjct: 508 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEK-----EQSLQ 562
Query: 566 GNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFH 625
VHSERLAIA+ L+ST+PG+ + I KNLRVC DCH KL+SKI R+ ++RD RFH
Sbjct: 563 ---VHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 626 HFRDGVCSCKDYW 638
HF DG CSC D+W
Sbjct: 620 HFTDGSCSCGDFW 632
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
+A LY +L S KSC+ S G +H HV++ G DPY + L+
Sbjct: 113 QAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLV 168
Query: 106 SMYSKCSLPFLARRVFD------------------ETHNLP--------------ISYNA 133
+Y+K A++VFD + N+ +S+N
Sbjct: 169 DVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNV 228
Query: 134 MISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG 193
MI GY+ + DA+ LF+++ E K + +T++ +S C+ L TG +H
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEG-----KPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAAR 253
+ + ++ V + MY KCG +E A +F++ +D+++WNAM++GYA +G++
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 254 VLELYHEMK-LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--A 310
L L++EM+ + + P +T + L +CA+ G G+ + + Q +G P + +
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ-EYGIKPKIEHYGC 402
Query: 311 LINMYARCGNLARARAVFDGM-VDKSVVSWTA 341
L+++ R G L RA M +D V W++
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSS 434
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 45/329 (13%)
Query: 214 YVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
Y G++ + LF + + DL + A ++ + NG + LY ++ ++P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
++L SC+ +++ V + G G +P++ L+++YA+ G++ A+ VFD M +
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLK----FGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV-------------------------- 367
+S+VS TA A LFD M +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 368 ------RPDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGR 419
+PD V LSACS G + G +H F + R ++ + + L+D+ +
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR---IRLNVKVCTGLIDMYSK 306
Query: 420 AGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF---EHVIELEPTNIGYY 476
G L+EA+ L+ + + D W A++ +H + A F + + L+PT+I +
Sbjct: 307 CGSLEEAV-LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 477 VLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
L +EG+ M +E ++
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIK 394
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 122/311 (39%), Gaps = 43/311 (13%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHML-RSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN+ + ++ +AL L++ +L +C+ + TG +H
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADA 147
V + + + + LI MYSKC A VF++T I ++NAMI+GY+++ DA
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ LF M+ G +T +G + C A ++
Sbjct: 345 LRLFNEMQGITG-----LQPTDITFIGTLQAC----------------------AHAGLV 377
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLIS-WNAMVSGYAQNGHAARVLELYHEMKLRRM 266
N + ++ G+ E ++ I + +VS + G R Y +K M
Sbjct: 378 NEGIRIFESMGQ---------EYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKNMNM 425
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
D V +VL SC G V+G E+ + N + L N+YA G+
Sbjct: 426 DADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI-KNSGIYVLLSNIYASVGDYEGVAK 484
Query: 327 VFDGMVDKSVV 337
V + M +K +V
Sbjct: 485 VRNLMKEKGIV 495
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 324/561 (57%), Gaps = 12/561 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
+LH + ++ + ++ ++ Y+KC A+RVF + + S+NA+I G++ ++
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
++ +M+ +S T+ L+S C+ L G +HG + L+
Sbjct: 476 DPRLSLDAHLQMK------ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
DL V S L++Y+ CGE+ + LFD M + L+SWN +++GY QNG R L ++ +M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
L + ++++ V +C+ L + +G E + + F+ +LI+MYA+ G++
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
++ VF+G+ +KS SW A A++LF+EM R+G PD F+ VL+AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI-KSMKVKPDGAV 441
H+GL +GL Y D+M+ +GL+P +HY+C++D+LGRAG+L +A+ ++ + M + D +
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 442 WGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
W +LL +C+IH+N+E+ E + ELEP YVLLSN+Y+ E V +VR M E
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 502 RKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDE---KYR 557
LRKD GCS++E KV F G+R +EI + LE + ++ +RPD ++
Sbjct: 830 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHD 889
Query: 558 VRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFI 617
+ EE + HSE+LA+ + L+ T GT I + KNLR+CVDCH KL+SK++ R+ +
Sbjct: 890 LSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIV 949
Query: 618 IRDATRFHHFRDGVCSCKDYW 638
+RD RFHHF++GVCSC DYW
Sbjct: 950 VRDNKRFHHFKNGVCSCGDYW 970
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 164/357 (45%), Gaps = 8/357 (2%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXX-XXXKSCAILSLPLTGFQLHAHV 89
WN + S+ Y E L + M+ ++ K+CA +S G +H V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADA 147
++TG D + ++L+S Y A ++FD NL +S+N+MI +S N ++
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL-VSWNSMIRVFSDNGFSEES 272
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
L M E+G F + T++ ++ C + G +HG AV LD +L +
Sbjct: 273 FLLLGEMMEENGDGA--FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN 330
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL--RR 265
N+ + MY KCG + A+ +F ++++SWN MV G++ G ++ +M
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ D VT+L + C + E+ + F N + NA + YA+CG+L+ A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
VF G+ K+V SW A +++ +M SG+ PD ++LSACS
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 145/312 (46%), Gaps = 27/312 (8%)
Query: 88 HVIRTGS---QPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNS 142
H + +GS + D + +I+MY+ C P +R VFD + NL +NA+IS YS N
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL-FQWNAVISSYSRNE 165
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
++ + + F M ST + T ++ C + + G +HG V GL
Sbjct: 166 LYDEVLETFIEM-----ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE 220
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D+ V N+ ++ Y G V A QLFD M R+L+SWN+M+ ++ NG + L EM
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 263 LRR----MSPDPVTLLAVLSSCA-----NLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
PD TL+ VL CA LG V G V+ ++++ L NAL++
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK-----ELVLNNALMD 335
Query: 314 MYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG--VRPDR 371
MY++CG + A+ +F +K+VVSW ++ +M+ G V+ D
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 372 TVFVTVLSACSH 383
+ + C H
Sbjct: 396 VTILNAVPVCFH 407
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-IS 130
+C+ L G ++H +IR + D + S++S+Y C + +FD + +S
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+N +I+GY N A+ +FR+M ++M+ + C+L L G
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQM------VLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
H A+ L+ D + S + MY K G + + ++F+ + + SWNAM+ GY +G
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ--CGFGSNPFLT 308
A ++L+ EM+ +PD +T L VL++C + G G+ R ++Q FG P L
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL---RYLDQMKSSFGLKPNLK 735
Query: 309 N--ALINMYARCGNLARA-RAVFDGMVDKSVV 337
+ +I+M R G L +A R V + M +++ V
Sbjct: 736 HYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L D + +TMY CG + +R +FD + ++L WNA++S Y++N VLE +
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 260 EM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
EM + PD T V+ +CA + +G+ V + + G + F+ NAL++ Y
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR----SGVRPDRTVF 374
G + A +FD M ++++VSW + + L EM+ PD
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYS-------------CLVDLLGRAG 421
VTVL C+ ER+ GL G ++ L+D+ + G
Sbjct: 296 VTVLPVCAR--------------EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 422 RLKEAMDLIKSMKVKPDGAVWGALLGA 448
+ A +I M + W ++G
Sbjct: 342 CITNA-QMIFKMNNNKNVVSWNTMVGG 367
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 331/626 (52%), Gaps = 24/626 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +WN + +L L++ ML+ +C+ + P G
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 84 QLHAHVIRTGSQP-DPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLN 141
++H H +R+ + D +S++ MYSK A R+F+ I ++N MI Y+ N
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
DA F++M ++G + +T + L+ + + G +HG A+ G
Sbjct: 312 GRVTDAFLCFQKMSEQNG-----LQPDVITSINLLPA----SAILEGRTIHGYAMRRGFL 362
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ + + + MY +CG+++ A +FD M +++ISWN++++ Y QNG LEL+ E+
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ PD T+ ++L + A + G E+ I + + SN + N+L++MYA CG+L
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
AR F+ ++ K VVSW + +V LF EM+ S V P+++ F ++L+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV 441
S +G+ D+G YF+ M+R+YG+ PG EHY C++DL+GR G A ++ M P +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 442 WGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
WG+LL A + HK++ +AE A E + ++E N G YVLL N+Y++A E V R++++M
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 502 RKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME----IH-----RP 552
+ + + S VE KGK HVF +GDR+H +IY + + V E +H RP
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRP 722
Query: 553 DEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIV 612
+ + RS N HS RLA F L+ST G +T+ N R+C CH F++ S++
Sbjct: 723 ETLVKSRS----NSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLT 778
Query: 613 NRQFIIRDATRFHHFRDGVCSCKDYW 638
R+ ++ D+ FHHF +G CSC +YW
Sbjct: 779 RREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 223/488 (45%), Gaps = 27/488 (5%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN+ + + Y EA+ Y M+ + KS A +S G ++HA VI
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGY-SLNSMFADAV 148
+ G D Y +SLIS+Y K + A +VF+E I S+N+MISGY +L F+ ++
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS-SL 216
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD-ADLAVM 207
LF+ M + F + + + + C+ G +H AV ++ D+ VM
Sbjct: 217 MLFKEMLK------CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVM 270
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR-M 266
S L MY K GEV A ++F+ M+ R++++WN M+ YA+NG + +M + +
Sbjct: 271 TSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL 330
Query: 267 SPDPVTLLAVLSSCANL-GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
PD +T + +L + A L G + G + R GF + L ALI+MY CG L A
Sbjct: 331 QPDVITSINLLPASAILEGRTIHGYAMRR-----GFLPHMVLETALIDMYGECGQLKSAE 385
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
+FD M +K+V+SW + A+ELF E+ S + PD T ++L A + +
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 386 LTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
+G +H + R + + LV + G L++A + +K D W
Sbjct: 446 SLSEGREIHAYIVKSRYW---SNTIILNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWN 501
Query: 444 ALLGACKIHKNVELAELAFEHVI--ELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
+++ A +H ++ F +I + P + LL+ EG M RE
Sbjct: 502 SIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKRE 561
Query: 502 RKLRKDPG 509
+ DPG
Sbjct: 562 YGI--DPG 567
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 166/340 (48%), Gaps = 25/340 (7%)
Query: 117 ARRVFDETHNL-PISYNAMISGYSLNSMFADAVSLFRRMRRED-GSSTVKFNFNSVTMLG 174
A ++FDE + +N MI G++ ++ +AV + RM + T + F ++ G
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
+ S L G +H + G +D+ V NS +++Y+K G A ++F+EM RD
Sbjct: 143 ISS-------LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE--- 291
++SWN+M+SGY G L L+ EM PD + ++ L +C+++ + +G E
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 292 --VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
V +IE + + ++++MY++ G ++ A +F+GM+ +++V+W
Sbjct: 256 HAVRSRIET----GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 350 XXXXXAVELFDEMV-RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A F +M ++G++PD + +L A A L + +H + M R G P
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPA--SAILEGRTIHGY-AMRR--GFLPHMV 366
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
+ L+D+ G G+LK A + M K + W +++ A
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAA 405
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 4/263 (1%)
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+E A QLFDEM D WN M+ G+ G ++ Y M + D T V+ S
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSW 339
A + + G ++ + + GF S+ ++ N+LI++Y + G A VF+ M ++ +VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 340 TAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
+ ++ LF EM++ G +PDR ++ L ACSH G R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 400 KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAE 459
+ ++D+ + G + A + M ++ + W ++G + V A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 460 LAFEHVIE---LEPTNIGYYVLL 479
L F+ + E L+P I LL
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLL 341
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 323/599 (53%), Gaps = 12/599 (2%)
Query: 46 EALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSL 104
E L L++ M S KSC+ G Q H ++ G + R++L
Sbjct: 118 EVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTL 177
Query: 105 ISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
+ MYS CS A RV D+ +S +++ +SGY F + + + R+ ED
Sbjct: 178 VYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANED----- 232
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
F +N++T L + + L +H V FG +A++ + + MY KCG+V A
Sbjct: 233 -FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYA 291
Query: 224 RQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANL 283
+++FD+ +++ ++ Y Q+ L L+ +M + + P+ T +L+S A L
Sbjct: 292 QRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAEL 351
Query: 284 GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXX 343
G + + + G+ ++ + NAL+NMYA+ G++ AR F GM + +V+W
Sbjct: 352 SLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMI 411
Query: 344 XXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGL 403
A+E FD M+ +G P+R F+ VL ACSH G ++GLHYF+++ +K+ +
Sbjct: 412 SGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDV 471
Query: 404 QPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFE 463
QP +HY+C+V LL +AG K+A D +++ ++ D W LL AC + +N L + E
Sbjct: 472 QPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE 531
Query: 464 HVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFY 523
+ IE P + G YVLLSNI++ ++ EGV +VR +M R ++K+PG S++ + + HVF
Sbjct: 532 YAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFL 591
Query: 524 SGDRNHPQMKEIYRKVAELENSVMEI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFA 579
+ D HP++ IY KV E+ + + + + PD + V E+ + HSE+LA+A+
Sbjct: 592 AEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYG 651
Query: 580 LLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
L+ T + + + KN+R+C DCH +KL+SKI R +IRD+ RFHHF DG CSC DYW
Sbjct: 652 LIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 178/405 (43%), Gaps = 21/405 (5%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQP---DPYTRSSLISMYSKCSLPFLARRVFD--ETH 125
K CA S G +HAH+I T D Y +SLI++Y KC AR++FD
Sbjct: 39 KVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPER 98
Query: 126 NLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHL 185
N+ +S+ AM+ GY + + + LF+ M S N + C+ +
Sbjct: 99 NV-VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRP-----NEFVATVVFKSCSNSGRI 152
Query: 186 PTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGY 245
G HGC + +GL + V N+ + MY C A ++ D++ DL +++ +SGY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 246 AQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ G L++ + + +T L+ L +NL + ++V ++ + GF +
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
ALINMY +CG + A+ VFD +++ T A+ LF +M
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY----SCLVDLLGRAG 421
V P+ F +L++ + L +G ++ L+ G ++ + LV++ ++G
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQG-----DLLHGLVLKSGYRNHVMVGNALVNMYAKSG 387
Query: 422 RLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI 466
+++A M + D W ++ C H A AF+ +I
Sbjct: 388 SIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRMI 431
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDA---DLAVMNSFLTMYVKCGEVELARQLFDEML 231
L+ C ++L G +H + + D +NS + +YVKC E AR+LFD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS-PDPVTLLAVLSSCANLGAQVVGV 290
R+++SW AM+ GY +G VL+L+ M S P+ V SC+N G G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM--VDKSVVS 338
+ + G S+ F+ N L+ MY+ C A V D + D SV S
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 265 RMSPDPVTLL-AVLSSCANLGAQVVGVEVERKI---EQCGFGSNPFLTNALINMYARCGN 320
+ +P P+ L +L CAN +G + + Q + + N+LIN+Y +C
Sbjct: 25 KKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRE 84
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLS 379
RAR +FD M +++VVSW A ++LF M SG RP+ V V
Sbjct: 85 TVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFK 144
Query: 380 ACSHAGLTDKGLHYFDEMERKYGL 403
+CS++G ++G F KYGL
Sbjct: 145 SCSNSGRIEEGKQ-FHGCFLKYGL 167
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 319/574 (55%), Gaps = 30/574 (5%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNLPISYNAMISGYSL 140
QLH + G ++ ++ YSK L A VF DE + +S+N+MI Y
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD-EVSWNSMIVAYGQ 217
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ A A++L++ M + F + T+ +++ +HL G HG + G
Sbjct: 218 HKEGAKALALYKEMIFKG------FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 201 DADLAVMNSFLTMYVKCGEVE---LARQLFDEMLVRDLISWNAMVSGYAQNGH-AARVLE 256
+ V + + Y KCG + + ++F E+L DL+ WN M+SGY+ N + ++
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVK 331
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGA-----QVVGVEVERKIEQCGFGSNPFLTNAL 311
+ +M+ PD + + V S+C+NL + Q+ G+ ++ I N NAL
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN----NAL 387
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
I++Y + GNL AR VFD M + + VS+ A+ L+ M+ SG+ P++
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
FV VLSAC+H G D+G YF+ M+ + ++P EHYSC++DLLGRAG+L+EA I
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 432 SMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEG 491
+M KP W ALLGAC+ HKN+ LAE A ++ ++P YV+L+N+Y+DA+ E
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEE 567
Query: 492 VLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-H 550
+ VR MR +++RK PGCS++E K K HVF + D +HP ++E+ + E+ + ++ +
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Query: 551 RPDEKYRVRSEELLNGN------GVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIF 604
D+K+ + E+ G HSE+LA+AF L+STR G E+ ++KNLR+C DCH
Sbjct: 628 VMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNA 687
Query: 605 MKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+K +S + R+ I+RD RFH F+DG CSC DYW
Sbjct: 688 IKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 49/343 (14%)
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKC---------------------------- 111
TG LHA +++ Y + +++YSKC
Sbjct: 25 FTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84
Query: 112 ---SLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNF 167
S +AR++FDE +SYN +ISGY+ A+ LF+RMR+ + F
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK------LGFEV 138
Query: 168 NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLF 227
+ T+ GL++ C + + LH +V+ G D+ +V N+F+T Y K G + A +F
Sbjct: 139 DGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 228 ---DEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
DE+ RD +SWN+M+ Y Q+ A+ L LY EM + D TL +VL++ +L
Sbjct: 197 YGMDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG---NLARARAVFDGMVDKSVVSW-T 340
+ G + K+ + GF N + + LI+ Y++CG + + VF ++ +V W T
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT 314
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
AV+ F +M R G RPD FV V SACS+
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 157/322 (48%), Gaps = 16/322 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN ++ + ++ +AL+LY+ M+ + L + G Q H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 89 VIRTGSQPDPYTRSSLISMYSK---CSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMF 144
+I+ G + + S LI YSK C + + +VF E + + +N MISGYS+N
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 145 A-DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+ +AV FR+M+R + + + + + S C+ + +HG A+ + ++
Sbjct: 326 SEEAVKSFRQMQR------IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSN 379
Query: 204 -LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
++V N+ +++Y K G ++ AR +FD M + +S+N M+ GYAQ+GH L LY M
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT--NALINMYARCGN 320
++P+ +T +AVLS+CA+ G G E +++ F P + +I++ R G
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET-FKIEPEAEHYSCMIDLLGRAGK 498
Query: 321 LARARAVFDGMVDK-SVVSWTA 341
L A D M K V+W A
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAA 520
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 14/268 (5%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
N + Y K ++ +ARQLFDE+ D +S+N ++SGYA + L+ M+
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 268 PDPVTLLAVLSSC---ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
D TL ++++C +L Q+ V GF S + NA + Y++ G L A
Sbjct: 138 VDGFTLSGLIAACCDRVDLIKQLHCFSVSG-----GFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 325 RAVFDGMVD-KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
+VF GM + + VSW + A+ L+ EM+ G + D +VL+A +
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK--VKPDGAV 441
G + ++ K G S L+D + G D K + + PD V
Sbjct: 253 LDHLIGGRQFHGKL-IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 442 WGALLGACKIHKNVELAELAFEHVIELE 469
W ++ + N EL+E A + +++
Sbjct: 312 WNTMISGYSM--NEELSEEAVKSFRQMQ 337
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 324/603 (53%), Gaps = 56/603 (9%)
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYS 139
T LHAH+++ G ++L+++Y KC A +VFDE H I++ ++++ +
Sbjct: 21 TAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALN 80
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
++ +S+F + G F F++ LV C + G +H +
Sbjct: 81 QANLSGKTLSVFSSVGSSSGLRPDDFVFSA-----LVKACANLGSIDHGRQVHCHFIVSE 135
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
D V +S + MY KCG + A+ +FD + V++ ISW AMVSGYA++G LEL+
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 260 -------------------------------EMKLRRMSP-DPVTLLAVLSSCANLGAQV 287
EM+ R+ DP+ L +++ +CANL A +
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
G +V + GF S F++NALI+MYA+C ++ A+ +F M + VVSWT+
Sbjct: 256 AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A+ L+D+MV GV+P+ FV ++ ACSH G +KG F M + YG++P
Sbjct: 316 QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 375
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI- 466
+HY+CL+DLLGR+G L EA +LI +M PD W ALL ACK ++ +H++
Sbjct: 376 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Query: 467 ELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGD 526
+ + Y+LLSNIY+ A V R + E ++RKDPG S VE + + VFY+G+
Sbjct: 436 SFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGE 495
Query: 527 RNHPQMKEIYRKVAELE-----------NSVMEIHRPDEKYRVRSEELLNGNGVHSERLA 575
+HP ++I+R + +LE ++ +H DE+ + E+LL HSER A
Sbjct: 496 TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEK---EKLLFW---HSERSA 549
Query: 576 IAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCK 635
+A+ LL PGT I I+KNLRVC DCH+ +K +S+I R+ I+RDATR+HHF+ G CSC
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 636 DYW 638
D+W
Sbjct: 610 DFW 612
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 174/401 (43%), Gaps = 70/401 (17%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH-NLPI 129
K+CA L G Q+H H I + D +SSL+ MY+KC L A+ VFD I
Sbjct: 113 KACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTI 172
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRRED--------------GSSTVKFN--------- 166
S+ AM+SGY+ + +A+ LFR + ++ G F+
Sbjct: 173 SWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
Query: 167 ---FNSVTMLGLVSGC-NLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
+ + + +V C NL + G +HG + G D+ + + N+ + MY KC +V
Sbjct: 233 VDILDPLVLSSIVGACANLAASI-AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
A+ +F M RD++SW +++ G AQ+G A + L LY +M + P+ VT + ++ +C++
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSH 351
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNLARARAVFDGMVDKSVVSWT 340
+G G E+ + + + +G P L + L+++ R G L A + M
Sbjct: 352 VGFVEKGRELFQSMTK-DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM--------- 401
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERK 400
PD + +LSAC G G+ D +
Sbjct: 402 -------------------------PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Query: 401 YGLQPGPEHYSCLVDLLGRA---GRLKEAMDLIKSMKVKPD 438
+ L+ P Y L ++ A G++ EA + M+V+ D
Sbjct: 437 FKLKD-PSTYILLSNIYASASLWGKVSEARRKLGEMEVRKD 476
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 14/288 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXX-XXXXXXXKSCAILSLPLTG 82
PV +W + + + EA S++ M R +CA L+ + G
Sbjct: 198 PVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAG 257
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLN 141
Q+H VI G + ++LI MY+KCS A+ +F H +S+ ++I G + +
Sbjct: 258 RQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL-HGCAVTFGL 200
A++L+ M S VK N VT +GL+ C+ + G L +G+
Sbjct: 318 GQAEKALALYDDMV----SHGVK--PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGI 371
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEM-LVRDLISWNAMVSGYAQNGHAARVLELYH 259
L L + + G ++ A L M D +W A++S + G + +
Sbjct: 372 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD 431
Query: 260 EMKLRRMSPDPVT--LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ DP T LL+ + + A+L +V E RK+ + +P
Sbjct: 432 HLVSSFKLKDPSTYILLSNIYASASLWGKV--SEARRKLGEMEVRKDP 477
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 291/528 (55%), Gaps = 20/528 (3%)
Query: 117 ARRVFDETHNLPI-SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
AR +FDE + ++ MI+GY N+ A LF M + V+ +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----------TEVSWTSM 240
Query: 176 VSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL 235
+ G L + + N+ + + + GE+ AR++FD M RD
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPM----KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDN 296
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
+W M+ Y + G L+L+ +M+ + + P +L+++LS CA L + G +V
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 296 IEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXA 355
+ +C F + ++ + L+ MY +CG L +A+ VFD K ++ W + A
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 356 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
+++F EM SG P++ + +L+ACS+AG ++GL F+ ME K+ + P EHYSC VD
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGY 475
+LGRAG++ +AM+LI+SM +KPD VWGALLGACK H ++LAE+A + + E EP N G
Sbjct: 477 MLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGT 536
Query: 476 YVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGD-RNHPQMKE 534
YVLLS+I + V VR MR + K PGCS++E KVH+F G +NHP+
Sbjct: 537 YVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Query: 535 IYRKVAELENSVMEI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEIT 590
I + + + + E + PD + V EE ++ HSERLA+A+ LL G I
Sbjct: 597 ILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIR 656
Query: 591 IMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+MKNLRVC DCH +KL+SK+ R+ I+RDA RFHHF +G CSC+DYW
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 59/308 (19%)
Query: 94 SQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLF 151
S+ + + + L+S Y K + AR VF+ N+ +S+ AM+ GY M +A SLF
Sbjct: 75 SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV-VSWTAMVKGYMQEGMVGEAESLF 133
Query: 152 RRM-RREDGSSTVKFN--------------FNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
RM R + S TV F ++ + + +V+ N+ L + +
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 197 TFG--LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARV 254
F + ++ + +T Y + V++AR+LF+ M + +SW +M+ GY +G
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
E + M ++ PV +C NA+I
Sbjct: 254 EEFFEVMPMK-----PVI------AC----------------------------NAMIVG 274
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
+ G +++AR VFD M D+ +W A++LF +M + GVRP
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 375 VTVLSACS 382
+++LS C+
Sbjct: 335 ISILSVCA 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
EAL L+ M + CA L+ G Q+HAH++R D Y S L+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 106 SMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
+MY KC A+ VFD + I +N++ISGY+ + + +A+ +F M S T+
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM---PSSGTMP 430
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
N VT++ +++ C+ L G F + + + + M + G+V+ A
Sbjct: 431 ---NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKA 487
Query: 224 RQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
+L + M ++ D W A++ A H+ L KL PD +LSS
Sbjct: 488 MELIESMTIKPDATVWGALLG--ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545
Query: 283 LGAQVVGVEVERK 295
++ V V RK
Sbjct: 546 SRSKWGDVAVVRK 558
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 107/267 (40%), Gaps = 57/267 (21%)
Query: 216 KCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLA 275
+ G++ AR+ FD + + + SWN++VSGY NG +L+ EM R
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----------- 77
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
N N L++ Y + + AR VF+ M +++
Sbjct: 78 ----------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT-VFVTVLSACSHAGLTDKGLHYF 394
VVSWTA A LF M P+R V TV+ GL D G
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVM----FGGLIDDG--RI 157
Query: 395 DEMERKYGLQPGPEHYSC--LVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIH 452
D+ + Y + P + + ++ L R GR+ EA + M+ + + W ++ + +
Sbjct: 158 DKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER-NVVTWTTMITGYRQN 216
Query: 453 KNVELAELAFEHVIELEPTNIGYYVLL 479
V++A FE + E T + + +L
Sbjct: 217 NRVDVARKLFE--VMPEKTEVSWTSML 241
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/517 (34%), Positives = 300/517 (58%), Gaps = 8/517 (1%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T WN + + +E+L+ + M+ S S + Q+H
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFAD 146
+++R D + S+LI Y KC +A+ +F + +++ + + AMISGY N ++ D
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
++ +FR + + VK + N +T++ ++ + L G LHG + G D +
Sbjct: 425 SLEMFRWLVK------VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+ + MY KCG + LA ++F+ + RD++SWN+M++ AQ+ + + ++++ +M + +
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
D V++ A LS+CANL ++ G + + + S+ + + LI+MYA+CGNL A
Sbjct: 539 CYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMN 598
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV-RSGVRPDRTVFVTVLSACSHAG 385
VF M +K++VSW + ++ LF EMV +SG+RPD+ F+ ++S+C H G
Sbjct: 599 VFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG 658
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
D+G+ +F M YG+QP EHY+C+VDL GRAGRL EA + +KSM PD VWG L
Sbjct: 659 DVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTL 718
Query: 446 LGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
LGAC++HKNVELAE+A +++L+P+N GYYVL+SN +++A+ E V +VR +M+ER+++
Sbjct: 719 LGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQ 778
Query: 506 KDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL 542
K PG S++E + H+F SGD NHP+ IY + L
Sbjct: 779 KIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 9/315 (2%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNL 127
++C+ +L G Q+HA +I D YT ++ MY+ C ++F D +
Sbjct: 43 QACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSS 102
Query: 128 PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
+N++IS + N + A++ + +M S V T LV C +
Sbjct: 103 IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS------TFPCLVKACVALKNFKG 156
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
L + G+D + V +S + Y++ G++++ +LFD +L +D + WN M++GYA+
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
G V++ + M++ ++SP+ VT VLS CA+ +GV++ + G +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
N+L++MY++CG A +F M V+W ++ F EM+ SGV
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 368 RPDRTVFVTVLSACS 382
PD F ++L + S
Sbjct: 337 LPDAITFSSLLPSVS 351
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 6/277 (2%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR- 233
L+ C+ PN L G +H + + D L MY CG ++F + +R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 234 -DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE- 291
+ WN+++S + +NG + L Y +M +SPD T ++ +C L G++
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL-KNFKGIDF 159
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXX 351
+ + G N F+ ++LI Y G + +FD ++ K V W
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 352 XXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYS 411
++ F M + P+ F VLS C+ L D G+ + G+ +
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ-LHGLVVVSGVDFEGSIKN 278
Query: 412 CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
L+ + + GR +A L + M + D W ++
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/568 (36%), Positives = 302/568 (53%), Gaps = 58/568 (10%)
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH--NLPISYNAMISGY 138
TGFQ+H ++ G + + ++LI MY C AR+VFDE H NL +++NA+I+
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNL-VAWNAVITAC 182
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ A A +F +M + +S
Sbjct: 183 FRGNDVAGAREIFDKMLVRNHTS------------------------------------- 205
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
N L Y+K GE+E A+++F EM RD +SW+ M+ G A NG +
Sbjct: 206 --------WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
E++ MSP+ V+L VLS+C+ G+ G + +E+ G+ + NALI+MY+RC
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 319 GNLARARAVFDGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
GN+ AR VF+GM +K +VSWT+ AV LF+EM GV PD F+++
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
L ACSHAGL ++G YF EM+R Y ++P EHY C+VDL GR+G+L++A D I M + P
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
VW LLGAC H N+ELAE + + EL+P N G VLLSN Y+ A + V +R
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRK 497
Query: 498 MMRERKLRKDPGCSYVEYKGKVHVFYSGDRN-------HPQMKEIYRKVAELENSVMEIH 550
M ++++K S VE ++ F +G++ H ++KEI ++ + E+
Sbjct: 498 SMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEV- 556
Query: 551 RPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSK 610
Y V EE + HSE+LA+AFAL G I I+KNLR+C DCH MKL SK
Sbjct: 557 -ASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSK 615
Query: 611 IVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+ + ++RD RFH F+DG CSC+DYW
Sbjct: 616 VYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 30/300 (10%)
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLT--MYVKCG-----EVELARQ 225
L L++ C +L T +HG + +G+D D S+ T + + C + AR+
Sbjct: 9 LSLLNSCK---NLRALTQIHGLFIKYGVDTD-----SYFTGKLILHCAISISDALPYARR 60
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR--MSPDPVTLLAVLSSCANL 283
L D +N +V GY+++ + ++ EM +R+ + PD + V+ + N
Sbjct: 61 LLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEM-MRKGFVFPDSFSFAFVIKAVENF 119
Query: 284 GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXX 343
+ G ++ + + G S+ F+ LI MY CG + AR VFD M ++V+W A
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 344 XXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGL 403
A E+FD+M+ VR + T + +L+ AG + F EM + +
Sbjct: 180 TACFRGNDVAGAREIFDKML---VR-NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 404 QPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELAEL 460
+S ++ + G E+ + ++ + P+ +L AC + E ++
Sbjct: 236 S-----WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/325 (18%), Positives = 124/325 (38%), Gaps = 52/325 (16%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W+ ++ ++ + E+ +R + R+ +C+ G
Sbjct: 230 PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLN 141
LH V + G ++LI MYS+C +AR VF+ + +S+ +MI+G +++
Sbjct: 290 ILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMH 349
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+AV L FN +T G+ P+ + + LH C+
Sbjct: 350 GQGEEAVRL----------------FNEMTAYGVT-----PDGISFISLLHACS------ 382
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEM-----LVRDLISWNAMVSGYAQNGHAARVLE 256
G +E F EM + ++ + MV Y ++G + +
Sbjct: 383 --------------HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 428
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
+M + P + +L +C++ G + +V++++ + ++ L L N YA
Sbjct: 429 FICQMPI---PPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV-LLSNAYA 484
Query: 317 RCGNLARARAVFDGMVDKSVVSWTA 341
G ++ M+ + + TA
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTA 509
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 214/618 (34%), Positives = 320/618 (51%), Gaps = 58/618 (9%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTG--SQPDPYTRSSLISMYSKCSLPFLARRVFDE---TH 125
+ CA S G +LHA + +G P Y ++L Y+ A+++FDE +
Sbjct: 14 RHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSE 73
Query: 126 NLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHL 185
+ + ++S +S + +++ LF MRR+ + + V+++ L C L
Sbjct: 74 KDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK------RVEIDDVSVVCLFGVCAKLEDL 127
Query: 186 PTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEV------------------------- 220
HG AV G+ + V N+ + MY KCG V
Sbjct: 128 GFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 221 ------ELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR-RMSPDPVTL 273
E R++F EM R+ ++W MV+GY G VLEL EM R + VTL
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 274 LAVLSSCANLGAQVVG-------VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
++LS+CA G VVG ++ E + + + + AL++MYA+CGN+ +
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
VF M ++VV+W A +++F +M+R V+PD F VLSACSH+G+
Sbjct: 308 VFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGI 366
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
D+G F + R YGL+P +HY+C+VDLLGRAG ++EA L++ M V P+ V G+LL
Sbjct: 367 VDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLL 425
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
G+C +H VE+AE +I++ P N Y +L+SN+Y S+ +R +R+R +RK
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRK 485
Query: 507 DPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVRS----- 560
PG S + VH F SGDR+HP+ KEIY K+ E+ + + PD V
Sbjct: 486 IPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDL 545
Query: 561 EELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRD 620
EE HSE+LA+ F LL T+P T + + KNLR+C DCH MK+VSK+ +R+ IIRD
Sbjct: 546 EEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRD 605
Query: 621 ATRFHHFRDGVCSCKDYW 638
RFH F+ G CSC DYW
Sbjct: 606 RNRFHQFKGGSCSCSDYW 623
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 156/365 (42%), Gaps = 54/365 (14%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDAD--LAVMNSFLTMYVKCGEVELARQLFDEMLV 232
L+ C + L G LH T GL + N+ Y GE+ A++LFDE+ +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 233 --RDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANL-----GA 285
+D + W ++S +++ G ++L+ EM+ +R+ D V+++ + CA L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
Q GV V + G ++ + NAL++MY +CG ++ + +F+ + +KSVVSWT
Sbjct: 132 QGHGVAV-----KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDT 186
Query: 346 XXXXXXXXXAVELFDEM--------------------------------VRSGVRPDRTV 373
E+F EM R G +
Sbjct: 187 VVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVT 246
Query: 374 FVTVLSACSHAG--LTDKGLH-YFDEMERKYGLQPGPEHY---SCLVDLLGRAGRLKEAM 427
++LSAC+ +G + + +H Y + E G + + + LVD+ + G + +M
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI-ELEPTNIGYYVLLSNIYSDA 486
++ + M+ K + W AL +H + F +I E++P ++ + +LS
Sbjct: 307 NVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSG 365
Query: 487 KNSEG 491
EG
Sbjct: 366 IVDEG 370
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 298/528 (56%), Gaps = 12/528 (2%)
Query: 117 ARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
AR +F+ I +N+M GYS + + SLF + EDG + F S L
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEIL-EDGILPDNYTFPS-----L 135
Query: 176 VSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL 235
+ C + L G LH ++ GLD ++ V + + MY +C +V+ AR +FD ++ +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
+ +NAM++GYA+ L L+ EM+ + + P+ +TLL+VLSSCA LG+ +G + +
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 296 IEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXA 355
++ F + ALI+M+A+CG+L A ++F+ M K +W+A +
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 356 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
+ +F+ M V+PD F+ +L+ACSH G ++G YF +M K+G+ P +HY +VD
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGY 475
LL RAG L++A + I + + P +W LL AC H N++LAE E + EL+ ++ G
Sbjct: 376 LLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGD 435
Query: 476 YVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI 535
YV+LSN+Y+ K E V +R +M++RK K PGCS +E VH F+SGD ++
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKL 495
Query: 536 YRKVAELENSV-MEIHRPDEKYRVRS----EELLNGNGVHSERLAIAFALLSTRPGTEIT 590
+R + E+ + + + PD V + +E HSE+LAI F LL+T PGT I
Sbjct: 496 HRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIR 555
Query: 591 IMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
++KNLRVC DCH KL+S I R+ ++RD RFHHF DG CSC D+W
Sbjct: 556 VVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 16/292 (5%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
E SL+ +L K+CA+ G QLH ++ G + Y +LI
Sbjct: 112 EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLI 171
Query: 106 SMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
+MY++C AR VFD + YNAMI+GY+ + +A+SLFR M+ +
Sbjct: 172 NMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK------Y 225
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
N +T+L ++S C L L G +H A + V + + M+ KCG ++ A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 225 QLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
+F++M +D +W+AM+ YA +G A + + ++ M+ + PD +T L +L++C++ G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 285 AQVVGVEVERKIEQ---CGFGSNPFLTN--ALINMYARCGNLARARAVFDGM 331
VE RK FG P + + +++++ +R GNL A D +
Sbjct: 346 R----VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 293/538 (54%), Gaps = 58/538 (10%)
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+S++ RMR + V +F++ L + + P HLP G H + FGLD D V
Sbjct: 47 ISVYLRMR----NHRVSPDFHTFPFL--LPSFHNPLHLPLGQRTHAQILLFGLDKDPFVR 100
Query: 208 NSFLTMYVKCGE-------------------------------VELARQLFDEMLVRDLI 236
S L MY CG+ ++ AR+LFDEM R++I
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 237 SWNAMVSGYAQNGHAARVLELYHEMKLRR-----MSPDPVTLLAVLSSCANLGAQVVGVE 291
SW+ +++GY G L+L+ EM+L + + P+ T+ VLS+C LGA G
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM-VDKSVVSWTAXXXXXXXXX 350
V I++ + L ALI+MYA+CG+L RA+ VF+ + K V +++A
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 351 XXXXAVELFDEMVRS-GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
+LF EM S + P+ FV +L AC H GL ++G YF M ++G+ P +H
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
Y C+VDL GR+G +KEA I SM ++PD +WG+LL ++ +++ E A + +IEL+
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELD 400
Query: 470 PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNH 529
P N G YVLLSN+Y+ V +R M + + K PGCSYVE +G VH F GD +
Sbjct: 401 PMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQ 460
Query: 530 PQMKEIYRKVAELENSVMEI-HRPDEKYRVRSEELLNGN--------GVHSERLAIAFAL 580
+ + IY + E+ + E + D K E LL+ N HSE+LAIAF L
Sbjct: 461 QESERIYAMLDEIMQRLREAGYVTDTK-----EVLLDLNEKDKEIALSYHSEKLAIAFCL 515
Query: 581 LSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+ TRPGT + I+KNLR+C DCH+ MK++SK+ +R+ ++RD RFHHFRDG CSC+D+W
Sbjct: 516 MKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 42/302 (13%)
Query: 76 LSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLP----- 128
L LPL G + HA ++ G DP+ R+SL++MYS C A+RVFD+ + +LP
Sbjct: 76 LHLPL-GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSV 134
Query: 129 -------------------------ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
IS++ +I+GY + + +A+ LFR M+ +
Sbjct: 135 VNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAF 194
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
N TM ++S C L G +H + ++ D+ + + + MY KCG +E A
Sbjct: 195 -VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 224 RQLFDEM-LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR-RMSPDPVTLLAVLSSCA 281
+++F+ + +D+ +++AM+ A G +L+ EM ++P+ VT + +L +C
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 282 NLGAQVVGVE-VERKIEQCGFGSNPFLTN--ALINMYARCGNLARARAVFDGM-VDKSVV 337
+ G G + IE+ FG P + + ++++Y R G + A + M ++ V+
Sbjct: 314 HRGLINEGKSYFKMMIEE--FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 338 SW 339
W
Sbjct: 372 IW 373
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 14/230 (6%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHML-----RSSXXXXXXXXXXXXKSCAILSL 78
P +W+ + +YKEAL L+R M + +C L
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 79 PLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMIS 136
G +HA++ + + D ++LI MY+KC A+RVF+ + +Y+AMI
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
++ + + LF M D N NSVT +G++ C + G +
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSD-----NINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 197 -TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSG 244
FG+ + + +Y + G ++ A M + D++ W +++SG
Sbjct: 330 EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 332/628 (52%), Gaps = 20/628 (3%)
Query: 18 GEPKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILS 77
G +RH V WN + L K R+ KEA+ +YR M+ ++ K+ + LS
Sbjct: 124 GMSERHIV----TWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS 179
Query: 78 LPLTGFQLHAHVIRTGSQ-PDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISY-NAMI 135
L + H + G + + + S+L+ MY K A+ V D + A+I
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
GYS +AV F+ M E K N T ++ C + G +HG
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVE------KVQPNEYTYASVLISCGNLKDIGNGKLIHGLM 293
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
V G ++ LA S LTMY++C V+ + ++F + + +SW +++SG QNG L
Sbjct: 294 VKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMAL 353
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+ +M + P+ TL + L C+NL G ++ + + GF + + + LI++Y
Sbjct: 354 IEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLY 413
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
+CG AR VFD + + V+S A++LF+ M+ G++P+ +
Sbjct: 414 GKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVL 473
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
+VL AC+++ L ++G FD RK + +HY+C+VDLLGRAGRL+EA +++ + +
Sbjct: 474 SVLLACNNSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVI 531
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRV 495
PD +W LL ACK+H+ VE+AE ++E+EP + G +L+SN+Y+ V+ +
Sbjct: 532 NPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEM 591
Query: 496 RVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR-NHPQMKEIYRKVAELENSVMEIHRPDE 554
+ M++ KL+K+P S+VE + H F +GD +HP ++I + EL ++ ++
Sbjct: 592 KSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVED 651
Query: 555 KYRVRS--EELLNGNGV--HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSK 610
K V EE + HSE+LAIAFA+ G+ I I+KNLRVCVDCH ++K+VS+
Sbjct: 652 KSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSR 710
Query: 611 IVNRQFIIRDATRFHHFRDGVCSCKDYW 638
++ R+ I RD+ RFHHFRDG CSC DYW
Sbjct: 711 VMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 215 VKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLL 274
+KCG+++ ARQ+FD M R +++WN++++ ++ + +E+Y M + PD TL
Sbjct: 110 LKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLS 169
Query: 275 AVLSSCANLG-----------AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+V + ++L A ++G+EV SN F+ +AL++MY + G
Sbjct: 170 SVFKAFSDLSLEKEAQRSHGLAVILGLEV----------SNVFVGSALVDMYVKFGKTRE 219
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
A+ V D + +K VV TA AV+ F M+ V+P+ + +VL +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
G + K G + + L+ + R + +++ + K ++ P+ W
Sbjct: 280 LKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWT 337
Query: 444 ALLGACKIHKNVELAELAFEHVI 466
+L+ + E+A + F ++
Sbjct: 338 SLISGLVQNGREEMALIEFRKMM 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
L++ +CG++ AR VFDGM ++ +V+W + AVE++ M+ + V PD
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP--GPEHY-----SCLVDLLGRAGRL 423
+V A S L E +R +GL G E S LVD+ + G+
Sbjct: 165 EYTLSSVFKAFSDLSLE-------KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 424 KEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI--ELEPTNIGYYVLL 479
+EA ++ ++ K + ++G + ++ E + AF+ ++ +++P Y +L
Sbjct: 218 REAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVK-AFQSMLVEKVQPNEYTYASVL 274
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 307/562 (54%), Gaps = 16/562 (2%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSM 143
+H +++T DP L+ +Y++ A +VF+E N + ++ MI+ + N
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+AV LF RMR + V N T+ +++GC + G LHG V G D D
Sbjct: 329 CNEAVDLFIRMRE---AFVVP---NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ V N+ + +Y KC +++ A +LF E+ ++ +SWN ++ GY G + ++ E
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
++S VT + L +CA+L + +GV+V + ++N+LI+MYA+CG++
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
A++VF+ M V SW A A+ + D M +P+ F+ VLS CS+
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
AGL D+G F+ M R +G++P EHY+C+V LLGR+G+L +AM LI+ + +P +W
Sbjct: 563 AGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWR 622
Query: 444 ALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERK 503
A+L A N E A + E ++++ P + YVL+SN+Y+ AK V +R M+E
Sbjct: 623 AMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMG 682
Query: 504 LRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELE-NSVMEIHRPDEK---YRVR 559
++K+PG S++E++G VH F G +HP MK I + L + + PD +
Sbjct: 683 VKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMD 742
Query: 560 SEELLNGNGVHSERLAIAFALL---STRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQF 616
EE VHSERLA+A+ L+ S+R I IMKNLR+C DCH MK++S IV R
Sbjct: 743 DEEKDKRLWVHSERLALAYGLVRMPSSR--NRILIMKNLRICSDCHSAMKVISSIVQRDL 800
Query: 617 IIRDATRFHHFRDGVCSCKDYW 638
+IRD RFHHF GVCSC D+W
Sbjct: 801 VIRDMNRFHHFHAGVCSCGDHW 822
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 147/322 (45%), Gaps = 11/322 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P N W+ + + EA+ L+ M + CAI G
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
QLH V++ G D Y ++LI +Y+KC A ++F E + +S+N +I GY
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
A S+FR R S T VT + C + G +HG A+
Sbjct: 429 EGGKAFSMFREALRNQVSVT------EVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
+AV NS + MY KCG+++ A+ +F+EM D+ SWNA++SGY+ +G + L + MK
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGN 320
R P+ +T L VLS C+N G G E + + G P L + ++ + R G
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQ 601
Query: 321 LARARAVFDGM-VDKSVVSWTA 341
L +A + +G+ + SV+ W A
Sbjct: 602 LDKAMKLIEGIPYEPSVMIWRA 623
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 154/359 (42%), Gaps = 12/359 (3%)
Query: 79 PLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISG 137
P++ +H +++ GS D + + L++ Y K A +FDE +S+ + G
Sbjct: 65 PISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQG 124
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
Y+ D + L+ R+ RE G F S L L + P LH V
Sbjct: 125 YACQ----DPIGLYSRLHRE-GHELNPHVFTS--FLKLFVSLDKAEICPW---LHSPIVK 174
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
G D++ V + + Y CG V+ AR +F+ +L +D++ W +VS Y +NG+ L+L
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL 234
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
M++ P+ T L + LGA V +I + + +P + L+ +Y +
Sbjct: 235 LSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQ 294
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
G+++ A VF+ M VV W+ AV+LF M + V P+ ++
Sbjct: 295 LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
L+ C+ + G + K G + L+D+ + ++ A+ L + K
Sbjct: 355 LNGCAIGKCSGLG-EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 9/219 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN ++ + +A S++R LR+ +CA L+ G Q+H
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADA 147
I+T + +SLI MY+KC A+ VF+E + + S+NA+ISGYS + + A
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT-CLHGCAVTFGLDADLAV 206
+ + M+ D N +T LG++SGC+ + G C G++ L
Sbjct: 535 LRILDIMKDRDCKP------NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEH 588
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSG 244
+ + + G+++ A +L + + ++ W AM+S
Sbjct: 589 YTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 314/611 (51%), Gaps = 56/611 (9%)
Query: 38 LSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPD 97
L++ +++ ++ + MLR KS + L G LHA ++ D
Sbjct: 101 LTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCD 160
Query: 98 PYTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFADAVSLFR 152
+ R SL+ MY+K A +VF+E+ + + +N +I+GY A +LFR
Sbjct: 161 SFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFR 220
Query: 153 RM-RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFL 211
M R GS + L+ G
Sbjct: 221 SMPERNSGSWST-----------LIKG--------------------------------- 236
Query: 212 TMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPV 271
YV GE+ A+QLF+ M ++++SW +++G++Q G + Y EM + + P+
Sbjct: 237 --YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEY 294
Query: 272 TLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM 331
T+ AVLS+C+ GA G+ + I G + + AL++MYA+CG L A VF M
Sbjct: 295 TIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM 354
Query: 332 VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
K ++SWTA A++ F +M+ SG +PD VF+ VL+AC ++ D GL
Sbjct: 355 NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGL 414
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKI 451
++FD M Y ++P +HY +VDLLGRAG+L EA +L+++M + PD W AL ACK
Sbjct: 415 NFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKA 474
Query: 452 HKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCS 511
HK AE ++++EL+P G Y+ L ++ N + V + R+ +++R + G S
Sbjct: 475 HKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWS 534
Query: 512 YVEYKGKVHVFYSGDRNHPQMKEIYRKVAELEN-SVMEIHRPDEKYR---VRSEELLNGN 567
Y+E G+++ F +GD +H +EI K+ E+ + ++ + + P + + EE N
Sbjct: 535 YIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVT 594
Query: 568 GVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHF 627
G+HSE+LA+ L T PGT I I+KNLR+C DCH MK VSKI R ++RDA +FHHF
Sbjct: 595 GIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHF 654
Query: 628 RDGVCSCKDYW 638
+DG CSC DYW
Sbjct: 655 KDGRCSCGDYW 665
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 9/221 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W + S+ Y+ A+S Y ML +C+ +G
Sbjct: 254 PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGI 313
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
++H +++ G + D ++L+ MY+KC A VF H +S+ AMI G++++
Sbjct: 314 RIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHG 373
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTFGLD 201
F A+ FR+M + V L +++ C + + G + + ++
Sbjct: 374 RFHQAIQCFRQMMYSGEKP------DEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIE 427
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAM 241
L + + + G++ A +L + M + DL +W A+
Sbjct: 428 PTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 294/517 (56%), Gaps = 19/517 (3%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+N MI GY F +A+ + M + G+ F + L+ C + G
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQR-GNEPDNFTYPC-----LLKACTRLKSIREGKQ 153
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+HG GL+AD+ V NS + MY +CGE+EL+ +F+++ + SW++MVS A G
Sbjct: 154 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 213
Query: 251 AARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE----RKIEQCGFGSNP 305
+ L L+ M + + +++ L +CAN GA +G+ + R I + N
Sbjct: 214 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL----NI 269
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
+ +L++MY +CG L +A +F M ++ ++++A A+ +F +M++
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
G+ PD V+V+VL+ACSH+GL +G F EM ++ ++P EHY CLVDLLGRAG L+E
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 426 AMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSD 485
A++ I+S+ ++ + +W L C++ +N+EL ++A + +++L N G Y+L+SN+YS
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 486 AKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENS 545
+ + V R R + + L++ PG S VE KGK H F S DR+HP+ KEIY+ + ++E
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQ 509
Query: 546 V-MEIHRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDC 601
+ E + PD V EE HS+++AIAF LL T PG+ I I +NLR+C DC
Sbjct: 510 LKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDC 569
Query: 602 HIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
H + K +S I R+ ++RD RFH F+ G CSCKDYW
Sbjct: 570 HTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 22/306 (7%)
Query: 44 YKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSS 103
++EAL Y M++ K+C L G Q+H V + G + D + ++S
Sbjct: 113 FEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNS 172
Query: 104 LISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYSLNSMFADAVSLFRRMRREDGSST 162
LI+MY +C L+ VF++ + S+++M+S + M+++ + LFR M S
Sbjct: 173 LINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM-----CSE 227
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
M+ + C L G +HG + + ++ V S + MYVKCG ++
Sbjct: 228 TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDK 287
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
A +F +M R+ ++++AM+SG A +G L ++ +M + PD V ++VL++C++
Sbjct: 288 ALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSH 347
Query: 283 LGAQVVGVEV------ERKIEQCG--FGSNPFLTNALINMYARCGNLARARAVFDGM-VD 333
G G V E K+E +G L+++ R G L A + ++
Sbjct: 348 SGLVKEGRRVFAEMLKEGKVEPTAEHYG-------CLVDLLGRAGLLEEALETIQSIPIE 400
Query: 334 KSVVSW 339
K+ V W
Sbjct: 401 KNDVIW 406
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 316/569 (55%), Gaps = 22/569 (3%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSL-PF----LARRVFDETHN-LPISYNAMISG 137
QL +H + G + RS L+ +C++ PF A ++F L +NA+I G
Sbjct: 21 QLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRG 77
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
++ +S + A S +R M ++ SS+ +++T + C LH
Sbjct: 78 FAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINR 137
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
GL AD + + L Y K G++ A +LFDEM VRD+ SWNA+++G A+ +EL
Sbjct: 138 RGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMEL 197
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
Y M+ + VT++A L +C++LG V+ I N ++NA I+MY++
Sbjct: 198 YKRMETEGIRRSEVTVVAALGACSHLG----DVKEGENIFHGYSNDNVIVSNAAIDMYSK 253
Query: 318 CGNLARARAVFDGMV-DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
CG + +A VF+ KSVV+W A+E+FD++ +G++PD ++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
L+AC HAGL + GL F+ M K G++ +HY C+VDLL RAGRL+EA D+I SM +
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVR 496
PD +W +LLGA +I+ +VE+AE+A + E+ N G +VLLSN+Y+ + V RVR
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 497 VMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEK- 555
M ++++K PG SY+E KG +H FY+ D++H Q +EIY K+ E+ + E +
Sbjct: 433 DDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTG 492
Query: 556 ---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTE---ITIMKNLRVCVDCHIFMKLVS 609
+ + EE N HSE+LA+A+ L+ E + ++ NLR+C DCH+ K +S
Sbjct: 493 LVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHIS 552
Query: 610 KIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
KI R+ I+RD RFH F+DG CSC+D+W
Sbjct: 553 KIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 326/634 (51%), Gaps = 31/634 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W+ + K +LSL+ M R K+C +L+ G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
Q+H ++ G + +SL+ MYSKC A +VF + IS+NAMI+G+
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD- 201
+ A+ F M+ + +K + T+ L+ C+ + G +HG V G
Sbjct: 188 YGSKALDTFGMMQE----ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 202 -ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ + S + +YVKCG + AR+ FD++ + +ISW++++ GYAQ G + L+
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
++ D L +++ A+ G +++ + G + N++++MY +CG
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ A F M K V+SWT +V +F EM+R + PD ++ VLSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH+G+ +G F ++ +G++P EHY+C+VDLLGRAGRLKEA LI +M +KP+
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK--NSEGVLRVRVM 498
+W LL C++H ++EL + + ++ ++ N YV++SN+Y A N +G R +
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG--NAREL 541
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP-------QMKEIYRKVAELENSVM---- 547
+ L+K+ G S+VE + +VH F SG+ +HP +KE R++ E V
Sbjct: 542 GNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKH 601
Query: 548 EIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLS---TRPGTEITIMKNLRVCVDCHIF 604
E+H D++ + EE L HSE+LAI AL + + G I + KNLRVCVDCH F
Sbjct: 602 ELHDIDDESK---EENLR---AHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEF 655
Query: 605 MKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+K +SKI +++RDA RFH F DG CSC DYW
Sbjct: 656 IKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 208/434 (47%), Gaps = 31/434 (7%)
Query: 73 CAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP---- 128
C L G Q+H +++++GS + T + LI MY KC P +A +VFD ++P
Sbjct: 16 CTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD---SMPERNV 72
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
+S++A++SG+ LN ++SLF M R+ G +F F++ + C L N L G
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTN-----LKACGLLNALEKG 126
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+HG + G + + V NS + MY KCG + A ++F ++ R LISWNAM++G+
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 249 GHAARVLELYHEMKLRRMS--PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFG--SN 304
G+ ++ L+ + M+ + PD TL ++L +C++ G G ++ + + GF S+
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
+T +L+++Y +CG L AR FD + +K+++SW++ A+ LF +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCL---VDLLGRAG 421
+ D +++ + L +G +M+ P S L VD+ + G
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQG----KQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 422 RLKEAMDLIKSMKVKPDGAVWGALLGACKIH----KNVELAELAFEHVIELEPTNIGYYV 477
+ EA M++K D W ++ H K+V + H I EP + Y
Sbjct: 363 LVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI--EPDEVCYLA 419
Query: 478 LLSNIYSDAKNSEG 491
+LS EG
Sbjct: 420 VLSACSHSGMIKEG 433
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 278/521 (53%), Gaps = 12/521 (2%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAI-LSLP 79
+R P T WN L + +A SL+R M + +S + SL
Sbjct: 111 ERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLK 170
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNLPISYNAMIS 136
L +HA IR G ++ IS Y KC A+ VF D +S+N+M
Sbjct: 171 LLE-AMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 229
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
YS+ DA L+ M RE+ F + T + L + C P L G +H A+
Sbjct: 230 AYSVFGEAFDAFGLYCLMLREE------FKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 197 TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLE 256
G D D+ +N+F++MY K + AR LFD M R +SW M+SGYA+ G L
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFG-SNPFLTNALINMY 315
L+H M PD VTLL+++S C G+ G ++ + + G N + NALI+MY
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
++CG++ AR +FD +K+VV+WT A++LF +M+ +P+ F+
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
VL AC+H+G +KG YF M++ Y + PG +HYSC+VDLLGR G+L+EA++LI++M
Sbjct: 464 AVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA 523
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRV 495
KPD +WGALL ACKIH+NV++AE A E + LEP YV ++NIY+ A +G R+
Sbjct: 524 KPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARI 583
Query: 496 RVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
R +M++R ++K PG S ++ GK H F G+ H + + IY
Sbjct: 584 RSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 210/463 (45%), Gaps = 18/463 (3%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
++ AWNL++ E + E+L L+R M R K+CA L+
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSM 143
+HAH+I++ D + ++ + M+ KC+ A +VF+ ++NAM+SG+ +
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
A SLFR MR + + +SVT++ L+ + L +H + G+D
Sbjct: 134 TDKAFSLFREMRLNEITP------DSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEML--VRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ V N++++ Y KCG+++ A+ +F+ + R ++SWN+M Y+ G A LY M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
PD T + + +SC N G + G + N I+MY++ +
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
AR +FD M ++ VSWT A+ LF M++SG +PD ++++S C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHY-SCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
G + G + D YG + + L+D+ + G + EA D+ + P+
Sbjct: 368 GKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN---TPEKT 423
Query: 441 V--WGALLGACKIHKNVELAELAFEHVIELE--PTNIGYYVLL 479
V W ++ ++ A F +I+L+ P +I + +L
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 210/735 (28%), Positives = 353/735 (48%), Gaps = 132/735 (17%)
Query: 20 PKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLP 79
PKR + AWN +M + +++A+ L+R M S + C+
Sbjct: 50 PKRDDL----AWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGF 105
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLP--------- 128
G Q+H +V+R G + + +SLI MYS+ L+R+VF+ + NL
Sbjct: 106 AEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165
Query: 129 -------------------------ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
+++N+++SGY+ + DA+++ +RM+ + +
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ----IAGL 221
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
K + +S++ L+ P HL G +HG + L D+ V + + MY+K G + A
Sbjct: 222 KPSTSSIS--SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 224 RQLFDEM---------------------------LVR--------DLISWNAMVSGYAQN 248
R +FD M ++R D I+WN++ SGYA
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP--- 305
G + L++ +MK + ++P+ V+ A+ S C+ G ++V K+++ G G N
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 306 --------------------------------FLTNALINMYARCGNLARARAVFDGMVD 333
++ AL++MY + G+L A +F G+ +
Sbjct: 400 STLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN 459
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
KS+ SW + F M+ +G+ PD F +VLS C ++GL +G Y
Sbjct: 460 KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKY 519
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHK 453
FD M +YG+ P EH SC+VDLLGR+G L EA D I++M +KPD +WGA L +CKIH+
Sbjct: 520 FDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHR 579
Query: 454 NVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYV 513
++ELAE+A++ + LEP N Y+++ N+YS+ E V R+R +MR ++R S++
Sbjct: 580 DLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWI 639
Query: 514 EYKGKVHVFYSGDRNHPQMK----EIYRKVAELENSVMEIHRPD------EKYRVRSEEL 563
+ VH+FY+ + HP E+Y+ V+E++ S + PD + E+L
Sbjct: 640 QIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG---YVPDTSCIHQDISDSEKEKL 696
Query: 564 LNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATR 623
L G H+E+LA+ + L+ + I ++KN +C D H K +S + NR+ ++++ R
Sbjct: 697 LMG---HTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGAR 753
Query: 624 FHHFRDGVCSCKDYW 638
HHFRDG CSC D W
Sbjct: 754 VHHFRDGKCSCNDSW 768
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 182/405 (44%), Gaps = 47/405 (11%)
Query: 82 GFQLHAHVIRTG-SQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYS 139
G +H +I+ G D S+ + Y +C A ++FDE +++N ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ + AV LFR M+ + ++S TM+ L+ C+ G +HG + G
Sbjct: 66 RSGNWEKAVELFREMQFSGAKA-----YDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLG 119
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L++++++ NS + MY + G++EL+R++F+ M R+L SWN+++S Y + G+ + L
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP-------------- 305
EM++ + PD VT ++LS A+ G + V ++++ G +
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 306 ---------------------FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
++ LI+MY + G L AR VFD M K++V+W +
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A L M + G++PD + ++ S + G +K L +M+ K G+
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVA 358
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALL 446
P ++ + + G + A+ + M+ V P+ A LL
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 320/622 (51%), Gaps = 17/622 (2%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+ +WN + L + + EA+ Y+ M R SCA L G Q+H
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNS-MFA 145
++ G + ++L+++Y++ R++F + +S+N++I + +
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
+AV F +R N +T ++S + + G +HG A+ + +
Sbjct: 500 EAVVCFLNAQRAGQ------KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
N+ + Y KCGE++ ++F M R D ++WN+M+SGY N A+ L+L M
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
D VLS+ A++ G+EV + S+ + +AL++MY++CG L A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 325 RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSH 383
F+ M ++ SW + A++LF+ M G PD FV VLSACSH
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
AGL ++G +F+ M YGL P EH+SC+ D+LGRAG L + D I+ M +KP+ +W
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 444 ALLGAC--KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
+LGAC + EL + A E + +LEP N YVLL N+Y+ E +++ R M++
Sbjct: 794 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Query: 502 RKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVRS 560
++K+ G S+V K VH+F +GD++HP IY+K+ EL + + + P + +
Sbjct: 854 ADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYD 913
Query: 561 EELLNGNGV---HSERLAIAFALLSTRPGT-EITIMKNLRVCVDCHIFMKLVSKIVNRQF 616
E N + HSE+LA+AF L + R T I IMKNLRVC DCH K +SKI RQ
Sbjct: 914 LEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQI 973
Query: 617 IIRDATRFHHFRDGVCSCKDYW 638
I+RD+ RFHHF+DG CSC D+W
Sbjct: 974 ILRDSNRFHHFQDGACSCSDFW 995
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 190/439 (43%), Gaps = 25/439 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLP--LT 81
P+ +W + S+ ++KEAL R M++ ++C + L
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKC--SLPFLARRVFDETHNLPISYNAMISGYS 139
G Q+H + + D + LISMY KC S+ + D +S+N++IS YS
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF- 198
A +F M+ DGS ++ F S+ + + C+L P L T
Sbjct: 183 QAGDQRSAFRIFSSMQY-DGSRPTEYTFGSL----VTTACSLTE--PDVRLLEQIMCTIQ 235
Query: 199 --GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLE 256
GL DL V + ++ + K G + AR++F++M R+ ++ N ++ G + +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 257 LYHEMK-LRRMSPDPVTLLAVLSSCANLG-AQVVGVEVERKIEQ--CGFGSNPFLT---N 309
L+ +M + +SP+ +L LSS A+ VG++ R++ G F+ N
Sbjct: 296 LFMDMNSMIDVSPESYVIL--LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 310 ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRP 369
L+NMYA+CG++A AR VF M DK VSW + AVE + M R + P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 370 DRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
++ LS+C+ G E K G+ + L+ L G L E +
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 430 IKSMKVKPDGAVWGALLGA 448
SM + D W +++GA
Sbjct: 473 FSSMP-EHDQVSWNSIIGA 490
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 14/430 (3%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF- 83
V + +WN + S+ + A ++ M + L+ P
Sbjct: 168 VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL 227
Query: 84 -QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSL 140
Q+ + ++G D + S L+S ++K AR+VF+ ET N ++ N ++ G
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN-AVTLNGLMVGLVR 286
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNH--LPTGTCLHGCAVTF 198
+A LF M S + V +L +L L G +HG +T
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESY----VILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 199 GL-DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
GL D + + N + MY KCG + AR++F M +D +SWN+M++G QNG +E
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
Y M+ + P TL++ LSSCA+L +G ++ + + G N ++NAL+ +YA
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXX-XAVELFDEMVRSGVRPDRTVFVT 376
G L R +F M + VSW + AV F R+G + +R F +
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
VLSA S + G + K + + L+ G+ G + + M +
Sbjct: 523 VLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 437 PDGAVWGALL 446
D W +++
Sbjct: 582 RDNVTWNSMI 591
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 18/294 (6%)
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
LD D+ + N+ + Y++ G+ AR++FDEM +R+ +SW +VSGY++NG L
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE----QCGFGSNPFLTNALINMY 315
+M + + ++VL +C +G+ VG+ R+I + + + ++N LI+MY
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGS--VGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 316 ARC-GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
+C G++ A F + K+ VSW + A +F M G RP F
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 375 VT-VLSACSHAGLTDKGLHYFDEME---RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+ V +ACS LT+ + +++ +K GL S LV ++G L A +
Sbjct: 210 GSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVF 266
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFE--HVIELEPTNIGYYVLLSNI 482
M+ + + G ++G + E +L + +I++ P + Y +LLS+
Sbjct: 267 NQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES--YVILLSSF 318
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 135/287 (47%), Gaps = 18/287 (6%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSL 140
H+ + + D Y ++LI+ Y + AR+VFDE +P +S+ ++SGYS
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDE---MPLRNCVSWACIVSGYSR 79
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT--GTCLHGCAVTF 198
N +A+ R M +E G + ++ F SV + C + G +HG
Sbjct: 80 NGEHKEALVFLRDMVKE-GIFSNQYAFVSV-----LRACQEIGSVGILFGRQIHGLMFKL 133
Query: 199 GLDADLAVMNSFLTMYVKC-GEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
D V N ++MY KC G V A F ++ V++ +SWN+++S Y+Q G +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGV--EVERKIEQCGFGSNPFLTNALINMY 315
+ M+ P T +++++ +L V + ++ I++ G ++ F+ + L++ +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM 362
A+ G+L+ AR VF+ M ++ V+ A +LF +M
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 278/515 (53%), Gaps = 13/515 (2%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
IS+ MI G N +A+ LF+ M R ST S +++ C G
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKST------SRPFTCVITACANAPAFHMG 244
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+HG + G + V S +T Y C + +R++FDE + + W A++SGY+ N
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
L ++ M + P+ T + L+SC+ LG G E+ + G ++ F+
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N+L+ MY+ GN+ A +VF + KS+VSW + A +F +M+R
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYG-LQPGPEHYSCLVDLLGRAGRLKEAM 427
PD F +LSACSH G +KG F M + +HY+C+VD+LGR G+LKEA
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
+LI+ M VKP+ VW ALL AC++H +V+ E A + L+ + YVLLSNIY+ A
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544
Query: 488 NSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVM 547
V ++RV M++ + K PG S+V +GK H F+SGD+ P IY K+ L +
Sbjct: 545 RWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLK 602
Query: 548 EI-HRPDEK---YRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHI 603
E+ + PD + + V E+ HSERLAIAF L++T G+ +T+MKNLRVC DCH
Sbjct: 603 ELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHT 662
Query: 604 FMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+KL+S +V R+ ++RD RFHHF++G CSC DYW
Sbjct: 663 VIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 184/447 (41%), Gaps = 75/447 (16%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
K+ P +W + L + + EAL L+++MLR +CA
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFH 242
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYS 139
G Q+H +I+ G + Y +SLI+ Y+ C +R+VFDE H + A++SGYS
Sbjct: 243 MGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Query: 140 LNSMFADAVSLFRRMRRED---GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
LN DA+S+F M R ST NS + LG L G +HG AV
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGT---------LDWGKEMHGVAV 353
Query: 197 TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLE 256
GL+ D V NS + MY G V A +F ++ + ++SWN+++ G AQ+G
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE-----------VERKIEQCGFGSNP 305
++ +M PD +T +LS+C++ G G + ++RKI+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQH------- 466
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
++++ RCG L A EL + MV
Sbjct: 467 --YTCMVDILGRCGKLKEAE-------------------------------ELIERMV-- 491
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP-GPEHYSCLVDLLGRAGRLK 424
V+P+ V++ +LSAC D+G + + L Y L ++ AGR
Sbjct: 492 -VKPNEMVWLALLSACRMHSDVDRGEKAAAAI---FNLDSKSSAAYVLLSNIYASAGRWS 547
Query: 425 EAMDLIKSMK----VKPDGAVWGALLG 447
L MK +K G+ W + G
Sbjct: 548 NVSKLRVKMKKNGIMKKPGSSWVVIRG 574
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 182/387 (47%), Gaps = 28/387 (7%)
Query: 117 ARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
AR VF++ + +S Y MI+GY+ ++ DA++LF M D S V +
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDM 113
Query: 176 VSGCNLPNHLPTGTCL------HGCAVTFGLDA-----------DLAVMNSFLTMYVKCG 218
+ L + +P + + +GC + +D D A NS + Y++ G
Sbjct: 114 NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 219 EVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR---RMSPDPVTLLA 275
+V+ A +LF +M +++ISW M+ G QN + L+L+ M LR + + P T
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM-LRCCIKSTSRPFT--C 230
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
V+++CAN A +G++V I + GF +++ +LI YA C + +R VFD V +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
V WTA A+ +F M+R+ + P+++ F + L++CS G D G
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MH 349
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNV 455
+ K GL+ + LV + +G + +A+ + + K W +++ C H
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRG 408
Query: 456 ELAELAFEHVIEL--EPTNIGYYVLLS 480
+ A + F +I L EP I + LLS
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLS 435
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 291/552 (52%), Gaps = 45/552 (8%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P WN + ++ + +EAL + M + +C+ L+ G
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
Q+H+ + ++ D Y S+L+ MYSKC A+RVFDE + + S+N++I+ + N
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG-LD 201
+A+ +F+ M + + VT+ ++S C + + G +HG V L
Sbjct: 233 PAVEALDVFQMMLES------RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLI------------------------- 236
D+ + N+F+ MY KC ++ AR +FD M +R++I
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 237 ------SWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGV 290
SWNA+++GY QNG L L+ +K + P + +L +CA+L +G+
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 291 EVERKIEQCGFG------SNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
+ + + GF + F+ N+LI+MY +CG + VF M+++ VSW A
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A+ELF EM+ SG +PD + VLSAC HAG ++G HYF M R +G+
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
P +HY+C+VDLLGRAG L+EA +I+ M ++PD +WG+LL ACK+H+N+ L + E
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEK 586
Query: 465 VIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYS 524
++E+EP+N G YVLLSN+Y++ E V+ VR MR+ + K PGCS+++ +G HVF
Sbjct: 587 LLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMV 646
Query: 525 GDRNHPQMKEIY 536
D++HP+ K+I+
Sbjct: 647 KDKSHPRKKQIH 658
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 151/342 (44%), Gaps = 34/342 (9%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----------------- 233
+H + G ++ + N + Y KCG +E RQ+FD+M R
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 234 --------------DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
D +WN+MVSG+AQ+ L + M + + +VLS+
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSW 339
C+ L GV+V I + F S+ ++ +AL++MY++CGN+ A+ VFD M D++VVSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 340 TAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
+ A+++F M+ S V PD +V+SAC+ G + +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 400 KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAE 459
L+ + VD+ + R+KEA + SM ++ + +++ + + + A
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAAR 340
Query: 460 LAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
L F + E + + L++ + +N E + ++ RE
Sbjct: 341 LMFTKMA--ERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 316/577 (54%), Gaps = 34/577 (5%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSM 143
LH ++ G D +T + L+ Y K AR++FDE +S+ ++ISGY+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+A+S+F++M + ++ F SV C+ G +H GL +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASV-----FKACSALAESRIGKNIHARLEISGLRRN 165
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLV--RDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ V +S + MY KC +VE AR++FD M+ R+++SW +M++ YAQN +EL+
Sbjct: 166 IVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF 225
Query: 262 KLRRMS--PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
S + L +V+S+C++LG G + + G+ SN + +L++MYA+CG
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+L+ A +F + SV+S+T+ AV+LFDEMV + P+ + VL
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD- 438
ACSH+GL ++GL Y M KYG+ P HY+C+VD+LGR GR+ EA +L K+++V +
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 439 GA-VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
GA +WGALL A ++H VE+ A + +I+ Y+ LSN Y+ + E +R+
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRL 465
Query: 498 MMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI-HRP---- 552
M+ K+ CS++E K V+VF++GD + + EI R + +LE + E HR
Sbjct: 466 EMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSM 525
Query: 553 -----------DEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDC 601
DE+ + +E+++ +H ERLA+A+ LL G+ I IM NLR+C DC
Sbjct: 526 ITTSSSVFVDVDEEAK---DEMVS---LHCERLALAYGLLHLPAGSTIRIMNNLRMCRDC 579
Query: 602 HIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
H KL+S+IV R+ ++RD RFH F++G C+C+DYW
Sbjct: 580 HEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 8/258 (3%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-- 128
K+C+ L+ G +HA + +G + + SSL+ MY KC+ ARRVFD
Sbjct: 139 KACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRN 198
Query: 129 -ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
+S+ +MI+ Y+ N+ +A+ LFR ++ N + ++S C+ L
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSF----NAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
G HG G +++ V S L MY KCG + A ++F + +IS+ +M+ A+
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE-VERKIEQCGFGSNPF 306
+G ++L+ EM R++P+ VTLL VL +C++ G G+E + E+ G +
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 307 LTNALINMYARCGNLARA 324
+++M R G + A
Sbjct: 375 HYTCVVDMLGRFGRVDEA 392
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 293/551 (53%), Gaps = 44/551 (7%)
Query: 26 NPTT-AWNLRLMELSKQRQYKEALSLYRHMLR---SSXXXXXXXXXXXXKSCAILSLPLT 81
NP +WN+ + S+ KE+ LY+ MLR K CA L L
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYS 139
G + HV++ + + ++ I M++ C AR+VFDE+ +L +S+N +I+GY
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL-VSWNCLINGYK 233
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
A+ +++ M E + VTM+GLVS C++ L G + G
Sbjct: 234 KIGEAEKAIYVYKLMESEG------VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG---------- 249
L + ++N+ + M+ KCG++ AR++FD + R ++SW M+SGYA+ G
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 250 ------------------HAAR---VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
A R L L+ EM+ PD +T++ LS+C+ LGA V
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
G+ + R IE+ N L +L++MYA+CGN++ A +VF G+ ++ +++TA
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A+ F+EM+ +G+ PD F+ +LSAC H G+ G YF +M+ ++ L P +
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK 527
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL 468
HYS +VDLLGRAG L+EA L++SM ++ D AVWGALL C++H NVEL E A + ++EL
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587
Query: 469 EPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRN 528
+P++ G YVLL +Y +A E R R MM ER + K PGCS +E G V F D++
Sbjct: 588 DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKS 647
Query: 529 HPQMKEIYRKV 539
P+ ++IY ++
Sbjct: 648 RPESEKIYDRL 658
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 201/433 (46%), Gaps = 41/433 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL--ARRVFDETHNLPI-SYNAMISGYSL 140
Q+ A +I G DP+ S LI+ + +L + ++ N I S+N I G+S
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSE 130
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ ++ L+++M R + +F + + + L + G + G + L
Sbjct: 131 SENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS---LGHMILGHVLKLRL 187
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ V N+ + M+ CG++E AR++FDE VRDL+SWN +++GY + G A + + +Y
Sbjct: 188 ELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M+ + PD VT++ ++SSC+ LG G E +++ G L NAL++M+++CG+
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 321 LARARAVFDGMVDKSVVSWT-------------------------------AXXXXXXXX 349
+ AR +FD + +++VSWT A
Sbjct: 308 IHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQA 367
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
A+ LF EM S +PD + LSACS G D G+ +E KY L
Sbjct: 368 KRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE-KYSLSLNVAL 426
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE-- 467
+ LVD+ + G + EA+ + ++ + + + A++G +H + A F +I+
Sbjct: 427 GTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEMIDAG 485
Query: 468 LEPTNIGYYVLLS 480
+ P I + LLS
Sbjct: 486 IAPDEITFIGLLS 498
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 312/583 (53%), Gaps = 39/583 (6%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKC---SLPFLARRVFD--ETHNLPISYNAMIS 136
G Q+H ++ G Y +++ISMY +C + + A VF+ + NL +++N+MI+
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNL-VTWNSMIA 234
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN-----LPNHLPTGTCL 191
+ ++ A+ +F RM DG F+ T+L + S +PN + + CL
Sbjct: 235 AFQCCNLGKKAIGVFMRMH-SDG-----VGFDRATLLNICSSLYKSSDLVPNEV-SKCCL 287
Query: 192 --HGCAVTFGLDADLAVMNSFLTMYVKCGE-VELARQLFDEML-VRDLISWNAMVSGYAQ 247
H V GL V + + +Y + E +LF EM RD+++WN +++ +A
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
R + L+ +++ ++SPD T +VL +CA L + + ++ + GF ++ L
Sbjct: 348 YD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVL 406
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
N+LI+ YA+CG+L VFD M + VVSW + + +F +M +
Sbjct: 407 NNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DI 463
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
PD F+ +LSACSHAG ++GL F M K P HY+C++D+L RA R EA
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL-EPTNIGYYVLLSNIY-SD 485
++IK M + PD VW ALLG+C+ H N L +LA + + EL EPTN Y+ +SNIY ++
Sbjct: 524 EVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAE 583
Query: 486 AKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENS 545
+E L ++ M R +RK+P S+ E KVH F SG R+ P + +YR++ L +
Sbjct: 584 GSFNEANLSIKEMETWR-VRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISW 642
Query: 546 VMEIHRPDEKYRVRSEELLNGNGV-----HSERLAIAFALLSTRPGTE-----ITIMKNL 595
+ E+ E + HSE+LA+AFA++ R ++ I IMKN
Sbjct: 643 LKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNT 702
Query: 596 RVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
R+C+DCH FMKL SK++ ++ ++RD+ RFHHF+D CSC DYW
Sbjct: 703 RICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 174 GLVSGCNLPNHLPTGTCLHGCAVT--FGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
L C +L G LH ++ + ++ + N + MY KCG + ARQ+FD M
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSC-ANLGAQVVGV 290
R+++SW A+++GY Q G+ L+ M L P+ TL +VL+SC G QV G+
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRYEPGKQVHGL 182
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLA---RARAVFDGMVDKSVVSWTAXXXXXX 347
+ + G + ++ NA+I+MY RC + A A VF+ + K++V+W +
Sbjct: 183 AL-----KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
A+ +F M GV DR + + S+
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 108/276 (39%), Gaps = 48/276 (17%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-I 129
K+CA L +HA VI+ G D +SLI Y+KC L RVFD+ + +
Sbjct: 377 KACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVV 436
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+N+M+ YSL+ + +F++M N +S T + L+S C+ + G
Sbjct: 437 SWNSMLKAYSLHGQVDSILPVFQKM---------DINPDSATFIALLSACSHAGRVEEG- 486
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
+ F +M+ K E QL V D++S
Sbjct: 487 -----------------LRIFRSMFEK---PETLPQLNHYACVIDMLS------------ 514
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
A R E +K M PD V +A+L SC G +G K+++ +N
Sbjct: 515 RAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574
Query: 310 ALINMYARCGNLARARAVFDGMVDKSV-----VSWT 340
+ N+Y G+ A M V +SWT
Sbjct: 575 QMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWT 610
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 301 FGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFD 360
+ N L N LINMYA+CGN+ AR VFD M +++VVSWTA LF
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 361 EMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGR- 419
M+ S P+ +VL++C + K +H + K GL + ++ + GR
Sbjct: 152 SML-SHCFPNEFTLSSVLTSCRYE--PGKQVH---GLALKLGLHCSIYVANAVISMYGRC 205
Query: 420 --AGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
EA + +++K K + W +++ A
Sbjct: 206 HDGAAAYEAWTVFEAIKFK-NLVTWNSMIAA 235
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/608 (30%), Positives = 316/608 (51%), Gaps = 20/608 (3%)
Query: 43 QYKEALSLYRHM-LRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTR 101
+++EA L+ + +R S ++C L +++ ++ G +P+ Y
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 102 SSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLNSMFADAVSLFRRMRRE-D 158
+ ++ M+ KC + ARR+FDE NL SY ++ISG+ + +A LF+ M E
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNL-YSYYSIISGFVNFGNYVEAFELFKMMWEELS 220
Query: 159 GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCG 218
T F GL S + G LH CA+ G+ + V + MY KCG
Sbjct: 221 DCETHTFAVMLRASAGLGS-------IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 219 EVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLS 278
++E AR F+ M + ++WN +++GYA +G++ L L ++M+ +S D TL ++
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 279 SCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVS 338
L + + + + GF S AL++ Y++ G + AR VFD + K+++S
Sbjct: 334 ISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
Query: 339 WTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEME 398
W A AV+LF++M+ + V P+ F+ VLSAC+++GL+++G F M
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMS 453
Query: 399 RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELA 458
+G++P HY+C+++LLGR G L EA+ I+ +K +W ALL AC++ +N+EL
Sbjct: 454 EVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELG 513
Query: 459 ELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGK 518
+ E + + P +G YV++ N+Y+ + V + + L P C++VE +
Sbjct: 514 RVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQ 573
Query: 519 VHVFYSGDR----NHPQMKEIYRKVAELENSVMEIHRPDEKYR----VRSEELLNGNGVH 570
H F SGDR N ++IY+KV EL + E +E+ V +E H
Sbjct: 574 THSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYH 633
Query: 571 SERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDG 630
SE+LAIA+ L++T + I +N R+C +CH ++ +S + R+ ++RDA+RFHHF++G
Sbjct: 634 SEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEG 693
Query: 631 VCSCKDYW 638
CSC YW
Sbjct: 694 KCSCGGYW 701
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 299/592 (50%), Gaps = 61/592 (10%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
W L S+ +A+ +R + R +CA +S G Q+H +
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADA 147
+++G + + Y +S+LI MY+KC AR + + E ++ +S+N+MI G + +A
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV-VSWNSMIVGCVRQGLIGEA 312
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLP-NHLPTGTCLHGCAVTFGLDADLAV 206
+S+F RM D + T+ +++ L + + H V G V
Sbjct: 313 LSMFGRMHERD------MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
N+ + MY K G ++ A ++F+ M+ +D+ISW A+V+G NG L+L+ M++ +
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
+PD + +VLS+ A L G +V + GF S+ + N+L+ MY +CG+L A
Sbjct: 427 TPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANV 486
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+F+ M + +++WT ++ + GL
Sbjct: 487 IFNSMEIRDLITWTC-----------------------------------LIVGYAKNGL 511
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ YFD M YG+ PGPEHY+C++DL GR+G + L+ M+V+PD VW A+L
Sbjct: 512 LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAIL 571
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
A + H N+E E A + ++ELEP N YV LSN+YS A + VR +M+ R + K
Sbjct: 572 AASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISK 631
Query: 507 DPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME----------IHRPDEKY 556
+PGCS+VE KGKVH F S DR HP+M EIY KV E+ + E +H D++
Sbjct: 632 EPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKE- 690
Query: 557 RVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLV 608
+EL G HSE+LA+AF LL G I I+KNLRVC DCH MKL+
Sbjct: 691 ---GKEL--GLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 175/355 (49%), Gaps = 11/355 (3%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVF--DETHNLPISYNAMISGYSLNSMFADAVSLFR 152
+ D +T +++I YS A ++F + N IS+NA+ISGY + +A +LF
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKN-TISWNALISGYCKSGSKVEAFNLFW 114
Query: 153 RMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLT 212
M+ DG ++ SV + C L G +HG + G D D+ V+N L
Sbjct: 115 EMQ-SDGIKPNEYTLGSVLRM-----CTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLA 168
Query: 213 MYVKCGEVELARQLFDEML-VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPV 271
MY +C + A LF+ M ++ ++W +M++GY+QNG A + +E + +++ +
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQY 228
Query: 272 TLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM 331
T +VL++CA++ A VGV+V I + GF +N ++ +ALI+MYA+C + ARA+ +GM
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 332 VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
VVSW + A+ +F M ++ D ++L+ + + K
Sbjct: 289 EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIA 348
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ K G + LVD+ + G + A+ + + M ++ D W AL+
Sbjct: 349 SSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 39/296 (13%)
Query: 186 PTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD----------- 234
P G+C+H A L ++L L K G V+ ARQ+FD+M RD
Sbjct: 15 PFGSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAY 69
Query: 235 --------------------LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLL 274
ISWNA++SGY ++G L+ EM+ + P+ TL
Sbjct: 70 SNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLG 129
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV-D 333
+VL C +L + G ++ + GF + + N L+ MYA+C ++ A +F+ M +
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE 189
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
K+ V+WT+ A+E F ++ R G + ++ F +VL+AC+ G+
Sbjct: 190 KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
+ K G + S L+D+ + ++ A L++ M+V D W +++ C
Sbjct: 250 HCCI-VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV-DDVVSWNSMIVGC 303
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 255/446 (57%), Gaps = 26/446 (5%)
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLE-LYHEMKLRR 265
+N + +K GE LA+++ +++I+WN M+ GY +N L+ L + +
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ P+ + + L++CA LG V + G N L++AL+++YA+CG++ +R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
VF + V W A A+ +F EM V PD F+ +L+ CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
L ++G YF M R++ +QP EHY +VDLLGRAGR+KEA +LI+SM ++PD +W +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 446 LGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
L + + +KN EL E+A ++ L G YVLLSNIYS K E +VR +M + +R
Sbjct: 341 LSSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 506 KDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRK-------------VAELENSVMEIHRP 552
K G S++E+ G +H F +GD +H + K IY+ V++ + +M++
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 553 DEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIV 612
++ EE LN HSE+LA+A+ +L + PGTEI I KN+R+C DCH ++K VSK++
Sbjct: 458 EK------EENLN---YHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLL 508
Query: 613 NRQFIIRDATRFHHFRDGVCSCKDYW 638
NR I+RD RFH F DG+CSC+DYW
Sbjct: 509 NRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 43/306 (14%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF--------- 121
+SC S Q HA + + G P S ++ Y +C+ +LARR+
Sbjct: 38 ESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPG 97
Query: 122 -------------------------DETHNLPISYNAMISGYSLNSMFADAVSLFRRMRR 156
+ + I++N MI GY N + +A+ + M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 157 EDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVK 216
KF+F S ++ C L +H + G++ + + ++ + +Y K
Sbjct: 158 FTDIKPNKFSFASS-----LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 217 CGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAV 276
CG++ +R++F + D+ WNAM++G+A +G A + ++ EM+ +SPD +T L +
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 277 LSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNLARARAVFDGM-VD 333
L++C++ G G E + + F P L + A++++ R G + A + + M ++
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSR-RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 334 KSVVSW 339
VV W
Sbjct: 332 PDVVIW 337
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLR-SSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
WNL + + QY+EAL ++ML + +CA L +H+
Sbjct: 131 TWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSL 190
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFADA 147
+I +G + + S+L+ +Y+KC +R VF +S +NAMI+G++ + + +A
Sbjct: 191 MIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEA 250
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC-AVTFGLDADLAV 206
+ +F M E S +S+T LGL++ C+ L G G + F + L
Sbjct: 251 IRVFSEMEAEHVSP------DSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEH 304
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVS 243
+ + + + G V+ A +L + M + D++ W +++S
Sbjct: 305 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 285/539 (52%), Gaps = 9/539 (1%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTG 82
P+ +W+ + S+ EALS + ML K+C+ L P G
Sbjct: 230 PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG 289
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLN 141
Q+H I++ + SL MY++C ARRVFD+ S+N +I+G + N
Sbjct: 290 SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+AVS+F +MR + F +++++ L+ P L G +H + +G
Sbjct: 350 GYADEAVSVFSQMR------SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHE 260
ADL V NS LTMY C ++ LF++ D +SWN +++ Q+ +L L+
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M + PD +T+ +L C + + +G +V + G F+ N LI+MYA+CG+
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
L +AR +FD M ++ VVSW+ A+ LF EM +G+ P+ FV VL+A
Sbjct: 524 LGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH GL ++GL + M+ ++G+ P EH SC+VDLL RAGRL EA I MK++PD
Sbjct: 584 CSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV 643
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
VW LL ACK NV LA+ A E++++++P N +VLL ++++ + N E +R M+
Sbjct: 644 VWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMK 703
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVR 559
+ ++K PG S++E + K+H+F++ D HP+ +IY + + + +++ P K R++
Sbjct: 704 KHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNPQHKKRLQ 762
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 199/453 (43%), Gaps = 24/453 (5%)
Query: 32 NLRLMELSKQRQYKEALSLYRHMLR-SSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
N + L K Y+EAL + + SS +C+ G ++H H++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAV 148
+ + D + ++SMY KC AR VFD NL +SY ++I+GYS N A+A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL-VSYTSVITGYSQNGQGAEAI 153
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
L+ +M +ED +F F S+ + C + + G LH + + L N
Sbjct: 154 RLYLKMLQEDLVPD-QFAFGSI-----IKACASSSDVGLGKQLHAQVIKLESSSHLIAQN 207
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMS 267
+ + MYV+ ++ A ++F + ++DLISW+++++G++Q G L EM
Sbjct: 208 ALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFH 267
Query: 268 PDPVTLLAVLSSCANL-----GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
P+ + L +C++L G+Q+ G+ ++ ++ N +L +MYARCG L
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-----AGNAIAGCSLCDMYARCGFLN 322
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
AR VFD + SW AV +F +M SG PD ++L A +
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
+G+ + K+G + L+ + L +L + + D W
Sbjct: 383 KPMALSQGMQIHSYI-IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 443 GALLGACKIHKN-VELAEL-AFEHVIELEPTNI 473
+L AC H+ VE+ L V E EP +I
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 281/513 (54%), Gaps = 8/513 (1%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + + YKEAL + M+ + + LS L G +LHA+VI
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVS 149
+ G + ++LI MYSKC+L R F H+ IS+ +I+GY+ N +A+
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
LFR + ++ + + + + ++ ++ + +H + GL D + N
Sbjct: 474 LFRDVAKK------RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNE 526
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ +Y KC + A ++F+ + +D++SW +M+S A NG+ + +EL+ M +S D
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
V LL +LS+ A+L A G E+ + + GF + A+++MYA CG+L A+AVFD
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD 646
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
+ K ++ +T+ AVELFD+M V PD F+ +L ACSHAGL D+
Sbjct: 647 RIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
G + ME +Y L+P PEHY CLVD+LGRA + EA + +K MK +P VW ALL AC
Sbjct: 707 GRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAAC 766
Query: 450 KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPG 509
+ H E+ E+A + ++ELEP N G VL+SN++++ V +VR M+ + K PG
Sbjct: 767 RSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPG 826
Query: 510 CSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL 542
CS++E GKVH F + D++HP+ KEIY K++E+
Sbjct: 827 CSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 209/449 (46%), Gaps = 16/449 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P AWN + + AL+LY +M K+CA L +G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLN 141
+LH+ +++ G + ++L+SMY+K ARR+FD + + +N+++S YS +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL- 200
+ + LFR M + NS T++ ++ C+ ++ G +H +
Sbjct: 263 GKSLETLELFREMHMTGPAP------NSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
++L V N+ + MY +CG++ A ++ +M D+++WN+++ GY QN LE + +
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M D V++ +++++ L + G+E+ + + G+ SN + N LI+MY++C
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
F M DK ++SWT A+ELF ++ + + D + ++L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 381 CS--HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
S + L K +H + RK L ++ LVD+ G+ + A + +S+K K D
Sbjct: 497 SSVLKSMLIVKEIHC--HILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-D 551
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIE 467
W +++ + ++ N A F ++E
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVE 580
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 148/303 (48%), Gaps = 10/303 (3%)
Query: 82 GFQLHAHVIRTGSQPD-PYTRSSLISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYS 139
G QLH+ + +T + + L+ MY KC A +VFDE + ++N MI Y
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
N A A++L+ MR E V +S L+ C + +G+ LH V G
Sbjct: 159 SNGEPASALALYWNMRVEG----VPLGLSSFP--ALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELY 258
+ ++N+ ++MY K ++ AR+LFD + D + WN+++S Y+ +G + LEL+
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI-EQCGFGSNPFLTNALINMYAR 317
EM + +P+ T+++ L++C +G E+ + + S ++ NALI MY R
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG + +A + M + VV+W + A+E F +M+ +G + D ++
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 378 LSA 380
++A
Sbjct: 393 IAA 395
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 6/237 (2%)
Query: 213 MYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVT 272
MY KCG ++ A ++FDEM R +WN M+ Y NG A L LY M++ + +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 273 LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
A+L +CA L G E+ + + G+ S F+ NAL++MYA+ +L+ AR +FDG
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 333 DK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
+K V W + +ELF EM +G P+ V+ L+AC G
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 392 HYFDEMERKYGLQPGPEHYSC--LVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ + E Y C L+ + R G++ +A +++ M D W +L+
Sbjct: 305 EIHASVLKSS--THSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 79/199 (39%), Gaps = 14/199 (7%)
Query: 270 PVTLLA-VLSSCANLGAQVVGVEVERKIEQCGFGSNP-----FLTNALINMYARCGNLAR 323
PV A VL C A G ++ +I F + P FL L+ MY +CG+L
Sbjct: 79 PVEAFAYVLELCGKRRAVSQGRQLHSRI----FKTFPSFELDFLAGKLVFMYGKCGSLDD 134
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
A VFD M D++ +W A+ L+ M GV + F +L AC
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC-- 192
Query: 384 AGLTD-KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
A L D + + K G + LV + + L A L + K D +W
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 252
Query: 443 GALLGACKIH-KNVELAEL 460
++L + K++E EL
Sbjct: 253 NSILSSYSTSGKSLETLEL 271
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 274/514 (53%), Gaps = 26/514 (5%)
Query: 19 EPKRHPVN-----PTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSC 73
EP + N T WN ++ ALSLYR M S +C
Sbjct: 93 EPNHYSFNYMIRGLTNTWN----------DHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 74 AILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYN 132
A L G +H+ + + G + D + SLI MY+KC AR++FDE T +S+N
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWN 202
Query: 133 AMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLH 192
+MISGYS DA+ LFR+M E F + T++ ++ C+ L TG L
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEG------FEPDERTLVSMLGACSHLGDLRTGRLLE 256
Query: 193 GCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAA 252
A+T + + + ++MY KCG+++ AR++F++M+ +D ++W AM++ Y+QNG ++
Sbjct: 257 EMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 253 RVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALI 312
+L+ EM+ +SPD TL VLS+C ++GA +G ++E + N ++ L+
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 313 NMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
+MY +CG + A VF+ M K+ +W A A+ LFD M V P
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDI 433
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
F+ VLSAC HAGL +G YF EM +GL P EHY+ ++DLL RAG L EA + ++
Sbjct: 434 TFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 493
Query: 433 MKVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL-EPTNIGYYVLLSNIYSDAKNSEG 491
KPD + A+LGAC K+V + E A ++E+ E N G YV+ SN+ +D K +
Sbjct: 494 FPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDE 553
Query: 492 VLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSG 525
++R +MR+R + K PGCS++E +G++ F +G
Sbjct: 554 SAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 275/523 (52%), Gaps = 11/523 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W L + +KEA+ L+ M + SCA L G
Sbjct: 311 PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGT 370
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYS-LN 141
Q+HA+ I+ D Y +SLI MY+KC AR+VFD + +NAMI GYS L
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 142 SMFA--DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ + +A+++FR MR ++ +T + L+ L +HG +G
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSL------LTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L+ D+ ++ + +Y C ++ +R +FDEM V+DL+ WN+M +GY Q L L+
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
E++L R PD T ++++ NL + +G E ++ + G NP++TNAL++MYA+CG
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+ A FD + VV W + A+++ ++M+ G+ P+ FV VLS
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
ACSHAGL + GL F+ M R +G++P EHY C+V LLGRAGRL +A +LI+ M KP
Sbjct: 665 ACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
VW +LL C NVELAE A E I +P + G + +LSNIY+ +VR M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL 542
+ + K+PG S++ +VH+F S D++H + +IY + +L
Sbjct: 784 KVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 218/483 (45%), Gaps = 14/483 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P T W + K + +L L+ ++ + +C+IL G
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
Q+HAH++R G + D + LI Y KC A ++F+ N IS+ ++SGY N+
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ +A+ LF M S + +++ C + L GT +H + L
Sbjct: 330 LHKEAMELFTSM------SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARV---LELYH 259
D V NS + MY KC + AR++FD D++ +NAM+ GY++ G + L ++
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
+M+ R + P +T +++L + A+L + + ++ + + G + F +ALI++Y+ C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
L +R VFD M K +V W + A+ LF E+ S RPD F +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
A + G + ++ ++ GL+ P + L+D+ + G ++A S + D
Sbjct: 564 AAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DV 621
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
W +++ + H + A E ++ +EP I + +LS +G+ + +
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 498 MMR 500
M+R
Sbjct: 682 MLR 684
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 15/387 (3%)
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLN 141
FQL + ++++G D Y + LI Y K AR VFD +++ MISG
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
++ LF ++ ED + ++V +S C++ L G +H + +GL+
Sbjct: 228 GRSYVSLQLFYQLM-EDNVVPDGYILSTV-----LSACSILPFLEGGKQIHAHILRYGLE 281
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D ++MN + YVKCG V A +LF+ M +++ISW ++SGY QN +EL+ M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ PD ++L+SCA+L A G +V + G++ ++TN+LI+MYA+C L
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXX---XXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
AR VFD VV + A A+ +F +M +RP FV++L
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 379 SACSHAGLTDKGL-HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
A A LT GL + KYGL S L+D+ LK++ + MKVK
Sbjct: 462 RA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK- 518
Query: 438 DGAVWGALL-GACKIHKNVELAELAFE 463
D +W ++ G + +N E L E
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLE 545
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 150/302 (49%), Gaps = 10/302 (3%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLNS 142
+H +I G + D Y + LI++YS+ AR+VF++ NL +S++ M+S + +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNL-VSWSTMVSACNHHG 124
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC--LHGCAVTFGL 200
++ +++ +F R T K + N + + C+ + L V G
Sbjct: 125 IYEESLVVFLEFWR-----TRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D D+ V + Y+K G ++ AR +FD + + ++W M+SG + G + L+L+++
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
+ + PD L VLS+C+ L G ++ I + G + L N LI+ Y +CG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ A +F+GM +K+++SWT A+ELF M + G++PD ++L++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 381 CS 382
C+
Sbjct: 360 CA 361
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+HG + +GL+ D + N + +Y + G + AR++F++M R+L+SW+ MVS +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 251 AARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLG--AQVVGVEVERKIEQCGFGSNPFL 307
L ++ E + R+ SP+ L + + +C+ L + + +++ + + GF + ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
LI+ Y + GN+ AR VFD + +KS V+WT +++LF +++ V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
PD + TVLSACS + G + R YGL+ + L+D + GR+ A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 428 DLIKSMKVKPDGAVWGALLGACK---IHK 453
L M K + W LL K +HK
Sbjct: 305 KLFNGMPNK-NIISWTTLLSGYKQNALHK 332
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 285/540 (52%), Gaps = 46/540 (8%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G +LH HV++ G + Y +++L+ MYS C L +AR VFD + S+N MISGY+
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ +++ L M R S T SVT+L ++S C+ +H
Sbjct: 214 MKEYEESIELLVEMERNLVSPT------SVTLLLVLSACSKVKDKDLCKRVHEYVSECKT 267
Query: 201 DADLAVMNSFLTMYVKCGEVE-------------------------------LARQLFDE 229
+ L + N+ + Y CGE++ LAR FD+
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 230 MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG 289
M VRD ISW M+ GY + G LE++ EM+ M PD T+++VL++CA+LG+ +G
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 290 VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
++ I++ ++ + NALI+MY +CG +A+ VF M + +WTA
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
A+++F +M ++PD ++ VLSAC+H+G+ D+ +F +M + ++P H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
Y C+VD+LGRAG +KEA ++++ M + P+ VWGALLGA ++H + +AELA + ++ELE
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 470 PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNH 529
P N Y LL NIY+ K + + VR + + ++K PG S +E G H F +GD++H
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSH 627
Query: 530 PQMKEIYRKVAEL-ENSVMEIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTE 588
Q +EIY K+ EL + S + PD SE L +S +A F LS PGT+
Sbjct: 628 LQSEEIYMKLEELAQESTFAAYLPDT-----SELLFEAGDAYS--VANRFVRLSGHPGTK 680
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 192/441 (43%), Gaps = 59/441 (13%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCS-LPFLARRVFDETHNLP----ISYNAMISGY 138
QLH+ I G P+P + L + CS L + +P + +N MI G+
Sbjct: 52 QLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGW 109
Query: 139 SLNSMFADAVSLFRRMRRED---GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
S + V L+ M +E S T F N + G C G LH
Sbjct: 110 SKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC--------GKKLHCHV 161
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
V FGL ++L V N+ + MY CG +++AR +FD D+ SWN M+SGY + +
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
EL EM+ +SP VTLL VLS+C+ + + + V + +C + L NAL+N Y
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 316 ARC-------------------------------GNLARARAVFDGMVDKSVVSWTAXXX 344
A C GNL AR FD M + +SWT
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKG---LHYFDEMERKY 401
++E+F EM +G+ PD V+VL+AC+H G + G Y D+ + K
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN 401
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL-LGACKIHKNVELAEL 460
+ G + L+D+ + G ++A + M + D W A+ +G + E ++
Sbjct: 402 DVVVG----NALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQGQEAIKV 456
Query: 461 AFE-HVIELEPTNIGYYVLLS 480
F+ + ++P +I Y +LS
Sbjct: 457 FFQMQDMSIQPDDITYLGVLS 477
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 276/517 (53%), Gaps = 11/517 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P AW + + A + M++ KSC + + G
Sbjct: 72 PDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGA 131
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF--DETHNLPISYNAMISGYSLN 141
+H V++ G + Y +++++MY+ CS+ A + D +++ +I+G++
Sbjct: 132 LVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHL 191
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ ++++M E+ T + V + + TG +H + G
Sbjct: 192 GDGIGGLKMYKQMLLENAEVT------PYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
++L VMNS L +Y +CG + A+ F EM +DLI+WN ++S + ++ L ++
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRF 304
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ + P+ T +++++CAN+ A G ++ +I + GF N L NALI+MYA+CGN+
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNI 364
Query: 322 ARARAVFDGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
++ VF +VD+ ++VSWT+ AVELFD+MV SG+RPDR VF+ VLSA
Sbjct: 365 PDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA 424
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
C HAGL +KGL YF+ ME +YG+ P + Y+C+VDLLGRAG++ EA +L++ M KPD +
Sbjct: 425 CRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDES 484
Query: 441 VWGALLGACKIHK-NVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
WGA+LGACK HK N ++ LA V+EL+P +G YV+LS IY+ RVR MM
Sbjct: 485 TWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMM 544
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
R +K+ G S++ + +V F D+ P +Y
Sbjct: 545 RMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVY 581
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + Y + G VE AR LFDEM RD+++W AM++GYA + + AR E +HEM + SP
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG-NLARARAV 327
+ TL +VL SC N+ G V + + G + ++ NA++NMYA C + A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV--RSGVRPDRTVFVTVLSACSHAG 385
F + K+ V+WT ++++ +M+ + V P SA +
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
T K +H K G Q + ++DL R G L EA M+ K D W L
Sbjct: 230 TTGKQIH---ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTL 285
Query: 446 L 446
+
Sbjct: 286 I 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
L LI Y G + AR++FD M D+ VV+WTA A E F EMV+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
G P+ +VL +C + + G + K G++ + ++++ E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 426 AMDLI-KSMKVKPDGAVWGALL 446
A LI + +KVK D W L+
Sbjct: 165 AACLIFRDIKVKND-VTWTTLI 185
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 263/488 (53%), Gaps = 45/488 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
+++A +I G + + ++ K A R+F++ N + YN++I Y+ NS
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 143 MFADAVSLFRRMRRED----GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
++ D + +++++ R+ T F F S LG C L G +HG F
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG---SCYL------GKQVHGHLCKF 138
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWN------------------- 239
G + N+ + MY+K ++ A ++FDEM RD+ISWN
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 240 ------------AMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
AM+SGY G ++ + EM+L + PD ++L++VL SCA LG+
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLE 258
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
+G + E+ GF + NALI MY++CG +++A +F M K V+SW+
Sbjct: 259 LGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A+E F+EM R+ V+P+ F+ +LSACSH G+ +GL YFD M + Y ++P
Sbjct: 319 YHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
EHY CL+D+L RAG+L+ A+++ K+M +KPD +WG+LL +C+ N+++A +A +H++E
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR 527
LEP ++G YVLL+NIY+D E V R+R M+R ++K PG S +E V F SGD
Sbjct: 439 LEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDN 498
Query: 528 NHPQMKEI 535
+ P EI
Sbjct: 499 SKPFWTEI 506
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 189/449 (42%), Gaps = 105/449 (23%)
Query: 44 YKEALSLYRHMLRSSXXXXXXXXX-XXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRS 102
Y + + +Y+ +LR S KSCA L G Q+H H+ + G + T +
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 103 SLISMYSKCSLPFLARRVFDETH--------------------------------NLPIS 130
+LI MY K A +VFDE + +S
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+ AMISGY+ + +A+ FR M+ + ++++ ++ C L G
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQ------LAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+H A G V N+ + MY KCG + A QLF +M +D+ISW+ M+SGYA +G+
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGV----------EVERKIEQCG 300
A +E ++EM+ ++ P+ +T L +LS+C+++G G+ ++E KIE G
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 301 FGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFD 360
LI++ AR G L R AVE+
Sbjct: 383 ---------CLIDVLARAGKLER-------------------------------AVEITK 402
Query: 361 EMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE---HYSCLVDLL 417
M ++PD ++ ++LS+C G D L D + ++ PE +Y L ++
Sbjct: 403 TM---PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL-----VELEPEDMGNYVLLANIY 454
Query: 418 GRAGRLKEAMDLIK-----SMKVKPDGAV 441
G+ ++ L K +MK P G++
Sbjct: 455 ADLGKWEDVSRLRKMIRNENMKKTPGGSL 483
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 278/482 (57%), Gaps = 12/482 (2%)
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLN 141
FQ HAH+++ G DP+ R+SLIS YS L A R+FD + + ++ AMI G+ N
Sbjct: 123 FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG-L 200
++A+ F M++ ++ N +T++ ++ + G +HG + G +
Sbjct: 183 GSASEAMVYFVEMKKTGVAA------NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV 236
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D+ + +S + MY KC + A+++FDEM R++++W A+++GY Q+ + + ++ E
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEE 296
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M ++P+ TL +VLS+CA++GA G V + + N LI++Y +CG
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
L A VF+ + +K+V +WTA A +LF M+ S V P+ F+ VLSA
Sbjct: 357 LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
C+H GL ++G F M+ ++ ++P +HY+C+VDL GR G L+EA LI+ M ++P
Sbjct: 417 CAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
VWGAL G+C +HK+ EL + A VI+L+P++ G Y LL+N+YS+++N + V RVR M+
Sbjct: 477 VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHP-QMKEIYRKVAELENSVMEIHRPDEKYRVR 559
++++ K PG S++E KGK+ F + D P + ++Y+ L+ +++ PDE V
Sbjct: 537 DQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKT---LDTVGVQMRLPDELEDVT 593
Query: 560 SE 561
+E
Sbjct: 594 AE 595
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 155/391 (39%), Gaps = 43/391 (10%)
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL--YHEMKLRRMSPDPVTLLAVLSSC 280
AR+L ++ + W++++ ++ R L Y M+ + P T +L +
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 281 ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWT 340
L + I + G S+PF+ N+LI+ Y+ G A +FDG DK VV+WT
Sbjct: 115 FKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA-----GLTDKGLHYFD 395
A A+ F EM ++GV + V+VL A G + GL Y +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL-YLE 232
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNV 455
K + G S LVD+ G+ +A + M + + W AL+ +
Sbjct: 233 TGRVKCDVFIG----SSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAGYVQSRCF 287
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVL----RVRVMMRERKLRKDPGCS 511
+ L FE +++ S++ + K VL V + R R++ C
Sbjct: 288 DKGMLVFEEMLK------------SDVAPNEKTLSSVLSACAHVGALHRGRRVH----CY 331
Query: 512 YVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVRSEELLNGNGVHS 571
++ +++ + ++Y K LE +++ R EK ++NG H
Sbjct: 332 MIKNSIEINT-----TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 572 ---ERLAIAFALLSTRPG-TEITIMKNLRVC 598
+ + + +LS+ E+T M L C
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 7/157 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P W + + R + + + ++ ML+S +CA + G
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
++H ++I+ + + ++LI +Y KC A VF+ H + ++ AMI+G++ +
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC 179
DA LF M S N VT + ++S C
Sbjct: 387 YARDAFDLFYTMLSSHVSP------NEVTFMAVLSAC 417
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 256/459 (55%), Gaps = 12/459 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLN 141
++H + G D Y S L++ YSK A++VFDE + + +NA+++GYS
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
F DA+ +F +MR E+G + SV VSG + G +HG AV G
Sbjct: 241 FRFEDALLVFSKMR-EEGVGVSRHTITSVLSAFTVSG-----DIDNGRSIHGLAVKTGSG 294
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+D+ V N+ + MY K +E A +F+ M RDL +WN+++ + G L L+ M
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF----GSNPFLTNALINMYAR 317
+ PD VTL VL +C L + G E+ + G SN F+ N+L++MY +
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG+L AR VFD M K SW A+++F M R+GV+PD FV +
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
L ACSH+G ++G ++ +ME Y + P +HY+C++D+LGRA +L+EA +L S +
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD 534
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
+ VW ++L +C++H N +LA +A + + ELEP + G YVL+SN+Y +A E VL VR
Sbjct: 535 NPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRD 594
Query: 498 MMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
MR++ ++K PGCS++ K VH F++G++ HP+ K I+
Sbjct: 595 AMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 15/416 (3%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPD-PYTRSSLISMYSKCSLPFLARRVFDETHNLPI 129
+ CA ++G Q+H ++R G D P +SL++MY+KC L A VF +
Sbjct: 68 QRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVF 127
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
YNA+ISG+ +N DA+ +R M R +G K+ F S L+ G + L
Sbjct: 128 GYNALISGFVVNGSPLDAMETYREM-RANGILPDKYTFPS-----LLKGSD-AMELSDVK 180
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQN 248
+HG A G D+D V + +T Y K VE A+++FDE+ R D + WNA+V+GY+Q
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
L ++ +M+ + T+ +VLS+ G G + + G GS+ ++
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
NALI+MY + L A ++F+ M ++ + +W + + LF+ M+ SG+R
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 369 PDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEH-YSCLVDLLGRAGRLKE 425
PD TVL C +G +H + + + E ++ L+D+ + G L++
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 426 AMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLL 479
A + SM+VK D A W ++ + ELA F + ++P I + LL
Sbjct: 421 ARMVFDSMRVK-DSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 269/487 (55%), Gaps = 10/487 (2%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
W + K +E L L+ M ++ +C LS G H ++
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVS 149
++G + +SL+ MY KC ARRVF+E +H + + AMI GY+ N +A+S
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
LF++M+ V+ N VT+ ++SGC L +L G +HG ++ G+ D V N+
Sbjct: 330 LFQKMK------GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANA 382
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ MY KC + A+ +F+ +D+++WN+++SG++QNG L L+H M ++P+
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGF--GSNPFLTNALINMYARCGNLARARAV 327
VT+ ++ S+CA+LG+ VG + + GF S+ + AL++ YA+CG+ AR +
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
FD + +K+ ++W+A ++ELF+EM++ +P+ + F ++LSAC H G+
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
++G YF M + Y P +HY+C+VD+L RAG L++A+D+I+ M ++PD +GA L
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLH 622
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
C +H +L E+ + +++L P + YYVL+SN+Y+ VR +M++R L K
Sbjct: 623 GCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKI 682
Query: 508 PGCSYVE 514
G S +E
Sbjct: 683 AGHSTME 689
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 162/399 (40%), Gaps = 40/399 (10%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
Q H + G D + L+S+Y AR VFD+ + M+ Y LN
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ V L+ + + F ++ + + C L G +H C +
Sbjct: 122 ESVEVVKLYDLLMKHG------FRYDDIVFSKALKACTELQDLDNGKKIH-CQLVKVPSF 174
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D V+ L MY KCGE++ A ++F+++ +R+++ W +M++GY +N L L++ M+
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ + T ++ +C L A G + + G + L +L++MY +CG+++
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
AR VF+ +V WTA A+ LF +M ++P+ +VLS C
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 383 ----------------HAGLTDKGL---------HYFDEMERKYGLQPGPEH----YSCL 413
G+ D + + + KY + E ++ +
Sbjct: 355 LIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 414 VDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLGAC 449
+ + G + EA+ L M V P+G +L AC
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 139/339 (41%), Gaps = 40/339 (11%)
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTM 213
+ E+ S++ + +S L L+S C + L HG GL D+++ +++
Sbjct: 30 LTEENDGSSLHYAASSPCFL-LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSL 85
Query: 214 YVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
Y G + AR +FD++ D W M+ Y N + V++LY + D +
Sbjct: 86 YGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVF 145
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
L +C L G ++ ++ + N LT L++MYA+CG + A VF+ +
Sbjct: 146 SKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEIKSAHKVFNDITL 204
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
++VV WT+ + LF+ M + V + + T++ AC+ +G +
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KW 263
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRL------------------------------ 423
F K G++ + L+D+ + G +
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 424 -KEAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELA 458
EA+ L + MK +KP+ ++L C + +N+EL
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 13/221 (5%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
AWN + S+ EAL L+ M S +CA L G LHA+
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 90 IRTG--SQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFA 145
++ G + + ++L+ Y+KC P AR +FD E N I+++AMI GY
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN-TITWSAMIGGYGKQGDTI 528
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT-FGLDADL 204
++ LF M ++ N T ++S C + G +
Sbjct: 529 GSLELFEEMLKKQQKP------NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSG 244
+ M + GE+E A + ++M ++ D+ + A + G
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 269/499 (53%), Gaps = 47/499 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN-LPISY--NAMISGYSL 140
Q H ++I TG D + I S A VF TH P +Y N MI SL
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVF--THQPCPNTYLHNTMIRALSL 90
Query: 141 ---NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
+ + A++++R++ F F V + + + + G +HG V
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDT-FTFPFVLKIAV-----RVSDVWFGRQIHGQVVV 144
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAM---------------- 241
FG D+ + V+ + MY CG + AR++FDEMLV+D+ WNA+
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 242 -----------------VSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
+SGYA++G A+ +E++ M + + PD VTLLAVLS+CA+LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
+ +G + ++ G L NA+I+MYA+ GN+ +A VF+ + +++VV+WT
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A+ +F+ MV++GVRP+ F+ +LSACSH G D G F+ M KYG+
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
P EHY C++DLLGRAG+L+EA ++IKSM K + A+WG+LL A +H ++EL E A
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 465 VIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYS 524
+I+LEP N G Y+LL+N+YS+ + +R MM+ ++K G S +E + +V+ F S
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFIS 504
Query: 525 GDRNHPQMKEIYRKVAELE 543
GD HPQ++ I+ + E++
Sbjct: 505 GDLTHPQVERIHEILQEMD 523
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 268/521 (51%), Gaps = 8/521 (1%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +WN + + + ++AL L+ M S +C+ L G
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK 228
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNS 142
++H ++ G + D Y S+L+ MY KC +AR VF + +++N+MI GY
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
V + RM E G+ + S+ M C+ +L G +HG + ++A
Sbjct: 289 DSKSCVEILNRMIIE-GTRPSQTTLTSILM-----ACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D+ V S + +Y KCGE LA +F + SWN M+S Y G+ + +E+Y +M
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ PD VT +VL +C+ L A G ++ I + ++ L +AL++MY++CGN
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
A +F+ + K VVSWT A+ FDEM + G++PD + VLSAC
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG 522
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA-V 441
HAGL D+GL +F +M KYG++P EHYSC++D+LGRAGRL EA ++I+ D A +
Sbjct: 523 HAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAEL 582
Query: 442 WGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
L AC +H L + ++E P + Y++L N+Y+ ++ + RVR+ M+E
Sbjct: 583 LSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKE 642
Query: 502 RKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL 542
LRK PGCS++E KV F++ DR+H + + +Y +A L
Sbjct: 643 MGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 206/456 (45%), Gaps = 16/456 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXX-XXXKSCAILSLPLTGFQLHAHV 89
WN + SK + + L +++ +L S K+ L G +H V
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAV 148
+++G D SSL+ MY+K +L + +VFDE + S+N +IS + + A+
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
LF RM + F NSV++ +S C+ L G +H V G + D V +
Sbjct: 194 ELFGRME------SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + MY KC +E+AR++F +M + L++WN+M+ GY G + +E+ + M + P
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
TL ++L +C+ + G + + + ++ ++ +LI++Y +CG A VF
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
SW AVE++D+MV GV+PD F +VL ACS +
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 389 KG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
KG +H R L+ S L+D+ + G KEA + S+ K D W ++
Sbjct: 428 KGKQIHLSISESR---LETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 447 GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
A H A F+ + + L+P + +LS
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 15/306 (4%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-----YNAMISGYS 139
+H ++ G + D SLI++Y C AR VF+ N I +N+++SGYS
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE---NFDIRSDVYIWNSLMSGYS 82
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNF-NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
NSMF D + +F+R+ F F N + G + L G +H V
Sbjct: 83 KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL------GRMIHTLVVKS 136
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
G D+ V +S + MY K E + Q+FDEM RD+ SWN ++S + Q+G A + LEL+
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
M+ P+ V+L +S+C+ L G E+ RK + GF + ++ +AL++MY +C
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
L AR VF M KS+V+W + VE+ + M+ G RP +T ++L
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 379 SACSHA 384
ACS +
Sbjct: 317 MACSRS 322
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 11/284 (3%)
Query: 169 SVTMLGLVSGC-NLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLF 227
S +L L+ C N L +H +T GL D+ + S + +Y C + AR +F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 228 DEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGA 285
+ +R D+ WN+++SGY++N LE++ + PD T V+ + LG
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
+ +G + + + G+ + + ++L+ MYA+ + VFD M ++ V SW
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 346 XXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER---KYG 402
A+ELF M SG P+ +SACS ++G E+ R K G
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG----KEIHRKCVKKG 238
Query: 403 LQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ S LVD+ G+ L+ A ++ + M K A W +++
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA-WNSMI 281
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 278/533 (52%), Gaps = 29/533 (5%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
++N + S++ +AL L+ ++ S ++CA++ G Q++
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADAV 148
I++ D ++ I MY KC A RVFDE +S+NA+I+ + N + +
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
LF M R +F F S+ + C L G +H V G+ ++ +V
Sbjct: 469 FLFVSMLRSRIEPD-EFTFGSI-----LKACT-GGSLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRD--------------------LISWNAMVSGYAQN 248
S + MY KCG +E A ++ R +SWN+++SGY
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
+ L+ M ++PD T VL +CANL + +G ++ ++ + S+ ++
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
+ L++MY++CG+L +R +F+ + + V+W A A++LF+ M+ ++
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
P+ F+++L AC+H GL DKGL YF M+R YGL P HYS +VD+LG++G++K A++
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALE 761
Query: 429 LIKSMKVKPDGAVWGALLGACKIHK-NVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
LI+ M + D +W LLG C IH+ NVE+AE A ++ L+P + Y LLSN+Y+DA
Sbjct: 762 LIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 821
Query: 488 NSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVA 540
E V +R MR KL+K+PGCS+VE K ++HVF GD+ HP+ +EIY ++
Sbjct: 822 MWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 874
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 207/481 (43%), Gaps = 36/481 (7%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +WN L + + +++ ++ M R K C+ L G
Sbjct: 141 PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGM 200
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYS 139
Q+H V+R G D S+L+ MY+K + RVF +P +S++A+I+G
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF---QGIPEKNSVSWSAIIAGCV 257
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
N++ + A+ F+ M++ V + ++ C + L G LH A+
Sbjct: 258 QNNLLSLALKFFKEMQK------VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
AD V + L MY KC ++ A+ LFD + S+NAM++GY+Q H + L L+H
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
+ + D ++L V +CA + G+++ + + + NA I+MY +C
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
LA A VFD M + VSW A + LF M+RS + PD F ++L
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA------------- 426
AC+ G G+ + K G+ L+D+ + G ++EA
Sbjct: 492 ACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 427 ---MDLIKSM---KVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL--EPTNIGYYVL 478
M+ ++ M +++ W +++ + + E A++ F ++E+ P Y +
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 479 L 479
L
Sbjct: 610 L 610
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 94/180 (52%)
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D+ N + Y K ++ A F+ M VRD++SWN+M+SGY QNG + + +E++ +M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ D T +L C+ L +G+++ + + G ++ +AL++MYA+
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
+ VF G+ +K+ VSW+A A++ F EM + ++++ +VL +C+
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N +IN Y++ ++ +A + F+ M + VVSW + ++E+F +M R G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
D F +L CS T G+ + R G S L+D+ + R E++
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 429 LIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
+ + + K + W A++ C + N L LA + E++ N G
Sbjct: 237 VFQGIPEK-NSVSWSAIIAGC-VQNN--LLSLALKFFKEMQKVNAG 278
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 271/515 (52%), Gaps = 17/515 (3%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
WN + + EA L++ M K+C + G Q+H
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSM 143
++ G D +T SSLI MYSKC + AR+VF +LP +S NA+I+GYS N++
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS---SLPEWSVVSMNALIAGYSQNNL 610
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+AV LF+ M T N + +T +V C+ P L GT HG G ++
Sbjct: 611 -EEAVVLFQEML------TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 204 LAVMN-SFLTMYVKCGEVELARQLFDEMLV-RDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ S L MY+ + A LF E+ + ++ W M+SG++QNG L+ Y EM
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ + PD T + VL C+ L + G + I + +N LI+MYA+CG++
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 322 ARARAVFDGMVDKS-VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ VFD M +S VVSW + A+++FD M +S + PD F+ VL+A
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSHAG G F+ M +YG++ +H +C+VDLLGR G L+EA D I++ +KPD
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
+W +LLGAC+IH + E++ E +IELEP N YVLLSNIY+ E +R +MR
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI 535
+R ++K PG S+++ + + H+F +GD++H ++ +I
Sbjct: 964 DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 201/399 (50%), Gaps = 30/399 (7%)
Query: 93 GSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVSLF 151
G +PD ++I+ Y + AR +F E + + ++N MISG+ A+ F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 152 RRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFL 211
MR+ ST + ++ +G+V+ +L G +H A+ GL +++ V +S +
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDL------GLVVHAEAIKLGLASNIYVGSSLV 369
Query: 212 TMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPV 271
+MY KC ++E A ++F+ + ++ + WNAM+ GYA NG + +V+EL+ +MK + D
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 272 TLLAVLSSCA-----NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
T ++LS+CA +G+Q + +++K+ + N F+ NAL++MYA+CG L AR
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK-----NLFVGNALVDMYAKCGALEDARQ 484
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA-G 385
+F+ M D+ V+W A +LF M G+ D + L AC+H G
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 386 L-TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV--W 442
L K +H + K GL S L+D+ + G +K+A + S+ P+ +V
Sbjct: 545 LYQGKQVHC---LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL---PEWSVVSM 598
Query: 443 GALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLL 479
AL+ N+E A + F+ ++ + P+ I + ++
Sbjct: 599 NALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIV 636
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 207/476 (43%), Gaps = 33/476 (6%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + + + + + L+ M S +CA G Q H+ +I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVS 149
+ + + ++L+ MY+KC AR++F+ + +++N +I Y + ++A
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
LF+RM + + + + C + L G +H +V GLD DL +S
Sbjct: 516 LFKRM------NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ MY KCG ++ AR++F + ++S NA+++GY+QN V+ L+ EM R ++P
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPS 628
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGS-NPFLTNALINMYARCGNLARARAVF 328
+T ++ +C + +G + +I + GF S +L +L+ MY + A A+F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 329 DGMVD-KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
+ KS+V WT A++ + EM GV PD+ FVTVL CS
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 388 DKG----------LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
+G H DE+ + L+D+ + G +K + + M+ +
Sbjct: 749 REGRAIHSLIFHLAHDLDELTS-----------NTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEG 491
+ W +L+ + E A F+ + + + P I + +L+ K S+G
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 10/322 (3%)
Query: 185 LPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSG 244
L G +H ++ G+D++ + N+ + +Y KC +V A + FD L +D+ +WN+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSM 134
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
Y+ G +VL + + ++ P+ T VLS+CA G ++ + + G N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
+ AL++MYA+C ++ AR VF+ +VD + V WT AV +F+ M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
G RPD FVTV++ G F EM P ++ ++ G+ G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCET 309
Query: 425 EAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELAELAFEHVIELE-PTNIGYYVLLS 480
A++ +M+ VK + G++L A I N++L + I+L +NI L
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 481 NIYSDAKNSEGVLRVRVMMRER 502
++YS + E +V + E+
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEK 391
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 151/376 (40%), Gaps = 52/376 (13%)
Query: 76 LSLPL-TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAM 134
L+L L G +H+ + G + ++++ +Y+KC+ A + FD ++N+M
Sbjct: 72 LALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSM 131
Query: 135 ISGYSL----NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+S YS + VSLF E+ KF F+ V +S C ++ G
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLF-----ENQIFPNKFTFSIV-----LSTCARETNVEFGRQ 181
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+H + GL+ + + + MY KC + AR++F+ ++ + + W + SGY + G
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
+ ++ M+ PD + + V
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTV---------------------------------- 267
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
IN Y R G L AR +F M VV+W A+E F M +S V+
Sbjct: 268 -INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
R+ +VLSA D GL E K GL S LV + + +++ A +
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAE-AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 431 KSMKVKPDGAVWGALL 446
++++ K D W A++
Sbjct: 386 EALEEKND-VFWNAMI 400
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 286/534 (53%), Gaps = 39/534 (7%)
Query: 39 SKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILS-LPLTGFQLHAHVIRTGSQPD 97
++ Q +A ++ M R K+C+ S LP+ +H H+ + G D
Sbjct: 93 AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM-MHNHIEKLGLSSD 151
Query: 98 PYTRSSLISMYSKCSLPFL--ARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRM 154
Y ++LI YS+C + A ++F++ + +S+N+M+ G DA LF M
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Query: 155 RREDGSSTVKFNFNSVTMLGLVSGC-------NLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ D + +N TML + C L +P + + G
Sbjct: 212 PQRD---LISWN----TMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG-------- 256
Query: 208 NSFLTMYVKCGEVELARQLFDEMLV--RDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
Y K G++E+AR +FD+M + +++++W +++GYA+ G L +M
Sbjct: 257 ------YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ D ++++L++C G +G+ + +++ GSN ++ NAL++MYA+CGNL +A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
VF+ + K +VSW A+ELF M R G+RPD+ F+ VL +C+HAG
Sbjct: 371 DVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
L D+G+ YF ME+ Y L P EHY CLVDLLGR GRLKEA+ ++++M ++P+ +WGAL
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
Query: 446 LGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
LGAC++H V++A+ +++++L+P + G Y LLSNIY+ A++ EGV +R M+ +
Sbjct: 491 LGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
Query: 506 KDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVR 559
K G S VE + +H F D++HP+ +IY+ + S++E P E VR
Sbjct: 551 KPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLG----SLIEPPDPGELVAVR 600
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 12/261 (4%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
LH + L DL + ++ C + LA ++F+++ ++ N+++ +AQN
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
+ ++ EM+ + D T +L +C+ V + IE+ G S+ ++ NA
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNA 157
Query: 311 LINMYARCGNLA--RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
LI+ Y+RCG L A +F+ M ++ VSW + A LFDEM +
Sbjct: 158 LIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR--- 214
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
D + T+L + K F++M + + +S +V +AG ++ A
Sbjct: 215 -DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTMVMGYSKAGDMEMARV 268
Query: 429 LIKSMKVKPDGAV-WGALLGA 448
+ M + V W ++
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAG 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P W + + +++ KEA L M+ S +C L G
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYS 139
++H+ + R+ + Y ++L+ MY+KC ++ FD +++P +S+N M+ G
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCG---NLKKAFDVFNDIPKKDLVSWNTMLHGLG 392
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
++ +A+ LF RMRRE + VT + ++ CN
Sbjct: 393 VHGHGKEAIELFSRMRREG------IRPDKVTFIAVLCSCN 427
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 256/531 (48%), Gaps = 8/531 (1%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P W + L +YKE L+ + M RS K+CA L G
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
+H HVI G +SL +MY++C +F+ + +S+ ++I Y
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
AV F +MR + N T + S C + L G LH ++ GL+
Sbjct: 290 QEVKAVETFIKMRNS------QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
L+V NS + MY CG + A LF M RD+ISW+ ++ GY Q G + + M+
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
P L ++LS N+ G +V G N + ++LINMY++CG++
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
A +F +VS TA A++LF++ ++ G RPD F++VL+AC+
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT 523
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
H+G D G HYF+ M+ Y ++P EHY C+VDLL RAGRL +A +I M K D VW
Sbjct: 524 HSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVW 583
Query: 443 GALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRER 502
LL ACK ++E A E ++EL+PT V L+NIYS N E VR M+ +
Sbjct: 584 TTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
Query: 503 KLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPD 553
+ K+PG S ++ K V F SGDR HPQ ++IY + EL S E HR D
Sbjct: 644 GVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY-NILELAVSGAEAHRFD 693
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 10/358 (2%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPI 129
K+C S G LHA+ ++T Y SSL+ MY + + RVF E +
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 130 SYNAMISGYSLNSMFADAVSLFRRM-RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++ A+I+G + + ++ F M R E+ S T F + C + G
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAI-------ALKACAGLRQVKYG 228
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+H + G L V NS TMY +CGE++ LF+ M RD++SW +++ Y +
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G + +E + +M+ ++ P+ T ++ S+CA+L V G ++ + G + ++
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N+++ MY+ CGNL A +F GM + ++SW+ + F M +SG +
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
P ++LS + + + G + +GL+ S L+++ + G +KEA
Sbjct: 409 PTDFALASLLSVSGNMAVIEGG-RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 7/333 (2%)
Query: 117 ARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
AR+VFD+ H +S+ ++I Y + +A+ LF MR D + + + SV +
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV----V 114
Query: 176 VSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL 235
+ C +++ G LH AV L + + V +S L MY + G+++ + ++F EM R+
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
++W A+++G G L + EM D T L +CA L G +
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 296 IEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXA 355
+ GF + + N+L MY CG + +F+ M ++ VVSWT+ A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 356 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
VE F +M S V P+ F ++ SAC+ G + GL + ++
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV-LSLGLNDSLSVSNSMMK 353
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
+ G L A L + M+ + D W ++G
Sbjct: 354 MYSTCGNLVSASVLFQGMRCR-DIISWSTIIGG 385
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL--RR 265
NS L + G + ARQ+FD+M D++SW +++ Y ++ L L+ M++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+SPD L VL +C G + + S+ ++ ++L++MY R G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
VF M ++ V+WTA + F EM RS D F L AC AG
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC--AG 221
Query: 386 L 386
L
Sbjct: 222 L 222
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 254/494 (51%), Gaps = 16/494 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + S +AL Y+ MLR K+C+ L G +H V+
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVS 149
+TG + + Y + L+ MY C RVF++ + ++ ++ISG+ N+ F+DA+
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA------- 202
FR M+ S+ VK N M+ L+ C + TG HG G D
Sbjct: 195 AFREMQ----SNGVKAN--ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 203 -DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
++ + S + MY KCG++ AR LFD M R L+SWN++++GY+QNG A L ++ +M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
++PD VT L+V+ + G +G + + + GF + + AL+NMYA+ G+
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 368
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSA 380
A+ F+ + K ++WT A+ +F M G PD ++ VL A
Sbjct: 369 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH GL ++G YF EM +GL+P EHY C+VD+L RAGR +EA L+K+M VKP+
Sbjct: 429 CSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN 488
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
+WGALL C IH+N+EL + V E E G YVLLSNIY+ A V +R M+
Sbjct: 489 IWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMK 548
Query: 501 ERKLRKDPGCSYVE 514
+++ K G S VE
Sbjct: 549 SKRVDKVLGHSSVE 562
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 25/295 (8%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGE---VELARQLFDEMLVRDLISWNAMVSGYAQ 247
LHG + + ++ ++ + C E + AR +F+ + + WN+M+ GY+
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
+ + + L Y EM + SPD T VL +C+ L G V + + GF N ++
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
+ L++MY CG + VF+ + +VV+W + A+E F EM +GV
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV 204
Query: 368 RPDRTVFVTVLSACSHAG--LTDKGLHYFDEMERKYGLQPGPEHYS----------CLVD 415
+ + T+ V +L AC +T K H F + GL P S L+D
Sbjct: 205 KANETIMVDLLVACGRCKDIVTGKWFHGFLQ-----GLGFDPYFQSKVGFNVILATSLID 259
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAV--WGALLGACKIHKNVELAELAFEHVIEL 468
+ + G L+ A L M P+ + W +++ + + E A F +++L
Sbjct: 260 MYAKCGDLRTARYLFDGM---PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 258/464 (55%), Gaps = 11/464 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--ISYNAMISGYSLN 141
Q+HA V++ G Q + +++IS Y+ C A+RVFD IS+N+MI+G+S +
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ A LF +M+R + + T GL+S C+ H G LHG + GL+
Sbjct: 284 ELKESAFELFIQMQRHWVETDI------YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 202 ADLAVMNSFLTMYVK--CGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+ N+ ++MY++ G +E A LF+ + +DLISWN++++G+AQ G + ++ +
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
++ + D A+L SC++L +G ++ + GF SN F+ ++LI MY++CG
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Query: 320 NLARARAVFDGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
+ AR F + K S V+W A +++LF +M V+ D F +L
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
+ACSH GL +GL + ME Y +QP EHY+ VDLLGRAG + +A +LI+SM + PD
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPD 577
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
V LG C+ +E+A H++E+EP + YV LS++YSD K E V+ M
Sbjct: 578 PMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL 542
M+ER ++K PG S++E + +V F + DR++P ++IY + +L
Sbjct: 638 MKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 173/368 (47%), Gaps = 17/368 (4%)
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMF 144
H + I+ GS D Y + ++ Y K A +FDE +S+N MISGY+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
DA LF M+R GS ++F+ L+ G G +HG + G + ++
Sbjct: 83 EDAWCLFTCMKRS-GSDVDGYSFSR-----LLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
V +S + MY KC VE A + F E+ + +SWNA+++G+ Q L M+++
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 265 -RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
++ D T +L+ + + +V K+ + G + NA+I+ YA CG+++
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 324 ARAVFDGM-VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
A+ VFDG+ K ++SW + A ELF +M R V D + +LSACS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 383 --HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGR--AGRLKEAMDLIKSMKVKPD 438
+ K LH M K GL+ + L+ + + G +++A+ L +S+K K D
Sbjct: 317 GEEHQIFGKSLH---GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK-D 372
Query: 439 GAVWGALL 446
W +++
Sbjct: 373 LISWNSII 380
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 9/281 (3%)
Query: 192 HGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
H A+ G +D+ V N L Y+K G + A LFDEM RD +SWN M+SGY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
L+ MK D + +L A++ +G +V + + G+ N ++ ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM-VRSGVRPD 370
++MYA+C + A F + + + VSW A A L M +++ V D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 371 RTVFVTVLSACSHAGLTD--KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
F +L+ + K +H K GLQ + ++ G + +A
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVH---AKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 429 LIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
+ + D W +++ H EL E AFE I+++
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKH---ELKESAFELFIQMQ 297
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+WN + +++ ++A+ + ++ S +SC+ L+ G Q+HA
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALA 434
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLNSMFADA 147
++G + + SSLI MYSKC + AR+ F + + + +++NAMI GY+ + + +
Sbjct: 435 TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 494
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL---------------- 191
+ LF +M ++ + VT +++ C+ + G L
Sbjct: 495 LDLFSQMCNQN------VKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEH 548
Query: 192 HGCAV-----------------TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
+ AV + L+ D V+ +FL + CGE+E+A Q+ + +L
Sbjct: 549 YAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 605
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 277/519 (53%), Gaps = 5/519 (0%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + ++ AL L+ M + S C++L L G +HA +
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVS 149
+ Q S+L+++YSKC A VF +++ ++ISG N F +A+
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
+F M+ +D S +S M + + C L G +HG + GL ++ V +S
Sbjct: 461 VFGDMKDDDDS----LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ +Y KCG E+A ++F M ++++WN+M+S Y++N ++L++ M + + PD
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
V++ +VL + ++ + + G + + G S+ L NALI+MY +CG A +F
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
M KS+++W A+ LFDEM ++G PD F++++SAC+H+G ++
Sbjct: 637 KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
G + F+ M++ YG++P EHY+ +VDLLGRAG L+EA IK+M ++ D ++W LL A
Sbjct: 697 GKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSAS 756
Query: 450 KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPG 509
+ H NVEL L+ E ++ +EP YV L N+Y +A ++ +M+E+ L K PG
Sbjct: 757 RTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPG 816
Query: 510 CSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME 548
CS++E + +VF+SG + P EI+ + L++++++
Sbjct: 817 CSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 187/389 (48%), Gaps = 25/389 (6%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHML--RSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
AW + L K ++KEAL ++ M S +CA L G Q+H
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHG 500
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFA 145
+I+TG + + SSLI +YSKC LP +A +VF T N+ +++N+MIS YS N++
Sbjct: 501 SMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM-VAWNSMISCYSRNNLPE 559
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
++ LF M + +SV++ ++ + L G LHG + G+ +D
Sbjct: 560 LSIDLFNLMLSQG------IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTH 613
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
+ N+ + MYVKCG + A +F +M + LI+WN M+ GY +G L L+ EMK
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNLAR 323
SPD VT L+++S+C + G G + ++Q +G P + + ++++ R G L
Sbjct: 674 ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ-DYGIEPNMEHYANMVDLLGRAGLLEE 732
Query: 324 ARAVFDGM---VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR-TVFVTVLS 379
A + M D S+ W + ++++R + P+R + +V +++
Sbjct: 733 AYSFIKAMPIEADSSI--WLCLLSASRTHHNVELGILSAEKLLR--MEPERGSTYVQLIN 788
Query: 380 ACSHAGLTDKGLHYFDEMERKYGL--QPG 406
AGL ++ M+ K GL QPG
Sbjct: 789 LYMEAGLKNEAAKLLGLMKEK-GLHKQPG 816
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 200/443 (45%), Gaps = 21/443 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHML----RSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
T WN + K R++KE + +R ML R K G Q
Sbjct: 134 TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE--GKQ 191
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--ISYNAMISGYSLNS 142
+H ++R D + +++LI MY K L A RVF E + + +N MI G+ +
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ ++ L+ + +++VK S T G + C+ + G +H V GL
Sbjct: 252 ICESSLDLYMLAK----NNSVKLVSTSFT--GALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D V S L+MY KCG V A +F ++ + L WNAMV+ YA+N + L+L+ M+
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ + PD TL V+S C+ LG G V ++ + S + +AL+ +Y++CG
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV--RSGVRPDRTVFVTVLSA 380
A VF M +K +V+W + A+++F +M ++PD + +V +A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
C+ GL M K GL S L+DL + G + A+ + SM + +
Sbjct: 486 CAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMV 543
Query: 441 VWGALLGACKIHKNVELAELAFE 463
W +++ +C N L EL+ +
Sbjct: 544 AWNSMI-SCYSRNN--LPELSID 563
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 27/435 (6%)
Query: 32 NLRLMELSKQRQYKEALSLY-RHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
N + L ++ +Y +AL LY +H S K+C+ L+ G +H V+
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFD---------ETHNLPISYNAMISGYSLN 141
G + DP+ +SL++MY KC A +VFD ++ + +N+MI GY
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTV-WNSMIDGYFKF 146
Query: 142 SMFADAVSLFRRMR----REDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
F + V FRRM R D S S+ + + N G +HG +
Sbjct: 147 RRFKEGVGCFRRMLVFGVRPDAFSL------SIVVSVMCKEGNFRRE--EGKQIHGFMLR 198
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLE 256
LD D + + + MY K G A ++F E+ + +++ WN M+ G+ +G L+
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
LY K + + L +C+ G ++ + + G ++P++ +L++MY+
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 317 RCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
+CG + A VF +VDK + W A A++LF M + V PD
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
V+S CS GL + G E+ ++ +Q S L+ L + G +A + KSM+ K
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 437 PDGAVWGALL-GACK 450
D WG+L+ G CK
Sbjct: 438 -DMVAWGSLISGLCK 451
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 144/336 (42%), Gaps = 27/336 (8%)
Query: 128 PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
P S N+ I + A+ L+ + DGSS F + T L+ C+ +L
Sbjct: 24 PASINSGIRALIQKGEYLQALHLYSK---HDGSS--PFWTSVFTFPSLLKACSALTNLSY 78
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFD-------EMLVRDLISWNA 240
G +HG V G D + S + MYVKCG ++ A Q+FD + RD+ WN+
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 241 MVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL---LAVLSSCANL----GAQVVGVEVE 293
M+ GY + + + M + + PD +L ++V+ N G Q+ G +
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS-VVSWTAXXXXXXXXXXX 352
++ ++ FL ALI+MY + G A VF + DKS VV W
Sbjct: 199 NSLD-----TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGIC 253
Query: 353 XXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSC 412
+++L+ + V+ T F L ACS + + G ++ K GL P +
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV-VKMGLHNDPYVCTS 312
Query: 413 LVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
L+ + + G + EA + + S V +W A++ A
Sbjct: 313 LLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/611 (29%), Positives = 293/611 (47%), Gaps = 69/611 (11%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
+AL ++R M + +C+ L + G ++H+ ++ G D +SL+
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 106 SMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
MYSKC AR+VFD N + ++N+MI+GY A LF RM+ +
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN------ 448
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
L ++ N+ ++ Y+K G+ A
Sbjct: 449 -----------------------------------LRPNIITWNTMISGYIKNGDEGEAM 473
Query: 225 QLFDEM-----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
LF M + R+ +WN +++GY QNG LEL+ +M+ R P+ VT+L++L +
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 280 CANLGAQVVGVEVERKIEQCGFGSN----PFLTNALINMYARCGNLARARAVFDGMVDKS 335
CANL +G ++ R+I C N + NAL + YA+ G++ +R +F GM K
Sbjct: 534 CANL----LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+++W + A+ LF++M G+ P+R +++ A G D+G F
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNV 455
+ Y + P EH S +V L GRA RL+EA+ I+ M ++ + +W + L C+IH ++
Sbjct: 650 SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDI 709
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEY 515
++A A E++ LEP N ++S IY+ L R+ L+K G S++E
Sbjct: 710 DMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
Query: 516 KGKVHVFYSGDRNHPQMKEIY---RKVAELENSVMEIHRPDE---KYRVRSEELLNGNGV 569
+ +H F +GD++ +Y K++ L+N R D+ + + E G+
Sbjct: 770 RNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDN------RSDQYNGELWIEEEGREETCGI 823
Query: 570 HSERLAIAFALLSTRPG--TEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHF 627
HSE+ A+AF L+S+ T I I+KNLR+C DCH K VSK ++ D HHF
Sbjct: 824 HSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHF 883
Query: 628 RDGVCSCKDYW 638
++G CSCKDYW
Sbjct: 884 KNGDCSCKDYW 894
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 44/418 (10%)
Query: 94 SQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVSLFR 152
++PD + + L+SMY+KC AR+VFD + +++AMI YS + + + LFR
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 153 RMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLT 212
M + DG F F + + GC + G +H + G+ + L V NS L
Sbjct: 171 LMMK-DGVLPDDFLFPKI-----LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 213 MYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVT 272
+Y KCGE++ A + F M RD+I+WN+++ Y QNG +EL EM+ +SP VT
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 273 LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
++ LG +++ +K+E G ++ F
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVF-------------------------- 318
Query: 333 DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLH 392
+WTA A+++F +M +GV P+ ++ +SACS + ++G
Sbjct: 319 -----TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 393 YFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL-GACKI 451
+ K G + LVD+ + G+L++A + S+K K D W +++ G C+
Sbjct: 374 -VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMITGYCQA 431
Query: 452 HKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
+ EL F + + L P I + ++S + E + + M ++ K++++
Sbjct: 432 GYCGKAYEL-FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 9/288 (3%)
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGL--DADLAVMNSFLTMYVKCGEVELARQLFD 228
T L L+ C + G LH FGL + D+ V L+MY KCG + AR++FD
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 229 EMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
M R+L +W+AM+ Y++ V +L+ M + PD +L CAN G
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
G + + + G S ++N+++ +YA+CG L A F M ++ V++W +
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
AVEL EM + G+ P + ++ + G D + +ME +G+
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME-TFGITADVF 318
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHK 453
++ ++ L G +A+D+ + M V P+ + + AC K
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK 366
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/493 (19%), Positives = 184/493 (37%), Gaps = 107/493 (21%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
W+ + S++ +++E L+R M++ + CA G +H+ V
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAV 148
I+ G +S++++Y+KC A + F I++N+++ Y N +AV
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 149 SLFRRMRREDGS-----------------------------STVKFNFNSVTMLGLVSGC 179
L + M +E S T + T ++SG
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 180 --------------------NLPNHLPTGTCLHGCA---------------VTFGLDADL 204
+PN + + + C+ V G D+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
V NS + MY KCG++E AR++FD + +D+ +WN+M++GY Q G+ + EL+ M+
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
+ P+ +T N +I+ Y + G+ A
Sbjct: 448 NLRPNIITW-----------------------------------NTMISGYIKNGDEGEA 472
Query: 325 RAVF-----DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+F DG V ++ +W A+ELF +M S P+ +++L
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
AC++ L K + + L + L D ++G ++ + + M+ K D
Sbjct: 533 ACANL-LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK-DI 590
Query: 440 AVWGALLGACKIH 452
W +L+G +H
Sbjct: 591 ITWNSLIGGYVLH 603
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T WNL + + + EAL L+R M S +CA L ++H
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG 548
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF--DETHNLPISYNAMISGYSLNSMFA 145
V+R +++L Y+K +R +F ET ++ I++N++I GY L+ +
Sbjct: 549 CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDI-ITWNSLIGGYVLHGSYG 607
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTFGLDADL 204
A++LF +M+ T N T+ ++ L ++ G + A + + L
Sbjct: 608 PALALFNQMK------TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPAL 661
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEMKL 263
++ + +Y + +E A Q EM ++ + W + ++G +G + ++ L
Sbjct: 662 EHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDID--MAIHAAENL 719
Query: 264 RRMSPDPVTLLAVLSSCANLGAQV 287
+ P+ +++S LGA++
Sbjct: 720 FSLEPENTATESIVSQIYALGAKL 743
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 252/483 (52%), Gaps = 28/483 (5%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSM 143
+HA +IRT D + LI + S A VF N + Y AMI G+ +
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 144 FADAVSLFRRMR-----------------------REDGSSTVKFNFNSVTMLGLVSGCN 180
AD VSL+ RM RE + +K F S +GL
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKM--- 164
Query: 181 LPNHLPTGTCLHGCAVTFGL-DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWN 239
+ + +G ++ + + D D + Y +CG ++ A +LF ++ ++D + W
Sbjct: 165 MEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWT 224
Query: 240 AMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQC 299
AM+ G +N + LEL+ EM++ +S + T + VLS+C++LGA +G V +E
Sbjct: 225 AMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQ 284
Query: 300 GFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELF 359
+ F+ NALINMY+RCG++ AR VF M DK V+S+ A+ F
Sbjct: 285 RMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEF 344
Query: 360 DEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGR 419
+MV G RP++ V +L+ACSH GL D GL F+ M+R + ++P EHY C+VDLLGR
Sbjct: 345 RDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGR 404
Query: 420 AGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLL 479
GRL+EA I+++ ++PD + G LL ACKIH N+EL E + + E E + G YVLL
Sbjct: 405 VGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLL 464
Query: 480 SNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKV 539
SN+Y+ + + +R MR+ + K+PGCS +E ++H F GD HP + IY+++
Sbjct: 465 SNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRL 524
Query: 540 AEL 542
EL
Sbjct: 525 QEL 527
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 47/316 (14%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
+ T W + L + ++ +AL L+R M + +C+ L G
Sbjct: 217 IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRW 276
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSM 143
+H+ V + + ++LI+MYS+C ARRVF + ISYN MISG +++
Sbjct: 277 VHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA 336
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+A++ FR M F N VT++ L++ C+ HG + GL+
Sbjct: 337 SVEAINEFRDMVNR------GFRPNQVTLVALLNACS-----------HGGLLDIGLE-- 377
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
V NS ++ + Q+ + DL+ G R+ E Y ++
Sbjct: 378 --VFNSMKRVF------NVEPQIEHYGCIVDLL------------GRVGRLEEAYRFIEN 417
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI---EQCGFGSNPFLTNALINMYARCGN 320
+ PD + L +LS+C G +G ++ +++ E G+ L+ N+YA G
Sbjct: 418 IPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLS----NLYASSGK 473
Query: 321 LARARAVFDGMVDKSV 336
+ + + M D +
Sbjct: 474 WKESTEIRESMRDSGI 489
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 272/526 (51%), Gaps = 24/526 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHA 87
W+ + K +A+ +R M+ +S +C LS G +H
Sbjct: 128 VTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL--------PISYNAMISGYS 139
VIR G D +SL++ Y+K R F E NL IS++ +I+ Y
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAK-------SRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
N A+A+ +F M +DG+ N T+L ++ C + L G H A+ G
Sbjct: 241 QNGAAAEALLVFNDMM-DDGTEP-----NVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L+ ++ V + + MY+KC E A +F + +D++SW A++SG+ NG A R +E +
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFS 354
Query: 260 EMKLRRMS-PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
M L + PD + ++ VL SC+ LG + + GF SNPF+ +L+ +Y+RC
Sbjct: 355 IMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRC 414
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTV 377
G+L A VF+G+ K V WT+ A+E F+ MV+S V+P+ F+++
Sbjct: 415 GSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSI 474
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
LSACSHAGL +GL F M Y L P EHY+ LVDLLGR G L A+++ K M P
Sbjct: 475 LSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSP 534
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
+ G LLGAC+IH+N E+AE + + ELE + GYY+L+SN+Y E V ++R
Sbjct: 535 TPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRN 594
Query: 498 MMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELE 543
+++R ++K S +E + KVH F + D HP+ + +Y + EL+
Sbjct: 595 SVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELD 640
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 224/482 (46%), Gaps = 17/482 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV- 89
WN L LS+++Q++E L + HM R K+C L G +H V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 90 --IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFAD 146
+ GS D Y SSLI MY KC A R+FDE I ++++M+SG+ N
Sbjct: 88 KDVTLGS--DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 145
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
AV FRRM + + VT++ LVS C ++ G C+HG + G DL++
Sbjct: 146 AVEFFRRMVMASDVTP-----DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+NS L Y K + A LF + +D+ISW+ +++ Y QNG AA L ++++M
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
P+ T+L VL +CA G + + G + ++ AL++MY +C + A A
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 320
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM-VRSGVRPDRTVFVTVLSACSHAG 385
VF + K VVSW A ++E F M + + RPD + V VL +CS G
Sbjct: 321 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 380
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
++ F KYG P + LV+L R G L A + + +K D VW +L
Sbjct: 381 FLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSL 438
Query: 446 LGACKIHKNVELAELAFEHVI---ELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRER 502
+ IH A F H++ E++P + + +LS EG+ ++M+ +
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 498
Query: 503 KL 504
+L
Sbjct: 499 RL 500
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 170/349 (48%), Gaps = 19/349 (5%)
Query: 117 ARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
AR++F E T +N ++ S + + + F M R++ ++ T+
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP------DNFTLPVA 66
Query: 176 VSGCNLPNHLPTGTCLHGCA---VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV 232
+ C + G +HG VT G +DL V +S + MY+KCG + A ++FDE+
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 233 RDLISWNAMVSGYAQNGHAARVLELYHEMKL-RRMSPDPVTLLAVLSSCANLGAQVVGVE 291
D+++W++MVSG+ +NG + +E + M + ++PD VTL+ ++S+C L +G
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXX 351
V + + GF ++ L N+L+N YA+ A +F + +K V+SW+
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 352 XXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYS 411
A+ +F++M+ G P+ + VL AC+ A ++G + RK GL+ + +
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVST 303
Query: 412 CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKI----HKNVE 456
LVD+ + +EA + + K D W AL+ + H+++E
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIE 351
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 258/494 (52%), Gaps = 45/494 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYSLNS 142
QLHAH +RTG T+ L + +L + AR++FD N YN +I Y ++
Sbjct: 6 QLHAHCLRTGVDE---TKDLLQRLLLIPNLVY-ARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+++ L+ + DG FN + P L LH G ++
Sbjct: 62 QPHESIVLYNLLSF-DGLRPSHHTFNFIFAASASFSSARPLRL-----LHSQFFRSGFES 115
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM- 261
D + +T Y K G + AR++FDEM RD+ WNAM++GY + G +EL+ M
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 262 -------------------------------KLRRMSPDPVTLLAVLSSCANLGAQVVGV 290
K + + P+ +T+++VL +CANLG +G
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD-KSVVSWTAXXXXXXXX 349
+E + GF N ++ NA I MY++CG + A+ +F+ + + +++ SW +
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
A+ LF +M+R G +PD FV +L AC H G+ KG F ME + + P EH
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
Y C++DLLGR G+L+EA DLIK+M +KPD VWG LLGAC H NVE+AE+A E + +LE
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 470 PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSY-VEYKGKVHVFYSGDRN 528
PTN G V++SNIY+ + +GVLR+R +M++ + K G SY VE VH F D++
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS 475
Query: 529 HPQMKEIYRKVAEL 542
HP+ EIY+ + E+
Sbjct: 476 HPRSYEIYQVLEEI 489
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 51/300 (17%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLPLTG 82
P T+W + S+ Y EAL ++ M + S +CA L G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--ISYNAMISGYSL 140
+L + G + Y ++ I MYSKC + +A+R+F+E N S+N+MI +
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ +A++LF +M RE ++VT +GL+ C+HG V G
Sbjct: 295 HGKHDEALTLFAQMLREGEKP------DAVTFVGLLLA-----------CVHGGMVVKGQ 337
Query: 201 DADLAVMNSFLTMYVKCGEV-ELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+ ++ EV +++ +L + DL+ G ++ E Y
Sbjct: 338 E-----------LFKSMEEVHKISPKLEHYGCMIDLL------------GRVGKLQEAYD 374
Query: 260 EMKLRRMSPDPVTLLAVLSSCA---NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
+K M PD V +L +C+ N+ + E K+E +NP + N+YA
Sbjct: 375 LIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP----TNPGNCVIMSNIYA 430
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 291/580 (50%), Gaps = 40/580 (6%)
Query: 23 HPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTG 82
HP+ WN+ + +K ++E ++ Y+ M+ K+C G
Sbjct: 108 HPL----PWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLN 141
+H + + + Y ++LISMY + +ARR+FD +S+NA+I+ Y+
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 142 SMFADAVSLFRRMRREDGS-STVKFNF---------NSVTMLGLVS-------------- 177
M+++A LF +M S + +N N V LGL+S
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAM 283
Query: 178 -----GCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV 232
C+L + G +HG A+ D V N+ +TMY KC ++ A +F +
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE 343
Query: 233 RDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEV 292
L +WN+++SGYAQ + L EM + P+ +TL ++L CA + G E
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 293 ERKI--EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
I +C F L N+L+++YA+ G + A+ V D M + V++T+
Sbjct: 404 HCYILRRKC-FKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+ LF EM RSG++PD V VLSACSH+ L +G F +M+ +YG++P +H+
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
SC+VDL GRAG L +A D+I +M KP GA W LL AC IH N ++ + A E ++E++P
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Query: 471 TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
N GYYVL++N+Y+ A + + VR +MR+ ++KDPGC++++ +F GD + P
Sbjct: 583 ENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Query: 531 QMKEIYRKVAELENSVMEIHRPDEKYRVRS--EELLNGNG 568
+ Y + L N +M+ + +V+S EELL G
Sbjct: 643 EACNTYPLLDGL-NQLMKDNAGYAINKVQSSDEELLQEMG 681
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 175/398 (43%), Gaps = 45/398 (11%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PIS 130
+C + L G Q+HAH I +G + L++ YS +L A+ + + + L P+
Sbjct: 52 ACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP 111
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+N +I+ Y+ N +F + ++ ++RM + G F + SV + C + G
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSK-GIRPDAFTYPSV-----LKACGETLDVAFGRV 165
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+HG + L V N+ ++MY + + +AR+LFD M RD +SWNA+++ YA G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 251 AARVLELYHEMK------------------------------LRRM-----SPDPVTLLA 275
+ EL+ +M + RM S DPV ++
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
L +C+ +GA +G E+ + + N LI MY++C +L A VF + S
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+ +W + A L EM+ +G +P+ ++L C+ G +
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRL---KEAMDLI 430
+ R+ + ++ LVD+ ++G++ K+ DL+
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
DA F +R + SS V + + L+S C G +H ++ G++
Sbjct: 21 DAFKTFSLLRLQS-SSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSV 79
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
++ +T Y A+ + + + + WN +++ YA+N V+ Y M +
Sbjct: 80 LVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKG 139
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ PD T +VL +C G V IE + S+ ++ NALI+MY R N+ AR
Sbjct: 140 IRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIAR 199
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
+FD M ++ VSW A A ELFD+M SGV + + C G
Sbjct: 200 RLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 279/580 (48%), Gaps = 52/580 (8%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXX---------XXXXXKSCAI 75
V ++N L+ + + Y +A SL+ + SS C
Sbjct: 85 VRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDD 144
Query: 76 LSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAM 134
L Q+H VIR G D + + +I+ Y+KC AR+VFDE + +S+N+M
Sbjct: 145 FWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSM 204
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
ISGYS + F D +++ M + F N VT++ + C + L G +H
Sbjct: 205 ISGYSQSGSFEDCKKMYKAML-----ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 195 AVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD-------------------- 234
+ + DL++ N+ + Y KCG ++ AR LFDEM +D
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEA 319
Query: 235 -----------LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANL 283
L +WNAM+SG QN H V+ + EM P+ VTL ++L S
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYS 379
Query: 284 GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXX 343
G E+ + G +N ++T ++I+ YA+ G L A+ VFD D+S+++WTA
Sbjct: 380 SNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAII 439
Query: 344 XXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGL 403
A LFD+M G +PD VLSA +H+G +D H FD M KY +
Sbjct: 440 TAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDI 499
Query: 404 QPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFE 463
+PG EHY+C+V +L RAG+L +AM+ I M + P VWGALL + ++E+A A +
Sbjct: 500 EPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACD 559
Query: 464 HVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFY 523
+ E+EP N G Y +++N+Y+ A E VR M+ L+K PG S++E + + F
Sbjct: 560 RLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFI 619
Query: 524 SGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVRSEEL 563
+ D + + KE+Y + L S+ D++Y +R +EL
Sbjct: 620 AKDSSCERSKEMYEIIEGLVESM-----SDKEY-IRKQEL 653
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 176/352 (50%), Gaps = 10/352 (2%)
Query: 78 LPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMIS 136
LPL QLHA ++ +PD + S LIS Y++ A VFDE T SYNA++
Sbjct: 37 LPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLI 96
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTM---LGLVSGCNLPNHLPTGTCLHG 193
Y+ M+ DA SLF S+ +S+++ L +SGC+ +HG
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAAR 253
+ G D+D+ V N +T Y KC +E AR++FDEM RD++SWN+M+SGY+Q+G
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 254 VLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALI 312
++Y M P+ VT+++V +C + G+EV +K+ + + L NA+I
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 313 NMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
YA+CG+L ARA+FD M +K V++ A A+ LF EM G+
Sbjct: 277 GFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
+ ++ H ++ ++ F EM R G +P S L+ L + LK
Sbjct: 337 MISGLMQNNHH----EEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLK 383
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 267/528 (50%), Gaps = 9/528 (1%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P T W+ + + + + +EA+ ++ LR ++ + G
Sbjct: 180 PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
Query: 84 --QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSL 140
Q+H I+ G ++L++MYSKC A ++FD + + I+++AM++GYS
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N +AV LF RM S+ +K + T++G+++ C+ +L G LH + G
Sbjct: 300 NGESLEAVKLFSRMF----SAGIKPS--EYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ L + + MY K G + AR+ FD + RD+ W +++SGY QN L LY
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
MK + P+ T+ +VL +C++L +G +V + GFG + +AL MY++CG+
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
L VF +K VVSW A A+ELF+EM+ G+ PD FV ++SA
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH G ++G YF+ M + GL P +HY+C+VDLL RAG+LKEA + I+S +
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLC 593
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
+W LL ACK H EL A E ++ L YV LS IY+ V RV MR
Sbjct: 594 LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMR 653
Query: 501 ERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVME 548
+ K+ GCS++E K + HVF GD HP ++E V + ++E
Sbjct: 654 ANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIE 701
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 13/438 (2%)
Query: 48 LSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISM 107
+ L+R M K+ + L G Q HA V++ S D Y +SL+ M
Sbjct: 103 MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGM 162
Query: 108 YSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRRE-DGSSTVKF 165
Y K L +VF +++ M+SGY+ +A+ +F RE + S +
Sbjct: 163 YCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY 222
Query: 166 NFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQ 225
F +V +S ++ G +H + GL +A+ N+ +TMY KC + A +
Sbjct: 223 VFTAV-----LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA 285
+FD R+ I+W+AMV+GY+QNG + ++L+ M + P T++ VL++C+++
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
G ++ + + GF + F T AL++MYA+ G LA AR FD + ++ V WT+
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 346 XXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLH-YFDEMERKYGLQ 404
A+ L+ M +G+ P+ +VL ACS + G + ++ +GL+
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
S L + + G L++ +L+ D W A++ + + A FE
Sbjct: 458 VPIG--SALSTMYSKCGSLEDG-NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEE 514
Query: 465 VIE--LEPTNIGYYVLLS 480
++ +EP ++ + ++S
Sbjct: 515 MLAEGMEPDDVTFVNIIS 532
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 179/381 (46%), Gaps = 30/381 (7%)
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGY 138
+ G +H +IRTG+ + L++ Y+KC A +F+ +S+N++I+GY
Sbjct: 31 VAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGY 90
Query: 139 SLNSMFADA---VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
S N + + + LFR MR +D N+ T+ G+ + G H
Sbjct: 91 SQNGGISSSYTVMQLFREMRAQD------ILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG---HAA 252
V D+ V S + MY K G VE ++F M R+ +W+ MVSGYA G A
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 253 RVLELYHEMKLRRMSPDPVTLLAVLSSCA-----NLGAQVVGVEVERKIEQCGFGSNPFL 307
+V L+ K D V AVLSS A LG Q+ + ++ + GF + L
Sbjct: 205 KVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGL--LGFVA---L 258
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
+NAL+ MY++C +L A +FD D++ ++W+A AV+LF M +G+
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 368 RPDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
+P V VL+ACS ++G LH F K G + + LVD+ +AG L +
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSF---LLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 426 AMDLIKSMKVKPDGAVWGALL 446
A ++ + D A+W +L+
Sbjct: 376 ARKGFDCLQ-ERDVALWTSLI 395
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 112/224 (50%), Gaps = 7/224 (3%)
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
+ N ++ T+L ++ + +L G +HG + G + N + Y KCG++
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAAR---VLELYHEMKLRRMSPDPVTLLAVLSS 279
A +F+ ++ +D++SWN++++GY+QNG + V++L+ EM+ + + P+ TL + +
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSW 339
++L + VG + + + + ++ +L+ MY + G + VF M +++ +W
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 340 TAXXXXXXXXXXXXXAVELFDEMVR---SGVRPDRTVFVTVLSA 380
+ A+++F+ +R G D VF VLS+
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSS 230
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 255/493 (51%), Gaps = 18/493 (3%)
Query: 30 AWNLRLMELSKQRQ--YKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+WN L SK + Y + L LY M R K+C L L G +H
Sbjct: 74 SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG 133
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS----YNAMISGYSLNSM 143
++ G D Y SL+ MY++ A++VFDE +P+ + ++ GY S
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDE---IPVRNSVLWGVLMKGYLKYSK 190
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV--TFGLD 201
+ LF MR +++T++ LV C G C+HG ++ +F +D
Sbjct: 191 DPEVFRLFCLMR------DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF-ID 243
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ S + MYVKC ++ AR+LF+ + R+++ W ++SG+A+ A +L+ +M
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ P+ TL A+L SC++LG+ G V + + G + + I+MYARCGN+
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
AR VFD M +++V+SW++ A++ F +M V P+ FV++LSAC
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV 441
SH+G +G F+ M R YG+ P EHY+C+VDLLGRAG + EA I +M VKP +
Sbjct: 424 SHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASA 483
Query: 442 WGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
WGALL AC+IHK V+LA E ++ +EP YVLLSNIY+DA E V VR M
Sbjct: 484 WGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGI 543
Query: 502 RKLRKDPGCSYVE 514
+ RK G S E
Sbjct: 544 KGYRKHVGQSATE 556
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 13/297 (4%)
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
+L ++S NH +H + G + ++ + +S Y++ ++ A F+ +
Sbjct: 9 ALLTILSQAKTLNHTQQ---VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRI 65
Query: 231 --LVRDLISWNAMVSGYAQNGHA--ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQ 286
R+ SWN ++SGY+++ + VL LY+ M+ D L+ + +C LG
Sbjct: 66 PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 287 VVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXX 346
G+ + + G + ++ +L+ MYA+ G + A+ VFD + ++ V W
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY 185
Query: 347 XXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH--AGLTDKGLHYFDEMERKYGLQ 404
LF M +G+ D + ++ AC + AG K +H + R + Q
Sbjct: 186 LKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV-SIRRSFIDQ 244
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL-GACKIHKNVELAEL 460
S ++D+ + L A L ++ V + +W L+ G K + VE +L
Sbjct: 245 SDYLQAS-IIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAKCERAVEAFDL 299
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 280/529 (52%), Gaps = 17/529 (3%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+W + ++ ++AL + M++S SC ++ L G +H
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 90 IRTGSQPDPYTRS-SLISMYSKC----SLPFLARRVFDETHNLPISYNAMISGYSLNSMF 144
+R P+ + S +L+ +Y++C + R V D +++N++IS Y+ M
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN---IVAWNSLISLYAHRGMV 386
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
A+ LFR+M T + ++ T+ +S C +P G +HG + + +D
Sbjct: 387 IQALGLFRQM------VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDE 439
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
V NS + MY K G V+ A +F+++ R +++WN+M+ G++QNG++ + L+ M
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 265 RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA 324
+ + VT LAV+ +C+++G+ G V K+ G + F ALI+MYA+CG+L A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558
Query: 325 RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA 384
VF M +S+VSW++ A+ F++MV SG +P+ VF+ VLSAC H+
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 385 GLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGA 444
G ++G +YF+ M + +G+ P EH++C +DLL R+G LKEA IK M D +VWG+
Sbjct: 619 GSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 445 LLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
L+ C+IH+ +++ + + ++ + GYY LLSNIY++ E R+R M+ L
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 505 RKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPD 553
+K PG S +E KV F +G+ N Q EIYR + L+N E H D
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVVD 786
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 217/474 (45%), Gaps = 52/474 (10%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGS-QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI 129
+SC+ L L QLHAH++ TG + DP + LI Y+ P +R VF E P
Sbjct: 9 RSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVF-EAFPYPD 64
Query: 130 S--YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
S Y +I + A+ L+ R+ E + KF F SV L + HL
Sbjct: 65 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSET-TQISKFVFPSV----LRACAGSREHLSV 119
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
G +HG + G+D D + S L MY + G + A ++FD M VRDL++W+ +VS +
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
NG + L ++ M + PD VT+++V+ CA LG + V +I + F + L
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
N+L+ MY++CG+L + +F+ + K+ VSWTA A+ F EM++SG+
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 368 RPDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYS-CLVDLLGRAGRLK 424
P+ +VLS+C GL +G +H F + R+ L P E S LV+L G+L
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGF-AVRRE--LDPNYESLSLALVELYAECGKLS 356
Query: 425 -------------------------------EAMDLIKSM---KVKPDGAVWGALLGACK 450
+A+ L + M ++KPD + + AC+
Sbjct: 357 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 416
Query: 451 IHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
V L + HVI + ++ L ++YS + + + V ++ R +
Sbjct: 417 NAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 217/463 (46%), Gaps = 18/463 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV AW+ + + + +AL +++ M+ + CA L
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
+H + R D +SL++MYSKC + R+F++ +S+ AMIS Y+
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
A+ F M + S ++ N VT+ ++S C L + G +HG AV LD
Sbjct: 283 FSEKALRSFSEMIK----SGIEPNL--VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 203 DLAVMN-SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ ++ + + +Y +CG++ + + R++++WN+++S YA G + L L+ +M
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+R+ PD TL + +S+C N G +G ++ + + S+ F+ N+LI+MY++ G++
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSV 455
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
A VF+ + +SVV+W + A+ LFD M S + + F+ V+ AC
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHY--SCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
S G +KG + K + + + + L+D+ + G L A + ++M +
Sbjct: 516 SSIGSLEKG----KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
+ +++ A +H + A F ++E +P + + +LS
Sbjct: 572 SW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLS 613
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/659 (28%), Positives = 319/659 (48%), Gaps = 51/659 (7%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLR-SSXXXXXXXXXXXXKSCAILSLPLTG 82
P +WN + L K+ + +A L+ M R SC S+ L G
Sbjct: 245 PQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKC-----------------SLPFL--------- 116
+LH IR G + ++LI YSK ++ F
Sbjct: 305 RELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 117 -----ARRVF-DETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSV 170
A +F + T I+YNA+++G+ N A+ LF M + G F+ S
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR-GVELTDFSLTSA 423
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
V C L + +HG + FG + + + L M +C + A ++FD+
Sbjct: 424 -----VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 231 LVRDLISWNA---MVSGYAQNGHAARVLELYHE-MKLRRMSPDPVTLLAVLSSCANLGAQ 286
+L S A ++ GYA+NG + + L+H + +++ D V+L +L+ C LG +
Sbjct: 479 -PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 287 VVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXX 346
+G ++ + G+ S+ L N+LI+MYA+C + A +F+ M + V+SW +
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 347 XXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC--SHAGLTDKGLHYFDEMERKYGLQ 404
A+ L+ M ++PD V+SA + + F M+ Y ++
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
P EHY+ V +LG G L+EA D I SM V+P+ +V ALL +C+IH N +A+ +
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKL 717
Query: 465 VIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYS 524
++ +P Y+L SNIYS + +R MRER RK P S++ ++ K+H F++
Sbjct: 718 ILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHA 777
Query: 525 GDRNHPQMKEIYRKVAELENSVMEI-HRPDEKYRVRS-EELLNGNGV--HSERLAIAFAL 580
D +HPQ K+IYR + L +++ + P+ +Y ++ +E + + + HS +LA+ + +
Sbjct: 778 RDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGI 837
Query: 581 LSTRP-GTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
LS+ G + +MKN+ +C DCH F K +S +V R+ ++RD++ FHHF +G CSC+D W
Sbjct: 838 LSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 168/374 (44%), Gaps = 25/374 (6%)
Query: 102 SSLISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYSLNSMFADAVSLFRRMRREDGS 160
++LIS Y K P A VF + +SY A+ISG+S ++ +A+ +F RMR+
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 161 STVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVK---- 216
N T + +++ C + G +HG V G + V NS +++Y K
Sbjct: 178 QP-----NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGS 232
Query: 217 -CGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLL 274
C +V +LFDE+ RD+ SWN +VS + G + + +L++EM ++ D TL
Sbjct: 233 SCDDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLS 289
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK 334
+LSSC + + G E+ + + G + NALI Y++ ++ + ++++ M+ +
Sbjct: 290 TLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
Query: 335 SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYF 394
V++T AVE+F + + + +++ G K L F
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTEK----NTITYNALMAGFCRNGHGLKALKLF 405
Query: 395 DEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA----VWGALLGACK 450
+M ++ G++ + VD G K+ + I +K A + ALL C
Sbjct: 406 TDMLQR-GVELTDFSLTSAVDACGLVSE-KKVSEQIHGFCIKFGTAFNPCIQTALLDMCT 463
Query: 451 IHKNVELAELAFEH 464
+ + AE F+
Sbjct: 464 RCERMADAEEMFDQ 477
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 180/427 (42%), Gaps = 58/427 (13%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL--ARRVFDETHNLPI 129
+C +S G Q+H ++++G + +SL+S+Y K S ++FDE +
Sbjct: 190 ACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDV 249
Query: 130 -SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
S+N ++S A LF M R +G F +S T+ L+S C + L G
Sbjct: 250 ASWNTVVSSLVKEGKSHKAFDLFYEMNRVEG-----FGVDSFTLSTLLSSCTDSSVLLRG 304
Query: 189 TCLHGCAVTFGLDADLAVMNSF-------------------------------LTMYVKC 217
LHG A+ GL +L+V N+ +T Y+
Sbjct: 305 RELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 218 GEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVL 277
G V+ A ++F + ++ I++NA+++G+ +NGH + L+L+ +M R + +L + +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 278 SSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM---VDK 334
+C + + V ++ + G NP + AL++M RC +A A +FD +D
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDS 484
Query: 335 SVVSWTAXXXXXXXXXXXXXAVELFDE-MVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
S + T+ AV LF + + D +L+ C G + G
Sbjct: 485 SKAT-TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Query: 394 FDEMERKYGLQPGPEHYS------CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
Y L+ G ++S L+ + + +A+ + +M+ + D W +L+
Sbjct: 544 -----HCYALKAG--YFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLIS 595
Query: 448 ACKIHKN 454
+ +N
Sbjct: 596 CYILQRN 602
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 290/569 (50%), Gaps = 26/569 (4%)
Query: 74 AILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL-ARRVFDE--THNLPIS 130
A+ SL G Q+H+ I+ G + ++L+ MY KCS + A RVF + N+ +S
Sbjct: 337 AVRSLDF-GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV-VS 394
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+ +I G + D L M + + N VT+ G++ C+ H+
Sbjct: 395 WTTLILGLVDHGFVQDCFGLLMEMVKREVEP------NVVTLSGVLRACSKLRHVRRVLE 448
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+H + +D ++ V NS + Y +V+ A + M RD I++ ++V+ + + G
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
L + + M + D ++L +S+ ANLGA G + + GF + N+
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS 568
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
L++MY++CG+L A+ VF+ + VVSW A+ F+EM PD
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
F+ +LSACS+ LTD GL YF M++ Y ++P EHY LV +LGRAGRL+EA ++
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVV 688
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSE 490
++M +KP+ ++ LL AC+ N+ L E + L P++ Y+LL+++Y ++ E
Sbjct: 689 ETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPE 748
Query: 491 GVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNH-PQMKEIYRKVAELENSVMEI 549
+ R +M E++L K G S VE +GKVH F S D + IY AE+E+ EI
Sbjct: 749 LAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIY---AEIESIKEEI 805
Query: 550 HRPDEKYRVRSEELLNGN---GVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMK 606
R YR GN HS + A+ + + P + ++KN +C DCH F+
Sbjct: 806 KRFGSPYR--------GNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVS 857
Query: 607 LVSKIVNRQFIIRDATRFHHFRDGVCSCK 635
+++++V+++ +RD + H F++G CSCK
Sbjct: 858 ILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 200/457 (43%), Gaps = 13/457 (2%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T +W + + L R+++EAL Y M+++ + + L L G +H+
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF-GKTIHS 248
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFAD 146
++I G + ++SL+ YS+ S A RV + + + + +++SG+ N +
Sbjct: 249 NIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE 308
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
AV F MR ++ N+ T ++S C+ L G +H + G + V
Sbjct: 309 AVGTFLEMR------SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 207 MNSFLTMYVKCGEVEL-ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
N+ + MY+KC E+ A ++F M+ +++SW ++ G +G L EM R
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ P+ VTL VL +C+ L +E+ + + + N+L++ YA + A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
V M + +++T+ A+ + + M G+R D+ +SA ++ G
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
+ G H K G + LVD+ + G L++A + + + PD W L
Sbjct: 543 ALETGKH-LHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGL 600
Query: 446 LGACKIHKNVELAELAFEH--VIELEPTNIGYYVLLS 480
+ + + A AFE + E EP ++ + +LLS
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 183/407 (44%), Gaps = 10/407 (2%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
AW + + +K +++ ALSL+ M+ S +SCA L G ++H V
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADAV 148
I+TG + + SSL +YSKC A +F N IS+ MIS + +A+
Sbjct: 151 IKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREAL 210
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
+ M + G +F F V +LG S L G +H + G+ ++ +
Sbjct: 211 QFYSEMVKA-GVPPNEFTF--VKLLGASSFLGLE----FGKTIHSNIIVRGIPLNVVLKT 263
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
S + Y + ++E A ++ + +D+ W ++VSG+ +N A + + EM+ + P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC-GNLARARAV 327
+ T A+LS C+ + + G ++ + + GF + + NAL++MY +C + A V
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
F MV +VVSWT L EMV+ V P+ VL ACS
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
+ L + R++ + + LVD + ++ A ++I+SMK
Sbjct: 444 RRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 160/366 (43%), Gaps = 9/366 (2%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSL 140
G +H VI+ G + ++L+S+Y K + AR++FDE +H ++ MIS ++
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ FA A+SLF M G+ +F F+SV V C + G +HG + G
Sbjct: 102 SQEFASALSLFEEM-MASGTHPNEFTFSSV-----VRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ + V +S +Y KCG+ + A +LF + D ISW M+S L+ Y E
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M + P+ T + +L + + LG + G + I G N L +L++ Y++
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ A V + ++ V WT+ AV F EM G++P+ + +LS
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CS D G + K G + + + LVD+ + + + V P+
Sbjct: 335 CSAVRSLDFGKQIHSQT-IKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVV 393
Query: 441 VWGALL 446
W L+
Sbjct: 394 SWTTLI 399
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 143/300 (47%), Gaps = 5/300 (1%)
Query: 183 NHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMV 242
N G +H + FGL +L + N+ L++Y+K + AR+LFDEM R + +W M+
Sbjct: 37 NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMI 96
Query: 243 SGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFG 302
S + ++ A L L+ EM P+ T +V+ SCA L G V + + GF
Sbjct: 97 SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE 156
Query: 303 SNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM 362
N + ++L ++Y++CG A +F + + +SWT A++ + EM
Sbjct: 157 GNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM 216
Query: 363 VRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGR 422
V++GV P+ FV +L A S GL + + + R G+ + LVD + +
Sbjct: 217 VKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSK 274
Query: 423 LKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV--IELEPTNIGYYVLLS 480
+++A+ ++ S + D +W +++ + + A F + + L+P N Y +LS
Sbjct: 275 MEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
+LS C + +++ G+ + + + G N L N L+++Y + + AR +FD M ++
Sbjct: 30 ILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
V +WT A+ LF+EM+ SG P+ F +V+ +C AGL D + Y
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRD--ISYGG 144
Query: 396 EMER---KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW----GALLGA 448
+ K G + S L DL + G+ KEA +L S++ D W +L+GA
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISSLVGA 203
Query: 449 CK 450
K
Sbjct: 204 RK 205
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
KR T+ R EL K ++ ALS+ +M + A L
Sbjct: 489 KRRDNITYTSLVTRFNELGK---HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYS 139
TG LH + +++G +SL+ MYSKC A++VF+E +S+N ++SG +
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
N + A+S F MR ++ +SVT L L+S C+
Sbjct: 606 SNGFISSALSAFEEMRMKETEP------DSVTFLILLSACS 640
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 267/540 (49%), Gaps = 19/540 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P+ + N+ + R+ + L + ML S C L
Sbjct: 117 PMRDVISQNIVFYGFLRNRETESGFVLLKRML-GSGGFDHATLTIVLSVCDTPEFCLVTK 175
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
+HA I +G + + LI+ Y KC R VFD +H I+ A+ISG N
Sbjct: 176 MIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ D + LF MRR + NSVT L ++ C+ + G +H +G+++
Sbjct: 236 LHEDGLRLFSLMRRG------LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIES 289
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
+L + ++ + MY KCG +E A +F+ D +S ++ G AQNG ++ + M
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 263 LRRMSPDPVTLLAVLS-----SCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ D + AVL + LG Q+ + ++RK F N F+ N LINMY++
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK-----FSGNTFVNNGLINMYSK 404
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG+L ++ VF M ++ VSW + A++L++EM V+P F+++
Sbjct: 405 CGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 464
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
L ACSH GL DKG +EM+ +G++P EHY+C++D+LGRAG LKEA I S+ +KP
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 524
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
D +W ALLGAC H + E+ E A E + + P + ++L++NIYS + +
Sbjct: 525 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Query: 498 MMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL-ENSVMEIHRPDEKY 556
M+ + K+ G S +E + K H F D+ HPQ + IY ++ L V E +RPD+++
Sbjct: 585 RMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRF 644
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 193/421 (45%), Gaps = 34/421 (8%)
Query: 78 LPLTGFQLHAHVIRTGSQPDPY----------TRSSLISMYSKCSLPFLARRVFDETHNL 127
P G LHA +I+ +P +SL+S+Y+KC A ++FDE +
Sbjct: 60 FPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDE---M 116
Query: 128 P----ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPN 183
P IS N + G+ N L +RM G F+ T+ ++S C+ P
Sbjct: 117 PMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG-------FDHATLTIVLSVCDTPE 169
Query: 184 HLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVS 243
+H A+ G D +++V N +T Y KCG R +FD M R++I+ A++S
Sbjct: 170 FCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVIS 229
Query: 244 GYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGS 303
G +N L L+ M+ + P+ VT L+ L++C+ V G ++ + + G S
Sbjct: 230 GLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIES 289
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV 363
+ +AL++MY++CG++ A +F+ + VS T A++ F M+
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 364 RSGVRPDRTVFVTVLSAC---SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRA 420
++GV D V VL + GL K LH ++RK+ + L+++ +
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGL-GKQLHSL-VIKRKFSGNTFVNN--GLINMYSKC 405
Query: 421 GRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV--IELEPTNIGYYVL 478
G L ++ + + M K + W +++ A H + A +E + +E++PT++ + L
Sbjct: 406 GDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 464
Query: 479 L 479
L
Sbjct: 465 L 465
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 189/461 (40%), Gaps = 37/461 (8%)
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP-TGTCLHGCAVTFG-----LDAD---- 203
+R+ F N V M L+S C P G CLH + +DAD
Sbjct: 29 IRQSPNYQVSTFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRN 88
Query: 204 -LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
L V NS L++Y KCG++ A +LFDEM +RD+IS N + G+ +N L M
Sbjct: 89 ALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM- 147
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
L D TL VLS C +V + G+ + N LI Y +CG
Sbjct: 148 LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
R VFDGM ++V++ TA + LF M R V P+ +++ L+ACS
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
+ +G + KYG++ S L+D+ + G +++A + +S + ++
Sbjct: 268 GSQRIVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 443 GALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRER 502
L+G LA+ E E +L + + DA VL V +
Sbjct: 327 VILVG---------LAQNGSEE----EAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSL 373
Query: 503 KLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVRSEE 562
L K ++ K + F + + +Y K +L +S R ++ V
Sbjct: 374 GLGKQLHSLVIKRKFSGNTFVNNG-----LINMYSKCGDLTDSQTVFRRMPKRNYVSWNS 428
Query: 563 LL-----NGNGVHSERLAIAFALLSTRPGTEITIMKNLRVC 598
++ +G+G+ + +L L +P T++T + L C
Sbjct: 429 MIAAFARHGHGLAALKLYEEMTTLEVKP-TDVTFLSLLHAC 468
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 263/509 (51%), Gaps = 21/509 (4%)
Query: 15 PGSGEPKR----HPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXX 70
PG E +R V +W + +++ +AL ++ M+
Sbjct: 111 PGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAV 170
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-- 128
K+C+ L G H VI G + + + S+L +Y P ARRVFDE +P
Sbjct: 171 KACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE---MPEP 227
Query: 129 --ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
I + A++S +S N ++ +A+ LF M R G F +V ++ C L
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV-----LTACGNLRRLK 282
Query: 187 TGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
G +HG +T G+ +++ V +S L MY KCG V ARQ+F+ M ++ +SW+A++ GY
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF 306
QNG + +E++ EM+ D VL +CA L A +G E+ + + G N
Sbjct: 343 QNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 307 LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
+ +ALI++Y + G + A V+ M +++++W A AV F++MV+ G
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
++PD F+ +L+AC H G+ D+G +YF M + YG++PG EHYSC++DLLGRAG +EA
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVE-LAELAFEHVIELEPTNIGYYVLLSNIYSD 485
+L++ + + D ++WG LLG C + + +AE + ++ELEP YVLLSN+Y
Sbjct: 519 ENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKA 578
Query: 486 AKNSEGVLRVRVMMRERKLRKDPGCSYVE 514
L +R +M R + K G S+++
Sbjct: 579 IGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 212/453 (46%), Gaps = 19/453 (4%)
Query: 34 RLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTG 93
R++EL K Q EA+ + S ++C + + G Q HAHV+++G
Sbjct: 32 RILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSG 91
Query: 94 SQPDPYTRSSLISMYSKCSLPFL--ARRVFDETH-NLPISYNAMISGYSLNSMFADAVSL 150
+ D +SL+S+Y K P + RRVFD IS+ +M+SGY A+ +
Sbjct: 92 LETDRNVGNSLLSLYFKLG-PGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEV 150
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
F M + + N T+ V C+ + G C HG +T G + + + ++
Sbjct: 151 FVEM------VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTL 204
Query: 211 LTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPD 269
+Y E AR++FDEM D+I W A++S +++N L L++ M + + + PD
Sbjct: 205 AYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPD 264
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
T VL++C NL G E+ K+ G GSN + ++L++MY +CG++ AR VF+
Sbjct: 265 GSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN 324
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
GM K+ VSW+A A+E+F EM D F TVL AC+
Sbjct: 325 GMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRL 380
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
G + R+ G S L+DL G++G + A + M ++ + W A+L A
Sbjct: 381 GKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSAL 438
Query: 450 KIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
+ E A F +++ ++P I + +L+
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILT 471
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 282/521 (54%), Gaps = 25/521 (4%)
Query: 30 AWNLRLMELSKQRQYK-EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN L LS++ + EA+ ++R M+R +C + Q+H
Sbjct: 242 SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADA 147
I+ G + + L+S YSKC + + VF + + +S+ MIS S DA
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDA 356
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
VS+F MR DG N VT +GL++ + G +HG + G ++ +V
Sbjct: 357 VSIFLNMRF-DGVYP-----NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
NSF+T+Y K +E A++ F+++ R++ISWNAM+SG+AQNG + L+++ M
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM- 469
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERK----IEQCGFGSNPFLTNALINMYARCGNLAR 323
P+ T +VL++ A A+ + V+ ++ + + G S P +++AL++MYA+ GN+
Sbjct: 470 PNEYTFGSVLNAIAF--AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
+ VF+ M K+ WT+ + LF +M++ V PD F++VL+AC+
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
G+ DKG F+ M Y L+P EHYSC+VD+LGRAGRLKEA +L+ + P ++
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 444 ALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERK 503
++LG+C++H NV++ E +E++P G YV + NIY++ + + +R MR++
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 504 LRKDPGCSYVEY---KGKVHV--FYSGDRNHPQMKEIYRKV 539
+ K+ G S+++ +G + + F SGD++HP+ EIYR V
Sbjct: 708 VSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMV 748
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 26/306 (8%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G Q+H +G ++++ MY K A +F+ + + S+N ++SG+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N + A++ RM+ + F++ T +S C G L V GL
Sbjct: 155 NQI---ALNFVVRMK------SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 205
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG-HAARVLELYH 259
++DL V NSF+TMY + G AR++FDEM +D+ISWN+++SG +Q G + ++
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 260 EMKLRRMSPDPVTLLAVLSSCAN-----LGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+M + D V+ +V+++C + L Q+ G+ ++R G+ S + N L++
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR-----GYESLLEVGNILMSR 320
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
Y++CG L ++VF M +++VVSWT AV +F M GV P+ F
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTT-----MISSNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 375 VTVLSA 380
V +++A
Sbjct: 376 VGLINA 381
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 264/521 (50%), Gaps = 25/521 (4%)
Query: 40 KQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDP 98
+ RQY ++ +LYR + + + KSC++ G QLH+ + R G D
Sbjct: 54 ETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADM 113
Query: 99 YTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRRE 157
Y + ++ MY+K AR FDE H +S+ A+ISGY A LF +M
Sbjct: 114 YVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV 173
Query: 158 DGSSTVKFNFNSVTMLGLV-SGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVK 216
V +N M G V SG H +T+ + + Y
Sbjct: 174 --KDVVIYN---AMMDGFVKSGDMTSARRLFDEMTHKTVITW---------TTMIHGYCN 219
Query: 217 CGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK-LRRMSPDPVTLLA 275
+++ AR+LFD M R+L+SWN M+ GY QN + L+ EM+ + PD VT+L+
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
VL + ++ GA +G +++ + A+++MY++CG + +A+ +FD M +K
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
V SW A A++LF M+ +PD + V++AC+H GL ++G +F
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNV 455
M R+ GL EHY C+VDLLGRAG LKEA DLI +M +P+G + + L AC +K++
Sbjct: 399 VM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDI 457
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEY 515
E AE + +ELEP N G YVLL N+Y+ K + V+ +MR+ + +K+ GCS +E
Sbjct: 458 ERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Query: 516 KGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKY 556
V F SGD HP + I+ + +L +H +EKY
Sbjct: 518 NYIVSEFISGDTTHPHRRSIHLVLGDL-----LMHMNEEKY 553
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 175/399 (43%), Gaps = 26/399 (6%)
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISY--NAMISGYSLNSMFA 145
H I T Q +T+ +IS S + + AR++FD+ S+ N+MI Y +
Sbjct: 4 HAIETNVQI--FTKFLVISA-SAVGIGY-ARKLFDQRPQRDDSFLSNSMIKAYLETRQYP 59
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
D+ +L+R +R+E + F F ++T C+L + G LH FG AD+
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLT-----KSCSLSMCVYQGLQLHSQIWRFGFCADMY 114
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
V + MY K G++ AR FDEM R +SW A++SGY + G +L+ +M +
Sbjct: 115 VSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK 174
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
D V A++ G R++ +I+ Y ++ AR
Sbjct: 175 ---DVVIYNAMMDGFVKSGDMTSA----RRLFDEMTHKTVITWTTMIHGYCNIKDIDAAR 227
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM-VRSGVRPDRTVFVTVLSACSHA 384
+FD M ++++VSW + LF EM + + PD ++VL A S
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 385 GLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
G G H F ++RK L + + ++D+ + G +++A + M K A W
Sbjct: 288 GALSLGEWCHCF--VQRK-KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK-QVASW 343
Query: 443 GALLGACKIHKNVELA-ELAFEHVIELEPTNIGYYVLLS 480
A++ ++ N A +L +IE +P I +++
Sbjct: 344 NAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVIT 382
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 263/531 (49%), Gaps = 16/531 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P + +N ++ S+ + E L LY M+ K+C + G
Sbjct: 77 PQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
+ + G + D + SS++++Y KC A +F + I + M++G++
Sbjct: 137 AVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAG 196
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
AV +R M+ E F + V MLGL+ G +HG GL
Sbjct: 197 KSLKAVEFYREMQNEG------FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM 250
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
++ V S + MY K G +E+A ++F M+ + +SW +++SG+AQNG A + E EM+
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL----TNALINMYARC 318
PD VTL+ VL +C+ +G+ G ++ C L AL++MY++C
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTG-----RLVHCYILKRHVLDRVTATALMDMYSKC 365
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G L+ +R +F+ + K +V W V LF +M S + PD F ++L
Sbjct: 366 GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
SA SH+GL ++G H+F M KY +QP +HY CL+DLL RAGR++EA+D+I S K+
Sbjct: 426 SALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNA 485
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
+W ALL C H+N+ + ++A +++L P +IG L+SN ++ A + V +VR +
Sbjct: 486 LPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKL 545
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI 549
MR + K PG S +E G++ F D +H + + + + L+ + ++
Sbjct: 546 MRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 127/286 (44%), Gaps = 15/286 (5%)
Query: 185 LPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSG 244
+ TG L+G +++ L A + GE+ AR++FDE+ R + +N+M+
Sbjct: 41 ISTGNLLNGSSISRDLIASCG----------RIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
Y++ + VL LY +M ++ PD T + +C + G V K G+ ++
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
F+ ++++N+Y +CG + A +F M + V+ WT AVE + EM
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
G DR V + +L A G T G + R GL + LVD+ + G ++
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIE 269
Query: 425 EAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
A + M K WG+L+ LA AFE V+E++
Sbjct: 270 VASRVFSRMMFKT-AVSWGSLISG---FAQNGLANKAFEAVVEMQS 311
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 269/533 (50%), Gaps = 73/533 (13%)
Query: 45 KEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSL 104
+EAL L++ + S+ K+CA L G Q+HA ++ G + D SSL
Sbjct: 172 EEALRLFKELNFSADAITLTTVL---KACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 105 ISMYSKC-------------------SLPFL------------ARRVFDETHN-LPISYN 132
+++Y+KC SL L +R +FD N I +N
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 133 AMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLH 192
+MISGY N+M +A+ LF MR E +S T+ +++ C L TG +H
Sbjct: 289 SMISGYIANNMKMEALVLFNEMRNETRE-------DSRTLAAVINACIGLGFLETGKQMH 341
Query: 193 GCAVTFGLDADLAVMNSFLTMYVKCGE-------------------------------VE 221
A FGL D+ V ++ L MY KCG ++
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 222 LARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCA 281
A+++F+ + + LISWN+M +G++QNG LE +H+M + D V+L +V+S+CA
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 282 NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTA 341
++ + +G +V + G S+ ++++LI++Y +CG + R VFD MV V W +
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 342 XXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
A++LF +M +G+RP + F+ VL+AC++ GL ++G F+ M+ +
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
G P EH+SC+VDLL RAG ++EA++L++ M DG++W ++L C + + + A
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 462 FEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVE 514
E +IELEP N YV LS I++ + + E VR +MRE + K+PG S+ +
Sbjct: 642 AEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 51/348 (14%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + EAL L+ M R+ +C L TG Q+H H
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFL-------------------------------ARR 119
+ G D S+L+ MYSKC P A+R
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 120 VFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSG 178
VF+ N IS+N+M +G+S N + + F +M + D + + V++ ++S
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT------DEVSLSSVISA 459
Query: 179 CNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISW 238
C + L G + A GLD+D V +S + +Y KCG VE R++FD M+ D + W
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPW 519
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
N+M+SGYA NG ++L+ +M + + P +T + VL++C G VE RK+ +
Sbjct: 520 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGL----VEEGRKLFE 575
Query: 299 C-----GFGSNPFLTNALINMYARCGNLARARAVFDGM---VDKSVVS 338
GF + + ++++ AR G + A + + M VD S+ S
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWS 623
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 188/451 (41%), Gaps = 77/451 (17%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRR 153
+ D Y+ + ++S ++K +ARR+F+ ++ N+++ GY LN +A+ LF+
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTM 213
+ F+ +++T+ ++ C L G +H + G++ D + +S + +
Sbjct: 181 L---------NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 214 YVKCGEVELA-------------------------------RQLFDEMLVRDLISWNAMV 242
Y KCG++ +A R LFD R +I WN+M+
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 243 SGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE--------- 293
SGY N L L++EM+ D TL AV+++C LG G ++
Sbjct: 292 SGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLI 350
Query: 294 -----------------RKIEQCGFGS-----NPFLTNALINMYARCGNLARARAVFDGM 331
+E C S + L N++I +Y CG + A+ VF+ +
Sbjct: 351 DDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
Query: 332 VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
+KS++SW + +E F +M + + D +V+SAC+ + G
Sbjct: 411 ENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGE 470
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL-GACK 450
F GL S L+DL + G ++ + +M VK D W +++ G
Sbjct: 471 QVFAR-ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYAT 528
Query: 451 IHKNVELAELAFE-HVIELEPTNIGYYVLLS 480
+ E +L + V + PT I + V+L+
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLT 559
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 150/365 (41%), Gaps = 86/365 (23%)
Query: 104 LISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSST 162
L+ MYS+ +AR +FDE + S+N MI GY + ++ F M DG
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDG--- 124
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
+++N V VSG + K GE+ +
Sbjct: 125 --YSWNVV-----VSG-----------------------------------FAKAGELSV 142
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN 282
AR+LF+ M +D+++ N+++ GY NG+A L L+ E+ S D +TL VL +CA
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF---SADAITLTTVLKACAE 199
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARA------------------ 324
L A G ++ +I G + + ++L+N+YA+CG+L A
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 325 -------------RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
R +FD ++ V+ W + A+ LF+EM R+ R D
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDS 318
Query: 372 TVFVTVLSACSHAGL--TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
V++AC G T K +H K+GL S L+D+ + G EA L
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCH---ACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 430 IKSMK 434
++
Sbjct: 376 FSEVE 380
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 9/226 (3%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+WN S+ E L + M + +CA +S G Q+ A
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA 476
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAV 148
G D SSLI +Y KC RRVFD + + +N+MISGY+ N +A+
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAI 536
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL-HGCAVTFGLDADLAVM 207
LF++M S +T + +++ CN + G L V G D
Sbjct: 537 DLFKKM------SVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHF 590
Query: 208 NSFLTMYVKCGEVELARQLFDEM-LVRDLISWNAMVSGYAQNGHAA 252
+ + + + G VE A L +EM D W++++ G NG+ A
Sbjct: 591 SCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKA 636
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 248/476 (52%), Gaps = 52/476 (10%)
Query: 45 KEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSL 104
++ +SLY M + K+C+ L GF H V+R G + Y +++L
Sbjct: 94 EKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNAL 153
Query: 105 ISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
I ++ C +A +FD++ +++++M SGY+ +A+ LF M +D V
Sbjct: 154 ILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD---QV 210
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
+N +++GC +KC E++ A
Sbjct: 211 AWNV-------MITGC-----------------------------------LKCKEMDSA 228
Query: 224 RQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANL 283
R+LFD +D+++WNAM+SGY G+ L ++ EM+ PD VT+L++LS+CA L
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 288
Query: 284 GAQVVGVEVERKI-EQCGFGSNPF----LTNALINMYARCGNLARARAVFDGMVDKSVVS 338
G G + I E S+ + + NALI+MYA+CG++ RA VF G+ D+ + +
Sbjct: 289 GDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLST 348
Query: 339 WTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEME 398
W ++E+F+EM R V P+ F+ V+ ACSH+G D+G YF M
Sbjct: 349 WNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMR 407
Query: 399 RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELA 458
Y ++P +HY C+VD+LGRAG+L+EA ++SMK++P+ VW LLGACKI+ NVEL
Sbjct: 408 DMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELG 467
Query: 459 ELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVE 514
+ A E ++ + G YVLLSNIY+ +GV +VR M + +++K G S +E
Sbjct: 468 KYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 16/293 (5%)
Query: 191 LHGCAVTFGLDADLAVMNSFL---TMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
+H V GL ++L+V+ + ++ V G ++ A +LFDE+ D+ N ++ G AQ
Sbjct: 31 IHASMVVNGLMSNLSVVGELIYSASLSVP-GALKYAHKLFDEIPKPDVSICNHVLRGSAQ 89
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
+ + + LY EM+ R +SPD T VL +C+ L + G K+ + GF N ++
Sbjct: 90 SMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYV 149
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
NALI +A CG+L A +FD V+W++ A+ LFDEM
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK-- 207
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
D+ + +++ C D FD K + ++ ++ G KEA+
Sbjct: 208 --DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMISGYVNCGYPKEAL 260
Query: 428 DLIKSMK---VKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYV 477
+ K M+ PD +LL AC + ++E + +++E + YV
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 249/466 (53%), Gaps = 47/466 (10%)
Query: 111 CSLPFLARRVFDETHNLPIS--YNAMISGYS--LNSMFADAVSLFRRMRREDGSSTVKFN 166
C+L + AR +FD + P + Y A+++ YS L + A S FR M F
Sbjct: 71 CNLSY-ARFIFDR-FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHF- 127
Query: 167 FNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVK-CGEVELARQ 225
+ L L S L + T +H G + V + L Y + LARQ
Sbjct: 128 ---IYPLVLKSTPYLSSAFST-PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK----------------------- 262
LFDEM R+++SW AM+SGYA++G + + L+ +M
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 263 ---LRRM------SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
RRM P+ VT++ VLS+CA G + + + S+ F++N+L++
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 314 MYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR---SGVRPD 370
+Y +CGNL A +VF KS+ +W + A+ +F+EM++ + ++PD
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
F+ +L+AC+H GL KG YFD M ++G++P EHY CL+DLLGRAGR EA++++
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSE 490
+MK+K D A+WG+LL ACKIH +++LAE+A ++++ L P N GY +++N+Y + N E
Sbjct: 424 STMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWE 483
Query: 491 GVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
R R M++ + K PG S +E +VH FYS D++HP+ +EIY
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIY 529
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 17/236 (7%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLPLTG 82
P +WN L ++ + EA+SL+R M+ S +CA
Sbjct: 220 PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLN 141
+HA R D + +SL+ +Y KC A VF ++ +N+MI+ ++L+
Sbjct: 280 KGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALH 339
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNS-----VTMLGLVSGCNLPNHLPTGTCLHGCAV 196
+A+++F M +K N N +T +GL++ C + G
Sbjct: 340 GRSEEAIAVFEEM--------MKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 197 T-FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGH 250
FG++ + + + + G + A ++ M ++ D W ++++ +GH
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 260/520 (50%), Gaps = 69/520 (13%)
Query: 82 GFQLHAHVIRTG-SQPDPYTRSSLISMYSKCSLPFLARRVFDETH--NLPISYNAMISGY 138
G +H H+ TG +P+ + LI MY KC P A +VFD+ H NL S+N M+SGY
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNL-YSWNNMVSGY 123
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFN----------------------------FNSV 170
+ M A +F M D V +N FN
Sbjct: 124 VKSGMLVRARVVFDSMPERD---VVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
+ GL++ C L HG + G +++ + S + Y KCG++E A++ FDEM
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 231 LVRDL-------------------------------ISWNAMVSGYAQNGHAARVLELYH 259
V+D+ +SW A+++GY + G R L+L+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
+M + P+ T + L + A++ + G E+ + + N + ++LI+MY++ G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 320 NLARARAVFDGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
+L + VF DK V W A+ + D+M++ V+P+RT V +L
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
+ACSH+GL ++GL +F+ M ++G+ P EHY+CL+DLLGRAG KE M I+ M +PD
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
+W A+LG C+IH N EL + A + +I+L+P + Y+LLS+IY+D E V ++R +
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGV 540
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFY--SGDRNHPQMKEIY 536
M++R++ K+ S++E + KV F G H + +EIY
Sbjct: 541 MKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY 580
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 44/332 (13%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +WN ++ ++ EAL Y+ RS +C
Sbjct: 140 PERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET------------------- 124
Q H V+ G + S+I Y+KC A+R FDE
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 125 -------------HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVT 171
P+S+ A+I+GY A+ LFR+M G +F F+S
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM-IALGVKPEQFTFSSC- 317
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLF---D 228
L + ++ + L G +HG + + + V++S + MY K G +E + ++F D
Sbjct: 318 ---LCASASIAS-LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 229 EMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
+ D + WN M+S AQ+G + L + +M R+ P+ TL+ +L++C++ G
Sbjct: 374 DK--HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 289 GVE-VERKIEQCGFGSNPFLTNALINMYARCG 319
G+ E Q G + LI++ R G
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 69/319 (21%)
Query: 20 PKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLP 79
P+++PV +W + +Q AL L+R M+ + A ++
Sbjct: 272 PEKNPV----SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNLPISYNAMIS 136
G ++H ++IRT +P+ SSLI MYSK + RVF D+ H+ + +N MIS
Sbjct: 328 RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC-VFWNTMIS 386
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNF--NSVTMLGLVSGCNLPNHLPTG------ 188
+ + + A+ + M +KF N T++ +++ C+ + G
Sbjct: 387 ALAQHGLGHKALRMLDDM--------IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 189 -TCLHG---------CAVTF-----------------GLDADLAVMNSFLTMYVKCGEVE 221
T HG C + + D + N+ L + G E
Sbjct: 439 MTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEE 498
Query: 222 LARQLFDEMLVRDLIS---WNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLS 278
L ++ DE++ D S + + S YA +G V +L MK RR++ +
Sbjct: 499 LGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKA------- 551
Query: 279 SCANLGAQVVGVEVERKIE 297
V +E+E+K+E
Sbjct: 552 --------VSWIEIEKKVE 562
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 260/486 (53%), Gaps = 16/486 (3%)
Query: 32 NLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIR 91
N+ + S+ ++ +A+ L+ ML+ L+L G Q+H + ++
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLK 478
Query: 92 TGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNA----MISGYSLNSMFADA 147
+G D SSL ++YSKC + ++F +P NA MISG++ +A
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLF---QGIPFKDNACWASMISGFNEYGYLREA 535
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ LF M +DG+S + T+ +++ C+ LP G +HG + G+D + +
Sbjct: 536 IGLFSEML-DDGTSP-----DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
++ + MY KCG ++LARQ++D + D +S ++++SGY+Q+G L+ +M + +
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
D + ++L + A +G +V I + G + P + ++L+ MY++ G++
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
F + +++WTA A+++++ M G +PD+ FV VLSACSH GL
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
++ + + M + YG++P HY C+VD LGR+GRL+EA I +M +KPD VWG LL
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
ACKIH VEL ++A + IELEP++ G Y+ LSNI ++ + V R +M+ ++K+
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 508 PGCSYV 513
PG S V
Sbjct: 890 PGWSSV 895
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 224/511 (43%), Gaps = 52/511 (10%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P +W + L +K AL +++ M S +C S+
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS--YNAMISGYS 139
Q+HA V ++G D ++LISMYSK L+ +VF++ ++ N MI+ +S
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFS 429
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ A+ LF RM +E G T +F+ S +L ++ NL G +HG + G
Sbjct: 430 QSKKPGKAIRLFTRMLQE-GLRTDEFSVCS--LLSVLDCLNL------GKQVHGYTLKSG 480
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L DL V +S T+Y KCG +E + +LF + +D W +M+SG+ + G+ + L+
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
EM SPD TL AVL+ C++ + G E+ + G L +AL+NMY++CG
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+L AR V+D + + VS ++ LF +MV SG D ++L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 380 ACS-----------HAGLTDKGL-----------------HYFDEMERKYGLQPGPE--H 409
A + HA +T GL D+ + + GP+
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA 720
Query: 410 YSCLVDLLGRAGRLKEAM---DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI 466
++ L+ + G+ EA+ +L+K KPD + +L AC VE + ++
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 467 E---LEPTNIGYYVLLSNIYSDAKNSEGVLR 494
+ +EP N Y ++ DA G LR
Sbjct: 781 KDYGIEPENRHYVCMV-----DALGRSGRLR 806
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 189/431 (43%), Gaps = 26/431 (6%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P + N+ + + R ++E+L + M +C+ L PL
Sbjct: 111 PQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE 170
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL-ARRVFDETHNLPI-SYNAMISGYSLN 141
+ H I+ G S+LI ++SK +L F A +VF ++ + + +N +I+G N
Sbjct: 171 LVCCHTIKMGYFFYEVVESALIDVFSK-NLRFEDAYKVFRDSLSANVYCWNTIIAGALRN 229
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNF-NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ LF M V F +S T +++ C L G + + G
Sbjct: 230 QNYGAVFDLFHEM-------CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA 282
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ D+ V + + +Y KCG + A ++F + ++SW M+SGY ++ A LE++ E
Sbjct: 283 E-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE 341
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M+ + + T+ +V+S+C +V + + GF + + ALI+MY++ G+
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 321 LARARAVFDGMVD---KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
+ + VF+ + D +++V+ A+ LF M++ G+R D ++
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 378 LSA--CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
LS C + G K +H + K GL S L L + G L+E+ L + +
Sbjct: 460 LSVLDCLNLG---KQVHGY---TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 436 KPDGAVWGALL 446
K D A W +++
Sbjct: 514 K-DNACWASMI 523
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 9/250 (3%)
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
L D+ + S L+ Y G + A +LFD + D++S N M+SGY Q+ L +
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
+M + ++ +V+S+C+ L A + V + G+ + +ALI+++++
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
A VF + +V W +LF EM +PD + +VL+
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEH-YSC--LVDLLGRAGRLKEAMDLIKSMKVK 436
AC+ + + L F ++ + ++ G E + C +VDL + G + EAM++ +
Sbjct: 260 ACA----SLEKLR-FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-N 313
Query: 437 PDGAVWGALL 446
P W +L
Sbjct: 314 PSVVSWTVML 323
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 232/438 (52%), Gaps = 19/438 (4%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSL 140
G QLH +++ G + + +SL+ Y KC L ARRVF+ + + +NA++S Y L
Sbjct: 161 GIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVL 220
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N M +A L + M GS +F + T L+S C + G +H
Sbjct: 221 NGMIDEAFGLLKLM----GSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSY 272
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D+ V + L MY K + AR+ F+ M+VR+++SWNAM+ G+AQNG + L+ +
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
M L + PD +T +VLSSCA A +V+ + + G + N+LI+ Y+R GN
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
L+ A F + + +VSWT+ ++++F+ M++ ++PD+ F+ VLSA
Sbjct: 393 LSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSA 451
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
CSH GL +GL F M Y ++ EHY+CL+DLLGRAG + EA D++ SM +P
Sbjct: 452 CSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTH 511
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
A G C IH+ E + + ++E+EPT Y +LSN Y SEG ++R
Sbjct: 512 ALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYV----SEGHWNQAALLR 567
Query: 501 ERKLR-----KDPGCSYV 513
+R+ R K PGCS++
Sbjct: 568 KRERRNCYNPKTPGCSWL 585
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 185/410 (45%), Gaps = 29/410 (7%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGY- 138
Q H +++ G + ++ L+ Y+K A ++FDE +P +++N +I G
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDE---MPLRNIVTWNILIHGVI 113
Query: 139 ----SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
N R+ D S + V+ +GL+ C ++ G LH
Sbjct: 114 QRDGDTNHRAHLGFCYLSRILFTDVS------LDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 195 AVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARV 254
V GL++ S + Y KCG + AR++F+ +L RDL+ WNA+VS Y NG
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 255 LELYHEM--KLRRMSPDPVTLLAVLSSC-ANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
L M R D T ++LS+C G Q+ + + + + + + AL
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAI-----LFKVSYQFDIPVATAL 282
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
+NMYA+ +L+ AR F+ MV ++VVSW A A+ LF +M+ ++PD
Sbjct: 283 LNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
F +VLS+C+ + + M K G + L+ R G L EA+
Sbjct: 343 LTFASVLSSCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFH 401
Query: 432 SMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE-LEPTNIGYYVLLS 480
S++ +PD W +++GA H E + FE +++ L+P I + +LS
Sbjct: 402 SIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLS 450
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 15/308 (4%)
Query: 183 NHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMV 242
+HL HG V G+ L + N L Y K E + A +LFDEM +R++++WN ++
Sbjct: 50 DHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI 109
Query: 243 SGYAQ----NGHAARVLELY-HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE 297
G Q H A + Y + +S D V+ + ++ C + G+++ +
Sbjct: 110 HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 298 QCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVE 357
+ G S+ F + +L++ Y +CG + AR VF+ ++D+ +V W A A
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 358 LFDEM--VRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
L M ++ R D F ++LSAC K +H + K Q + L++
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACRIE--QGKQIH---AILFKVSYQFDIPVATALLN 284
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALL-GACKIHKNVELAELAFEHVIE-LEPTNI 473
+ ++ L +A + +SM V+ + W A++ G + + E L + ++E L+P +
Sbjct: 285 MYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 474 GYYVLLSN 481
+ +LS+
Sbjct: 344 TFASVLSS 351
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 248/479 (51%), Gaps = 30/479 (6%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPI 129
K+C+ L G Q+H + +TG D + ++ LI +Y KC L+R++FD +
Sbjct: 129 KACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV 188
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRRE------------------DGSSTVKFNFNSVT 171
SYN+MI GY + A LF M E DG F +
Sbjct: 189 SYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMP 248
Query: 172 MLGLVSGCNLPNHLPTGTCLHG-CAVTFGL-----DADLAVMNSFLTMYVKCGEVELARQ 225
L+S N + G HG GL D+ + + Y K G V A+
Sbjct: 249 EKDLISW----NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLG 284
LFD+M RD++++N+M++GY QN + LE++ +M K + PD TL+ VL + A LG
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
+++ I + F L ALI+MY++CG++ A VF+G+ +KS+ W A
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A ++ ++ R ++PD FV VL+ACSH+GL +GL F+ M RK+ ++
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH 464
P +HY C+VD+L R+G ++ A +LI+ M V+P+ +W L AC HK E EL +H
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 465 VIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFY 523
+I N YVLLSN+Y+ + V RVR MM+ERK+ K PGCS++E G+VH F+
Sbjct: 545 LILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 603
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 203/472 (43%), Gaps = 67/472 (14%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLA---RRVFDETH---------NLPISY 131
Q+H +I+TG + + ++ ++ P+LA R VF E H P +
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 132 NAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL 191
NA+I +S A+ L + E+G S KF+ + V + C+ + G +
Sbjct: 90 NAVIKSHSHGKDPRQALLL-LCLMLENGVSVDKFSLSLV-----LKACSRLGFVKGGMQI 143
Query: 192 HGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
HG GL +DL + N + +Y+KCG + L+RQ+FD M RD +S+N+M+ GY + G
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
EL+ M + + L++ S + GV++ K+ + N++
Sbjct: 204 VSARELFDLMPMEMKN-----LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSM 258
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM--------- 362
I+ Y + G + A+ +FD M + VV+W A LFD+M
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYN 318
Query: 363 -----------------------VRSGVRPDRTVFVTVLSACSHAGLTDKGLH-YFDEME 398
S + PD T V VL A + G K + + +E
Sbjct: 319 SMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE 378
Query: 399 RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELA 458
+++ L G + L+D+ + G ++ AM + + ++ K W A++G IH L
Sbjct: 379 KQFYL--GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH-WNAMIGGLAIHG---LG 432
Query: 459 ELAFEHVIELE-----PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
E AF+ ++++E P +I + +L+ EG+L +M R+ K+
Sbjct: 433 ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 250/476 (52%), Gaps = 14/476 (2%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T +WN + S+ +EA++++++M + +LS ++ LH
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN------LLSAHVSHEPLHC 270
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFAD 146
V++ G D +SL+ YS+C A R++ + + +++S Y+
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDI 330
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
AV F + R+ + ++V ++G++ GC +H+ G LHG A+ GL V
Sbjct: 331 AVVYFSKTRQ------LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLV 384
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR- 265
+N +TMY K +VE LF+++ LISWN+++SG Q+G A+ E++H+M L
Sbjct: 385 VNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGG 444
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ PD +T+ ++L+ C+ L +G E+ + F + F+ ALI+MYA+CGN +A
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
+VF + +W + A+ + EM G++PD F+ VLSAC+H G
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG 564
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
D+G F M +++G+ P +HY+ +V LLGRA EA+ LI M +KPD AVWGAL
Sbjct: 565 FVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGAL 624
Query: 446 LGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
L AC IH+ +E+ E + L+ N G YVL+SN+Y+ + V+RVR MM++
Sbjct: 625 LSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 180/405 (44%), Gaps = 17/405 (4%)
Query: 48 LSLYRHMLRSSXX--XXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
++++R +LRSS + + S L Q+ H+ ++G Y ++SL+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 106 SMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
++Y K A+ +FDE + +NA+I GYS N DA LF M ++
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG------ 146
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
F+ ++ T++ L+ C + G +HG A GL+ D V N+ ++ Y KC E+ A
Sbjct: 147 FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAE 206
Query: 225 QLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
LF EM + +SWN M+ Y+Q+G + ++ M + + PVT++ +LS
Sbjct: 207 VLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS------ 260
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
A V + + +CG ++ + +L+ Y+RCG L A ++ S+V T+
Sbjct: 261 AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
AV F + + ++ D V +L C + D G+ K GL
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS-LHGYAIKSGLC 379
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
+ L+ + + ++ + L + ++ P + W +++ C
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-WNSVISGC 423
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 209/488 (42%), Gaps = 30/488 (6%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P T WN + S+ +A L+ ML+ C G
Sbjct: 112 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 171
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
+H ++G + D +++LIS YSKC+ A +F E + +S+N MI YS +
Sbjct: 172 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ +A+++F+ M ++ + VT++ L+S +H P LH V G+
Sbjct: 232 LQEEAITVFKNMFEKN------VEISPVTIINLLSA--HVSHEP----LHCLVVKCGMVN 279
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D++V+ S + Y +CG + A +L+ ++ ++VS YA+ G + + + +
Sbjct: 280 DISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR 339
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
M D V L+ +L C +G+ + + G + + N LI MY++ ++
Sbjct: 340 QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVE 399
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS-GVRPDRTVFVTVLSAC 381
+F+ + + ++SW + A E+F +M+ + G+ PD ++L+ C
Sbjct: 400 TVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 459
Query: 382 SHAGLTDKG--LHYFDEMERKYGLQPG--PEHYSC--LVDLLGRAGRLKEAMDLIKSMKV 435
S + G LH Y L+ E++ C L+D+ + G +A + KS+K
Sbjct: 460 SQLCCLNLGKELH-------GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKA 512
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVL 493
P A W +++ + A + + E L+P I + +LS EG +
Sbjct: 513 -PCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKI 571
Query: 494 RVRVMMRE 501
R M++E
Sbjct: 572 CFRAMIKE 579
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 214/385 (55%), Gaps = 11/385 (2%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
L+ C G +H G + + L +Y G+++ A LF + +RD
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANL-----GAQVVG 289
LI WNAM+SGY Q G L +Y++M+ R+ PD T +V +C+ L G +
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 290 VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
V ++R I+ SN + +AL++MY +C + + VFD + ++V++WT+
Sbjct: 234 VMIKRCIK-----SNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
++ F++M G RP+ F+ VL+AC+H GL DKG +F M+R YG++P +H
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQH 348
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELE 469
Y+ +VD LGRAGRL+EA + + K VWG+LLGAC+IH NV+L ELA +EL+
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELD 408
Query: 470 PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNH 529
PTN G YV+ +N Y+ E +VR M ++KDPG S +E +G+VH F D +H
Sbjct: 409 PTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSH 468
Query: 530 PQMKEIYRKVAELENSVMEI-HRPD 553
++IY+KV E+ + M+I + PD
Sbjct: 469 RLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 20/251 (7%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYS------KCSLPFLARRVFDETHNLPISYNAMI 135
G ++HA + G + Y + L+ +Y+ + F + ++ D I +NAMI
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD-----LIPWNAMI 181
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
SGY + + + ++ MR+ + + T + C+ + L G H
Sbjct: 182 SGYVQKGLEQEGLFIYYDMRQN------RIVPDQYTFASVFRACSALDRLEHGKRAHAVM 235
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
+ + +++ V ++ + MY KC ++FD++ R++I+W +++SGY +G + VL
Sbjct: 236 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVL 295
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALIN 313
+ + +MK P+PVT L VL++C + G G E +++ +G P + A+++
Sbjct: 296 KCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKR-DYGIEPEGQHYAAMVD 354
Query: 314 MYARCGNLARA 324
R G L A
Sbjct: 355 TLGRAGRLQEA 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + ++ +E L +Y M ++ ++C+ L G + HA +I
Sbjct: 177 WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 236
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLNSMFADAV 148
+ + + S+L+ MY KCS RVFD+ T N+ I++ ++ISGY + ++ +
Sbjct: 237 KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV-ITWTSLISGYGYHGKVSEVL 295
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTFGLDADLAVM 207
F +M+ E N VT L +++ CN + G + +G++ +
Sbjct: 296 KCFEKMKEEGCRP------NPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLIS-WNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+ + + G ++ A + + ++ W +++ +G+ ++LEL L
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN-VKLLELAATKFLELD 408
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ + + A+ G + +V RK+E G +P
Sbjct: 409 PTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDP 447
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 4/217 (1%)
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ +P T +L C G + ++ GF N +L L+ +YA G+L A
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
+F + + ++ W A + ++ +M ++ + PD+ F +V ACS
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
+ G M ++ ++ S LVD+ + + + + + + W +L
Sbjct: 224 RLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSL 281
Query: 446 LGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
+ H V FE + E P + + V+L+
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 237/419 (56%), Gaps = 5/419 (1%)
Query: 121 FDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK---FNFNSVTMLGLVS 177
F +T + A+ + L+ S+ + ED SS+VK ++F++ + V
Sbjct: 69 FRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVR 128
Query: 178 GCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS 237
C L TG+ H A+ G +D+ + +S + +Y GEVE A ++F+EM R+++S
Sbjct: 129 SCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVS 188
Query: 238 WNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE 297
W AM+SG+AQ L+LY +M+ P+ T A+LS+C GA G V +
Sbjct: 189 WTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTL 248
Query: 298 QCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVE 357
G S ++N+LI+MY +CG+L A +FD +K VVSW + A+E
Sbjct: 249 HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIE 308
Query: 358 LFDEMV-RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDL 416
LF+ M+ +SG +PD ++ VLS+C HAGL +G +F+ M ++GL+P HYSCLVDL
Sbjct: 309 LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDL 367
Query: 417 LGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYY 476
LGR G L+EA++LI++M +KP+ +WG+LL +C++H +V A E + LEP +
Sbjct: 368 LGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATH 427
Query: 477 VLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI 535
V L+N+Y+ + VR +M+++ L+ +PGCS++E V +F + D ++ +M EI
Sbjct: 428 VQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEI 486
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPI 129
+SC + TG H ++ G D Y SSL+ +Y A +VF+E +
Sbjct: 128 RSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVV 187
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+ AMISG++ + L+ +MR+ N T L+S C L G
Sbjct: 188 SWTAMISGFAQEWRVDICLKLYSKMRKSTSDP------NDYTFTALLSACTGSGALGQGR 241
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
+H + GL + L + NS ++MY KCG+++ A ++FD+ +D++SWN+M++GYAQ+G
Sbjct: 242 SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 250 HAARVLELYHEMKLRR-MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
A + +EL+ M + PD +T L VLSSC + G G + + + G
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 309 NALINMYARCGNLARARAVFDGM 331
+ L+++ R G L A + + M
Sbjct: 362 SCLVDLLGRFGLLQEALELIENM 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 125/295 (42%), Gaps = 10/295 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W + +++ + L LY M +S+ +C G
Sbjct: 182 PERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGR 241
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
+H + G + + +SLISMY KC A R+FD+ N +S+N+MI+GY+ +
Sbjct: 242 SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ A+ LF M + G+ +++T LG++S C + G GL
Sbjct: 302 LAMQAIELFELMMPKSGTKP-----DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEM 261
+L + + + + G ++ A +L + M ++ + + W +++ +G + E
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEER 416
Query: 262 KLRRMSPD-PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+ + PD T + + + A++G V + ++ G +NP + IN Y
Sbjct: 417 LM--LEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNY 469
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 256/472 (54%), Gaps = 35/472 (7%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLP------FLARRVFDETHNLPISYNAMI 135
G Q H V + + +SL+ MYS+C FL+ R D +S+N MI
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD-----VVSWNTMI 391
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
S + N + + + L M+++ F + +T+ L+S + + G H
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQG------FKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 196 VTFGLDADLAVMNSFLT-MYVKCGEVELARQLFDE--MLVRDLISWNAMVSGYAQNGHAA 252
+ G+ MNS+L MY K G + ++++LF+ RD +WN+M+SGY QNGH
Sbjct: 446 IRQGIQ--FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Query: 253 RVLELYHEMKLRRMSPDPVTLLAVLSSCA-----NLGAQVVGVEVERKIEQCGFGSNPFL 307
+ ++ +M + + P+ VT+ ++L +C+ +LG Q+ G + + ++Q N F+
Sbjct: 504 KTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ-----NVFV 558
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
+AL++MY++ G + A +F +++ V++T A+ LF M SG+
Sbjct: 559 ASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
+PD FV VLSACS++GL D+GL F+EM Y +QP EHY C+ D+LGR GR+ EA
Sbjct: 619 KPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAY 678
Query: 428 DLIKSMKVKPDGA-VWGALLGACKIHKNVELAELAFEHVIELEPTN--IGYYVLLSNIYS 484
+ +K + + + A +WG+LLG+CK+H +ELAE E + + + GY VLLSN+Y+
Sbjct: 679 EFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYA 738
Query: 485 DAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
+ + + V +VR MRE+ L+K+ G S +E G V+ F S D+ HP EIY
Sbjct: 739 EEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 189/416 (45%), Gaps = 26/416 (6%)
Query: 97 DPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLNSMFADAVSLFRRM 154
D + SS ISMY++ +RRVFD N+ + +N MI Y N +++ LF
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV-WNTMIGVYVQNDCLVESIELFL-- 306
Query: 155 RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMY 214
+ + + + VT L S + + G HG + + ++NS + MY
Sbjct: 307 ---EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMY 363
Query: 215 VKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLL 274
+CG V + +F M RD++SWN M+S + QNG L L +EM+ + D +T+
Sbjct: 364 SRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVT 423
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGF---GSNPFLTNALINMYARCGNLARARAVFD-- 329
A+LS+ +NL + +G + + + G G N + LI+MY++ G + ++ +F+
Sbjct: 424 ALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQKLFEGS 479
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
G ++ +W + +F +M+ +RP+ ++L ACS G D
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL 539
Query: 390 G--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
G LH F R+Y L S LVD+ +AG +K A D+ K + +LG
Sbjct: 540 GKQLHGFS--IRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 448 ACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
+ H E A F + E ++P I + +LS EG L++ MRE
Sbjct: 597 YGQ-HGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG-LKIFEEMRE 650
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 203/464 (43%), Gaps = 35/464 (7%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXX--XXXXXXXXKSCAILSLPLT 81
P T WN ++ EAL Y M +++ K+CA
Sbjct: 66 PKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKA 125
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKC-SLP-----FLARRVFDETHNLP-ISYNAM 134
G +H H+IR +SL++MY C + P + R+VFD +++N +
Sbjct: 126 GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTL 185
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
IS Y A+A F M R ++ + V+ + + ++ + +G
Sbjct: 186 ISWYVKTGRNAEACRQFGIMMR------MEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 195 AVTFGLD--ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAA 252
+ G + DL V++S ++MY + G++E +R++FD + R++ WN M+ Y QN
Sbjct: 240 MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLV 299
Query: 253 RVLELYHE-MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF----- 306
+EL+ E + + + D VT L S+ + L VE+ R+ GF S F
Sbjct: 300 ESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ----VELGRQFH--GFVSKNFRELPI 353
Query: 307 -LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
+ N+L+ MY+RCG++ ++ VF M ++ VVSW + L EM +
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ-PGPEHYSCLVDLLGRAGRLK 424
G + D +LSA S+ + G + R+ G+Q G Y L+D+ ++G ++
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQFEGMNSY--LIDMYSKSGLIR 470
Query: 425 EAMDLIK-SMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
+ L + S + D A W +++ + + E L F ++E
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 38/356 (10%)
Query: 114 PFLARRVFDETHN-LPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKF-NFNSVT 171
P LAR++FD + +N +I G+ N++ +A+ + RM++ T F N ++ T
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKK-----TAPFTNCDAYT 109
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKC------GEVELARQ 225
+ C +L G +H + ++ V NS + MYV C E ++ R+
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA 285
+FD M +++++WN ++S Y + G A + M + P PV+ + V +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA------ 223
Query: 286 QVVGVEVERKIEQCG------------FGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
V + R I++ + + F+ ++ I+MYA G++ +R VFD V+
Sbjct: 224 ----VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLH 392
+++ W ++ELF E + S + D ++ SA S + G
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 393 YFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
+ + + + P S +V + R G + ++ + SM+ + D W ++ A
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRER-DVVSWNTMISA 393
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 105/257 (40%), Gaps = 24/257 (9%)
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+ S L+ + G +LARQLFD + + WN ++ G+ N L Y MK +
Sbjct: 42 IRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK--KT 99
Query: 267 SP----DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+P D T + L +CA G V + +C S+ + N+L+NMY C N
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAP 159
Query: 323 R------ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
R VFD M K+VV+W A F M+R V+P FV
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH------YSCLVDLLGRAGRLKEAMDLI 430
V A S + K ++ M L+ G E+ S + + G ++ + +
Sbjct: 220 VFPAVSISRSIKKANVFYGLM-----LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVF 274
Query: 431 KSMKVKPDGAVWGALLG 447
S V+ + VW ++G
Sbjct: 275 DSC-VERNIEVWNTMIG 290
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 11/174 (6%)
Query: 16 GSGEPKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAI 75
GSG +R WN + ++ ++ ++R ML + +C+
Sbjct: 478 GSGYAERDQ----ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 533
Query: 76 LSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAM 134
+ G QLH IR + + S+L+ MYSK A +F +T ++Y M
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 593
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
I GY + M A+SLF M +E G +++T + ++S C+ + G
Sbjct: 594 ILGYGQHGMGERAISLFLSM-QESG-----IKPDAITFVAVLSACSYSGLIDEG 641
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 244/438 (55%), Gaps = 25/438 (5%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLFR 152
Q ++L+ MY K A VFD E N +S+ AMISG N + V LFR
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKN-EVSWTAMISGCVANQNYEMGVDLFR 240
Query: 153 RMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL----HGCAVTFGLDADLAVMN 208
M+RE+ N VT+L ++ C N+ G+ L HG + G AD +
Sbjct: 241 AMQREN------LRPNRVTLLSVLPACVELNY---GSSLVKEIHGFSFRHGCHADERLTA 291
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+F+TMY +CG V L+R LF+ VRD++ W++M+SGYA+ G + V+ L ++M+ +
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA 351
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+ VTLLA++S+C N V +I +CGF S+ L NALI+MYA+CG+L+ AR VF
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF 411
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
+ +K +VSW++ A+E+F M++ G D F+ +LSAC+HAGL +
Sbjct: 412 YELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVE 471
Query: 389 KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
+ F + KY + EHY+C ++LLGR G++ +A ++ +M +KP +W +LL A
Sbjct: 472 EAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSA 530
Query: 449 CKIHKNVELA-ELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
C+ H +++A ++ +++ EP N YVLLS I++++ N VR +M+ RKL K
Sbjct: 531 CETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKC 590
Query: 508 PGCSYVE-------YKGK 518
G S +E Y+GK
Sbjct: 591 YGFSKIEPELQIEDYQGK 608
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 211/456 (46%), Gaps = 18/456 (3%)
Query: 34 RLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLP-LTGFQLHAHVIR 91
+L L + Y EAL LY+ + S K+CA P L G QLH ++
Sbjct: 16 KLKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 92 TGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSL 150
G+ D +SLISMY+K S + R+VFDE H +SY ++I+ + + +A+ L
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCN-LPNHLPTGTCLHGCA-VTFGLDADLAVMN 208
+ M F S + L++ C + + H V + + +
Sbjct: 136 IKEMY------FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLST 189
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + MY+K + A +FD+M V++ +SW AM+SG N + ++L+ M+ + P
Sbjct: 190 ALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRP 249
Query: 269 DPVTLLAVLSSCA--NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
+ VTLL+VL +C N G+ +V E+ + G ++ LT A + MY RCGN++ +R
Sbjct: 250 NRVTLLSVLPACVELNYGSSLVK-EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRV 308
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+F+ + VV W++ + L ++M + G+ + + ++SAC+++ L
Sbjct: 309 LFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTL 368
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
++ K G + L+D+ + G L A ++ + K D W +++
Sbjct: 369 LSFASTVHSQI-LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMI 426
Query: 447 GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
A +H + A F+ +I+ E ++ + +LS
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILS 462
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 273/540 (50%), Gaps = 48/540 (8%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQP-DPYTRSSL 104
E LY M+R K+ + LS Q+H H+I +G Y +SL
Sbjct: 116 ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLS---EVKQIHCHIIVSGCLSLGNYLWNSL 172
Query: 105 ISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
+ Y + +A +VF H S+N MI GY+ +A+ L+ +M DG
Sbjct: 173 VKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMV-SDGIEPD 231
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG--LDADLAVMNSFLTMYVKC---- 217
++ T+L L+ C + + G +HG G ++L + N+ L MY KC
Sbjct: 232 EY-----TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 218 ---------------------------GEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
G++E A+ +FD+M RDL+SWN+++ GY++ G
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 251 AAR-VLELYHEMKL-RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
R V EL++EM + ++ PD VT+++++S AN G G V + + + FL+
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
+ALI+MY +CG + RA VF +K V WT+ A++LF M GV
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
P+ + VL+ACSH+GL ++GLH F+ M+ K+G P EHY LVDLL RAGR++EA D
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 429 LI-KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
++ K M ++P ++WG++L AC+ +++E AELA +++LEP G YVLLSNIY+
Sbjct: 527 IVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVG 586
Query: 488 NSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR-NHPQMKEIYRKVAELENSV 546
+ R M R ++K G S V +H F + ++ NHP+ EI R + L N +
Sbjct: 587 RWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEM 646
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 151/337 (44%), Gaps = 31/337 (9%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P +++N+ ++ +KQ EAL LY M+ C LS
Sbjct: 191 RMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRL 250
Query: 82 GFQLHAHVIRTGS--QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGY 138
G +H + R G + ++L+ MY KC LA+R FD + S+N M+ G+
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 139 SLNSMFADAVSLFRRMRREDGSS----------------TVKFNF-----------NSVT 171
A ++F +M + D S TV+ F + VT
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
M+ L+SG L G +HG + L D + ++ + MY KCG +E A +F
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
+D+ W +M++G A +G+ + L+L+ M+ ++P+ VTLLAVL++C++ G G+
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 292 VERKI-EQCGFGSNPFLTNALINMYARCGNLARARAV 327
V + ++ GF +L+++ R G + A+ +
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 41/336 (12%)
Query: 151 FRRMRREDGSSTVKFN-FNSVTM----LGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
FR E GS T K++ S+ + L L+ CN N + + F L D
Sbjct: 11 FRLFGTECGSKTTKWDPVQSLQLNHQSLVLLENCNSRNQFKQ---VLAQIMRFNLICDTF 67
Query: 206 VMNS--FLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEMK 262
M+ F + ++LA+ LF ++ +N M+S + + + LY M
Sbjct: 68 PMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMI 125
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
R+SPD T L ++ + + L ++V + + C +L N+L+ Y GN
Sbjct: 126 RHRVSPDRQTFLYLMKASSFL-SEVKQIHCHIIVSGC-LSLGNYLWNSLVKFYMELGNFG 183
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
A VF M V S+ A++L+ +MV G+ PD +++L C
Sbjct: 184 VAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCG 243
Query: 383 HAGLTD----KGLHYFDEMERKYGLQPGPEHYS------CLVDLLGR---AGRLKEAMDL 429
H L+D KG+H + +ER+ GP + S L+D+ + +G K A D
Sbjct: 244 H--LSDIRLGKGVHGW--IERR-----GPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 430 IKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV 465
+K K D W ++ ++E A+ F+ +
Sbjct: 295 MK----KKDMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/492 (33%), Positives = 248/492 (50%), Gaps = 11/492 (2%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+WN + + +AL ++ M+ S C L G +H V
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAV 148
+++L++MY KC AR VFD I++ MI+GY+ + +A+
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
L R M+ E N+VT+ LVS C + G CLHG AV + +D+ +
Sbjct: 305 ELCRLMQFEG------VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
S ++MY KC V+L ++F W+A+++G QN + L L+ M+ + P
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+ TL ++L + A L + + + + GF S+ L+++Y++CG L A +F
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 329 DGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA 384
+G+ +K VV W A A+++F EMVRSGV P+ F + L+ACSH+
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 385 GLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGA 444
GL ++GL F M Y HY+C+VDLLGRAGRL EA +LI ++ +P VWGA
Sbjct: 539 GLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGA 598
Query: 445 LLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
LL AC H+NV+L E+A + ELEP N G YVLL+NIY+ + + +VR MM L
Sbjct: 599 LLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Query: 505 RKDPGCSYVEYK 516
RK PG S +E +
Sbjct: 659 RKKPGHSTIEIR 670
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 152/307 (49%), Gaps = 6/307 (1%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSM 143
LH HVI TG + + S+L Y+ C AR++F+E + +SYN +I Y +
Sbjct: 37 LHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+ DA+S+F RM E VK + T + + G +HG + D
Sbjct: 96 YHDAISVFIRMVSEG----VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRD 151
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
V N+ L MY+ G+VE+AR +FD M RD+ISWN M+SGY +NG+ L ++ M
Sbjct: 152 KYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+ D T++++L C +L +G V + +E+ G + NAL+NMY +CG +
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
AR VFD M + V++WT A+EL M GVRP+ +++S C
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 384 AGLTDKG 390
A + G
Sbjct: 332 ALKVNDG 338
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 214/497 (43%), Gaps = 33/497 (6%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXX--XXKSCAILSLPLT 81
P + ++N+ + ++ Y +A+S++ M+ K+ L
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSL 140
G +H ++R+ D Y +++L++MY +AR VFD N IS+N MISGY
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N DA+ +F M E + + T++ ++ C L G +H L
Sbjct: 196 NGYMNDALMMFDWMVNE------SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ V N+ + MY+KCG ++ AR +FD M RD+I+W M++GY ++G LEL
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 261 MKLRRMSPDPVTLLAVLSSCA-----NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
M+ + P+ VT+ +++S C N G + G V +++ S+ + +LI+MY
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY-----SDIIIETSLISMY 364
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
A+C + VF G W+A A+ LF M R V P+
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 376 TVLSACSHAGLTD----KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
++L A +A L D +H + K G + + LV + + G L+ A +
Sbjct: 425 SLLPA--YAALADLRQAMNIHCY---LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 432 SMKVK---PDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDA 486
++ K D +WGAL+ +H + A F ++ + P I + L+
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG 539
Query: 487 KNSEGVLRVRVMMRERK 503
EG+ R M+ K
Sbjct: 540 LVEEGLTLFRFMLEHYK 556
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%)
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAAR 253
C V G ++++ Y CG + AR+LF+EM L+S+N ++ Y + G
Sbjct: 39 CHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREG---- 94
Query: 254 VLELYHE---MKLRRMS------PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
LYH+ + +R +S PD T V + L + +G+ V +I + FG +
Sbjct: 95 ---LYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRD 151
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
++ NAL+ MY G + AR VFD M ++ V+SW A+ +FD MV
Sbjct: 152 KYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
V D V++L C H + G + +E K L E + LV++ + GR+
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR-LGDKIEVKNALVNMYLKCGRMD 270
Query: 425 EAMDLIKSMKVKPDGAVWGALLGACKIHKNVELA 458
EA + M+ + D W ++ +VE A
Sbjct: 271 EARFVFDRME-RRDVITWTCMINGYTEDGDVENA 303
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 229/436 (52%), Gaps = 9/436 (2%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD-ETHNLPISYNAMISGYSL 140
G +H + R G D ++ ++ +Y+K ARRVFD + ++++AMI GY
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLV-SGCNLPNHLPTGTCLHGCAVTFG 199
N M +A +F +M D + V + +GL+ GC L G C+H AV G
Sbjct: 284 NEMIKEAGEVFFQMLVNDNVAMV-----TPVAIGLILMGCARFGDLSGGRCVHCYAVKAG 338
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
DL V N+ ++ Y K G + A + F E+ ++D+IS+N++++G N L+H
Sbjct: 339 FILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFH 398
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
EM+ + PD TLL VL++C++L A G G+ N + NAL++MY +CG
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
L A+ VFD M + +VSW A+ LF+ M +GV PD + +LS
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 380 ACSHAGLTDKGLHYFDEMER-KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
ACSH+GL D+G F+ M R + + P +HY+C+ DLL RAG L EA D + M +PD
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD 578
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
V G LL AC +KN EL + + L T VLLSN YS A+ E R+R++
Sbjct: 579 IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMI 637
Query: 499 MRERKLRKDPGCSYVE 514
++R L K PG S+V+
Sbjct: 638 QKKRGLLKTPGYSWVD 653
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 199/439 (45%), Gaps = 22/439 (5%)
Query: 23 HP-VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
HP +NP AW+L + + ++AL LY ML S K+CA L
Sbjct: 63 HPRINPI-AWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISG 137
G +H+HV + D Y ++L+ Y+KC +A +VFDE +P +++NAMISG
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE---MPKRDMVAWNAMISG 178
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
+SL+ D + LF MRR DG S N T++G+ L G +HG
Sbjct: 179 FSLHCCLTDVIGLFLDMRRIDGLSP-----NLSTIVGMFPALGRAGALREGKAVHGYCTR 233
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
G DL V L +Y K + AR++FD ++ ++W+AM+ GY +N E+
Sbjct: 234 MGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEV 293
Query: 258 YHEMKLRRMSP--DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+ +M + PV + +L CA G G V + GF + + N +I+ Y
Sbjct: 294 FFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
A+ G+L A F + K V+S+ + + LF EM SG+RPD T +
Sbjct: 354 AKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLL 413
Query: 376 TVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
VL+ACSH G H + + +G + L+D+ + G+L A + +M
Sbjct: 414 GVLTACSHLAALGHGSSCHGYCVV---HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM 470
Query: 434 KVKPDGAVWGALLGACKIH 452
K D W +L IH
Sbjct: 471 H-KRDIVSWNTMLFGFGIH 488
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 82 GFQLHAHVI-RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL---PISYNAMISG 137
G +H H++ R+ + +L +Y+ C+ LAR VFDE + PI+++ MI
Sbjct: 18 GQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRA 77
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
Y+ N A+ L+ +M G K+ + V + C + G +H
Sbjct: 78 YASNDFAEKALDLYYKMLNS-GVRPTKYTYPFV-----LKACAGLRAIDDGKLIHSHVNC 131
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
D+ V + + Y KCGE+E+A ++FDEM RD+++WNAM+SG++ + V+ L
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 258 YHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
+ +M ++ +SP+ T++ + + GA G V + GF ++ + ++++YA
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 317 RCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV 363
+ + AR VFD K+ V+W+A A E+F +M+
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDL--ISWNAMVSGYAQNGHAARVLELYHEMKL 263
V+ + +Y C EVELAR +FDE+ + I+W+ M+ YA N A + L+LY++M
Sbjct: 37 VLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLN 96
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+ P T VL +CA L A G + + F ++ ++ AL++ YA+CG L
Sbjct: 97 SGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEM 156
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR-SGVRPDRTVFVTVLSACS 382
A VFD M + +V+W A + LF +M R G+ P+ + V + A
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALG 216
Query: 383 HAGLTDKG 390
AG +G
Sbjct: 217 RAGALREG 224
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 257/492 (52%), Gaps = 27/492 (5%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+W+ + + Q+ EA+SL+R M+R + CA ++ G +H
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHC 425
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI----SYNAMISGYSLNSM 143
+ I+ + + T +++ISMY+KC A + F+ LPI ++NA+ GY+
Sbjct: 426 YAIKADIESELETATAVISMYAKCGRFSPALKAFER---LPIKDAVAFNALAQGYTQIGD 482
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
A +++ M+ +S TM+G++ C + G+C++G + G D++
Sbjct: 483 ANKAFDVYKNMKLHGVCP------DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEM-LVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
V ++ + M+ KC + A LFD+ + +SWN M++GY +G A + + +MK
Sbjct: 537 CHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMK 596
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
+ + P+ VT + ++ + A L A VG+ V + QCGF S + N+L++MYA+CG +
Sbjct: 597 VEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIE 656
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
+ F + +K +VSW AV LF M + ++PD F++VLSAC
Sbjct: 657 SSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACR 716
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
HAGL ++G F+EM ++ ++ EHY+C+VDLLG+AG EA+++++ M+VK VW
Sbjct: 717 HAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVW 776
Query: 443 GALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRER 502
GALL + ++H N+ L+ A +++LEP N + YS + R+ +
Sbjct: 777 GALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH-------YSQDR------RLGEVNNVS 823
Query: 503 KLRKDPGCSYVE 514
+++K P CS++E
Sbjct: 824 RIKKVPACSWIE 835
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 170/394 (43%), Gaps = 12/394 (3%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSM 143
LH VI+ G S LI MY C+ + A VF+E S+ M++ Y+ N
Sbjct: 223 LHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF 280
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
F + + LF MR D N V + L G +H AV GL D
Sbjct: 281 FEEVLELFDLMRNYD------VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
++V S ++MY KCGE+E+A QLF + RD++SW+AM++ Y Q G + L+ +M
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+ P+ VTL +VL CA + A +G + + S A+I+MYA+CG +
Sbjct: 395 IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSP 454
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
A F+ + K V++ A A +++ M GV PD V +L C+
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAF 514
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
+G + ++ K+G L+++ + L A+ L + W
Sbjct: 515 CSDYARGSCVYGQI-IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWN 573
Query: 444 ALLGACKIHKNVELAELAFEH--VIELEPTNIGY 475
++ +H E A F V + +P + +
Sbjct: 574 IMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTF 607
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 16/419 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAHV 89
WN + ++ ++EAL + +M K+CA G ++H +
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH-NLPISYNAMISGYSLNSMFADAV 148
G + D Y ++L+ MY K AR+VFD+ H +++N M+SG + N + A+
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
LF MR + + + V++ L+ + CLHG + G A +
Sbjct: 187 LLFHDMR------SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSS 238
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ MY C ++ A +F+E+ +D SW M++ YA NG VLEL+ M+ +
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+ V + L + A +G V G+ + Q G + + +L++MY++CG L A +F
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS--HAGL 386
+ D+ VVSW+A A+ LF +M+R ++P+ +VL C+ A
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
K +H + K ++ E + ++ + + GR A+ + + +K D + AL
Sbjct: 419 LGKSIHCY---AIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL 473
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 14/367 (3%)
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLN 141
Q+H +I +G +P + LI+ YS L+R +FD + + +N+MI GY+
Sbjct: 22 LQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ +A+ F M E G K++F + C G +H GL+
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFA-----LKACAGSMDFKKGLRIHDLIAEMGLE 132
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+D+ + + + MY K ++ ARQ+FD+M V+D+++WN MVSG AQNG ++ L L+H+M
Sbjct: 133 SDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM 192
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ + D V+L ++ + + L V + + + GF ++ LI+MY C +L
Sbjct: 193 RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADL 250
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
A +VF+ + K SW +ELFD M VR ++ + L A
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAA 310
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV 441
++ G KG+ D ++ GL + L+ + + G L+ A L +++ + D
Sbjct: 311 AYVGDLVKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR-DVVS 368
Query: 442 WGALLGA 448
W A++ +
Sbjct: 369 WSAMIAS 375
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 232/446 (52%), Gaps = 25/446 (5%)
Query: 117 ARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNF---NSVTM 172
A +VF E + + +MI+GY LN D VS R V +N + M
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNK---DLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV 232
++ +L + +P D+ N+ L Y G++E ++FD+M
Sbjct: 104 GNMLEARSLFDQMPC--------------RDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 233 RDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
R++ SWN ++ GYAQNG + VL + M + P+ T+ VLS+CA LGA G
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 292 VERKIEQCGFGS-NPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
V + E G+ + + NALI+MY +CG + A VF G+ + ++SW
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+ LF EM SG+ PD+ FV VL AC H GL + GL YF+ M + + P EH
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC 329
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
C+VDLL RAG L +A++ I M VK D +W LLGA K++K V++ E+A E +I+LEP
Sbjct: 330 GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP 389
Query: 471 TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
N +V+LSNIY DA + R++V MR+ +K+ G S++E + FYS HP
Sbjct: 390 RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHP 449
Query: 531 QMKEIYRKVAELENSVMEIHRPDEKY 556
+ +E+ R + EL++ I R +E +
Sbjct: 450 RTEELQRILRELKS--FNILRDEEHF 473
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 28/245 (11%)
Query: 218 GEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP--DPVTLLA 275
G + A ++F EM+ ++++ W +M++GY N +L + +SP D V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNK------DLVSARRYFDLSPERDIVLWNT 95
Query: 276 VLSSCANLGAQVVGVEVERKIEQ--CGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
++S +G +E +Q C + N ++ YA G++ VFD M +
Sbjct: 96 MISGYIEMGNM---LEARSLFDQMPC---RDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLH 392
++V SW + F MV G V P+ VLSAC+ G D
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD---- 205
Query: 393 YFDEMERKYGLQPGPEHY-----SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
F + KYG G + L+D+ G+ G ++ AM++ K +K + D W ++
Sbjct: 206 -FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMIN 263
Query: 448 ACKIH 452
H
Sbjct: 264 GLAAH 268
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 250/488 (51%), Gaps = 41/488 (8%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPF---LARRVFDE-THNLPISYNAMISGYS 139
Q+HA +I+TG D T S +++ C+ P A VF H P +N +I G+S
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFS 100
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+S A+S+F M S+ +T + G LHG + G
Sbjct: 101 RSSFPEMAISIFIDML----CSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 200 LDADLAVMNSFLTMYV-------------------------------KCGEVELARQLFD 228
L+ D + N+ L MYV KCG ++ A+ LFD
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 229 EMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
EM R+ +SWN+M+SG+ +NG L+++ EM+ + + PD T++++L++CA LGA
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
G + I + F N + ALI+MY +CG + VF+ K + W +
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A++LF E+ RSG+ PD F+ VL+AC+H+G + +F M+ KY ++P +
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL 468
HY+ +V++LG AG L+EA LIK+M V+ D +W +LL AC+ NVE+A+ A + + +L
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 469 EPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRN 528
+P YVLLSN Y+ E + R++M+ER++ K+ GCS +E +VH F S
Sbjct: 457 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGT 516
Query: 529 HPQMKEIY 536
HP+ EIY
Sbjct: 517 HPKSAEIY 524
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 156/353 (44%), Gaps = 45/353 (12%)
Query: 26 NPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXX--XXXKSCAILSLPLTGF 83
NP WN + S+ + A+S++ ML SS K+ L G
Sbjct: 88 NPFV-WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---------------------- 121
QLH VI+ G + D + R++++ MY C A R+F
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 122 --DETHNL--------PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVT 171
D+ NL +S+N+MISG+ N F DA+ +FR M+ +D + T
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP------DGFT 260
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
M+ L++ C G +H V + + V+ + + MY KCG +E +F+
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
+ L WN+M+ G A NG R ++L+ E++ + PD V+ + VL++CA+ G E
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 292 VERKIEQCGFGSNPFLTN--ALINMYARCGNLARARAVFDGM-VDKSVVSWTA 341
R +++ + P + + ++N+ G L A A+ M V++ V W++
Sbjct: 381 FFRLMKE-KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSS 432
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 143/365 (39%), Gaps = 49/365 (13%)
Query: 20 PKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLP 79
P+R+ V +WN + + ++K+AL ++R M +CA L
Sbjct: 219 PQRNGV----SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGY 138
G +H +++R + + ++LI MY KC VF+ +S +N+MI G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ N A+ LF + R +SV+ +G+++ C +H F
Sbjct: 335 ANNGFEERAMDLFSELERSG------LEPDSVSFIGVLTACAHSGE------VHRADEFF 382
Query: 199 GLDADLAVMNSFLTMYV-------KCGEVELARQLFDEMLV-RDLISWNAMVSGYAQNGH 250
L + ++ + Y G +E A L M V D + W++++S + G+
Sbjct: 383 RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGN 442
Query: 251 ---AARVLELYHEMKLRRMSPDPVTLLAVLSSC-ANLGAQVVGVEV-----ERKIEQCGF 301
A R + L+++ PD +LS+ A+ G VE ER++E+
Sbjct: 443 VEMAKRAAKC-----LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEK-EV 496
Query: 302 GSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDE 361
G + + ++ + CG A ++D +++W ELFD
Sbjct: 497 GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD--ILNWDVSTIKSGF-------AELFDA 547
Query: 362 MVRSG 366
R G
Sbjct: 548 TTRIG 552
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 247/471 (52%), Gaps = 39/471 (8%)
Query: 79 PLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISG 137
P G ++HA +I+TG QPD L+ ++ KC AR+VFDE +S YN MISG
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC--LHGCA 195
Y + + + + L +RM G + + V G + LP C +H
Sbjct: 110 YLKHGLVKELLLLVQRMSYS-GEKADGYTLSMVLKASNSRGSTMI--LPRSLCRLVHARI 166
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML------------------------ 231
+ ++ D ++ + + YVK G++E AR +F+ M
Sbjct: 167 IKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAE 226
Query: 232 -------VRDLISWNAMVSGYAQNGHAA-RVLELYHEMKLRRMSPDPVTLLAVLSSCANL 283
V+D++ +NAMV G++++G A R +++Y M+ P+ T +V+ +C+ L
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 284 GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXX 343
+ VG +V +I + G ++ + ++L++MYA+CG + AR VFD M +K+V SWT+
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 344 XXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGL 403
A+ELF M + P+ F+ LSACSH+GL DKG F+ M+R Y +
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSM 406
Query: 404 QPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFE 463
+P EHY+C+VDL+GRAG L +A + ++M +PD +W ALL +C +H NVELA +A
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 464 HVIELEPTN-IGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYV 513
+ +L G Y+ LSN+Y+ + V ++R +M+ R++ K G S+
Sbjct: 467 ELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 148/367 (40%), Gaps = 86/367 (23%)
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPT-----GTCLHGCAVTFGLDADLAVMNSFLTMYVKC 217
+K N +S++ ++G L H+ + G +H + G DL + L +++KC
Sbjct: 24 LKQNVSSLSPAKYIAGA-LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKC 82
Query: 218 GEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVL 277
G + ARQ+FDE+ L ++N M+SGY ++G +L L M D TL VL
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 278 SSCANLGAQVVGVE-----VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
+ + G+ ++ V +I +C + L AL++ Y + G L AR VF+ M
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 333 DKSVVSWTAXXXXXXXXXXXXXAVELFD-------------------------------- 360
D++VV T+ A E+F+
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 361 EMVRSGVRPDRTVFVTVLSACS-----------HAGLTDKGLH----------------- 392
M R+G P+ + F +V+ ACS HA + G++
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 393 -------YFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVW 442
FD+M+ K ++ ++D G+ G +EA++L MK ++P+ +
Sbjct: 323 GINDARRVFDQMQEKNVFS-----WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 443 GALLGAC 449
L AC
Sbjct: 378 LGALSAC 384
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/560 (29%), Positives = 273/560 (48%), Gaps = 43/560 (7%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
+N L L+ + + + L+L+ + KS L + G ++H + +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVS 149
+ G + D Y +SL+ MY+ + +VFDE +S+N +IS Y N F DA+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
+F+RM +E F+ T++ +S C+ +L G ++ VT + + + N+
Sbjct: 134 VFKRMSQES-----NLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNA 187
Query: 210 FLTMYVKCGEVELARQLFDEML-------------------------------VRDLISW 238
+ M+ KCG ++ AR +FD M V+D++ W
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
AM++GY Q LEL+ M+ + PD L+++L+ CA GA G + I +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVEL 358
+ + AL++MYA+CG + A VF + ++ SWT+ A++L
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 359 FDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLG 418
+ EM GVR D FV VL+AC+H G +G F M ++ +QP EH SCL+DLL
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 419 RAGRLKEAMDLIKSMKVKPDGA---VWGALLGACKIHKNVELAELAFEHVIELEPTNIGY 475
RAG L EA +LI M+ + D V+ +LL A + + NV++AE E + ++E ++
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 476 YVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR--NHPQMK 533
+ LL+++Y+ A E V VR M++ +RK PGCS +E G H F GD +HP+M
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 534 EIYRKVAELENSVMEIHRPD 553
EI + + N ++++ +
Sbjct: 548 EINSMLHQTTNLMLDLEHKE 567
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER 294
L+ +N M+ A +VL L+ E++ + + PD TL VL S L + G +V
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+ G + +++N+L+ MYA G + VFD M + VVSW
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 355 AVELFDEMVR-SGVRPDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYS 411
A+ +F M + S ++ D V+ LSACS + G ++ F E + ++ G +
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG----N 186
Query: 412 CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFE 463
LVD+ + G L +A + SM+ K + W +++ ++ A + FE
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFE 237
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 19/294 (6%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
+R PV W + + ++ EAL L+R M + CA
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYS 139
G +H ++ D ++L+ MY+KC A VF E S+ ++I G +
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLA 356
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTF 198
+N M A+ L+ M V +++T + +++ CN + G H
Sbjct: 357 MNGMSGRALDLYYEME------NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEM-------LVRDLISWNAMVSGYAQNGHA 251
+ + + + + G ++ A +L D+M LV S + Y A
Sbjct: 411 NVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIA 470
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
RV E ++++ S TLLA + + AN V V RK++ G P
Sbjct: 471 ERVAEKLEKVEVSDSSAH--TLLASVYASANRWEDV--TNVRRKMKDLGIRKFP 520
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 238/462 (51%), Gaps = 42/462 (9%)
Query: 124 THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN--L 181
T +S+ + I+ + N A+A F M + N +T + L+SGC
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDM------TLAGVEPNHITFIALLSGCGDFT 85
Query: 182 PNHLPTGTCLHGCAVTFGLDADLAVM--------------------------------NS 209
G LHG A GLD + ++ N+
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ Y++ G+V+ A ++FD+M RDLISW AM++G+ + G+ L + EM++ + PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
V ++A L++C NLGA G+ V R + F +N ++N+LI++Y RCG + AR VF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
M ++VVSW + ++ F +M G +PD F L+ACSH GL ++
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
GL YF M+ Y + P EHY CLVDL RAGRL++A+ L++SM +KP+ V G+LL AC
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 450 KIH-KNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDP 508
H N+ LAE +H+ +L + YV+LSN+Y+ EG ++R M+ L+K P
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 509 GCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIH 550
G S +E +HVF +GD H + I R+V EL +S + +
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYI-REVLELISSDLRLQ 486
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 109/271 (40%), Gaps = 40/271 (14%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
+ P +W + K+ +EAL +R M S +C L
Sbjct: 165 KMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSF 224
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF-DETHNLPISYNAMISGYSL 140
G +H +V+ + + +SLI +Y +C AR+VF + +S+N++I G++
Sbjct: 225 GLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAA 284
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N +++ FR+M+ + F ++VT G ++ C+ H V GL
Sbjct: 285 NGNAHESLVYFRKMQEKG------FKPDAVTFTGALTACS-----------HVGLVEEGL 327
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
F M KC D + + + +V Y++ G L+L
Sbjct: 328 -------RYFQIM--KC----------DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
M M P+ V + ++L++C+N G +V E
Sbjct: 369 MP---MKPNEVVIGSLLAACSNHGNNIVLAE 396
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 237/451 (52%), Gaps = 8/451 (1%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G LH +++TG D + +++LI+MY KC + RV + N + + MISG
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
A+ +F M + GS + +S + +V+ C G +HG + G
Sbjct: 324 LGRAEKALIVFSEML-QSGS-----DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D +NS +TMY KCG ++ + +F+ M RDL+SWNA++SGYAQN + L L+ E
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEE 437
Query: 261 MKLRRMSP-DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
MK + + D T++++L +C++ GA VG + + + + AL++MY++CG
Sbjct: 438 MKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
L A+ FD + K VVSW A+E++ E + SG+ P+ +F+ VLS
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
+CSH G+ +GL F M R +G++P EH +C+VDLL RA R+++A K +P
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
V G +L AC+ + E+ ++ E +IEL+P + G+YV L + ++ K + V M
Sbjct: 618 DVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
R L+K PG S +E GK F+ +H
Sbjct: 678 RSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 211/444 (47%), Gaps = 16/444 (3%)
Query: 25 VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
+N T +N + LS +K+ LS + ML + K+CA L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSM 143
+H V+ G D Y SSL+++Y+K L AR+VF+E + + AMI YS +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+A SL MR + VT+L ++SG L CLH AV +G D D
Sbjct: 128 VGEACSLVNEMRFQ------GIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCD 178
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+AVMNS L +Y KC V A+ LFD+M RD++SWN M+SGYA G+ + +L+L + M+
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG 238
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
+ PD T A LS + +G + +I + GF + L ALI MY +CG
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEA 298
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
+ V + + +K VV WT A+ +F EM++SG +V+++C+
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWG 443
G D G + R +G + L+ + + G L +++ + + M + D W
Sbjct: 359 LGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWN 416
Query: 444 ALLGACKIHKNVEL--AELAFEHV 465
A++ +NV+L A L FE +
Sbjct: 417 AIISG--YAQNVDLCKALLLFEEM 438
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 7/283 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P W + + L + + ++AL ++ ML+S SCA L G
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
+H +V+R G D +SLI+MY+KC + +F+ + +S+NA+ISGY+ N
Sbjct: 367 SVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNV 426
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
A+ LF M+ + TV+ +S T++ L+ C+ LP G +H + +
Sbjct: 427 DLCKALLLFEEMKFK----TVQ-QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
V + + MY KCG +E A++ FD + +D++SW +++GY +G LE+Y E
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
M P+ V LAVLSSC++ G G+++ + + FG P
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR-DFGVEP 583
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 244/465 (52%), Gaps = 23/465 (4%)
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKC---SLPFLARRVFDETHNLPISYNAMISGYS 139
Q+H + + Q D + S L+ + S L F + + + P ++N + GYS
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYS 89
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ +++ ++ M+R N +T L+ C L G + + G
Sbjct: 90 SSDSPVESIWVYSEMKRRG------IKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHG 143
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
D D+ V N+ + +Y C + AR++FDEM R+++SWN++++ +NG V E +
Sbjct: 144 FDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFC 203
Query: 260 EMKLRRMSPDPVTLLAVLSSCA---NLGAQVVGVEVERKIE-QCGFGSNPFLTNALINMY 315
EM +R PD T++ +LS+C +LG V + R++E C G+ AL++MY
Sbjct: 204 EMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGT------ALVDMY 257
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR-SGVRPDRTVF 374
A+ G L AR VF+ MVDK+V +W+A A++LF +M++ S VRP+ F
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
+ VL ACSH GL D G YF EME+ + ++P HY +VD+LGRAGRL EA D IK M
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 435 VKPDGAVWGALLGACKIHKNVE---LAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEG 491
+PD VW LL AC IH + + + E + +IELEP G V+++N +++A+
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 492 VLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
VR +M+E K++K G S +E G H F+SG + IY
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIY 482
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 189/448 (42%), Gaps = 68/448 (15%)
Query: 26 NPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQL 85
P+T WN+ S E++ +Y M R K+CA G Q+
Sbjct: 77 TPST-WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMF 144
V++ G D Y ++LI +Y C AR+VFDE T +S+N++++ N
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
F M + +F + TM+ L+S C +L G +H + L+ +
Sbjct: 196 NLVFECFCEMIGK------RFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC 247
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE-MKL 263
+ + + MY K G +E AR +F+ M+ +++ +W+AM+ G AQ G A L+L+ + MK
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNL 321
+ P+ VT L VL +C++ G G + ++E+ P + + A++++ R G L
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKI-HKIKPMMIHYGAMVDILGRAGRL 366
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
A +D + + PD V+ T+LSAC
Sbjct: 367 NEA----------------------------------YDFIKKMPFEPDAVVWRTLLSAC 392
Query: 382 S-HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
S H D+G+ E +K ++ P+ LV + A R EA
Sbjct: 393 SIHHDEDDEGI---GEKVKKRLIELEPKRSGNLVIV---ANRFAEA-------------R 433
Query: 441 VWGALLGACKIHKNVELAELAFEHVIEL 468
+W ++ K ++ ++A E +EL
Sbjct: 434 MWAEAAEVRRVMKETKMKKIAGESCLEL 461
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 246/496 (49%), Gaps = 17/496 (3%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXX-XXXKSCAILSLP 79
+R P T WN + S + + E +S+ M+R+ K C+
Sbjct: 67 ERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQV 126
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGY 138
G +H V+R G D +S + Y KC F AR+VF E +S+ A++ Y
Sbjct: 127 RVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAY 186
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ +A S+F M + S V LV+ L + +P
Sbjct: 187 VKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK----------- 235
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
D+ S + Y K G++ AR LF+E D+ +W+A++ GYAQNG +++
Sbjct: 236 ---RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ-CGFGSNPFLTNALINMYAR 317
EM + + PD ++ ++S+C+ +G + +V+ + Q S+ ++ ALI+M A+
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG++ RA +F+ M + +VS+ + A+ LF++MV G+ PD F +
Sbjct: 353 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 412
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
L C + L ++GL YF+ M +KY + P+HYSC+V+LL R G+LKEA +LIKSM +
Sbjct: 413 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
+ WG+LLG C +H N E+AE+ H+ ELEP + G YVLLSNIY+ V +R
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Query: 498 MMRERKLRKDPGCSYV 513
M E + K G S++
Sbjct: 533 KMNENGITKICGRSWI 548
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 190/428 (44%), Gaps = 29/428 (6%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISY--NAMISGYSLN 141
Q+HA +IR G + D S IS S S E P +Y N +I GYS
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+F + VS+ RM R + ++ F V + C+ + G+ +HG + G D
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKV-----CSNNGQVRVGSSVHGLVLRIGFD 142
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D+ V SF+ Y KC ++ AR++F EM R+ +SW A+V Y ++G ++ M
Sbjct: 143 KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM 202
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
R + + ++ S + A+ + E+ ++ + ++I+ YA+ G++
Sbjct: 203 PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR--------DIISYTSMIDGYAKGGDM 254
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
AR +F+ V +W+A A ++F EM V+PD + V ++SAC
Sbjct: 255 VSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSAC 314
Query: 382 SHAG---LTDKGLHYFDEMERKYGLQPGPEHY--SCLVDLLGRAGRLKEAMDLIKSMKVK 436
S G L +K Y + K+ HY L+D+ + G + A L + M +
Sbjct: 315 SQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLR 494
D + +++ IH A FE +++ + P + + V+L + ++ E LR
Sbjct: 370 -DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL-KVCGQSRLVEEGLR 427
Query: 495 VRVMMRER 502
+MR++
Sbjct: 428 YFELMRKK 435
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 239/487 (49%), Gaps = 12/487 (2%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+W + L++ +E+ ++ M + L G H V
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNLPISYNAMISGYSLNSMFAD 146
IR D +SL+SMY K L +A ++F E N ++N M+ GY
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE-AWNTMLKGYGKMKCHVK 416
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
+ LFR+++ + +S + ++S C+ + G LH V LD ++V
Sbjct: 417 CIELFRKIQ------NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+NS + +Y K G++ +A ++F E ++I+WNAM++ Y + + + L+ M
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENF 529
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
P +TL+ +L +C N G+ G + R I + N L+ ALI+MYA+CG+L ++R
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRE 589
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+FD K V W A+ LFD+M S V+P F+ +LSAC+HAGL
Sbjct: 590 LFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
++G F +M +Y ++P +HYSCLVDLL R+G L+EA + SM PDG +WG LL
Sbjct: 650 VEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 708
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
+C H E+ E + +P N GYY++L+N+YS A E R R MMRE + K
Sbjct: 709 SSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGK 768
Query: 507 DPGCSYV 513
G S V
Sbjct: 769 RAGHSVV 775
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 12/320 (3%)
Query: 77 SLPLTGFQLHAHVIRTGS-QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAM 134
SL L + H +I TG + + S LIS Y+ P L+ RVF I +N++
Sbjct: 37 SLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
I + N +A ++ F M G S F T +VS C GT +HG
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLL-SGQSPDHF-----TAPMVVSACAELLWFHVGTFVHGL 150
Query: 195 AVTF-GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAAR 253
+ G D + AV SF+ Y KCG ++ A +FDEM RD+++W A++SG+ QNG +
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 254 VLELY---HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
L H P+P TL +C+NLGA G + + G S+ F+ ++
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS 270
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + Y++ GN + A F + D+ + SWT+ + ++F EM G+ PD
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330
Query: 371 RTVFVTVLSACSHAGLTDKG 390
V +++ L +G
Sbjct: 331 GVVISCLINELGKMMLVPQG 350
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 188/456 (41%), Gaps = 15/456 (3%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + Y +L + ML S +CA L G +H V+
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 91 RTGS-QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAV 148
+ G + +S + YSKC A VFDE + + ++ A+ISG+ N +
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
+M GS K N T+ C+ L G CLHG AV GL + V +
Sbjct: 213 GYLCKMHSA-GSDVDKPN--PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQS 269
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
S + Y K G A F E+ D+ SW ++++ A++G +++ EM+ + M P
Sbjct: 270 SMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP 329
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
D V + +++ + G + + F + + N+L++MY + L+ A +F
Sbjct: 330 DGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF 389
Query: 329 DGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG-- 385
+ ++ + +W +ELF ++ G+ D +V+S+CSH G
Sbjct: 390 CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Query: 386 LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGAL 445
L K LH + K L + L+DL G+ G L A + + + W A+
Sbjct: 450 LLGKSLHCY---VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAM 504
Query: 446 LGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLL 479
+ + + E A F+ ++ +P++I LL
Sbjct: 505 IASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 37/288 (12%)
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVL 255
+T GL ++ V + ++ Y G+ L+ ++F + RD+ WN+++ + NG AR L
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI-EQCGFGSNPFLTNALINM 314
+ M L SPD T V+S+CA L VG V + + GF N + + +
Sbjct: 111 CFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYF 170
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV---RPDR 371
Y++CG L A VFD M D+ VV+WTA + +M +G +P+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 372 TVFVTVLSACSHAGLTDKG--LHYF-------------DEMERKYGLQPGPEH------- 409
ACS+ G +G LH F M Y P
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 410 --------YSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALL 446
++ ++ L R+G ++E+ D+ M+ K PDG V L+
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 248/495 (50%), Gaps = 64/495 (12%)
Query: 102 SSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGS 160
SS++ Y K AR +FD T I++ AMI GY F D LF RMR+E
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE--- 268
Query: 161 STVKFNFNSVTML-----------------GLVSGCNLPNHLPTGTCLHG---------- 193
VK N N++ ++ GLVS L L G L
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 194 CAVTFGL--DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
FG+ + D NS +T V+ ++ A +LF++M +D++SW M+ G++ G
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEI 388
Query: 252 ARVLELY-------------------------------HEMKLRRMSPDPVTLLAVLSSC 280
++ +EL+ H+M + + P+ T +VLS+
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 281 ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWT 340
A+L + G+++ ++ + ++ + N+L++MY +CGN A +F + + ++VS+
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERK 400
A++LF + SG P+ F+ +LSAC H G D G YF M+
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 401 YGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAEL 460
Y ++PGP+HY+C+VDLLGR+G L +A +LI +M KP VWG+LL A K H V+LAEL
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 461 AFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVH 520
A + +IELEP + YV+LS +YS + R+ + + ++++KDPG S++ KG+VH
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH 688
Query: 521 VFYSGDRNHPQMKEI 535
F +GD + ++EI
Sbjct: 689 NFLAGDESQLNLEEI 703
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 27/345 (7%)
Query: 109 SKCSLPFLARRVFDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFN 168
+KC L D +SY MI+G+ F +A L+ + VKF +
Sbjct: 125 NKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY-------AETPVKFR-D 176
Query: 169 SVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA-DLAVMNSFLTMYVKCGEVELARQLF 227
SV L+SG +L G V G+ ++ +S + Y K G + AR LF
Sbjct: 177 SVASNVLLSG-----YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 228 DEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR-RMSPDPVTLLAVLSSCANLGAQ 286
D M R++I+W AM+ GY + G L+ M+ + + TL + +C +
Sbjct: 232 DRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 287 VVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXX 346
G ++ + + + FL N+L++MY++ G + A+AVF M +K VSW +
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGL 351
Query: 347 XXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPG 406
A ELF++M D + ++ S G K + F M K +
Sbjct: 352 VQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-- 405
Query: 407 PEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA 448
++ ++ G +EA+ M +V P+ + ++L A
Sbjct: 406 ---WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 9/158 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P W + Y+EAL + ML+ + A L+ + G
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLN 141
Q+H V++ D ++SL+SMY KC A ++F N+ +SYN MISGYS N
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI-VSYNTMISGYSYN 517
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC 179
A+ LF M G N VT L L+S C
Sbjct: 518 GFGKKALKLF-SMLESSGKEP-----NGVTFLALLSAC 549
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 30/219 (13%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
NS ++ + + G ++ A +F +M R ++SW AM+S YA+NG ++ +++ EM +R +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 268 PDPVTLLAVLSSCANLG-AQVVGVEVERK------------IEQCGFGSNPFL------- 307
+ A++ + +LG A + ++ K + F FL
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 308 ------TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDE 361
+N L++ Y R G A VF GM K VVS ++ A LFD
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 362 MVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERK 400
M V + ++ AG + G F M ++
Sbjct: 234 MTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 244/491 (49%), Gaps = 49/491 (9%)
Query: 47 ALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLIS 106
+L LY MLR S K+ + S G L AH+ + G +++LI
Sbjct: 855 SLELYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLID 912
Query: 107 MYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKF 165
YS AR+VFDE I++ M+S Y RR
Sbjct: 913 FYSATGRIREARKVFDEMPERDDIAWTTMVSAY----------------RR--------- 947
Query: 166 NFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQ 225
+L + S +L N + + + A N + Y+ G +E A
Sbjct: 948 ------VLDMDSANSLANQMS--------------EKNEATSNCLINGYMGLGNLEQAES 987
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA 285
LF++M V+D+ISW M+ GY+QN + ++++M + PD VT+ V+S+CA+LG
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1047
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXX 345
+G EV Q GF + ++ +AL++MY++CG+L RA VF + K++ W +
Sbjct: 1048 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1107
Query: 346 XXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP 405
A+++F +M V+P+ FV+V +AC+HAGL D+G + M Y +
Sbjct: 1108 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVS 1167
Query: 406 GPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV 465
EHY +V L +AG + EA++LI +M+ +P+ +WGALL C+IHKN+ +AE+AF +
Sbjct: 1168 NVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
Query: 466 IELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD-PGCSYVEYKGKVHVFYS 524
+ LEP N GYY LL ++Y++ V +R MRE + K PG S + + H+F +
Sbjct: 1228 MVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAA 1287
Query: 525 GDRNHPQMKEI 535
D++H E+
Sbjct: 1288 ADKSHSASDEV 1298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 21/280 (7%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
++ C+ P L + + L+ D +MN F+T ++LA +M +
Sbjct: 779 IIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER 294
+ +NA+ G+ H R LELY M +SP T +++ A+ A G ++
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK--ASSFASRFGESLQA 893
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
I + GFG + + LI+ Y+ G + AR VFD M ++ ++WT
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE--HYSC 412
A L ++M S C G GL ++ E + P + ++
Sbjct: 954 ANSLANQMSEKN---------EATSNCLINGYM--GLGNLEQAESLFNQMPVKDIISWTT 1002
Query: 413 LVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGAC 449
++ + R +EA+ + M + PD ++ AC
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 1042
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +W + S+ ++Y+EA++++ M+ +CA L + G
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYS 139
++H + ++ G D Y S+L+ MYSKC A VF NLP +N++I G +
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF---FNLPKKNLFCWNSIIEGLA 1109
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV-TF 198
+ +A+ +F +M E +VK N+VT + + + C + G ++ + +
Sbjct: 1110 AHGFAQEALKMFAKMEME----SVK--PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 1163
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSG 244
+ +++ + ++ K G + A +L M + + W A++ G
Sbjct: 1164 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 251/475 (52%), Gaps = 39/475 (8%)
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFL------ARRVFDETHNLPIS--YNAMISG 137
H+ I G + Y S L++ + LP L A +FD +P S Y+ MI
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHFHYASSIFDSI-EIPNSFVYDTMIRI 87
Query: 138 YSLNSMFADAVSLFRRMRREDGS----STVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG 193
S +S + F M +E+ S + F+F L+ C G +H
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF-------LIVACLKACFFSVGKQIHC 140
Query: 194 CAVTFGLD-ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAA 252
V G+ +D V L +YV+ + AR++FDE+ D++ W+ +++GY + G +
Sbjct: 141 WVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGS 200
Query: 253 RVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG------VEVERKIEQCGFGSNPF 306
LE++ EM +R + PD ++ L++CA +GA G V+ +R IE S+ F
Sbjct: 201 EGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE-----SDVF 255
Query: 307 LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR-S 365
+ AL++MYA+CG + A VF+ + ++V SW A A D + R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
G++PD V + VL+AC+H G ++G + ME +YG+ P EHYSC+VDL+ RAGRL +
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375
Query: 426 AMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNI----GYYVLLSN 481
A+DLI+ M +KP +VWGALL C+ HKNVEL ELA +++++LE N+ V LSN
Sbjct: 376 ALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSN 435
Query: 482 IYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
IY + + +VR M+ +R +RK PG S +E G V F SGD +HP + +I+
Sbjct: 436 IYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIH 490
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 243/451 (53%), Gaps = 19/451 (4%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI- 129
K+C S G Q+H V + G D Y ++SL+ Y C A +VF E +P+
Sbjct: 114 KACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGE---MPVR 170
Query: 130 ---SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
S+ +I+G++ ++ +A+ F +M E +T + V + GC L
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLAT----YVCVLVSSGRVGC-----LS 221
Query: 187 TGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
G +HG + L N+ + MYVKC ++ A ++F E+ +D +SWN+M+SG
Sbjct: 222 LGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLV 281
Query: 247 QNGHAARVLELYHEMKLRR-MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ ++L+ M+ + PD L +VLS+CA+LGA G V I G +
Sbjct: 282 HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDT 341
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
+ A+++MYA+CG + A +F+G+ K+V +W A ++ F+EMV+
Sbjct: 342 HIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEME-RKYGLQPGPEHYSCLVDLLGRAGRLK 424
G +P+ F+ L+AC H GL D+G YF +M+ R+Y L P EHY C++DLL RAG L
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Query: 425 EAMDLIKSMKVKPDGAVWGALLGACKIHKNV-ELAELAFEHVIELEPTNIGYYVLLSNIY 483
EA++L+K+M VKPD + GA+L ACK + EL + + +++E + G YVLLSNI+
Sbjct: 462 EALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIF 521
Query: 484 SDAKNSEGVLRVRVMMRERKLRKDPGCSYVE 514
+ + + V R+R +M+ + + K PG SY+E
Sbjct: 522 AANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 159/341 (46%), Gaps = 14/341 (4%)
Query: 130 SYNAMISGYSLNSMFADAVSLFR-RMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
SYN ++S Y++ V++F + +G S F F V C + + G
Sbjct: 73 SYNTLLSSYAVCD--KPRVTIFAYKTFVSNGFSPDMFTFPPV-----FKACGKFSGIREG 125
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+HG G D+ V NS + Y CGE A ++F EM VRD++SW +++G+ +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G L+ + +M + P+ T + VL S +G +G + I + +
Sbjct: 186 GLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM-VRSGV 367
NALI+MY +C L+ A VF + K VSW + A++LF M SG+
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
+PD + +VLSAC+ G D G + E G++ + +VD+ + G ++ A+
Sbjct: 303 KPDGHILTSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL 468
++ ++ K + W ALLG IH + + FE +++L
Sbjct: 362 EIFNGIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 11/311 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
PV +W + ++ YKEAL + M LSL G
Sbjct: 168 PVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSL---GK 224
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNS 142
+H +++ S T ++LI MY KC A RVF E +S+N+MISG
Sbjct: 225 GIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCE 284
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+A+ LF M+ SS +K + + +T ++S C + G +H +T G+
Sbjct: 285 RSKEAIDLFSLMQT---SSGIKPDGHILT--SVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D + + + MY KCG +E A ++F+ + +++ +WNA++ G A +GH L + EM
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGN 320
P+ VT LA L++C + G G K++ + P L + +I++ R G
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 321 LARARAVFDGM 331
L A + M
Sbjct: 460 LDEALELVKAM 470
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/584 (30%), Positives = 273/584 (46%), Gaps = 75/584 (12%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN L Y+ AL LYR M + ++C L H VI
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI----SYNAMISGYSLNSMFAD 146
+ G + + + + L+++Y K A +F E +P+ S+N MI G+S
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVE---MPVRNRMSWNVMIKGFSQEYDCES 242
Query: 147 AVSLFRRMRRED--------------GSSTVKFN-----FNSVTMLG-LVSG-------- 178
AV +F M+RE+ S KF F+ + M G VSG
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 179 -CNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS 237
C L +HG + G + L N+ + +Y K G+V+ A LF ++ + + S
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES 362
Query: 238 WNAMVSGYAQNG----------------HAARV-----------------------LELY 258
WN++++ + G H V LE +
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
+M+ ++ + VT+ +LS CA L A +G E+ + + N + NAL+NMYA+C
Sbjct: 423 RQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKC 482
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G L+ VF+ + DK ++SW + A+ +FD M+ SG PD V VL
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVL 542
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
SACSHAGL +KG F M +++GL+P EHY+C+VDLLGR G LKEA +++K+M ++P
Sbjct: 543 SACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK 602
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
V GALL +C++HKNV++AE + LEP G Y+LLSNIYS E VR +
Sbjct: 603 VCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRAL 662
Query: 499 MRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAEL 542
+++ L+K G S++E K K + F SG + + IY + +L
Sbjct: 663 AKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 153/364 (42%), Gaps = 60/364 (16%)
Query: 84 QLHAHVI------RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS----YNA 133
Q+HA V+ R+GS ++LIS+Y++ L AR VF+ + +S +N+
Sbjct: 74 QVHAQVLLSDFIFRSGSLA-----ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNS 128
Query: 134 MISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG 193
++ + ++ +A+ L+R MR+ + + + ++ C H
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTG------DGYILPLILRACRYLGRFGLCRAFHT 182
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAAR 253
+ GL +L V+N LT+Y K G + A LF EM VR+ +SWN M+ G++Q
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSS---------------------------------- 279
++++ M+ PD VT +VLS
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 280 -CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVS 338
CA L A + +V + + GF NALI++Y + G + A +F + +K + S
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES 362
Query: 339 WTAXXXXXXXXXXXXXAVELFDEMVR----SGVRPDRTVFVTVLSACSHAGLTDKGLHYF 394
W + A+ LF E+ V+ + + +V+ C+ G D L YF
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 395 DEME 398
+M+
Sbjct: 423 RQMQ 426
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 239/448 (53%), Gaps = 21/448 (4%)
Query: 80 LTGFQLHAHVIRTGSQP----DPYTRSSLI-SMYSKCSLPFLARRVFDETH------NLP 128
T F H + T S P R+ L+ ++ S C+ RR+ + P
Sbjct: 21 FTIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYP 80
Query: 129 ISY--NAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
I++ N ++ Y + DA+ ++ M R STV + S+ ++ + +
Sbjct: 81 IAFLWNNIMRSYIRHESPLDAIQVYLGMVR----STVLPDRYSLPIV--IKAAVQIHDFT 134
Query: 187 TGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
G LH AV G D + F+T+Y K GE E AR++FDE R L SWNA++ G
Sbjct: 135 LGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF--GSN 304
G A +E++ +MK + PD T+++V +SC LG + ++ + + Q S+
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD 254
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
+ N+LI+MY +CG + A +F+ M ++VVSW++ A+E F +M
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE 314
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
GVRP++ FV VLSAC H GL ++G YF M+ ++ L+PG HY C+VDLL R G+LK
Sbjct: 315 FGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 425 EAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYS 484
EA +++ M +KP+ VWG L+G C+ +VE+AE +++ELEP N G YV+L+N+Y+
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYA 434
Query: 485 DAKNSEGVLRVRVMMRERKLRKDPGCSY 512
+ V RVR +M+ +K+ K P SY
Sbjct: 435 LRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 13/315 (4%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + + +A+ +Y M+RS+ K+ + G +LH+ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADAVS 149
R G D + S I++Y K AR+VFDE + S+NA+I G + +AV
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD--ADLAVM 207
+F M+R + TM+ + + C L LH C + + +D+ ++
Sbjct: 205 MFVDMKRSG------LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
NS + MY KCG ++LA +F+EM R+++SW++M+ GYA NG+ LE + +M+ +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNLARAR 325
P+ +T + VLS+C + G V + + + F P L++ ++++ +R G L A+
Sbjct: 319 PNKITFVGVLSACVH-GGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 326 AVFDGMVDK-SVVSW 339
V + M K +V+ W
Sbjct: 378 KVVEEMPMKPNVMVW 392
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
Query: 23 HPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTG 82
+P +WN + L+ + EA+ ++ M RS SC L
Sbjct: 178 NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLA 237
Query: 83 FQLHAHVI--RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYS 139
FQLH V+ +T + D +SLI MY KC LA +F+E +S+++MI GY+
Sbjct: 238 FQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA 297
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTF 198
N +A+ FR+M RE G N +T +G++S C + G T F
Sbjct: 298 ANGNTLEALECFRQM-REFGVRP-----NKITFVGVLSACVHGGLVEEGKTYFAMMKSEF 351
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNG 249
L+ L+ + + + G+++ A+++ +EM ++ +++ W ++ G + G
Sbjct: 352 ELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 222/404 (54%), Gaps = 10/404 (2%)
Query: 114 PFLARRVFDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTML 173
FL ET +L S+N++ISG + + +++ F+ M RE K + +T+L
Sbjct: 532 AFLRLETMSETRDLT-SWNSVISGCASSGHHLESLRAFQAMSREG-----KIRHDLITLL 585
Query: 174 GLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR 233
G +S + G C HG A+ + D + N+ +TMY +C ++E A ++F +
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 234 DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
+L SWN ++S +QN V +L+ +KL P+ +T + +LS+ LG+ G++
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXX 353
+ + GF +NPF++ AL++MY+ CG L VF S+ +W +
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGE 762
Query: 354 XAVELFDEMV-RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSC 412
A+ELF E+ S + P+++ F+++LSACSH+G D+GL Y+ +ME K+G++P EH
Sbjct: 763 KAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW 822
Query: 413 LVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTN 472
+VD+LGRAG+L+EA + I + VWGALL AC H + +L + E + E+EP N
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN 882
Query: 473 IGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYK 516
YY+ L+N Y E +R+R M+ + L+K PG S ++ +
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 212/488 (43%), Gaps = 38/488 (7%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+WN + + +++L ++ M S +C+ + G LH V
Sbjct: 256 SWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV 315
Query: 90 IRTGSQPDPYTR--SSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFAD 146
I++G P+ + +S+ISMYSKC A VF+E IS NA+++G++ N MF +
Sbjct: 316 IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA-DLA 205
A + +M+ D K + T++ + S C + G +HG V + + L
Sbjct: 376 AFGILNQMQSVD-----KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG--HAARVL--ELYHEM 261
V+NS + MY KCG A LF RDL+SWN+M+S ++QNG H A+ L E+ E
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+ S T+LA+L+SC + + + G V +++ G ++ FL R +
Sbjct: 491 SCSKFSLS--TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL---------RLETM 539
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSA 380
+ R + SW + ++ F M R G +R D + +SA
Sbjct: 540 SETR---------DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 590
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
+ GL +G F + K + + + L+ + GR ++ A+ + + P+
Sbjct: 591 SGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF-GLISDPNLC 648
Query: 441 VWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
W ++ A +K F + ++LEP I + LLS S G ++ +
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRN-LKLEPNEITFVGLLSASTQLGSTSYG-MQAHCHLI 706
Query: 501 ERKLRKDP 508
R + +P
Sbjct: 707 RRGFQANP 714
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 189/432 (43%), Gaps = 45/432 (10%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVI 90
WN + L++ +Y A+ L+ M+ + + L L LH I
Sbjct: 156 WNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI 215
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVS 149
TG D ++L+++Y+K A VF H +S+N +++ N ++
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL--DADLAVM 207
F+ M + ++VT ++S C+ L G LHG + G +A ++V
Sbjct: 276 YFKSMTGSGQEA------DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK-LRRM 266
NS ++MY KCG+ E A +F+E++ RD+IS NA+++G+A NG + ++M+ + ++
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 267 SPDPVTLLAVLSSCANL-----GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
PD T++++ S C +L G V G V +++ + N++I+MY +CG
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE----VINSVIDMYGKCGLT 445
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR--SGVRPDRTVFVTVLS 379
+A +F + +VSW + A LF E+V S + + + +L+
Sbjct: 446 TQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILT 505
Query: 380 AC--SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
+C S + + K +H + L + G L A +++M
Sbjct: 506 SCDSSDSLIFGKSVHCW----------------------LQKLGDLTSAFLRLETMSETR 543
Query: 438 DGAVWGALLGAC 449
D W +++ C
Sbjct: 544 DLTSWNSVISGC 555
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 171/386 (44%), Gaps = 11/386 (2%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSM 143
+H ++ G D T S L++ Y + + +FDE I +N+MI+ + N
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+ AV LF M + F+S T+L S + + + LH A+ GL D
Sbjct: 169 YIAAVGLFIEMIHKGN------EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGD 222
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
++ N+ + +Y K + A +F M RD++SWN +++ NGH + L+ + M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT--NALINMYARCGNL 321
D VT V+S+C+++ +G + + + G+ ++ N++I+MY++CG+
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR-SGVRPDRTVFVTVLSA 380
A VF+ +V + V+S A A + ++M ++PD V++ S
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
C + +G R E + ++D+ G+ G +A L K+ + D
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLV 461
Query: 441 VWGALLGACKIHKNVELAELAFEHVI 466
W +++ A + A+ F+ V+
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVV 487
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 15/308 (4%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCA-ILSLPLTGFQLHA 87
T+WN + + + E+L ++ M R S + L L L G H
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG 605
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFAD 146
I++ + D +++LI+MY +C A +VF + + S+N +IS S N +
Sbjct: 606 LAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGRE 665
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
LFR ++ E N +T +GL+S G H + G A+ V
Sbjct: 666 VFQLFRNLKLEP---------NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR-R 265
+ + MY CG +E ++F V + +WN+++S + +G + +EL+ E+
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA--LINMYARCGNLAR 323
M P+ + +++LS+C++ G G+ +++E+ FG P + +++M R G L
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEE-KFGVKPVTEHRVWIVDMLGRAGKLRE 835
Query: 324 ARAVFDGM 331
A G+
Sbjct: 836 AYEFITGI 843
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 227/409 (55%), Gaps = 20/409 (4%)
Query: 102 SSLISMYSKCSLPFLARRVFD---ETHNLPISYNAMISGYSLNSMFADAVSLFRRMRRED 158
S L+ +Y+ C +A VFD + + P ++N++ISGY+ + DA++L+ +M ED
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMA-ED 189
Query: 159 GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCG 218
G +F F V + C + G +H V G D+ V+N+ + MY KCG
Sbjct: 190 GVKPDRFTFPRV-----LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCG 244
Query: 219 EVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLS 278
++ AR +FD + +D +SWN+M++GY +G L+++ M + PD V + +VL+
Sbjct: 245 DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
Query: 279 SCANL--GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV 336
+ G Q+ G + R +E + NALI +Y++ G L +A +FD M+++
Sbjct: 305 RVLSFKHGRQLHGWVIRRGMEW-----ELSVANALIVLYSKRGQLGQACFIFDQMLERDT 359
Query: 337 VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDE 396
VSW A ++ F++M R+ +PD FV+VLS C++ G+ + G F
Sbjct: 360 VSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSL 416
Query: 397 MERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI-KSMKVKPDGAVWGALLGACKIHKNV 455
M ++YG+ P EHY+C+V+L GRAG ++EA +I + M ++ VWGALL AC +H N
Sbjct: 417 MSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNT 476
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
++ E+A + + ELEP N + LL IYS AK +E V RVR MM +R L
Sbjct: 477 DIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 190/410 (46%), Gaps = 54/410 (13%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
AWN + ++ QY++A++LY M K+C + G +H +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAV 148
++ G D Y ++L+ MY+KC AR VFD H +S+N+M++GY + + +A+
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
+FR M ++G K +SV L G LHG + G++ +L+V N
Sbjct: 282 DIFRLM-VQNGIEPDKVAISSVLARVL--------SFKHGRQLHGWVIRRGMEWELSVAN 332
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + +Y K G++ A +FD+ML RD +SWNA++S +++N + + E H + P
Sbjct: 333 ALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAK---P 389
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCGNLARARA 326
D +T ++VLS CAN G G + + + +G +P + + ++N+Y R G + A +
Sbjct: 390 DGITFVSVLSLCANTGMVEDGERLFSLMSK-EYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+ + EM G+ TV+ +L AC G
Sbjct: 449 M------------------------------IVQEM---GLEAGPTVWGALLYACYLHGN 475
Query: 387 TDKGLHYFDEMERKYGLQPGPEH-YSCLVDLLGRAGRLKEAMDLIKSMKV 435
TD G +R + L+P EH + L+ + +A R E ++ ++ M V
Sbjct: 476 TDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKR-AEDVERVRQMMV 521
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 148/308 (48%), Gaps = 8/308 (2%)
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
L+ C + G +H + L +L + + + +Y CG E+A ++FD M RD
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 235 L--ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEV 292
+WN+++SGYA+ G + LY +M + PD T VL +C +G+ +G +
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 293 ERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXX 352
R + + GFG + ++ NAL+ MYA+CG++ +AR VFD + K VSW +
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 353 XXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSC 412
A+++F MV++G+ PD+ +VL+ L+ K + G++ +
Sbjct: 278 HEALDIFRLMVQNGIEPDKVAISSVLARV----LSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 413 LVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTN 472
L+ L + G+L +A + M ++ D W A++ A + N L H +P
Sbjct: 334 LIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISAHSKNSN-GLKYFEQMHRANAKPDG 391
Query: 473 IGYYVLLS 480
I + +LS
Sbjct: 392 ITFVSVLS 399
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+P ++L +C +L A GV V I +N +++ L+ +YA CG A VF
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 329 DGMV--DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
D M D S +W + A+ L+ +M GV+PDR F VL AC G
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
G ++ ++ G + LV + + G + +A ++ + K D W ++L
Sbjct: 211 VQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSML 268
Query: 447 GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYS 484
H + A F +++ +EP + +L+ + S
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS 308
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 244/480 (50%), Gaps = 53/480 (11%)
Query: 71 KSCA-ILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI 129
++CA ++ + G LH+ I+ G D SSLISMY KC AR+VFDE +
Sbjct: 53 RACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNV 112
Query: 130 -SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN-------- 180
++NAMI GY N A LF + N+VT + ++ G
Sbjct: 113 ATWNAMIGGYMSNGDAVLASGLFEE---------ISVCRNTVTWIEMIKGYGKRIEIEKA 163
Query: 181 ------LPNHLPTGTCLHGCAVTFGL--------DA-----DLAVMNSF-----LTMYVK 216
+P L + +V G+ DA D+ N+F ++ Y +
Sbjct: 164 RELFERMPFELKN---VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFR 220
Query: 217 CGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAV 276
G+V AR +F + RDL+ WN +++GYAQNG++ ++ + M+ PD VT+ ++
Sbjct: 221 IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 277 LSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV 336
LS+CA G VG EV I G N F++NALI+MYA+CG+L A +VF+ + +SV
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV 340
Query: 337 VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDE 396
+ A+E+F M ++PD F+ VL+AC H G +GL F E
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSE 400
Query: 397 MERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVE 456
M+ + ++P +H+ CL+ LLGR+G+LKEA L+K M VKP+ V GALLGACK+H + E
Sbjct: 401 MKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTE 459
Query: 457 LAELAFEHVIELEPTNIGYY-----VLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCS 511
+AE + +IE + Y +SN+Y+ + + +RV M +R L K PG S
Sbjct: 460 MAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 230/448 (51%), Gaps = 14/448 (3%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL--P 128
KSC+ G LH +R+G R++LI Y C AR+VFDE
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++++ +++GY S A A+ LFR MR+ + N T+L +S + L
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSE------VVVNVSTLLSFLSAISDLGDLSGA 246
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
H + GLD DL ++ + + MY K G + AR++FD + +D+++WN M+ YA+
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G + L +MK +M P+ T + +LSSCA A VG V +E+ + L
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG 366
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-- 366
AL++MYA+ G L +A +F+ M DK V SWTA AV LF++M
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
VRP+ F+ VL+ACSH GL +G+ F M Y P EHY C+VDLLGRAG+L+EA
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDA 486
+LI+++ + D W ALL AC+++ N +L E + E+ T+ +LL+ ++ A
Sbjct: 487 YELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Query: 487 KNSEGVLRVRVMMRERKLRKDPGCSYVE 514
N E L + K RK+ G S +E
Sbjct: 547 GNPEKSLDNEL----NKGRKEAGYSAIE 570
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 196/404 (48%), Gaps = 17/404 (4%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
++H ++++TG D + S L++ S + + A +F+ N + +N MI GYS++
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRY-ASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
A S+F ++R + G + +F+F +T L C+ + G LHG A+ G
Sbjct: 105 EPERAFSVFNQLRAK-GLTLDRFSF--ITTL---KSCSRELCVSIGEGLHGIALRSGFMV 158
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEM-LVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ N+ + Y CG++ AR++FDEM D ++++ +++GY Q A L+L+ M
Sbjct: 159 FTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM 218
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI-EQCGFGSNPFLTNALINMYARCGN 320
+ + + TLL+ LS+ ++LG + G E + + G + L ALI MY + G
Sbjct: 219 RKSEVVVNVSTLLSFLSAISDLG-DLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
++ AR +FD + K VV+W V L +M ++P+ + FV +LS+
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
C+++ G D +E + + + LVD+ + G L++A+++ MK K D
Sbjct: 338 CAYSEAAFVGRTVADLLEEER-IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK-DVK 395
Query: 441 VWGALLGACKIHKNVELAELAF----EHVIELEPTNIGYYVLLS 480
W A++ H A F E ++ P I + V+L+
Sbjct: 396 SWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 143/352 (40%), Gaps = 40/352 (11%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+HG V GLD D ++ L + ++ A +F+ + +L +N M+ GY+ +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
R ++++++ + ++ D + + L SC+ +G + + GF L NA
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 311 LINMYARCGNLARARAVFDGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRP 369
LI+ Y CG ++ AR VFD M V+++ A++LF M +S V
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 370 DRTVFVTVLSA----------------CSHAGLTDKGLHYFDEMERKYGLQPGPEH---- 409
+ + ++ LSA C GL D LH + YG G
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL-DLDLHLITALIGMYGKTGGISSARRI 284
Query: 410 -----------YSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHKNV 455
++C++D + G L+E + L++ M K+KP+ + + LL +C +
Sbjct: 285 FDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAA 344
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
+ + LE I +L D G+L V + R KD
Sbjct: 345 FVGRTVADL---LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 232/437 (53%), Gaps = 15/437 (3%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
Q+HA +I G Y S L+ + S L + A + + N + YN +IS N
Sbjct: 27 QIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY-ALSILRQIPNPSVFLYNTLISSIVSNH 85
Query: 143 MFAD---AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF- 198
A SL+ ++ S+ V+ N + L SG + H G LH + F
Sbjct: 86 NSTQTHLAFSLYDQILSSR-SNFVRPNEFTYPSLFKASGFDAQWH-RHGRALHAHVLKFL 143
Query: 199 -GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA---ARV 254
++ D V + + Y CG++ AR LF+ + DL +WN +++ YA + V
Sbjct: 144 EPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEV 203
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
L L+ M++R P+ ++L+A++ SCANLG V GV + + N F+ +LI++
Sbjct: 204 LLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDL 260
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
Y++CG L+ AR VFD M + V + A +EL+ ++ G+ PD F
Sbjct: 261 YSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATF 320
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
V +SACSH+GL D+GL F+ M+ YG++P EHY CLVDLLGR+GRL+EA + IK M
Sbjct: 321 VVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMP 380
Query: 435 VKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLR 494
VKP+ +W + LG+ + H + E E+A +H++ LE N G YVLLSNIY+ V +
Sbjct: 381 VKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEK 440
Query: 495 VRVMMRERKLRKDPGCS 511
R +M++ ++ K PG S
Sbjct: 441 TRELMKDHRVNKSPGIS 457
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS 130
KSCA L + G H +V++ + + +SLI +YSKC AR+VFDE +S
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVS 283
Query: 131 -YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG- 188
YNAMI G +++ + + L++ + + +S T + +S C+ + G
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVP------DSATFVVTISACSHSGLVDEGL 337
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQ 247
+ +G++ + + + + G +E A + +M V+ + W + +
Sbjct: 338 QIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQT 397
Query: 248 NGHAAR 253
+G R
Sbjct: 398 HGDFER 403
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 254/483 (52%), Gaps = 29/483 (6%)
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFL------ARRVFDETHNLPIS--YNAMISG 137
H+ I G + Y S L++ + LP L A +FD +P S Y+ MI
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHFHYASSIFDSI-EIPNSFVYDTMIRI 87
Query: 138 YSLNSMFADAVSLFRRMRRED----GSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG 193
S +S + F M +E+ S + F+F L+ C G +H
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHF-------LIVACLKACFFSVGKQIHC 140
Query: 194 CAVTFGLD-ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAA 252
V G+ +D V L +YV+ + AR++FDE+ D++ W+ +++GY + G +
Sbjct: 141 WVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGS 200
Query: 253 RVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF-GSNPFLTNAL 311
LE++ EM ++ + PD ++ L++CA +GA G + +++ + S+ F+ AL
Sbjct: 201 EGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTAL 260
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR-SGVRPD 370
++MYA+CG + A VF + ++V SW A A+ + + R G++PD
Sbjct: 261 VDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPD 320
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
V + VL+AC+H G ++G + ME +Y + P EHYSC+VDL+ RAGRL +A++LI
Sbjct: 321 SVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLI 380
Query: 431 KSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNI----GYYVLLSNIYSDA 486
+ M +KP +VWGALL C+ HKNVEL ELA +++++LE N+ V LSNIY
Sbjct: 381 EKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSV 440
Query: 487 KNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV 546
+ + +VR M+ +R +RK PG S +E G V F SGD +HP + +I+ + L
Sbjct: 441 QRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVDA 500
Query: 547 MEI 549
++I
Sbjct: 501 LQI 503
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 233/436 (53%), Gaps = 53/436 (12%)
Query: 117 ARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLG 174
ARR+FD N+ IS+NAMI+GY+ N+ +A LF+ M
Sbjct: 221 ARRLFDCMPERNI-ISWNAMITGYAQNNRIDEADQLFQVM-------------------- 259
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
P + D A N+ +T +++ E+ A LFD M ++
Sbjct: 260 -----------P--------------ERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMS--PDPVTLLAVLSSCANLGAQVVGVEV 292
+ISW M++GY +N L ++ +M LR S P+ T +++LS+C++L V G ++
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKM-LRDGSVKPNVGTYVSILSACSDLAGLVEGQQI 353
Query: 293 ERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD-GMV-DKSVVSWTAXXXXXXXXX 350
+ I + N +T+AL+NMY++ G L AR +FD G+V + ++SW +
Sbjct: 354 HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHG 413
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+E++++M + G +P ++ +L ACSHAGL +KG+ +F ++ R L EHY
Sbjct: 414 HGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHY 473
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
+CLVDL GRAGRLK+ + I + + +GA+L AC +H V +A+ + V+E
Sbjct: 474 TCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGS 533
Query: 471 TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
+ G YVL+SNIY+ E +R+ M+E+ L+K PGCS+V+ + H+F GD++HP
Sbjct: 534 DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHP 593
Query: 531 QMKEIYRKVAELENSV 546
Q + + +++L N +
Sbjct: 594 QFEALDSILSDLRNKM 609
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 178/398 (44%), Gaps = 43/398 (10%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLFR 152
+ D T + +I+ Y K AR +FD ++ +++ AM+SGY + + A LF+
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 153 RMRREDGSSTVKFN--FNSVTMLGLVS-GCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
M + V +N + G + L + +P + ++ NS
Sbjct: 134 EMPERN---VVSWNTMIDGYAQSGRIDKALELFDEMP--------------ERNIVSWNS 176
Query: 210 FLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
+ V+ G ++ A LF+ M RD++SW AMV G A+NG L+ M R +
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI--- 233
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
++ A+++ A ++ + + + F S N +I + R + +A +FD
Sbjct: 234 -ISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACGLFD 288
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSH-AGLT 387
M +K+V+SWT A+ +F +M+R G V+P+ +V++LSACS AGL
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 388 D-KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV-KPDGAVWGAL 445
+ + +H ++ K Q S L+++ ++G L A + + V + D W ++
Sbjct: 349 EGQQIH---QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 446 LGACKIH----KNVELAELAFEHVIELEPTNIGYYVLL 479
+ H + +E+ +H +P+ + Y LL
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKH--GFKPSAVTYLNLL 441
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLPL 80
R P +W + + ++ +EAL+++ MLR S +C+ L+ +
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE---THNLPISYNAMISG 137
G Q+H + ++ Q + S+L++MYSK AR++FD IS+N+MI+
Sbjct: 349 EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAV 408
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
Y+ + +A+ ++ +MR+ F ++VT L L+ C+
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHG------FKPSAVTYLNLLFACS 445
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 257/506 (50%), Gaps = 23/506 (4%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+W + LS+ R++KE + +Y M S ++C + + G +HA
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAV 148
++ G Y ++ L+ +YS+ LA++ FD+ +S+N+++ GY + +A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG--------- 199
+F ++ +D S + + + C+L + +P + + G
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL 250
Query: 200 ----LDADLAVMN--SFLTM---YVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
DA + N S++TM Y K G+V+ A +LF M +D + ++AM++ Y QNG
Sbjct: 251 ARTYFDA-MPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGK 309
Query: 251 AARVLELYHEMKLRR--MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
L+L+ +M R + PD +TL +V+S+ + LG G VE I + G + L+
Sbjct: 310 PKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS 369
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
+LI++Y + G+ A+A +F + K VS++A A LF M+ +
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP 429
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
P+ F +LSA SH+GL +G F+ M + + L+P +HY +VD+LGRAGRL+EA +
Sbjct: 430 PNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYE 488
Query: 429 LIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKN 488
LIKSM ++P+ VWGALL A +H NVE E+A H ++LE GY L+ IYS
Sbjct: 489 LIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGR 548
Query: 489 SEGVLRVRVMMRERKLRKDPGCSYVE 514
+ VR ++E+KL K GCS+VE
Sbjct: 549 WDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 129/310 (41%), Gaps = 15/310 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHM-LRSSXXXXXXXXXXXXKSCAILSLPLTG 82
P +WNL + +K+ A SL+ M L+S +C + L T
Sbjct: 197 PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV--NCREMKLARTY 254
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD-ETHNLPISYNAMISGYSLN 141
F Q + + ++IS Y+K A +F + + Y+AMI+ Y+ N
Sbjct: 255 FDAMP-------QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
DA+ LF +M + + +T+ +VS + + GT + G+
Sbjct: 308 GKPKDALKLFAQMLERNSY----IQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 363
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D + S + +Y+K G+ A ++F + +D +S++AM+ G NG A L+ M
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
+++ P+ VT +LS+ ++ G G + ++ + +++M R G L
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRL 483
Query: 322 ARARAVFDGM 331
A + M
Sbjct: 484 EEAYELIKSM 493
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 10/229 (4%)
Query: 234 DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
D SW +V +Q+ +++Y +M + P + +VL +C + V G +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXX 353
+ + G ++ L+ +Y+R G + A+ FD + +K+ VSW +
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 354 XAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCL 413
A +FD++ D + ++S+ + G F M K P ++ L
Sbjct: 188 EARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLK-----SPASWNIL 238
Query: 414 VDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
+ +K A +M K +G W ++ +V+ AE F
Sbjct: 239 IGGYVNCREMKLARTYFDAMPQK-NGVSWITMISGYTKLGDVQSAEELF 286
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 266/600 (44%), Gaps = 79/600 (13%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P T AWN L S+ ++EA++L+ + S +CA L G
Sbjct: 31 PELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGR 90
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET------------------- 124
++ + VIR+G +SLI MY KCS A +VF +
Sbjct: 91 KIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMN 150
Query: 125 ---------------HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNS 169
+ ++N MISG++ +SLF+ M + F +
Sbjct: 151 AEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE------FKPDC 204
Query: 170 VTMLGLVSGCNL-PNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMY-------------- 214
T L++ C+ +++ G +H + G + + NS L+ Y
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 215 -----------------VKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
+K GE E A ++F +++++W M++GY +NG + L
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ EM + D AVL +C+ L G + + CGF ++ NAL+N+YA+
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG++ A F + +K +VSW A++L+D M+ SG++PD F+ +
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGL 444
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS----M 433
L+ CSH+GL ++G F+ M + Y + +H +C++D+ GR G L EA DL + +
Sbjct: 445 LTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLV 504
Query: 434 KVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVL 493
+ + W LLGAC H + EL + + EP+ +VLLSN+Y +
Sbjct: 505 TDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGE 564
Query: 494 RVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPD 553
VR M ER ++K PGCS++E +V F GD +HP+++E+ + L++ E+ P+
Sbjct: 565 DVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQH---EMRNPE 621
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 184/460 (40%), Gaps = 84/460 (18%)
Query: 117 ARRVFDETHNL-PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
AR+VFD L +++N M++ YS + +A++LF ++R D + + +
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP------DDYSFTAI 76
Query: 176 VSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEV--------------- 220
+S C ++ G + + G A L V NS + MY KC +
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 221 ------------------ELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
E A +F EM R +WN M+SG+A G L L+ EM
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML 196
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVV-GVEVERKIEQCGFGS-----NPFLT-------- 308
PD T +++++C+ + VV G V + + G+ S N L+
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 309 ------------------NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
N++I+ + G +A VF +K++V+WT
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+ F EM++SGV D + VL ACS L G +M + G + Y
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMIHGCLIHCGFQGY 371
Query: 411 S----CLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI 466
+ LV+L + G +KEA + K D W +L A +H + A ++++I
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 467 E--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
++P N+ + LL+ EG + M+++ ++
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI 470
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 39/338 (11%)
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
L + S + K G + ARQ+FD M D ++WN M++ Y++ G + L+ +++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
PD + A+LS+CA+LG G +++ + + GF ++ + N+LI+MY +C +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 324 ARAVFDGMV--DKSVVSWTAXXXXXXXXXXXXXAVE------------------------ 357
A VF M ++ V+W + A++
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 358 -------LFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
LF EM+ S +PD F ++++ACS + K G E
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
+ ++ + G +AM ++S++V W +++ AC + E A E V L P
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQ-VSWNSIIDAC---MKIGETEKALE-VFHLAP 298
Query: 471 -TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
NI + + Y + E LR V M + + D
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 229/427 (53%), Gaps = 9/427 (2%)
Query: 92 TGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSL 150
+G QP+ T S++ + RR+F +S +NAM+SGYS + +A+S
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
FR+M+ ++ + T+ ++S C L G +HG + + + +++
Sbjct: 404 FRQMQFQN------LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 211 LTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSP 268
+ +Y +C ++E++ +FD+ + D+ WN+M+SG+ N + L L+ M + + P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+ + VLSSC+ L + + G + + + G+ S+ F+ AL +MY +CG + AR F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
D ++ K+ V W AV L+ +M+ SG +PD FV+VL+ACSH+GL +
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637
Query: 389 KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
GL M+R +G++P +HY C+VD LGRAGRL++A L ++ K +W LL +
Sbjct: 638 TGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Query: 449 CKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDP 508
C++H +V LA E ++ L+P + YVLLSN YS + + ++ +M + ++ K P
Sbjct: 698 CRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTP 757
Query: 509 GCSYVEY 515
G S+ Y
Sbjct: 758 GQSWTTY 764
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 153/316 (48%), Gaps = 10/316 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +AWN L S Y+EA+S +R M + SCA L G
Sbjct: 377 PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN-LPIS-YNAMISGYSLN 141
Q+H VIRT + + S LI++YS+C ++ +FD+ N L I+ +N+MISG+ N
Sbjct: 437 QIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ A+ LFRRM + T N + ++S C+ L G HG V G
Sbjct: 497 MLDTKALILFRRMHQ-----TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+D V + MY KCGE++ ARQ FD +L ++ + WN M+ GY NG + LY +M
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN--ALINMYARCG 319
PD +T ++VL++C++ G G+E+ +++ G P L + +++ R G
Sbjct: 612 ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI-HGIEPELDHYICIVDCLGRAG 670
Query: 320 NLARARAVFDGMVDKS 335
L A + + KS
Sbjct: 671 RLEDAEKLAEATPYKS 686
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 199/458 (43%), Gaps = 59/458 (12%)
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--------------- 124
L+G +H ++R G + D Y + L+ +Y +C AR+VFDE
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 125 -------------HNLP----ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNF 167
+P +S+N MIS A+ +++RM DG +F
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC-DGFLPSRFTL 141
Query: 168 NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCG-EVELARQL 226
SV +S C+ G HG AV GLD ++ V N+ L+MY KCG V+ ++
Sbjct: 142 ASV-----LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRV 196
Query: 227 FDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLS------SC 280
F+ + + +S+ A++ G A+ ++++ M + + D V L +LS C
Sbjct: 197 FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC 256
Query: 281 ANLGAQVVGVEVERKIE----QCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV 336
+L +++ G E+ ++I + GFG + L N+L+ +YA+ ++ A +F M + +V
Sbjct: 257 DSL-SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 337 VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDE 396
VSW +VE M SG +P+ ++VL AC +G + G F
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 397 MERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLGACKIHK 453
+ QP ++ ++ +EA+ + M+ +KPD +L +C +
Sbjct: 376 IP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 454 NVELAELAFEHVIELEPTNIGYYVL-LSNIYSDAKNSE 490
+E + VI E + + V L +YS+ + E
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 162/385 (42%), Gaps = 58/385 (15%)
Query: 18 GEPKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILS 77
G P+R V +WN + L ++ ++AL +Y+ M+ +C+ +
Sbjct: 97 GMPERDVV----SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 152
Query: 78 LPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPF-LARRVFDETHNLP--ISYNAM 134
+ G + H ++TG + + ++L+SMY+KC RVF E+ + P +SY A+
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF-ESLSQPNEVSYTAV 211
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVS------GCNLPNHL--- 185
I G + + +AV +FR M + +SV + ++S GC+ + +
Sbjct: 212 IGGLARENKVLEAVQMFRLMCEKG------VQVDSVCLSNILSISAPREGCDSLSEIYGN 265
Query: 186 PTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGY 245
G +H A+ G DL + NS L +Y K ++ A +F EM +++SWN M+ G+
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 246 AQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
Q + + +E M+ P+ VT ++VL +C
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------------- 360
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
R G++ R +F + SV +W A A+ F +M
Sbjct: 361 ----------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKG 390
++PD+T +LS+C+ + G
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGG 435
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 26/260 (10%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAHV 89
WN + +AL L+R M +++ SC+ L L G Q H V
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAV 148
+++G D + ++L MY KC AR+ FD + +N MI GY N +AV
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 149 SLFRRM----RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG-TCLHGCAVTFGLDAD 203
L+R+M + DG +T + +++ C+ + TG L G++ +
Sbjct: 606 GLYRKMISSGEKPDG----------ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPE 655
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYAQNGH---AARVLELYH 259
L + + G +E A +L + + + W ++S +G A RV E
Sbjct: 656 LDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE--- 712
Query: 260 EMKLRRMSPDPVTLLAVLSS 279
KL R+ P +LS+
Sbjct: 713 --KLMRLDPQSSAAYVLLSN 730
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 267/552 (48%), Gaps = 47/552 (8%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHML-RSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN+ + + ++ +A L+ +++ + CA L+ +G ++H++
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 89 VIRTGSQ-PDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFA 145
++R D ++LIS Y++ A F T ++ IS+NA++ FA
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI-ISWNAILDA------FA 408
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL---DA 202
D+ F+ + +SVT+L L+ C + +HG +V GL +
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE 468
Query: 203 DLAVMNSFLTMYVKCGEVELARQ--------------------------------LFDEM 230
+ + N+ L Y KCG VE A + LF EM
Sbjct: 469 EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 231 LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGV 290
DL +W+ MV YA++ + ++ E++ R M P+ VT++ +L CA L + +
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
+ I + G G + L L+++YA+CG+L A +VF + +V +TA
Sbjct: 589 QCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHG 647
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+ ++ M S ++PD T+L+AC HAGL GL +D + +G++P E Y
Sbjct: 648 RGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQY 707
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEP 470
+C VDL+ R GRL +A + M V+P+ +WG LL AC + ++L H+++ E
Sbjct: 708 ACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAES 767
Query: 471 TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
+ G +VL+SN+Y+ EGV+ +R +M++++++K GCS++E G+ +VF SGD +HP
Sbjct: 768 DDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHP 827
Query: 531 QMKEIYRKVAEL 542
+ I+ V L
Sbjct: 828 RRDSIFDLVNAL 839
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 209/450 (46%), Gaps = 29/450 (6%)
Query: 73 CAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFL-ARRVFDETHNLP-IS 130
C L G +H+++I+ G + D ++L+SMY+K F A FD + +S
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC-NLPNHLP--T 187
+NA+I+G+S N+M ADA F M +E N T+ ++ C ++ ++ +
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEP------NYATIANVLPVCASMDKNIACRS 245
Query: 188 GTCLHGCAVTFG-LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
G +H V L + V NS ++ Y++ G +E A LF M +DL+SWN +++GYA
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 247 QNGHAARVLELYHEMKLR-RMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF-GSN 304
N + +L+H + + +SPD VT++++L CA L G E+ I + + +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
+ NALI+ YAR G+ + A F M K ++SW A + L ++
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPG-------PEHYSCLVDLL 417
+ D +++L C + +G+ E+ Y ++ G P+ + L+D
Sbjct: 426 EAITLDSVTILSLLKFC----INVQGIGKVKEVH-GYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 418 GRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYV 477
+ G ++ A + + + + +LL + + A++ F E+ T++ +
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFT---EMSTTDLTTWS 537
Query: 478 LLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
L+ IY+++ + V ++ R +R +
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPN 567
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 174/393 (44%), Gaps = 30/393 (7%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PI 129
K+CA +S +G LH V + G S+++MY+KC +++F + +L P+
Sbjct: 29 KACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPV 88
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
+N +++G S+ S + + F+ M D +SVT ++ C G
Sbjct: 89 VWNIVLTGLSV-SCGRETMRFFKAMHFADEPKP-----SSVTFAIVLPLCVRLGDSYNGK 142
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEV-ELARQLFDEMLVRDLISWNAMVSGYAQN 248
+H + GL+ D V N+ ++MY K G + A FD + +D++SWNA+++G+++N
Sbjct: 143 SMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSEN 202
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANL--------GAQVVGVEVERKIEQCG 300
A + M P+ T+ VL CA++ G Q+ V+R Q
Sbjct: 203 NMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ-- 260
Query: 301 FGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFD 360
++ F+ N+L++ Y R G + A ++F M K +VSW A +LF
Sbjct: 261 --THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 361 EMVRSG-VRPDRTVFVTVLSACSHAGLTD----KGLHYFDEMERKYGLQPGPEHYSCLVD 415
+V G V PD +++L C A LTD K +H + + R L + L+
Sbjct: 319 NLVHKGDVSPDSVTIISILPVC--AQLTDLASGKEIHSY--ILRHSYLLEDTSVGNALIS 374
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
R G A M K D W A+L A
Sbjct: 375 FYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 207/497 (41%), Gaps = 57/497 (11%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL---TGFQLH 86
+WN + S+ +A + ML+ CA + + +G Q+H
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 87 AHVI-RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMF 144
++V+ R+ Q + +SL+S Y + A +F + +S+N +I+GY+ N +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG-LDAD 203
A LF + + S +SVT++ ++ C L +G +H + L D
Sbjct: 311 FKAFQLFHNLVHKGDVSP-----DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+V N+ ++ Y + G+ A F M +D+ISWNA++ +A + + L L H +
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF---GSNPFLTNALINMYARCGN 320
++ D VT+L++L C N+ EV + G P L NAL++ YA+CGN
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 321 LARARAVFDGMVDK--------------------------------SVVSWTAXXXXXXX 348
+ A +F G+ ++ + +W+
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A+ +F E+ G+RP+ + +L C+ LH + Y ++ G
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLA----SLHLVRQCH-GYIIRGGLG 600
Query: 409 HY---SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV 465
L+D+ + G LK A + +S + D ++ A++ +H + A + + H+
Sbjct: 601 DIRLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Query: 466 IE--LEPTNIGYYVLLS 480
E ++P ++ +L+
Sbjct: 660 TESNIKPDHVFITTMLT 676
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 127/304 (41%), Gaps = 15/304 (4%)
Query: 165 FNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
F + L +V C + L +G LHGC G A V S L MY KC ++ +
Sbjct: 17 FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ 76
Query: 225 QLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL-RRMSPDPVTLLAVLSSCANL 283
++F +M D + WN +++G + + + + M P VT VL C L
Sbjct: 77 KMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRL 135
Query: 284 GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL-ARARAVFDGMVDKSVVSWTAX 342
G G + I + G + + NAL++MYA+ G + A FDG+ DK VVSW A
Sbjct: 136 GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAI 195
Query: 343 XXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH-----AGLTDKGLHYFDEM 397
A F M++ P+ VL C+ A + + +H + +
Sbjct: 196 IAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY-VV 254
Query: 398 ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA----CKIHK 453
+R + LQ + LV R GR++EA L M K D W ++ C+ K
Sbjct: 255 QRSW-LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIAGYASNCEWFK 312
Query: 454 NVEL 457
+L
Sbjct: 313 AFQL 316
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 251/525 (47%), Gaps = 17/525 (3%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAI---LSLPLTGFQLH 86
+WN + + +E L+L M R K+C I G +H
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 87 AHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMF 144
+ + G + D R++L+ MY+K A ++F + N+ ++YNAMISG+
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV-VTYNAMISGFLQMDEI 334
Query: 145 AD-----AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
D A LF M+R G F+ V + C+ L G +H
Sbjct: 335 TDEASSEAFKLFMDMQRR-GLEPSPSTFSVV-----LKACSAAKTLEYGRQIHALICKNN 388
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+D + ++ + +Y G E Q F +D+ SW +M+ + QN +L+
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
++ + P+ T+ ++S+CA+ A G +++ + G + + + I+MYA+ G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
N+ A VF + + V +++A A+ +F+ M G++P++ F+ VL
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
AC H GL +GL YF M+ Y + P +H++CLVDLLGR GRL +A +LI S +
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
W ALL +C+++K+ + + E ++ELEP G YVLL NIY+D+ + VR +M
Sbjct: 629 VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELM 688
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELEN 544
R+R ++K+P S++ + H F D +HP + IY + ++N
Sbjct: 689 RDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMDN 733
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 184/401 (45%), Gaps = 28/401 (6%)
Query: 86 HAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLNSM 143
H H+I++ P Y ++L++MY KC AR++FD N+ IS+N++ISGY+
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNI-ISFNSLISGYTQMGF 128
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
+ A+ LF R + + T G + C L G LHG V GL
Sbjct: 129 YEQAMELFLEAREAN------LKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ 182
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ ++N + MY KCG+++ A LFD RD +SWN+++SGY + G A L L +M
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 264 RRMSPDPVTLLAVLSSCA---NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
++ L +VL +C N G G+ + + G + + AL++MYA+ G+
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 321 LARARAVFDGMVDKSVVSWTAX-----XXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
L A +F M K+VV++ A A +LF +M R G+ P + F
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 376 TVLSACSHAGLTDKGLHYFDEMER---KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
VL ACS A K L Y ++ K Q S L++L G ++ M S
Sbjct: 363 VVLKACSAA----KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 433 MKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNI 473
K D A W +++ H E E AF+ +L ++I
Sbjct: 419 TS-KQDIASWTSMI---DCHVQNEQLESAFDLFRQLFSSHI 455
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 180/394 (45%), Gaps = 23/394 (5%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSL 140
G LH V+ G + + LI MYSKC A +FD +S+N++ISGY
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC-NL-PNHLPTGTCLHGCAVTF 198
+ ++L +M R DG + + SV L + C NL + G +H
Sbjct: 227 VGAAEEPLNLLAKMHR-DGLNLTTYALGSV----LKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ-----NGHAAR 253
G++ D+ V + L MY K G ++ A +LF M ++++++NAM+SG+ Q + ++
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
+L+ +M+ R + P P T VL +C+ G ++ I + F S+ F+ +ALI
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 314 MYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
+YA G+ F + + SWT+ A +LF ++ S +RP+
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 374 FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCL----VDLLGRAGRLKEAMDL 429
++SAC+ G E + Y ++ G + ++ + + + ++G + A +
Sbjct: 462 VSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 430 IKSMKVKPDGAVWGALLGACKIHKNVELAELAFE 463
++ PD A + A++ + H + A FE
Sbjct: 517 FIEVQ-NPDVATYSAMISSLAQHGSANEALNIFE 549
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 248/492 (50%), Gaps = 16/492 (3%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+W + S+ + +AL L++ M R KSC L G Q+H V
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNSMFADAV 148
+ + RS+L+S+Y++C AR FD +S+NAMI GY+ N+ +
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
SLF+ M E G F F S+ +V C L + LHG A+ G A++
Sbjct: 200 SLFQLMLTE-GKKPDCFTFGSLLRASIVVKC-----LEIVSELHGLAIKLGFGRSSALIR 253
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ-NGHAARVLELYHEMKLRRMS 267
S + YVKCG + A +L + RDL+S A+++G++Q N + +++ +M +
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK 313
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVER---KIEQCGFGSNPFLTNALINMYARCGNLARA 324
D V + ++L C + + +G ++ K Q F + L N+LI+MYA+ G + A
Sbjct: 314 MDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF--DVALGNSLIDMYAKSGEIEDA 371
Query: 325 RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHA 384
F+ M +K V SWT+ A++L++ M ++P+ F+++LSACSH
Sbjct: 372 VLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHT 431
Query: 385 GLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK--VKPDGAVW 442
G T+ G +D M K+G++ EH SC++D+L R+G L+EA LI+S + V + W
Sbjct: 432 GQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTW 491
Query: 443 GALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRER 502
GA L AC+ H NV+L+++A ++ +EP Y+ L+++Y+ + L R +M+E
Sbjct: 492 GAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKES 551
Query: 503 -KLRKDPGCSYV 513
K PG S V
Sbjct: 552 GSCNKAPGYSLV 563
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 31/424 (7%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI- 129
K C+ ++ +H + I G + + LI +Y K AR++FD +
Sbjct: 20 KLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+ AMIS +S DA+ LF+ M RED + +F + SV + C L G
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKAN-QFTYGSV-----LKSCKDLGCLKEGM 133
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
+HG +L V ++ L++Y +CG++E AR FD M RDL+SWNAM+ GY N
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSS-----CANLGAQVVGVEVERKIEQCGFGSN 304
A L+ M PD T ++L + C + +++ G+ + + GFG +
Sbjct: 194 CADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI-----KLGFGRS 248
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXX-XXXAVELFDEMV 363
L +L+N Y +CG+LA A + +G + ++S TA A ++F +M+
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 364 RSGVRPDRTVFVTVLSACSHAGLTDKG--LHYF--DEMERKYGLQPGPEHYSCLVDLLGR 419
R + D V ++L C+ G +H F + ++ + G + L+D+ +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG----NSLIDMYAK 364
Query: 420 AGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF---EHVIELEPTNIGYY 476
+G +++A+ + MK K D W +L+ H N E A + EH ++P ++ +
Sbjct: 365 SGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE-RIKPNDVTFL 422
Query: 477 VLLS 480
LLS
Sbjct: 423 SLLS 426
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 259/547 (47%), Gaps = 67/547 (12%)
Query: 20 PKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLP 79
P+R V+ TT + ++ Q+ EA+ L+R M +C+ L
Sbjct: 134 PERSCVSYTTL----IKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGI 189
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISG 137
L + I+ + + ++L+ MY C AR++FDE NL +++N M++G
Sbjct: 190 WDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL-VTWNVMLNG 248
Query: 138 YSLNSMFADAVSLFRRMRREDGSS-------------------------TVKFNFNSVTM 172
YS + A LF ++ +D S + V M
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAVTFGLDA------------------------------ 202
+ L+S G LHG V G D
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 203 -DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+A N+ + +VK G VE AR++FD+ +D+ SWNAM+SGYAQ+ L L+ EM
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 262 -KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
++ PD +T+++V S+ ++LG+ G + N LT A+I+MYA+CG+
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 321 LARARAVF---DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
+ A +F + ++ W A A++L+ ++ ++P+ FV V
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
LSAC HAGL + G YF+ M+ +G++P +HY C+VDLLG+AGRL+EA ++IK M VK
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
D +WG LL A + H NVE+AELA + ++P++ G V+LSN+Y+DA E V VR
Sbjct: 609 DVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVRE 668
Query: 498 MMRERKL 504
MR R +
Sbjct: 669 EMRTRDV 675
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 210/508 (41%), Gaps = 106/508 (20%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--- 128
SCA + G Q+H V+++G + Y +S+++MY+KC L A VF + L
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 129 -----------------------------ISYNAMISGYSLNSMFADAVSLFRRMRREDG 159
+SY +I GY+ N+ +++A+ LFR MR
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR---- 165
Query: 160 SSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGE 219
+ N VT+ ++S C+ + L A+ L+ + V + L MY C
Sbjct: 166 --NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK--------------LRR 265
++ AR+LFDEM R+L++WN M++GY++ G + EL+ ++ LR+
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 266 -----------------MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
M P V ++ +LS+ A G+++ I + GF FL
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 309 -------------------------------NALINMYARCGNLARARAVFDGMVDKSVV 337
NALI + + G + +AR VFD DK +
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 338 SWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLHYFDE 396
SW A A+ LF EM+ S V+PD V+V SA S G ++G D
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 397 MERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV--WGALLGACKIHKN 454
+ + P + ++D+ + G ++ A+++ K + W A++ H +
Sbjct: 464 LNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 455 VELAELAFEHV--IELEPTNIGYYVLLS 480
+LA + + + ++P +I + +LS
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLS 550
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 55/304 (18%)
Query: 161 STVKFNFN---SVTMLGLVSG---CNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMY 214
S F+F+ S T LVS C N + G +H + GLD++ + NS L MY
Sbjct: 27 SRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMY 86
Query: 215 VKC--------------------------GEVELAR-----QLFDEMLVRDLISWNAMVS 243
KC G V R +LFD M R +S+ ++
Sbjct: 87 AKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIK 146
Query: 244 GYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA-----QVVGVEVERKIEQ 298
GYAQN + +EL+ EM+ + + VTL V+S+C++LG + + ++ K+E
Sbjct: 147 GYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLE- 205
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVEL 358
F++ L++MY C L AR +FD M ++++V+W A EL
Sbjct: 206 ----GRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEEL 261
Query: 359 FDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLG 418
FD++ D + T++ C D+ L Y+ EM R G++P +VDLL
Sbjct: 262 FDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR-CGMKPSE---VMMVDLLS 313
Query: 419 RAGR 422
+ R
Sbjct: 314 ASAR 317
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 246/481 (51%), Gaps = 46/481 (9%)
Query: 39 SKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDP 98
++ Y+E+L +R M + K+ L G +H V++ + D
Sbjct: 93 ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 99 YTRSSLISMYSKCSLPFLARRVF-DETHNLPISYNAMISGYSLNSMFADAVSLFRRMRRE 157
+ SSLI MYSK AR+VF D + +NAMISGY+ NS +A++L + M+
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK-- 210
Query: 158 DGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKC 217
G+ D+ N+ ++ +
Sbjct: 211 ---------------------------------------LLGIKPDVITWNALISGFSHM 231
Query: 218 GEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
E ++ + M + D++SW +++SG N + + + +M + P+ T+
Sbjct: 232 RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATI 291
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
+ +L +C L G E+ G + F+ +AL++MY +CG ++ A +F
Sbjct: 292 ITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK 351
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
K+ V++ + AVELFD+M +G + D F +L+ACSHAGLTD G +
Sbjct: 352 KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNL 411
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHK 453
F M+ KY + P EHY+C+VDLLGRAG+L EA ++IK+M+++PD VWGALL AC+ H
Sbjct: 412 FLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Query: 454 NVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYV 513
N+ELA +A +H+ ELEP N G +LL+++Y++A + E V+R++ M+++++ R+ G S+V
Sbjct: 472 NMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWV 531
Query: 514 E 514
E
Sbjct: 532 E 532
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 51/357 (14%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSL 140
G LHAH++ +G + L++ Y +C AR+VFDE IS MI +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N + +++ FR M + DG F S+ L + NL + G +H + F
Sbjct: 95 NGYYQESLDFFREMYK-DGLKLDAFIVPSL----LKASRNLLDR-EFGKMIHCLVLKFSY 148
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
++D +++S + MY K GEV AR++F ++ +DL+ +NAM+SGYA N A L L +
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
MKL + PD +T NALI+ ++ N
Sbjct: 209 MKLLGIKPDVITW-----------------------------------NALISGFSHMRN 233
Query: 321 LARARAVFDGMV----DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
+ + + M VVSWT+ A + F +M+ G+ P+ +T
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 377 VLSACSHAGLTDKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
+L AC+ G +H + + GL+ S L+D+ G+ G + EAM L +
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVT---GLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
G LH VT G+ + +T YV+CG+V AR++FDEM RD+ M+ A+
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFL 307
NG+ L+ + EM + D + ++L + NL + G + + + + S+ F+
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
++LI+MY++ G + AR VF + ++ +V + A A+ L +M G+
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
+PD + ++S SH +K + M G +P ++ ++ L + ++A
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 428 DLIKSM---KVKPDGAVWGALLGAC 449
D K M + P+ A LL AC
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPAC 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 40/258 (15%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
+W + L Q ++A ++ ML +C L+ G ++H
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG 312
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFAD 146
+ + TG + + RS+L+ MY KC A +F +T +++N+MI Y+ + +
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
AV LF +M +G L +HL L C+ GL DL
Sbjct: 373 AVELFDQME--------------------ATGEKL-DHLTFTAILTACSHA-GL-TDLG- 408
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
N FL M K + +L + DL+ G A +++E Y +K RM
Sbjct: 409 QNLFLLMQNK---YRIVPRLEHYACMVDLL------------GRAGKLVEAYEMIKAMRM 453
Query: 267 SPDPVTLLAVLSSCANLG 284
PD A+L++C N G
Sbjct: 454 EPDLFVWGALLAACRNHG 471
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 248/480 (51%), Gaps = 30/480 (6%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
E+L ++R ML +S SC+ ++ G Q+H I+TG + ++ +
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATM 330
Query: 106 SMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
+MYS A +VF+ E +L +++N MIS Y+ + A+S+++RM G
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDL-VTWNTMISSYNQAKLGKSAMSVYKRMHI-IGVKPD 388
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
+F F S+ L L + C + FGL + + + N+ ++ Y K G++E A
Sbjct: 389 EFTFGSLLATSL--------DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 224 RQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH---EMKLRRMSPDPVTLLAVLSSC 280
LF+ L ++LISWNA++SG+ NG LE + E ++R + PD TL +LS C
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL-PDAYTLSTLLSIC 499
Query: 281 ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWT 340
+ + ++G + + + G + NALINMY++CG + + VF+ M +K VVSW
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWN 559
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
+ AV + M G V PD F VLSACSHAGL ++GL F+ M
Sbjct: 560 SLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Query: 400 KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA---VWGALLGACKIHKNVE 456
+G+ +H+SCLVDLLGRAG L EA L+K + K G+ VW AL AC H +++
Sbjct: 620 FHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAAHGDLK 678
Query: 457 LAELAFEHVIELEPTNIGYYVLLSNIYSDA---KNSEGVLRVRVMMRERKLRKDPGCSYV 513
L ++ + ++E E + YV LSNIY+ A K +E R M+ K R GCS++
Sbjct: 679 LGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQR---GCSWM 735
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 200/462 (43%), Gaps = 60/462 (12%)
Query: 26 NPTTAWNL--RLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAI-LSLPLTG 82
N TT NL RL L++ + + AL L+ + R + + A L + G
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 83 FQLHAHVIRTG-------------------------------SQPDPYTRSSLISMYSKC 111
Q+H + IR+G +PD Y+ ++L+S K
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 112 SLPFLARRVFD---ETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFN 168
A VFD E ++ I +NAMI+G + +V LFR M + G KF F
Sbjct: 137 GDIEYAFEVFDKMPERDDVAI-WNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGFA 194
Query: 169 SVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFD 228
++ +S C+ + L G +H + G +V+N+ +TMY C V A +F+
Sbjct: 195 TI-----LSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE 248
Query: 229 E--MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLS--SCANLG 284
E + VRD +++N ++ G A +L ++ +M + P +T ++V+ SCA +G
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMG 307
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXX 344
QV G+ + + G+ ++NA + MY+ + A VF+ + +K +V+W
Sbjct: 308 HQVHGLAI-----KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMIS 362
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A+ ++ M GV+PD F ++L+ L L K+GL
Sbjct: 363 SYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLS 418
Query: 405 PGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
E + L+ + G++++A DL+ ++ + W A++
Sbjct: 419 SKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 146/302 (48%), Gaps = 14/302 (4%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQL-HAHV 89
WN + ++ + K A+S+Y+ M S SL L ++ A +
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRM----HIIGVKPDEFTFGSLLATSLDLDVLEMVQACI 412
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLNSMFADA 147
I+ G ++LIS YSK A +F+ + NL IS+NA+ISG+ N +
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL-ISWNAIISGFYHNGFPFEG 471
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ F + S V+ ++ T+ L+S C + L G+ H + G + +
Sbjct: 472 LERFSCLLE----SEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG 527
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR-RM 266
N+ + MY +CG ++ + ++F++M +D++SWN+++S Y+++G + Y M+ ++
Sbjct: 528 NALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKV 587
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEV-ERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
PD T AVLS+C++ G G+E+ +E G N + L+++ R G+L A
Sbjct: 588 IPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAE 647
Query: 326 AV 327
++
Sbjct: 648 SL 649
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 139/326 (42%), Gaps = 11/326 (3%)
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
L++ N ++G ++G L+L+ ++ + + PD ++ +++ +L + G +V
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXX 353
+ G + ++N L+++Y R GNLA + FD + + V SWT
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 354 XAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCL 413
A E+FD+M R D ++ +++ C +G + + F EM K G++ ++ +
Sbjct: 141 YAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREM-HKLGVRHDKFGFATI 196
Query: 414 VDL--LGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPT 471
+ + G K+ L+ +V AL+ + V A L FE
Sbjct: 197 LSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 472 NIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP- 530
+ + V++ + + K E +L R M+ E LR ++V G G + H
Sbjct: 257 QVTFNVVIDGL-AGFKRDESLLVFRKML-EASLRP-TDLTFVSVMGSCSCAAMGHQVHGL 313
Query: 531 QMKEIYRKVAELENSVMEIHRPDEKY 556
+K Y K + N+ M ++ E +
Sbjct: 314 AIKTGYEKYTLVSNATMTMYSSFEDF 339
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 208/387 (53%), Gaps = 10/387 (2%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
S+N +I +S + + ++ LF RM RE F T+ ++ C+ +G
Sbjct: 99 FSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDF-----TLPLILRACSASREAKSG 153
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+H + G + L V ++ + MYV G++ AR+LFD+M VRD + + AM GY Q
Sbjct: 154 DLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQ 213
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK-IEQCG-FGSNPF 306
G A L ++ EM + D V ++++L +C LGA G V I +C G N
Sbjct: 214 GEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN-- 271
Query: 307 LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
L NA+ +MY +C L A VF M + V+SW++ + +LFDEM++ G
Sbjct: 272 LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG 331
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
+ P+ F+ VLSAC+H GL +K YF M+ +Y + P +HY+ + D + RAG L+EA
Sbjct: 332 IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEEA 390
Query: 427 MDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDA 486
++ M VKPD AV GA+L CK++ NVE+ E +I+L+P YYV L+ +YS A
Sbjct: 391 EKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAA 450
Query: 487 KNSEGVLRVRVMMRERKLRKDPGCSYV 513
+ +R M+E+++ K PGCS +
Sbjct: 451 GRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 175/426 (41%), Gaps = 52/426 (12%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXX-XXXKSCAILSLPLTG 82
P +WN+ + E S+ +++ L+ M R S ++C+ +G
Sbjct: 94 PYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSG 153
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS----YNAMISGY 138
+H ++ G + S+L+ MY AR++FD+ +P+ Y AM GY
Sbjct: 154 DLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDD---MPVRDSVLYTAMFGGY 210
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+++FR M G S F +SV M+ L+ C L G +HG +
Sbjct: 211 VQQGEAMLGLAMFREM----GYS--GFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY 258
L + N+ MYVKC ++ A +F M RD+ISW++++ GY +G +L+
Sbjct: 265 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
EM + P+ VT L VLS+CA+ G VE+ +L L+ Y
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGL------VEKS----------WLYFRLMQEYNIV 368
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
L +V D M ++ A + ++M V+PD V VL
Sbjct: 369 PELKHYASVADCMSRAGLLE---------------EAEKFLEDM---PVKPDEAVMGAVL 410
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQP-GPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
S C G + G E+ + L+P +Y L L AGR EA L + MK K
Sbjct: 411 SGCKVYGNVEVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQ 467
Query: 438 DGAVWG 443
V G
Sbjct: 468 ISKVPG 473
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 205/421 (48%), Gaps = 38/421 (9%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
IS +S Y+ A++LF +M S+ ++ + C G
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMH-----SSFALPLDAHVFSLALKSCAAAFRPVLG 67
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+H +V ++ V + L MY KC V AR+LFDE+ R+ + WNAM+S Y
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 249 GHAARVLELYHEMKLR---------------------------------RMSPDPVTLLA 275
G +ELY M + R P+ +TLLA
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
++S+C+ +GA + E+ + +P L + L+ Y RCG++ + VFD M D+
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
VV+W++ A++ F EM + V PD F+ VL ACSHAGL D+ L YF
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNV 455
M+ YGL+ +HYSCLVD+L R GR +EA +I++M KP WGALLGAC+ + +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 456 ELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEY 515
ELAE+A ++ +EP N YVLL IY E R+R+ M+E ++ PG S+ +
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCLF 427
Query: 516 K 516
K
Sbjct: 428 K 428
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 31/339 (9%)
Query: 34 RLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRT 92
+L + Q +++AL+L+ M S + KSCA P+ G +HAH +++
Sbjct: 18 QLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKS 77
Query: 93 GSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLF 151
+P+ +L+ MY KC AR++FDE + +NAMIS Y+ +AV L+
Sbjct: 78 NFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELY 137
Query: 152 RRMR-----------------REDGS--------STVKFNF--NSVTMLGLVSGCNLPNH 184
M EDGS ++F F N +T+L LVS C+
Sbjct: 138 EAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 185 LPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSG 244
+H A ++ + + + Y +CG + + +FD M RD+++W++++S
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISA 257
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG-AQVVGVEVERKIEQCGFGS 303
YA +G A L+ + EM+L +++PD + L VL +C++ G A V +R G +
Sbjct: 258 YALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRA 317
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDK-SVVSWTA 341
+ + L+++ +R G A V M +K + +W A
Sbjct: 318 SKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGA 356
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 127/309 (41%), Gaps = 42/309 (13%)
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP-DPVTLLAVLSSCANLGAQVVGVEVE 293
LIS +S YA G+ + L L+ +M P D L SCA V+G V
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXX 353
+ F SNPF+ AL++MY +C +++ AR +FD + ++ V W A
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 354 XAVELFD---------------------------------EMVRSGVRPDRTVFVTVLSA 380
AVEL++ +M+ +P+ + ++SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 381 CSHAGLTD--KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
CS G K +H + + ++P P+ S LV+ GR G + + SM+ + D
Sbjct: 192 CSAIGAFRLIKEIHSY---AFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR-D 247
Query: 439 GAVWGALLGACKIHKNVELAELAFE--HVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVR 496
W +L+ A +H + E A F+ + ++ P +I + +L E ++ +
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 497 VMMRERKLR 505
M + LR
Sbjct: 308 RMQGDYGLR 316
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 243/496 (48%), Gaps = 12/496 (2%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P +WN L+ + AL M R K+C+ L
Sbjct: 198 RMPQPNVVSWNC-LISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH---NLPIS-YNAMISG 137
G QLH V+++G + P+ S+LI MYS C A VF + N ++ +N+M+SG
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 138 YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT 197
+ +N A+ L ++ + D F+S T+ G + C +L G +H V
Sbjct: 317 FLINEENEAALWLLLQIYQSD------LCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
G + D V + + ++ G ++ A +LF + +D+I+++ ++ G ++G + L
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ E+ + D + +L C++L + G ++ + G+ S P AL++MY +
Sbjct: 431 FRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVK 490
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CG + +FDGM+++ VVSWT A F +M+ G+ P++ F+ +
Sbjct: 491 CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGL 550
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
LSAC H+GL ++ + M+ +YGL+P EHY C+VDLLG+AG +EA +LI M ++P
Sbjct: 551 LSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEP 610
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRV 497
D +W +LL AC HKN L + E +++ P + Y LSN Y+ + + +VR
Sbjct: 611 DKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 498 MMRERKLRKDPGCSYV 513
++ K+ G S++
Sbjct: 671 AAKKLG-AKESGMSWI 685
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 177/426 (41%), Gaps = 51/426 (11%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSL 140
G + AHVI+ G + + +++ISMY L A +VFDE I ++ M+SGY+
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ A+ L+RRM + + +F +++V + C L + G ++ L
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAV-----LKACGLVGDIQLGILVYERIGKENL 138
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D+ +MNS + MYVK G + A F E+L SWN ++SGY + G + L+H
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 261 MK--------------LRRMSP----------------DPVTLLAVLSSCANLGAQVVGV 290
M + + SP D L L +C+ G +G
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDG---MVDKSVVSWTAXXXXXX 347
++ + + G S+PF +ALI+MY+ CG+L A VF V+ SV W +
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH-----AGLTDKGLHYFDEMERKYG 402
A+ L ++ +S + D L C + GL L E Y
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 403 LQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
+ S LVDL G +++A L + K A G + G K N LA F
Sbjct: 379 VG------SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN-SLAFYLF 431
Query: 463 EHVIEL 468
+I+L
Sbjct: 432 RELIKL 437
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 126/315 (40%), Gaps = 38/315 (12%)
Query: 179 CNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISW 238
C G + + G+ ++ + N+ ++MYV + A ++FDEM R++++W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 239 NAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE 297
MVSGY +G + +ELY M + + AVL +C +G +G+ V +I
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 298 QCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVE 357
+ + L N++++MY + G L A + F ++ S SW AV
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 358 LFD------------------------------EMVRSGVRPDRTVFVTVLSACSHAGLT 387
LF M R G+ D L ACS GL
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 388 DKG--LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI--KSMKVKPDGAVWG 443
G LH K GL+ P S L+D+ G L A D+ + + V AVW
Sbjct: 255 TMGKQLHC---CVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 444 ALLGACKIHKNVELA 458
++L I++ E A
Sbjct: 312 SMLSGFLINEENEAA 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
M D + A L C + A G ++ + + G N F+ N +I+MY L+ A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR-PDRTVFVTVLSACSHA 384
VFD M ++++V+WT A+EL+ M+ S + ++ VL AC
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 385 GLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGA 444
G G+ ++ + ++ L+ + +VD+ + GRL EA K + ++P W
Sbjct: 121 GDIQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNT 178
Query: 445 LL-GACK 450
L+ G CK
Sbjct: 179 LISGYCK 185
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 197/350 (56%), Gaps = 5/350 (1%)
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM- 261
+L NS L Y K G+V AR +FDEM RD+++W++M+ GY + G + LE++ +M
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
++ + VT+++V+ +CA+LGA G V R I L +LI+MYA+CG++
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSI 292
Query: 322 ARARAVF--DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
A +VF + + + W A +++LF +M S + PD F+ +L+
Sbjct: 293 GDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG 439
ACSH GL + H+F + ++ G +P EHY+C+VD+L RAG +K+A D I M +KP G
Sbjct: 353 ACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTG 411
Query: 440 AVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMM 499
++ GALL C H N+ELAE + +IEL+P N G YV L+N+Y+ K +R M
Sbjct: 412 SMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAM 471
Query: 500 RERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI 549
++ ++K G S ++ G H F + D+ H +IY V +L + M +
Sbjct: 472 EKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIY-AVLQLTGAWMNL 520
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 27 PTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLH 86
P WN + S R ++++S+Y MLR KS + LS G LH
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 87 AHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNL----------------- 127
V+++G + D + ++LI MY AR++FDE NL
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 128 -------------PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLG 174
+++++MI GY + A+ +F +M R GSS N VTM+
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM-GSSKA----NEVTMVS 246
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR- 233
++ C L G +H + L + + S + MY KCG + A +F V+
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 234 -DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
D + WNA++ G A +G L+L+H+M+ ++ PD +T L +L++C++ G
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 144/332 (43%), Gaps = 48/332 (14%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYV--KCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+H +T GL + ++ L+ G+V+ A + ++ WN ++ G++ +
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 86
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
+ + + +Y +M + PD +T ++ S + L + +G + + + G + F+
Sbjct: 87 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFIC 146
Query: 309 NALINM-------------------------------YARCGNLARARAVFDGMVDKSVV 337
N LI+M YA+ G++ AR VFD M ++ VV
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 338 SWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKG--LHYF 394
+W++ A+E+FD+M+R G + + V+V+ AC+H G ++G +H +
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 395 D---EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK-PDGAVWGALLGACK 450
+ LQ + L+D+ + G + +A + VK D +W A++G
Sbjct: 267 ILDVHLPLTVILQ------TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 451 IHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
H + + F + E ++P I + LL+
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 228/465 (49%), Gaps = 42/465 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNS 142
++HAH++R + IS+ S A RVF N + +NAMI YSL
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL-- 200
+++S F M+ + + T L+ C+ + L G C+HG + G
Sbjct: 82 PPLESLSFFSSMKSRGIWA------DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHR 135
Query: 201 -----------------------------DADLAVMNSFLTMYVKCGEVELARQLFDEML 231
+ ++ V N + + G+VE LF +M
Sbjct: 136 LGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMS 195
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
R ++SWN+M+S ++ G LEL+ EM + PD T++ VL A+LG G
Sbjct: 196 ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKW 255
Query: 292 VERKIEQCGFGSNPFLT--NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
+ E G + F+T NAL++ Y + G+L A A+F M ++VVSW
Sbjct: 256 IHSTAESSGLFKD-FITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVN 314
Query: 350 XXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
++LFD M+ G V P+ F+ VL+ CS+ G ++G F M ++ L+ E
Sbjct: 315 GKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTE 374
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIEL 468
HY +VDL+ R+GR+ EA +K+M V + A+WG+LL AC+ H +V+LAE+A ++++
Sbjct: 375 HYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKI 434
Query: 469 EPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYV 513
EP N G YVLLSN+Y++ + V +VR +M++ +LRK G S +
Sbjct: 435 EPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 141/337 (41%), Gaps = 56/337 (16%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
E+LS + M KSC+ LS G +H +IRTG R ++
Sbjct: 85 ESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVV 144
Query: 106 SMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVK 164
+Y+ A++VFDE + + +N MI G+ + + LF++M S V
Sbjct: 145 ELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER---SIVS 201
Query: 165 FNFNSVTMLGLVSGCN---------------------------LP-----NHLPTGTCLH 192
+N +M+ +S C LP L TG +H
Sbjct: 202 WN----SMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH 257
Query: 193 GCAVTFGLDAD-LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
A + GL D + V N+ + Y K G++E A +F +M R+++SWN ++SG A NG
Sbjct: 258 STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 252 ARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT-- 308
++L+ M + +++P+ T L VL+ C+ G +VER E G F
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG------QVERGEELFGLMMERFKLEA 371
Query: 309 -----NALINMYARCGNLARARAVFDGM-VDKSVVSW 339
A++++ +R G + A M V+ + W
Sbjct: 372 RTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMW 408
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 127/327 (38%), Gaps = 35/327 (10%)
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
+L L+ G N LP +H + L ++ F+++ + A ++F +
Sbjct: 7 LLRLLHGHNTRTRLPE---IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQ 63
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
+++ +NAM+ Y+ G L + MK R + D T +L SC++L G
Sbjct: 64 NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKC 123
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV------------------- 332
V ++ + GF + ++ +Y G + A+ VFD M
Sbjct: 124 VHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGD 183
Query: 333 ------------DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
++S+VSW + A+ELF EM+ G PD VTVL
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
+ G+ D G E + + LVD ++G L+ A + + M+ + +
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVV 302
Query: 441 VWGALLGACKIHKNVELAELAFEHVIE 467
W L+ ++ E F+ +IE
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIE 329
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 254/507 (50%), Gaps = 11/507 (2%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
AWN ++ K + ++ L +R+ML S C+ L G +HA +
Sbjct: 267 AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--ISYNAMISGYSLNSMFADA 147
I + S D ++L+ MY C A VF HN P +S+N++ISG S N A
Sbjct: 327 IVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN-PNLVSWNSIISGCSENGFGEQA 385
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ ++RR+ R ++ F++ +S P G LHG G + + V
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAA-----ISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
+ L+MY K E E A+++FD M RD++ W M+ G+++ G++ ++ + EM +
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
D +L +V+ +C+++ G + GF + AL++MY + G A +
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETI 560
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
F + + W + A+ F++++ +G PD ++++L+ACSH G T
Sbjct: 561 FSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGST 620
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA-VWGALL 446
+G +++M+ + G++ G +HYSC+V+L+ +AG + EA++LI+ + A +W LL
Sbjct: 621 LQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLL 679
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
AC +N+++ A E +++L+P + ++LLSN+Y+ E V +R +R K
Sbjct: 680 SACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSK 739
Query: 507 DPGCSYVEY-KGKVHVFYSGDRNHPQM 532
DPG S++E VF SGD+++P++
Sbjct: 740 DPGLSWIEVNNNNTQVFSSGDQSNPEV 766
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 16/414 (3%)
Query: 73 CAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISY 131
CA+L L G L++ +I+ G + ++S++ MYS C ARR+FD +N +++
Sbjct: 209 CAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAW 268
Query: 132 NAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL 191
N MI G N D + FR M G +F ++ V ++GC+ G +
Sbjct: 269 NTMIVGSLKNDKIEDGLMFFRNMLMS-GVDPTQFTYSIV-----LNGCSKLGSYSLGKLI 322
Query: 192 HGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
H + ADL + N+ L MY CG++ A +F + +L+SWN+++SG ++NG
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 252 ARVLELYHEMKLRRMS---PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
+ + +Y +L RMS PD T A +S+ A V G + ++ + G+ + F+
Sbjct: 383 EQAMLMYR--RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
L++MY + A+ VFD M ++ VV WT AV+ F EM R R
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
D +V+ ACS + +G F + + G LVD+ G+ G+ + A +
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-E 558
Query: 429 LIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS 480
I S+ PD W ++LGA H VE A FE ++E P + Y LL+
Sbjct: 559 TIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 153/319 (47%), Gaps = 12/319 (3%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGS---QPDPYTRSSLISMYSKCSLPFLARRVFDET-HN 126
+ C +++ Q+HA V+ G+ PY ++LISMY +C AR+VFD+ H
Sbjct: 102 RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHR 161
Query: 127 LPISYNAMISGYSLNSMFAD-AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHL 185
+SYNA+ S YS N FA A L M E NS T LV C + +
Sbjct: 162 NVVSYNALYSAYSRNPDFASYAFPLTTHMAFE------YVKPNSSTFTSLVQVCAVLEDV 215
Query: 186 PTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGY 245
G+ L+ + G ++ V S L MY CG++E AR++FD + RD ++WN M+ G
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGS 275
Query: 246 AQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+N L + M + + P T VL+ C+ LG+ +G + +I ++
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR- 364
L NAL++MY CG++ A VF + + ++VSW + A+ ++ ++R
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 365 SGVRPDRTVFVTVLSACSH 383
S RPD F +SA +
Sbjct: 396 STPRPDEYTFSAAISATAE 414
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 185/401 (46%), Gaps = 19/401 (4%)
Query: 98 PYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRRE 157
PY ++LISMY +CS AR+VFD+ I ++ + L+++F + VS+ + +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNI-----VTLFGLSAVF-EYVSMGSSLHSQ 75
Query: 158 D---GSSTVKF----NFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA---VM 207
GS + F N + +++ L C L +H +T G A
Sbjct: 76 IIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYAN 135
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN-GHAARVLELYHEMKLRRM 266
N+ ++MYV+CG +E AR++FD+M R+++S+NA+ S Y++N A+ L M +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
P+ T +++ CA L ++G + +I + G+ N + +++ MY+ CG+L AR
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+FD + ++ V+W + F M+ SGV P + + VL+ CS G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
G + L P + L+D+ G ++EA + + P+ W +++
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLD-NALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSII 373
Query: 447 GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
C + E A L + ++ + Y + I + A+
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 137/297 (46%), Gaps = 9/297 (3%)
Query: 26 NPT-TAWNLRLMELSKQRQYKEALSLYRHMLR-SSXXXXXXXXXXXXKSCAILSLPLTGF 83
NP +WN + S+ ++A+ +YR +LR S+ + A + G
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
LH V + G + + ++L+SMY K A++VFD + + MI G+S
Sbjct: 423 LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLG 482
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
AV F M RE S F+ +SV + C+ L G H A+ G D
Sbjct: 483 NSELAVQFFIEMYREKNRSD-GFSLSSV-----IGACSDMAMLRQGEVFHCLAIRTGFDC 536
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
++V + + MY K G+ E A +F DL WN+M+ Y+Q+G + L + ++
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
PD VT L++L++C++ G+ + G + ++++ G + + ++N+ ++ G
Sbjct: 597 ENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAG 653
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 238/465 (51%), Gaps = 49/465 (10%)
Query: 117 ARRVFDETHNLP-ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGL 175
A +VFDE L IS A+I + S +A F+R+ G +F F +V
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL-GIRPNEFTFGTV----- 99
Query: 176 VSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDE------ 229
+ + G LH A+ GL +++ V ++ L YVK + AR+ FD+
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 230 -------------------------MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLR 264
M R +++WNA++ G++Q G + + +M LR
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM-LR 218
Query: 265 R--MSPDPVTLLAVLSSCANLGAQVVGVEVER-KIEQCGFGSNPFLTNALINMYARCGNL 321
+ P+ T +++ +N+ + G + I+ G N F+ N+LI+ Y++CGN+
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 322 ARARAVFDGMVD--KSVVSWTAXXXXXXXXXXXXXAVELFDEMVR-SGVRPDRTVFVTVL 378
+ F+ + + +++VSW + AV +F++MV+ + +RP+ + VL
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGP---EHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
AC+HAGL +G YF++ Y P EHY+C+VD+L R+GR KEA +LIKSM +
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPL 397
Query: 436 KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRV 495
P W ALLG C+IH N LA+LA ++EL+P ++ YV+LSN YS +N + V +
Sbjct: 398 DPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLI 457
Query: 496 RVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVA 540
R M+E L++ GCS++E + ++ VF + D+N+ E+YR +A
Sbjct: 458 RRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLA 502
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 14/302 (4%)
Query: 211 LTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDP 270
L ++ + A ++FDE+ D+IS A++ + + + + + + P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 271 VTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDG 330
T V+ S +G ++ + G SN F+ +A++N Y + L AR FD
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 331 MVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV--TVLSACSHAGLTD 388
D +VVS T A+ LF M P+R+V V+ S G +
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAM------PERSVVTWNAVIGGFSQTGRNE 207
Query: 389 KGLHYFDEMERKYGLQPGPEHYSCLVDLLGR-----AGRLKEAMDLIKSMKVKPDGAVWG 443
+ ++ F +M R+ + P + C + + AG+ A IK + + + VW
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC-AIKFLGKRFNVFVWN 266
Query: 444 ALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERK 503
+L+ N+E + LAF + E + + + ++ + + E V M+++
Sbjct: 267 SLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTN 326
Query: 504 LR 505
LR
Sbjct: 327 LR 328
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 25/292 (8%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL--- 80
P WN + S+ + +EA++ + MLR CAI ++
Sbjct: 186 PERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTF----PCAITAISNIAS 241
Query: 81 --TGFQLHAHVIR-TGSQPDPYTRSSLISMYSKCSL---PFLARRVFDETHNLPISYNAM 134
G +HA I+ G + + + +SLIS YSKC LA +E +S+N+M
Sbjct: 242 HGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSM 301
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
I GY+ N +AV++F +M ++ N+VT+LG++ CN + G
Sbjct: 302 IWGYAHNGRGEEAVAMFEKMVKD-----TNLRPNNVTILGVLFACNHAGLIQEGYMYFNK 356
Query: 195 AVTFGLDADLAVMNSF---LTMYVKCGEVELARQLFDEMLVRDLIS-WNAMVSGYAQNGH 250
AV D +L + + + M + G + A +L M + I W A++ G H
Sbjct: 357 AVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQI--H 414
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE-VERKIEQCGF 301
+ + L K+ + P V+ +LS+ + V + RK+++ G
Sbjct: 415 SNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGL 466
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 193/361 (53%), Gaps = 40/361 (11%)
Query: 191 LHGCAVTFGLDADLAVMNSFLTMY-------------------------------VKCGE 219
LH A+ FGL +DL +N+ + +Y VK E
Sbjct: 139 LHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKARE 198
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+ AR+LFD M +RDL+SWN+++SGYAQ H ++L+ EM + PD V +++ LS+
Sbjct: 199 IVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSA 258
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSW 339
CA G G + ++ + FL L++ YA+CG + A +F+ DK++ +W
Sbjct: 259 CAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTW 318
Query: 340 TAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
A V+ F +MV SG++PD F++VL CSH+GL D+ + FD+M
Sbjct: 319 NAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRS 378
Query: 400 KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA------VWGALLGACKIHK 453
Y + +HY C+ DLLGRAG ++EA ++I+ M DG W LLG C+IH
Sbjct: 379 LYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM--PKDGGNREKLLAWSGLLGGCRIHG 436
Query: 454 NVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVR-VMMRERKLRKDPGCSY 512
N+E+AE A V L P + G Y ++ +Y++A+ E V++VR ++ R++K++K+ G S
Sbjct: 437 NIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSK 496
Query: 513 V 513
V
Sbjct: 497 V 497
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 38/232 (16%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-------THNLPI-------- 129
LH +R G D +T ++LI +YS + A ++FDE T+N+ I
Sbjct: 139 LHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKARE 198
Query: 130 -----------------SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTM 172
S+N++ISGY+ + +A+ LF M + ++V +
Sbjct: 199 IVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM------VALGLKPDNVAI 252
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV 232
+ +S C G +H L D + + Y KCG ++ A ++F+
Sbjct: 253 VSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD 312
Query: 233 RDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
+ L +WNAM++G A +G+ ++ + +M + PD VT ++VL C++ G
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 270/535 (50%), Gaps = 36/535 (6%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXX-XXXXXXXXXKSCAILSLPLTGFQLHAH 88
+W++ + + ++ L L++ M+ + K+C ++ G +H
Sbjct: 192 SWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGF 251
Query: 89 VIRTG-SQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLNSMFA 145
IR G D + +SLI MYSK A RVFDET N+ +S+N++++G+ N +
Sbjct: 252 SIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI-VSWNSILAGFVHNQRYD 310
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
+A+ +F M +E + VT++ L+ C +HG + G +++
Sbjct: 311 EALEMFHLMVQE------AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
++S + Y C V+ A + D M +D++S + M+SG A G + + ++ M R
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---R 421
Query: 266 MSPDPVTLLAVLSSC---ANL--GAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
+P+ +T++++L++C A+L G+ + R + ++ + ++++ YA+CG
Sbjct: 422 DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI----NDISVGTSIVDAYAKCGA 477
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+ AR FD + +K+++SWT A+ LFDEM + G P+ ++ LSA
Sbjct: 478 IEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSA 537
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM--KVKPD 438
C+H GL KGL F M + +P +HYSC+VD+L RAG + A++LIK++ VK
Sbjct: 538 CNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAG 596
Query: 439 GAVWGALLGAC--KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVR 496
+ WGA+L C + K + +E+ E V+ELEP Y+L S+ ++ K+ E V +R
Sbjct: 597 ASAWGAILSGCRNRFKKLIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMR 655
Query: 497 VMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHR 551
+++ERK+R G S V F +GD+ + + +EL + V +HR
Sbjct: 656 RLVKERKVRVVAGYSMVREGNLAKRFLAGDK-------LSQSDSELNDVVQSLHR 703
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 11/311 (3%)
Query: 74 AILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYN 132
A SL G ++H +VIR+G ++S++ MY+ S AR++FDE + IS++
Sbjct: 136 ACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWS 194
Query: 133 AMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLH 192
+I Y + + LF+ M E K + VT+ ++ C + + G +H
Sbjct: 195 VVIRSYVQSKEPVVGLKLFKEMVHE-----AKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 193 GCAVTFGLD-ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHA 251
G ++ G D AD+ V NS + MY K +V+ A ++FDE R+++SWN++++G+ N
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRY 309
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
LE++H M + D VT++++L C + + I + G+ SN ++L
Sbjct: 310 DEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSL 369
Query: 312 INMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
I+ Y C + A V D M K VVS + A+ +F M + P+
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNA 426
Query: 372 TVFVTVLSACS 382
+++L+ACS
Sbjct: 427 ITVISLLNACS 437
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
NS Y+KCG++ + FD M RD +SWN +V G G L + ++++
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
P+ TL+ V+ +C +L G ++ + + GF + N+++ MYA +L+ AR +
Sbjct: 125 PNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV-RSGVRPDRTVFVTVLSACSHAGL 386
FD M ++ V+SW+ ++LF EMV + PD +VL AC+
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 387 TDKG--LHYFDEMERKYGLQPGPEHYSC--LVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
D G +H F + R + L + + C L+D+ + + A + + + W
Sbjct: 242 IDVGRSVHGF-SIRRGFDL---ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSW 296
Query: 443 GALLGAC----KIHKNVELAELAFEHVIELEPTNI 473
++L + + +E+ L + +E++ +
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTV 331
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 197/356 (55%), Gaps = 15/356 (4%)
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-DLISWNAMVSGYA 246
G +H G +A + + S + Y G+V+ ARQ+FDE + +++ W AM+S Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEV-ERKIEQCG-FGSN 304
+N ++ +EL+ M+ ++ D V + LS+CA+LGA +G E+ R I++ +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELF----- 359
L N+L+NMY + G +AR +FD + K V ++T+ ++ELF
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 360 -DEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLG 418
D+ + + P+ F+ VL ACSH+GL ++G +F M Y L+P H+ C+VDL
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 419 RAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVL 478
R+G LK+A + I M +KP+ +W LLGAC +H NVEL E + EL+ ++G YV
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 479 LSNIYSDAKNSEGVLRVRVMMRER-KLRKDPGCSYVEYKGKVHVFYSG-DRNHPQM 532
LSNIY+ S+G+ + MR+R + R+ PG S++E ++ F SG D N Q+
Sbjct: 384 LSNIYA----SKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEFVSGPDNNDEQL 435
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 139/288 (48%), Gaps = 34/288 (11%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET---HNLP 128
S A + L G Q+HA V + G ++SL+ YS AR+VFDET N+
Sbjct: 74 SSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIV 133
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
+ + AMIS Y+ N +A+ LF+RM E K + V + +S C + G
Sbjct: 134 L-WTAMISAYTENENSVEAIELFKRMEAE------KIELDGVIVTVALSACADLGAVQMG 186
Query: 189 TCLHGCAVTFG--LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
++ ++ L DL + NS L MYVK GE E AR+LFDE + +D+ ++ +M+ GYA
Sbjct: 187 EEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA 246
Query: 247 QNGHAARVLELYHEMKLRRMS------PDPVTLLAVLSSCANLGAQVVG--------VEV 292
NG A LEL+ +MK S P+ VT + VL +C++ G G ++
Sbjct: 247 LNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDY 306
Query: 293 ERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM-VDKSVVSW 339
K + FG +++++ R G+L A + M + + V W
Sbjct: 307 NLKPREAHFG-------CMVDLFCRSGHLKDAHEFINQMPIKPNTVIW 347
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 244/492 (49%), Gaps = 10/492 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P WN + +K Q+ LSL+ +LRS + + S G
Sbjct: 67 PERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS-ESFDTKGL 125
Query: 84 Q-LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLN 141
+ +H I +G D S+++ YSK L A ++F + ++ +N MI GY
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+ ++LF M+ N TM+ L SG P+ L +H + LD
Sbjct: 186 GFWDKGINLFNLMQHRGHQP------NCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLD 239
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ V + + MY +C + A +F+ + DL++ +++++GY++ G+ L L+ E+
Sbjct: 240 SHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
++ PD V + VL SCA L V G EV + + G + + +ALI+MY++CG L
Sbjct: 300 RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLL 359
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
A ++F G+ +K++VS+ + A E F E++ G+ PD F +L C
Sbjct: 360 KCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV 441
H+GL +KG F+ M+ ++G++P EHY +V L+G AG+L+EA + + S++ D +
Sbjct: 420 CHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGI 479
Query: 442 WGALLGACKIHKNVELAELAFEHVIE-LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMR 500
GALL C++H+N LAE+ E++ + E Y V+LSN+Y+ + V R+R +
Sbjct: 480 LGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGIS 539
Query: 501 ERKLRKDPGCSY 512
E K PG S+
Sbjct: 540 ESYGGKLPGISW 551
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 179/399 (44%), Gaps = 11/399 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLNS 142
+LH+ V ++ DPY + L Y+ AR++FD + +N++I Y+
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
F +SLF ++ R D T NF T L G + C+HG A+ GL
Sbjct: 86 QFTTVLSLFSQILRSD---TRPDNF---TYACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
D ++ + Y K G + A +LF + DL WN M+ GY G + + L++ M+
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
R P+ T++A+ S + +V V + S+ ++ AL+NMY+RC +A
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
A +VF+ + + +V+ ++ A+ LF E+ SG +PD + VL +C+
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVW 442
+ G + R GL+ + S L+D+ + G LK AM L + K + +
Sbjct: 320 ELSDSVSGKEVHSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK-NIVSF 377
Query: 443 GALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLL 479
+L+ +H A F ++E L P I + LL
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 227/465 (48%), Gaps = 53/465 (11%)
Query: 47 ALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLIS 106
AL+++R ML K+CA G Q+H I++G D + ++L++
Sbjct: 124 ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVN 183
Query: 107 MYSKCSLPFLARRVFDETHNLPI----SYNAMISGYSLNSMFADAVSLFRRMRREDGSST 162
+Y + +AR+V D +P+ S+N+++S Y + +A +LF M + S
Sbjct: 184 VYGRSGYFEIARKVLDR---MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVES- 239
Query: 163 VKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVEL 222
+NF ++SG Y G V+
Sbjct: 240 --WNF-------MISG-----------------------------------YAAAGLVKE 255
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCA 281
A+++FD M VRD++SWNAMV+ YA G VLE++++M PD TL++VLS+CA
Sbjct: 256 AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACA 315
Query: 282 NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTA 341
+LG+ G V I++ G FL AL++MY++CG + +A VF + V +W +
Sbjct: 316 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNS 375
Query: 342 XXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
A+E+F EMV G +P+ F+ VLSAC+H G+ D+ F+ M Y
Sbjct: 376 IISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVY 435
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
++P EHY C+VDLLGR G+++EA +L+ + + +LLGACK +E AE
Sbjct: 436 RVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERI 495
Query: 462 FEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
++EL + Y +SN+Y+ E V+ R MR ++ +
Sbjct: 496 ANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 13/215 (6%)
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
N+++ YA + L ++ EM L + PD + VL +CA G ++ +
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVEL 358
G ++ F+ N L+N+Y R G AR V D M + VSW + A L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 359 FDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLG 418
FDEM V + ++S + AGL + FD M + + ++ +V
Sbjct: 229 FDEMEERNVES----WNFMISGYAAAGLVKEAKEVFDSMPVRDVVS-----WNAMVTAYA 279
Query: 419 RAGRLKEAMDLIKSM----KVKPDGAVWGALLGAC 449
G E +++ M KPDG ++L AC
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 44/282 (15%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLR-SSXXXXXXXXXXXXKSCAILSLPLTG 82
PV +WN + + Y E L ++ ML S+ +CA L G
Sbjct: 264 PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQG 323
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSLN 141
+H ++ + G + + + ++L+ MYSKC A VF T +S +N++IS S++
Sbjct: 324 EWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVH 383
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL---------- 191
+ DA+ +F M E F N +T +G++S CN L L
Sbjct: 384 GLGKDALEIFSEMVYEG------FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRV 437
Query: 192 ------HGCAVTF---------------GLDADLA--VMNSFLTMYVKCGEVELARQLFD 228
+GC V + AD A ++ S L + G++E A ++ +
Sbjct: 438 EPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIAN 497
Query: 229 EML---VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
+L +RD + M + YA +G +V++ M+ R++
Sbjct: 498 RLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVN 539
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 241/525 (45%), Gaps = 58/525 (11%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRS--SXXXXXXXXXXXXKSCAILSLPL- 80
P +W + + Y+EAL L+ M + + +C L +
Sbjct: 258 PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 81 -TGFQLHAHVIRTGSQP---DPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMIS 136
G QLHA VI G + D SL+ MY+ L A+ + +E+ +L S N +I+
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ-SCNIIIN 376
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAV 196
Y N A +LF R++ LH
Sbjct: 377 RYLKNGDLERAETLFERVKS----------------------------------LH---- 398
Query: 197 TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLE 256
D S + Y++ G+V A LF ++ +D ++W M+SG QN A
Sbjct: 399 ------DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP--FLTNALINM 314
L +M + P T +LSS G + I + +P L N+L++M
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 315 YARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
YA+CG + A +F MV K VSW + A+ LF EM+ SG +P+ F
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
+ VLSACSH+GL +GL F M+ Y +QPG +HY ++DLLGRAG+LKEA + I ++
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
Query: 435 VKPDGAVWGALLGACKIH---KNVE-LAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSE 490
PD V+GALLG C ++ K+ E +AE A ++EL+P N +V L N+Y+ +
Sbjct: 633 FTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHD 692
Query: 491 GVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEI 535
+R M + ++K PGCS+V G+ +VF SGD++ + ++
Sbjct: 693 MEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 188/489 (38%), Gaps = 90/489 (18%)
Query: 81 TGFQLHAHVI-RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYS 139
TG+ A V+ + + T +++++ Y KC A +F E +S+ M++
Sbjct: 90 TGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALC 149
Query: 140 LNSMFADAVSLFRRMR---------------REDGSSTVKFNFNSVTMLGLVSGCNLPNH 184
+ DAV LF M R K F+++ +VS +
Sbjct: 150 DDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKG 209
Query: 185 LPTGTCLHGCAVTFG--LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMV 242
+ + FG + ++ S + Y + G+V A +LF EM R+++SW AM+
Sbjct: 210 YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Query: 243 SGYAQNGHAARVLELYHEMK--LRRMSPDPVTLLAVLSSCANLG-----------AQVVG 289
SG+A N L L+ EMK + +SP+ TL+++ +C LG AQV+
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 290 VEVER--------------------------------KIEQCGFGSNPFLTNA------- 310
E ++ C N +L N
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAET 389
Query: 311 ----------------LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+I+ Y G+++RA +F + DK V+WT
Sbjct: 390 LFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAE 449
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYG-LQPGPEHYSCL 413
A L +MVR G++P + + +LS+ D+G H + + P + L
Sbjct: 450 AASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSL 509
Query: 414 VDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPT 471
V + + G +++A ++ M V+ D W +++ H + A F+ +++ +P
Sbjct: 510 VSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPN 568
Query: 472 NIGYYVLLS 480
++ + +LS
Sbjct: 569 SVTFLGVLS 577
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
S L+ Y K G ++ AR LF+ M R++++ NAM++GY + L+ R M
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF-----REMPK 136
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+ V+ +L++ + G VE+ ++ + N N L+ R G++ +A+ VF
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
D M + VVSW A A LF +M V
Sbjct: 193 DAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 262/543 (48%), Gaps = 44/543 (8%)
Query: 23 HPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTG 82
HP+ WN+ + + ++++E++S+Y+ M+ K+CA L G
Sbjct: 148 HPL----PWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLN 141
+H + + + + Y ++LISMY + +ARR+FD + +S+NA+I+ Y+
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 142 SMFADAVSLFRRMRRED-GSSTVKFN----------------------------FNSVTM 172
+A L RM +S V +N SV M
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAV---TFGLDADLAVMNSFLTMYVKCGEVELARQLFDE 229
+ + C+ L G H + +F D D V NS +TMY +C ++ A +F +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 230 MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG 289
+ L +WN+++SG+A N + L EM L P+ +TL ++L A +G G
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 290 VEVERKI-EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
E I + + L N+L++MYA+ G + A+ VFD M + V++T+
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGR 502
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A+ F +M RSG++PD V VLSACSH+ L +G F +ME +G++ E
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH-VIE 467
HYSC+VDL RAG L +A D+ ++ +P A+ LL AC IH N + E A + ++E
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLE 622
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR 527
+P ++G+Y+LL+++Y+ + ++ V+ ++ + ++K + +E ++ G+
Sbjct: 623 TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL----DGEN 678
Query: 528 NHP 530
N P
Sbjct: 679 NKP 681
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 175/413 (42%), Gaps = 45/413 (10%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PIS 130
+C + + G QLHAH I +G + D L++ YS +L A+ + + + L P+
Sbjct: 92 TCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+N +I Y N F ++VS+++RM + G +F + SV + C G
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSK-GIRADEFTYPSV-----IKACAALLDFAYGRV 205
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+HG +L V N+ ++MY + G+V++AR+LFD M RD +SWNA+++ Y
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 251 AARVLELYHEMKLRRMSPDPVT-----------------------------------LLA 275
+L M L + VT ++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 276 VLSSCANLGAQVVGVEVE-RKIEQCGFGSN-PFLTNALINMYARCGNLARARAVFDGMVD 333
L +C+++GA G I C F + + N+LI MY+RC +L A VF +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
S+ +W + L EM+ SG P+ ++L + G G +
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ R+ + ++ LVD+ ++G + A + SM+ K D + +L+
Sbjct: 446 HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI 497
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 4/240 (1%)
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
+A F +R + GS F + L+S C N G LH ++ GL+ D
Sbjct: 64 EAFRTFSLLRYQSGSH----EFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
++ +T Y ++ A+ + + + + WN ++ Y +N + +Y M +
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ D T +V+ +CA L G V IE N ++ NALI+MY R G + AR
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
+FD M ++ VSW A A +L D M SGV + T+ C AG
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 262/543 (48%), Gaps = 44/543 (8%)
Query: 23 HPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTG 82
HP+ WN+ + + ++++E++S+Y+ M+ K+CA L G
Sbjct: 148 HPL----PWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLN 141
+H + + + + Y ++LISMY + +ARR+FD + +S+NA+I+ Y+
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 142 SMFADAVSLFRRMRRED-GSSTVKFN----------------------------FNSVTM 172
+A L RM +S V +N SV M
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 173 LGLVSGCNLPNHLPTGTCLHGCAV---TFGLDADLAVMNSFLTMYVKCGEVELARQLFDE 229
+ + C+ L G H + +F D D V NS +TMY +C ++ A +F +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 230 MLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG 289
+ L +WN+++SG+A N + L EM L P+ +TL ++L A +G G
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 290 VEVERKI-EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
E I + + L N+L++MYA+ G + A+ VFD M + V++T+
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGR 502
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A+ F +M RSG++PD V VLSACSH+ L +G F +ME +G++ E
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEH-VIE 467
HYSC+VDL RAG L +A D+ ++ +P A+ LL AC IH N + E A + ++E
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLE 622
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR 527
+P ++G+Y+LL+++Y+ + ++ V+ ++ + ++K + +E ++ G+
Sbjct: 623 TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL----DGEN 678
Query: 528 NHP 530
N P
Sbjct: 679 NKP 681
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 175/413 (42%), Gaps = 45/413 (10%)
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PIS 130
+C + + G QLHAH I +G + D L++ YS +L A+ + + + L P+
Sbjct: 92 TCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
+N +I Y N F ++VS+++RM + G +F + SV + C G
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSK-GIRADEFTYPSV-----IKACAALLDFAYGRV 205
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGH 250
+HG +L V N+ ++MY + G+V++AR+LFD M RD +SWNA+++ Y
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 251 AARVLELYHEMKLRRMSPDPVT-----------------------------------LLA 275
+L M L + VT ++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 276 VLSSCANLGAQVVGVEVE-RKIEQCGFGSN-PFLTNALINMYARCGNLARARAVFDGMVD 333
L +C+++GA G I C F + + N+LI MY+RC +L A VF +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
S+ +W + L EM+ SG P+ ++L + G G +
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL 446
+ R+ + ++ LVD+ ++G + A + SM+ K D + +L+
Sbjct: 446 HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI 497
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 4/240 (1%)
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
+A F +R + GS F + L+S C N G LH ++ GL+ D
Sbjct: 64 EAFRTFSLLRYQSGSH----EFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
++ +T Y ++ A+ + + + + WN ++ Y +N + +Y M +
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ D T +V+ +CA L G V IE N ++ NALI+MY R G + AR
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 326 AVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAG 385
+FD M ++ VSW A A +L D M SGV + T+ C AG
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 206/415 (49%), Gaps = 48/415 (11%)
Query: 102 SSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADAVSLFRRMRREDGS 160
+S+I Y K AR +FD+ + IS+N MI GY S DA +LF M D
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH 344
Query: 161 STVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEV 220
S N ++ Y G V
Sbjct: 345 S---------------------------------------------WNMMVSGYASVGNV 359
Query: 221 ELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSC 280
ELAR F++ + +SWN++++ Y +N ++L+ M + PDP TL ++LS+
Sbjct: 360 ELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS 419
Query: 281 ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM-VDKSVVSW 339
L +G+++ + + + P + NALI MY+RCG + +R +FD M + + V++W
Sbjct: 420 TGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITW 478
Query: 340 TAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
A A+ LF M +G+ P FV+VL+AC+HAGL D+ F M
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Query: 400 KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAE 459
Y ++P EHYS LV++ G+ +EAM +I SM +PD VWGALL AC+I+ NV LA
Sbjct: 539 VYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAH 598
Query: 460 LAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVE 514
+A E + LEP + YVLL N+Y+D + +VR+ M ++++K+ G S+V+
Sbjct: 599 VAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 174/442 (39%), Gaps = 77/442 (17%)
Query: 117 ARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLG 174
AR +F+ E N +++N MISGY A LF M + D V +N TM+
Sbjct: 59 ARDIFEKLEARN-TVTWNTMISGYVKRREMNQARKLFDVMPKRD---VVTWN----TMIS 110
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
C L L + D N+ ++ Y K + A LF++M R+
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAV-----LSSCANLGAQ--- 286
+SW+AM++G+ QNG + L+ +M ++ SP + + LS A + Q
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 287 ---------------VVGVEVERKIEQ-----------CG----------FGSNPFLTNA 310
+VG ++E CG F N N+
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+I Y + G++ AR +FD M D+ +SW A LF EM P+
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PN 340
Query: 371 RTV--FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
R + ++S + G + HYF++ K+ + ++ ++ + KEA+D
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKEAVD 395
Query: 429 LIKSMKV---KPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSD 485
L M + KPD +LL A N+ L + V++ ++ + L +YS
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSR 455
Query: 486 AKNSEGVLRVRVMMRERKLRKD 507
++ R + E KL+++
Sbjct: 456 CGE---IMESRRIFDEMKLKRE 474
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 139/338 (41%), Gaps = 56/338 (16%)
Query: 10 TAVAPPGSGEPKRH-----PVNPTTAWNLRLMELSKQRQYKEALSLYRHM-LRSSXXXXX 63
+ A G+ E RH P T +WN + K + YKEA+ L+ M +
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 64 XXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE 123
S +++L L G Q+H V++T PD ++LI+MYS+C +RR+FDE
Sbjct: 411 TLTSLLSASTGLVNLRL-GMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDE 468
Query: 124 T--HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNL 181
I++NAMI GY+ + ++A++LF M+ S
Sbjct: 469 MKLKREVITWNAMIGGYAFHGNASEALNLFGSMK---------------------SNGIY 507
Query: 182 PNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAM 241
P+H+ + L+ CA +D A S +++Y ++E ++++
Sbjct: 508 PSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME---------------HYSSL 552
Query: 242 VSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSC---ANLGAQVVGVEVERKIEQ 298
V+ + G + + M PD A+L +C N+G V E ++E
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFE---PDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEP 609
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV 336
S P++ L NMYA G A V M K +
Sbjct: 610 E--SSTPYVL--LYNMYADMGLWDEASQVRMNMESKRI 643
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
N L ++ G + AR +F+++ R+ ++WN M+SGY + + +L+ M R
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
D VT ++S + G + +E RK+ + F N +I+ YA+ + A +
Sbjct: 101 -DVVTWNTMISGYVSCGG-IRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEM 362
F+ M +++ VSW+A AV LF +M
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 225/469 (47%), Gaps = 45/469 (9%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSL 140
G QLH +++G + + Y +SL+SMYS+C LA R+F++ H ++YNA ISG
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N + S+F MR+ N VT + ++ C +L G LHG +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEP-----NDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEML-VRDLISWNAMVSGYAQNGHAARVLELYH 259
+ V + + MY KC + A +F E+ R+LISWN+++SG NG +EL+
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 260 EMKLRRMSPDPVT-----------------------------------LLAVLSSCANLG 284
++ + PD T L ++LS+C+++
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM--VDKSVVSWTAX 342
G E+ + + + F+ +LI+MY +CG + AR +FD K V W
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM 442
Query: 343 XXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYG 402
A+E+F+ + V P F VLSACSH G +KG F M+ +YG
Sbjct: 443 ISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYG 502
Query: 403 LQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAF 462
+P EH C++DLLGR+GRL+EA ++I M +LLG+C+ H + L E A
Sbjct: 503 YKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAA 561
Query: 463 EHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCS 511
+ ELEP N +V+LS+IY+ + E V +R ++ +++L K PG S
Sbjct: 562 MKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 210/471 (44%), Gaps = 49/471 (10%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI- 129
KSCA L + G LHA V++TG D +T ++L+SMY K A +V DE I
Sbjct: 39 KSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIA 98
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S NA +SG N DA +F R GS NSVT+ ++ GC + G
Sbjct: 99 SVNAAVSGLLENGFCRDAFRMFGDARV-SGS-----GMNSVTVASVLGGC---GDIEGGM 149
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
LH A+ G + ++ V S ++MY +CGE LA ++F+++ + ++++NA +SG +NG
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 250 HAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
V +++ M K P+ VT + +++CA+L G ++ + + F +
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 309 NALINMYARCGNLARARAVFDGMVD-KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
ALI+MY++C A VF + D ++++SW + AVELF+++ G+
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEM-------------------ERKYGLQPGPE 408
+PD + +++S S G + +F+ M + L+ G E
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 409 HY---------------SCLVDLLGRAGRLKEAMDLIKSMKVKP-DGAVWGALLGACKIH 452
+ + L+D+ + G A + + KP D W ++ H
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 453 KNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRE 501
E A FE + E +EP+ + +LS +G R+M E
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 19/324 (5%)
Query: 168 NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLF 227
N T L+ C + G LH V G D+ + ++MY+K +V A ++
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 228 DEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
DEM R + S NA VSG +NG ++ + ++ + VT+ +VL C ++
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG-- 147
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
G+++ + GF ++ +L++MY+RCG A +F+ + KSVV++ A
Sbjct: 148 -GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 348 XXXXXXXAVELFDEMVR-SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPG 406
+F+ M + S P+ FV ++AC A L + L Y ++ +GL
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC--ASLLN--LQYGRQL---HGLVMK 259
Query: 407 PEHY------SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAEL 460
E + L+D+ + K A + +K + W +++ I+ E A
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 461 AFEHVIE--LEPTNIGYYVLLSNI 482
FE + L+P + + L+S
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGF 343
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 13/260 (5%)
Query: 25 VNPTTA-WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
+ P +A WN + S+ + EA + ML +C+ + G
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGK 388
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETH---NLPISYNAMISGYSL 140
++H HVI+ ++ D + +SLI MY KC L ARR+FD P+ +N MISGY
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGC-AVTFG 199
+ A+ +F +R E K + T ++S C+ ++ G+ + +G
Sbjct: 449 HGECESAIEIFELLREE------KVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYG 502
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
+ + + + G + A+++ D+M +++++ Q H VL
Sbjct: 503 YKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQ--HLDPVLGEEA 560
Query: 260 EMKLRRMSPDPVTLLAVLSS 279
MKL + P+ +LSS
Sbjct: 561 AMKLAELEPENPAPFVILSS 580
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 189/373 (50%), Gaps = 29/373 (7%)
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
PD + + SCANL + +V Q F +P L N +I+M+ C ++ A+ V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 328 FDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLT 387
FD MVDK + SW A+ LF+EM + G++P+ F+TV AC+ G
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 388 DKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
++ +FD M+ ++G+ P EHY ++ +LG+ G L EA I+ + +P W A+
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR-- 505
++H +++L + E +++++P+ + + K + V ++ R L
Sbjct: 414 YARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFY 473
Query: 506 KDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDEKYRVRSEELLN 565
KD KG V+V ++ +H D++ + + LL
Sbjct: 474 KDEAKEMAAKKGVVYV---------------------PDTRFVLHDIDQE--AKEQALL- 509
Query: 566 GNGVHSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFH 625
HSERLAIA+ ++ T P +TI+KNLRVC DCH F+K++SKI+ R I+RD RFH
Sbjct: 510 ---YHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFH 566
Query: 626 HFRDGVCSCKDYW 638
HF+DG CSC DYW
Sbjct: 567 HFKDGKCSCGDYW 579
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
D + N ++M+ +C + A+++FD M+ +D+ SW+ M+ Y+ NG L L+ EM
Sbjct: 269 GDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 262 KLRRMSPDPVTLLAVLSSCANLGA-QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
+ P+ T L V +CA +G + + + + G ++ + +CG+
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 321 LARARA-VFDGMVDKSVVSWTA 341
L A + D + + W A
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEA 410
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 12 VAPPGSGEPKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXK 71
VAPP S E +M L ++R YK+A+ L L +
Sbjct: 203 VAPPPSVE--------------EVMRLCQRRLYKDAIEL----LDKGAMPDRECFVLLFE 244
Query: 72 SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-S 130
SCA L ++H H +++ + DP + +ISM+ +CS A+RVFD + + S
Sbjct: 245 SCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDS 304
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRR 156
++ M+ YS N M DA+ LF M +
Sbjct: 305 WHLMMCAYSDNGMGDDALHLFEEMTK 330
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 240/475 (50%), Gaps = 25/475 (5%)
Query: 46 EALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLI 105
+ L+L+ + R+S +C++LS P TG Q+HA +I+ G++ ++++LI
Sbjct: 67 DTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 106 SMYSKCSLPFLARRVFD--ETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
MYSK + RVF+ E +L +S+NA++SG+ N +A+ +F M RE
Sbjct: 127 DMYSKYGHLVDSVRVFESVEEKDL-VSWNALLSGFLRNGKGKEALGVFAAMYRE------ 179
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS-FLTMYVKCGEVEL 222
+ + T+ +V C L G +H V G DL V+ + ++ Y G +
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINE 237
Query: 223 ARQLFDEMLVR-DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCA 281
A ++++ + V D + N+++SG +N + L + R P+ L + L+ C+
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL-----MSRQRPNVRVLSSSLAGCS 292
Query: 282 NLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTA 341
+ +G ++ + GF S+ L N L++MY +CG + +AR +F + KSVVSWT+
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 342 XXXXXXXXXXXXXAVELFDEMVR--SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
A+E+F EM SGV P+ F+ V+SAC+HAGL +G F M+
Sbjct: 353 MIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Query: 400 KYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDG----AVWGALLGACKIHKNV 455
KY L PG EHY C +D+L +AG +E L++ M + A+W A+L AC ++ ++
Sbjct: 413 KYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDL 472
Query: 456 ELAELAFEHVI-ELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPG 509
E ++ E P N YVL+SN Y+ + V +R ++ + L K G
Sbjct: 473 TRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 10/242 (4%)
Query: 223 ARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD--PVTLLAVLSSC 280
A LFDE+ RDL S N+ +S + ++G+ L L+ +++ R SPD T VL +C
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGAC 94
Query: 281 ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWT 340
+ L G +V + + G + ALI+MY++ G+L + VF+ + +K +VSW
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKG--LHYFDEME 398
A A+ +F M R V +V+ C+ + +G +H +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 399 RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELA 458
+ + G + ++ G + EAM + S+ V D + +L+ C ++N + A
Sbjct: 215 GRDLVVLG----TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
Query: 459 EL 460
L
Sbjct: 271 FL 272
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 231/472 (48%), Gaps = 55/472 (11%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSL 140
G ++ + IR + D S+++ MY+KC A++VFD T I +N +++ Y+
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
+ + +A+ LF M+ E G+
Sbjct: 454 SGLSGEALRLFYGMQLE-----------------------------------------GV 472
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLE 256
++ N + ++ G+V+ A+ +F +M ++ +LISW M++G QNG + +
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE----RKIEQCGFGSNPFLTNALI 312
+M+ + P+ ++ LS+CA+L + +G + R ++ S + +L+
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS---IETSLV 589
Query: 313 NMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
+MYA+CG++ +A VF + + A A+ L+ + G++PD
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
VLSAC+HAG ++ + F ++ K ++P EHY +VDLL AG ++A+ LI+
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 433 MKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGV 492
M KPD + +L+ +C + EL + ++E EP N G YV +SN Y+ + + V
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 769
Query: 493 LRVRVMMRERKLRKDPGCSYVEYKGK--VHVFYSGDRNHPQMKEIYRKVAEL 542
+++R MM+ + L+K PGCS+++ G+ VHVF + D+ H ++ EI +A L
Sbjct: 770 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 11/383 (2%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PI 129
K+C L G +H +V+++G + + SSL MY KC + A +VFDE + +
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV 240
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
++NA++ GY N +A+ LF MR++ T VT+ +S + G
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT------RVTVSTCLSASANMGGVEEGK 294
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
H A+ G++ D + S L Y K G +E A +FD M +D+++WN ++SGY Q G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
+ + M+L ++ D VTL ++S+ A +G EV+ + F S+ L +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 310 ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRP 369
+++MYA+CG++ A+ VFD V+K ++ W A+ LF M GV P
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 370 DRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
+ + ++ + G D+ F +M+ G+ P ++ +++ + + G +EA+
Sbjct: 475 NVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 430 IKSMK---VKPDGAVWGALLGAC 449
++ M+ ++P+ L AC
Sbjct: 534 LRKMQESGLRPNAFSITVALSAC 556
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 193/454 (42%), Gaps = 18/454 (3%)
Query: 2 SIVQHRPQTAVAPPGSGEPKRHPVNPT-TAWNLRLMELSKQRQYKEALSLYRHMLRSSXX 60
+I P + + P S +P+ T++ R+ L K + KEALSL M +
Sbjct: 8 TIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLR 67
Query: 61 XXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGS--QPDPYTRSSLISMYSKCSLPFLAR 118
+ C TG Q+HA +++ G + Y + L+ Y+KC +A
Sbjct: 68 IGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAE 127
Query: 119 RVFDETHNLPI-SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVS 177
+F + + S+ A+I + A+ F M + NF + +
Sbjct: 128 VLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE---IFPDNF---VVPNVCK 181
Query: 178 GCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS 237
C G +HG V GL+ + V +S MY KCG ++ A ++FDE+ R+ ++
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA 241
Query: 238 WNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE 297
WNA++ GY QNG + L+ +M+ + + P VT+ LS+ AN+G G +
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 298 QCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVE 357
G + L +L+N Y + G + A VFD M +K VV+W A+
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 358 LFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEME---RKYGLQPGPEHYSCLV 414
+ M ++ D T++SA + + L E++ ++ + S ++
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAART----ENLKLGKEVQCYCIRHSFESDIVLASTVM 417
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGA 448
D+ + G + +A + S V+ D +W LL A
Sbjct: 418 DMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+W + + + +EA+ R M S +CA L+ G +H ++
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI 572
Query: 90 IRTGSQPDPYT-RSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLNSMFAD 146
IR + +SL+ MY+KC A +VF LP+S NAMIS Y+L +
Sbjct: 573 IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS-NAMISAYALYGNLKE 631
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN----------LPNHLPTGTCLHGCAV 196
A++L+R + V +++T+ ++S CN + + + + C
Sbjct: 632 AIALYRSLE------GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 197 TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
+GL DL GE E A +L +EM
Sbjct: 686 HYGLMVDL---------LASAGETEKALRLIEEM 710
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 241/534 (45%), Gaps = 74/534 (13%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCS----------------LP 114
K A L+ G QLH +++TG+ + SSLI MYSKC +
Sbjct: 133 KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVD 192
Query: 115 FLARRVFDETH-------------------NLPISYNAMISGYSLNSMFADAVSLFRRMR 155
+AR + N IS+N +I+GY+ N +A+ + M
Sbjct: 193 SVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Query: 156 REDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYV 215
E+G + +F +V L ++S L G +H + G ++ V + + +Y
Sbjct: 253 -ENGLKWDEHSFGAV--LNVLSSLK---SLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 216 KCGEVELA-------------------------------RQLFDEMLVRDLISWNAMVSG 244
KCG ++ A ++LFD + ++L+ W AM G
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 245 YAQNGHAARVLELYHEMKLRRM-SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGS 303
Y VLEL +PD + +++VL +C+ G E+ + G
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV 363
+ L A ++MY++CGN+ A +FD ++ V + A + + F++M
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 364 RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRL 423
G +PD F+ +LSAC H GL +G YF M Y + P HY+C++DL G+A RL
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 424 KEAMDLIKSM-KVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNI 482
+A++L++ + +V+ D + GA L AC +KN EL + E ++ +E +N Y+ ++N
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANA 606
Query: 483 YSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIY 536
Y+ + + + R+R MR ++L GCS+ + H+F S D +H + + IY
Sbjct: 607 YASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 202/501 (40%), Gaps = 107/501 (21%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET----------------- 124
GF H I++GS + + L+++YSK L AR VFDE
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 125 -HNLP---------------ISYNAMISGYS-LNSMFADAVSLFRRMRREDGSSTVKFNF 167
+N+ I+YN ++SG++ + ++A+ +F M R++ +F
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 168 NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLF 227
TM+ L L N + G LHG V G D ++S + MY KCG+ + +F
Sbjct: 127 TVTTMVKL--SAKLTN-VFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 228 DEMLVR----------------------------------DLISWNAMVSGYAQNGHAAR 253
+ V D ISWN +++GYAQNG+
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
L++ M+ + D + AVL+ ++L + +G EV ++ + G SN F+++ +++
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 314 MYARCGN-------------------------------LARARAVFDGMVDKSVVSWTAX 342
+Y +CGN + A+ +FD + +K++V WTA
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM 363
Query: 343 XXXXXXXXXXXXAVELFDEMVRSGVR-PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
+EL + + PD V V+VL ACS + G R
Sbjct: 364 FLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT- 422
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
G+ + + VD+ + G ++ A + S + D ++ A++ C H + +
Sbjct: 423 GILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHEAKSFQH 481
Query: 462 FEHVIE--LEPTNIGYYVLLS 480
FE + E +P I + LLS
Sbjct: 482 FEDMTEGGFKPDEITFMALLS 502
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 157/352 (44%), Gaps = 41/352 (11%)
Query: 22 RHP-VNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
R+P +N T +WN + ++ +EAL + M + + L
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLK 277
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISY------NAM 134
G ++HA V++ GS + + S ++ +Y KC + E+ +L + ++M
Sbjct: 278 IGKEVHARVLKNGSYSNKFVSSGIVDVYCKC-----GNMKYAESAHLLYGFGNLYSASSM 332
Query: 135 ISGYSLNSMFADAVSLFR------------------RMRREDGSSTVKFNF--------N 168
I GYS +A LF +R+ D + F +
Sbjct: 333 IVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPD 392
Query: 169 SVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFD 228
S+ M+ ++ C+L ++ G +HG ++ G+ D ++ +F+ MY KCG VE A ++FD
Sbjct: 393 SLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFD 452
Query: 229 EMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
RD + +NAM++G A +GH A+ + + +M PD +T +A+LS+C + G +
Sbjct: 453 SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLE 512
Query: 289 GVE-VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM--VDKSVV 337
G + + IE +I++Y + L +A + +G+ V+K V
Sbjct: 513 GEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAV 564
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 201/403 (49%), Gaps = 11/403 (2%)
Query: 31 WNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCA--ILSLPLTGFQLHAH 88
W + L+ ++ EAL L+R M+ + +L L G ++HAH
Sbjct: 283 WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL-GKEVHAH 341
Query: 89 VIRTGSQPD-PYTRSSLISMYSKCSLPFLARRVF-DETHNLPISYNAMISGYSLNSMFAD 146
V+++ + + P+ S LI +Y KC RRVF IS+ A++SGY+ N F
Sbjct: 342 VLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQ 401
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
A+ M++E F + VT+ ++ C + G +H A+ ++++
Sbjct: 402 ALRSIVWMQQEG------FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
+ S + MY KCG E +LFD + R++ +W AM+ Y +N +E++ M L +
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
PD VT+ VL+ C++L A +G E+ I + F S PF++ +I MY +CG+L A
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 327 VFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
FD + K ++WTA A+ F++MV G P+ F VLS CS AG
Sbjct: 576 SFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGF 635
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
D+ +F+ M R Y LQP EHYS +++LL R GR++EA L
Sbjct: 636 VDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 210/481 (43%), Gaps = 54/481 (11%)
Query: 38 LSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPD 97
++Q + AL++ ++ + ++C L G Q+H H+ G + +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 98 PYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSM--FADAVSLFRRM 154
+ R+ L+ MY+ C A++VFDE+ + + S+NA++ G ++ + D +S F M
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 155 RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMY 214
R + + N ++ + + L G H A+ GL + + S + MY
Sbjct: 206 RE------LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMY 259
Query: 215 VKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTL 273
KCG+V LAR++FDE++ RD++ W AM++G A N L L+ M ++ P+ V L
Sbjct: 260 FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVIL 319
Query: 274 LAVLSSCANLGAQVVGVEVERKI-EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
+L ++ A +G EV + + + PF+ + LI++Y +CG++A R VF G
Sbjct: 320 TTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK 379
Query: 333 DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC----------- 381
++ +SWTA A+ M + G RPD TVL C
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 382 ------------------------SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLL 417
S G+ + + FD +E Q + ++ ++D
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-----QRNVKAWTAMIDCY 494
Query: 418 GRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG 474
L+ +++ + M K +PD G +L C K ++L + H+++ E +I
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 475 Y 475
+
Sbjct: 555 F 555
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 209/422 (49%), Gaps = 52/422 (12%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
YN +I Y + +++LF M +S V+ N ++T L+ + G
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHML----ASHVQPN--NLTFPSLIKAACSSFSVSYGVA 107
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML------------------- 231
LHG A+ G D V SF+ Y + G++E +R++FD++L
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 232 ------------VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR---MSPDPVTLLAV 276
V D++SW +++G+++ G A+ L ++ EM ++P+ T ++V
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 277 LSSCAN-------LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
LSSCAN LG Q+ G + ++I L AL++MY + G+L A +FD
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEII-----LTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
+ DK V +W A A+E+F+ M S V P+ + +L+AC+ + L D
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
G+ F + +Y + P EHY C+VDL+GRAG L +A + I+S+ +PD +V GALLGAC
Sbjct: 343 GIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGAC 402
Query: 450 KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPG 509
KIH+N EL + +I L+P + G YV LS + N ++R M E +RK P
Sbjct: 403 KIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Query: 510 CS 511
S
Sbjct: 463 YS 464
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 44/285 (15%)
Query: 43 QYKEALSLYRHMLRSSXXXXXXXXXXXXKS-CAILSLPLTGFQLHAHVIRTGSQPDPYTR 101
+YK +L+L+ HML S K+ C+ S+ G LH ++ G DP+ +
Sbjct: 66 EYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY-GVALHGQALKRGFLWDPFVQ 124
Query: 102 SSLISMYSKCSLPFLARRVFDETHN----------------------------LPI---- 129
+S + Y + +R++FD+ N +P+
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNH--LPT 187
S+ +I+G+S + A A+ +F M + + + N T + ++S C + +
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITP---NEATFVSVLSSCANFDQGGIRL 241
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQ 247
G +HG ++ + + + L MY K G++E+A +FD++ + + +WNA++S A
Sbjct: 242 GKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS 301
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCA-----NLGAQV 287
NG + LE++ MK + P+ +TLLA+L++CA +LG Q+
Sbjct: 302 NGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 216/475 (45%), Gaps = 47/475 (9%)
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNS 142
FQ+HA +I +G+ D L+ S R D ++ + I Y ++ Y N
Sbjct: 39 FQVHARLITSGNFWDSSWAIRLLKSSS---------RFGDSSYTVSI-YRSIGKLYCANP 88
Query: 143 MF-ADAVSLFRRMRREDGSSTVKFNF--NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+F A VS + ++F F +S T + L+S + +G HG A+ G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLF-------------------------------D 228
D L V NS + MY CG ++LA++LF D
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 229 EMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
EM +++ISWN M+S Y + + L+ EM + TL+ +L++C
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
G V + + S+ + ALI+MY +C + AR +FD + ++ V+W
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
+ELF+ M+ +RPD FV VL C+ AGL +G Y+ M ++ ++P
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
Query: 409 HYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHKNVELAELAFEHV 465
H C+ +L AG +EA + +K++ V P+ W LL + + N L E + +
Sbjct: 389 HQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSL 448
Query: 466 IELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVH 520
IE +P N YY LL NIYS E V RVR M++ERK+ + PGC V+ K VH
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 12/226 (5%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +WN+ + ++SL+R M+R+ +C + G
Sbjct: 211 PDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGR 270
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-THNLPISYNAMISGYSLNS 142
+HA +IRT ++LI MY KC LARR+FD + +++N MI + L+
Sbjct: 271 SVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHG 330
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVT-FGLD 201
+ LF M + VT +G++ GC + G + V F +
Sbjct: 331 RPEGGLELFEAMING------MLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 202 ADLAVMNSFLTMYVKCGEVELA----RQLFDEMLVRDLISWNAMVS 243
+ +Y G E A + L DE + + W ++S
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 29/342 (8%)
Query: 308 TNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
+ L+ MY+ CG A +VF+ M +K++ +W A+++F G
Sbjct: 292 NHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGN 351
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
PD +F + AC G D+GL +F+ M R YG+ P E Y LV++ G L EA+
Sbjct: 352 IPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEAL 411
Query: 428 DLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
+ ++ M ++P+ VW L+ ++H N+EL + E V L+PT + + +
Sbjct: 412 EFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL-----------NKQ 460
Query: 488 NSEGVLRVRVMMRERK-LRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYR--------- 537
+ EG + V+ E++ L+K G + K + F +GD N P+ E+++
Sbjct: 461 SREGFIPVKASDVEKESLKKRSGILH-GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHM 519
Query: 538 -KVAELENSVMEIHRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLR 596
+V + + M +H D++ + E LL G HSER+A A A+L++ P T++KNLR
Sbjct: 520 VEVGYVAETRMALHDIDQESK---ETLLLG---HSERIAFARAVLNSAPRKPFTVIKNLR 573
Query: 597 VCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
VCVDCH +K++S IV R+ I RD RFH ++G C+CKDYW
Sbjct: 574 VCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 191/367 (52%), Gaps = 29/367 (7%)
Query: 170 VTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL--DADLAVMNSFLTMYVKCGEVELARQLF 227
V +LG + + L G +HG G +++L + + L Y K G++ AR++F
Sbjct: 112 VFVLGACARSASSSALRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVF 170
Query: 228 DEMLVRDLISWNAMVSGYAQ-----NGHAARVLELYHEMKLRRMS-------PDPVTLLA 275
DEM R ++WNAM+ GY N +A + + L+ RR S P T++
Sbjct: 171 DEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLF-----RRFSCCGSGVRPTDTTMVC 225
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGS--NPFLTNALINMYARCGNLARARAVFDGMVD 333
VLS+ + G +G V IE+ GF + F+ AL++MY++CG L A +VF+ M
Sbjct: 226 VLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV 285
Query: 334 KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
K+V +WT+ L + M SG++P+ F ++LSA H GL ++G+
Sbjct: 286 KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIEL 345
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHK 453
F M+ ++G+ P EHY C+VDLLG+AGR++EA I +M +KPD + +L AC I+
Sbjct: 346 FKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYG 405
Query: 454 NVELAELAFEHVIELE-------PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRK 506
+ E + ++E+E + YV LSN+ + V ++R M+ER+++
Sbjct: 406 ETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKT 465
Query: 507 DPGCSYV 513
PG S+V
Sbjct: 466 RPGYSFV 472
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 180/342 (52%), Gaps = 36/342 (10%)
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N++I MY+ CG++ A VF+ M ++++ +W A++ F + G +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
PD +F + AC G ++GL +F+ M ++YG+ P EHY LV +L G L EA+
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 429 LIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKN 488
++SM+ P+ +W L+ ++H ++ L + + V +L+ + + + ++
Sbjct: 340 FVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRL-----------NKES 386
Query: 489 SEGVLRVRV--MMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSV 546
G++ V+ +++E+ R G +Y + +GD + P+ +E+Y + L+ +
Sbjct: 387 KAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKSLKEHM 441
Query: 547 MEI----------HRPDEKYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIMKNLR 596
+EI H D++ + E L N H+ER A L T + I +MKNLR
Sbjct: 442 IEIGYVPLSKLALHDVDQE--SKDENLFN----HNERFAFISTFLDTPARSLIRVMKNLR 495
Query: 597 VCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
VC DCH +KL+SKIV R+ I RDA RFHH +DGVCSC++YW
Sbjct: 496 VCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+D++ NS + MY CG VE A +F+ M R+L +W ++ +A+NG ++ +
Sbjct: 214 SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGV 290
K PD + +C LG G+
Sbjct: 274 KQEGNKPDGEMFKEIFFACGVLGDMNEGL 302
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 205/426 (48%), Gaps = 45/426 (10%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRR----EDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
+N ++ YSL A L+ +++R D + ++ F+S T L L+ + P P
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLP-PFDSFTYLFLLKASSNPR-FP 137
Query: 187 TGTCLHGCAVT---FGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVS 243
+ G G ++ + V + + MY+ G + A ++FDEM R+ ++WN M++
Sbjct: 138 SLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMIT 197
Query: 244 GYAQNGHAARVLELYHEMKLRR--------------------------------MSPDPV 271
G G + L +M R + P+ +
Sbjct: 198 GLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEI 257
Query: 272 TLLAVLSSCANLGAQVVGVEVERKIEQCGF-GSNPFLTNALINMYARCGNLARARAVFDG 330
T+LA+L + NLG + V + + GF + +TN+LI+ YA+CG + A F
Sbjct: 258 TILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIE 317
Query: 331 MVD--KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
+ + K++VSWT AV +F +M R G++P+R ++VL+ACSH GL +
Sbjct: 318 IPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 377
Query: 389 KG-LHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLG 447
+ L +F+ M +Y + P +HY CLVD+L R GRL+EA + + ++ VW LLG
Sbjct: 378 EEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Query: 448 ACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
AC ++ + ELAE ++ELE ++ G YVL+SNI+ R R M R + K
Sbjct: 438 ACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKL 497
Query: 508 PGCSYV 513
PG S V
Sbjct: 498 PGHSQV 503
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVS 149
+ G + Y +++L+ MY A +VFDE P+++N MI+G + F A+
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 150 LFRRMRRE---------DGSSTVKFNFNSVTMLGLVSGCNL--PNHLPTGTCL------- 191
+M DG + V ++ + + C+ PN + L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 192 --------HGCAVTFG-LDADLAVMNSFLTMYVKCGEVELARQLFDEML--VRDLISWNA 240
H G + D+ V NS + Y KCG ++ A + F E+ ++L+SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 241 MVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
M+S +A +G + ++ +M+ + P+ VT+++VL++C++ G
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 38/388 (9%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN-LPISYNAMISGYSLNS 142
Q+H +I+ D LIS+ S A VF++ + ++N MI S+N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+A+ LF M S KF F V + C + + GT +HG A+ G
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFV-----IKACLASSSIRLGTQVHGLAIKAGFFN 152
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFD-------------------------------EML 231
D+ N+ + +Y KCG+ + R++FD +M
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
+R+++SW AM++ Y +N +L+ M++ + P+ T++ +L + LG+ +G
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXX 351
V + GF + FL ALI+MY++CG+L AR VFD M KS+ +W +
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGC 332
Query: 352 XXXAVELF-DEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A+ LF + + V PD FV VLSAC++ G GL YF M + YG+ P EH
Sbjct: 333 GEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHN 392
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
+C++ LL +A +++A +L++SM PD
Sbjct: 393 ACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 138/312 (44%), Gaps = 41/312 (13%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRS-SXXXXXXXXXXXXKSCAILSLPLTGFQLH 86
T WNL + LS + +EAL L+ M+ S K+C S G Q+H
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 87 AHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET---------------------- 124
I+ G D + +++L+ +Y KC P R+VFD+
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 125 ------HNLP----ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLG 174
+ +P +S+ AMI+ Y N +A LFRRM+ +D N T++
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP------NEFTIVN 256
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD 234
L+ L G +H A G D + + + MY KCG ++ AR++FD M +
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLR-RMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
L +WN+M++ +G L L+ EM+ + PD +T + VLS+CAN G G+
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYF 376
Query: 294 RKIEQCGFGSNP 305
++ Q +G +P
Sbjct: 377 TRMIQV-YGISP 387
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 230/498 (46%), Gaps = 27/498 (5%)
Query: 32 NLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIR 91
NL L + + K +Y M + C+ L G QLH+ V++
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 92 TG-SQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVS 149
+G + + + + L+ YS C + R F+ IS+N+++S + D++
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD-ADLAVMN 208
LF +M+ +++ + ++ C+ + + +G +H + G D + L V +
Sbjct: 302 LFSKMQFWGKRPSIR------PFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + MY KC +E + L+ + +L N++++ G ++E++ M
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI 415
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQC----------GFGSNPFLTNALINMYARC 318
D VTL VL + + + + + C G+ ++ ++ +LI+ Y +
Sbjct: 416 DEVTLSTVL--------KALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKS 467
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G +R VFD + ++ T+ V++ EM R + PD ++VL
Sbjct: 468 GQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVL 527
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
S CSH+GL ++G FD +E KYG+ PG + Y+C+VDLLGRAG +++A L+ + D
Sbjct: 528 SGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDAD 587
Query: 439 GAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVM 498
W +LL +C+IH+N + A E ++ LEP N Y+ +S Y + + E ++R +
Sbjct: 588 CVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Query: 499 MRERKLRKDPGCSYVEYK 516
R+L ++ G S V K
Sbjct: 648 AASRELMREIGYSSVVVK 665
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 22/326 (6%)
Query: 117 ARRVFDE-THNLPISYNAMISGYSLNSMFADAVSLFRRM----RREDGSSTVKFNFNSVT 171
A FDE + ++YN +ISG S A+ L+ M RE S+ F SV
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAST-----FPSV- 118
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
+S C+ G +H ++ G ++ V ++ + +Y V++A +LFDEML
Sbjct: 119 ----LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
R+L N ++ + Q G + R+ E+Y M+L ++ + +T ++ C++ G +
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 292 VERKIEQCGFG-SNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXX 350
+ + + G+ SN F+ N L++ Y+ CG+L+ + F+ + +K V+SW +
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKG--LHYFDEMERKYGLQPGPE 408
+++LF +M G RP F++ L+ CS G +H + K G
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY---VLKMGFDVSSL 351
Query: 409 HY-SCLVDLLGRAGRLKEAMDLIKSM 433
H S L+D+ G+ ++ + L +S+
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSL 377
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 151/363 (41%), Gaps = 11/363 (3%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
V +NL + S+ A+ LY M+ C+ G
Sbjct: 73 SVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGI 132
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET--HNLPISYNAMISGYSLN 141
Q+H VI G + + RS+L+ +Y+ L +A ++FDE NL + N ++ +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVC-NLLLRCFCQT 191
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
++ RM E + N +T ++ GC+ + G LH V G +
Sbjct: 192 GESKRLFEVYLRMELEGVAK------NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN 245
Query: 202 -ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+++ V N + Y CG++ + + F+ + +D+ISWN++VS A G L+L+ +
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFG-SNPFLTNALINMYARCG 319
M+ P ++ L+ C+ G ++ + + GF S+ + +ALI+MY +C
Sbjct: 306 MQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+ + ++ + ++ + +E+F M+ G D TVL
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 380 ACS 382
A S
Sbjct: 426 ALS 428
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 215 VKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLL 274
+K G + A + FDEM VRD++++N ++SG ++ G + R +ELY EM + T
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK 334
+VLS C++ G++V ++ GFG N F+ +AL+ +YA + A +FD M+D+
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 335 SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYF 394
++ E++ M GV + + ++ CSH L +G
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 395 DEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAV--WGALLGACKIH 452
+ + + LVD G L +M +S P+ V W +++ C +
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSM---RSFNAVPEKDVISWNSIVSVCADY 293
Query: 453 KNV 455
+V
Sbjct: 294 GSV 296
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 204/455 (44%), Gaps = 46/455 (10%)
Query: 29 TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAH 88
+WN + +K +AL L+ M +++ L G Q+H
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYSLNSMFADA 147
+I+ G + ++LI Y+KC +R FD + I +NA++SGY+ N
Sbjct: 342 LIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPIC 400
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+SLF +M + G ++ F++ L S C + LH V G + + V+
Sbjct: 401 LSLFLQMLQM-GFRPTEYTFST----ALKSCC-----VTELQQLHSVIVRMGYEDNDYVL 450
Query: 208 NSFLTMYVKC--------------------------------GEVELARQLFDEMLVRDL 235
+S + Y K G+ + +L + D
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDT 510
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
+SWN ++ +++ + V+EL+ M + PD T +++LS C+ L +G +
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGL 570
Query: 296 IEQCGFG-SNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
I + F ++ F+ N LI+MY +CG++ VF+ +K++++WTA
Sbjct: 571 ITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQE 630
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
A+E F E + G +PDR F+++L+AC H G+ +G+ F +M + YG++P +HY C V
Sbjct: 631 ALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAV 689
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC 449
DLL R G LKEA LI+ M D VW L C
Sbjct: 690 DLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 202/444 (45%), Gaps = 48/444 (10%)
Query: 72 SCAILSLPLTGFQLHAHVIRTG-SQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI- 129
SCA L + G QLH ++ G D + + L+ +Y + L +A +VF++ +P
Sbjct: 123 SCASLDVR-AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFED---MPFK 178
Query: 130 ---SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
++N M+S + + FR + R S T + LG++ G + L
Sbjct: 179 SLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLT------ESSFLGVLKGVSCVKDLD 232
Query: 187 TGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYA 246
LH A GLD +++V+NS ++ Y KCG +A ++F + D++SWNA++ A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF 306
++ + + L+L+ M SP+ T ++VL + + G ++ + + G +
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 307 LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
L NALI+ YA+CGNL +R FD + DK++V W A + LF +M++ G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNA-LLSGYANKDGPICLSLFLQMLQMG 411
Query: 367 VRPDRTVFVTVLSACS-------HAGLTDKGL----HYFDEMERKYG------------- 402
RP F T L +C H+ + G + + R Y
Sbjct: 412 FRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD 471
Query: 403 LQPGPEH---YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGAC-KIHKNVELA 458
GP + + + R G+ E++ LI +++ +PD W + AC + + E+
Sbjct: 472 WASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEVI 530
Query: 459 ELAFEHVIE--LEPTNIGYYVLLS 480
EL F+H+++ + P + +LS
Sbjct: 531 EL-FKHMLQSNIRPDKYTFVSILS 553
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 161/374 (43%), Gaps = 26/374 (6%)
Query: 85 LHAHVIRTGS---QPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSL 140
LHA I S QP Y +++IS+Y K LA +VFD+ +S+N +I GYS
Sbjct: 34 LHALSITLCSVLLQP-VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSK 92
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNF--NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
A +F MR F + N T+ GL+S +L + GT LHG ++ +
Sbjct: 93 YGDVDKAWGVFSEMRY--------FGYLPNQSTVSGLLSCASLD--VRAGTQLHGLSLKY 142
Query: 199 GLD-ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLEL 257
GL AD V L +Y + +E+A Q+F++M + L +WN M+S G +
Sbjct: 143 GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ E+ S + L VL + + + ++ + G + N+LI+ Y +
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
CGN A +F +VSW A A++LF M G P++ +V+V
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA---MDLIKSMK 434
L S L G M K G + G + L+D + G L+++ D I+
Sbjct: 323 LGVSSLVQLLSCG-RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN 381
Query: 435 VKPDGAVWGALLGA 448
+ W ALL
Sbjct: 382 I----VCWNALLSG 391
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T +WN+ + S+ ++E + L++HML+S+ C+ L G +H
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 88 HVIRTG-SQPDPYTRSSLISMYSKCSLPFLARRVFDETH--NLPISYNAMISGYSLNSMF 144
+ +T S D + + LI MY KC +VF+ET NL I++ A+IS ++
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNL-ITWTALISCLGIHGYG 628
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
+A+ F+ + ++ F + V+ + +++ C + G L +G++ ++
Sbjct: 629 QEALEKFKE------TLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEM-LVRDLISWNAMVSG 244
+ + + G ++ A L EM D W + G
Sbjct: 683 DHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 212/472 (44%), Gaps = 43/472 (9%)
Query: 25 VNPT-TAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL-TG 82
VNP+ +WN+ + + EA+ ++ ML + +C+ SL L G
Sbjct: 224 VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS-RSLALEVG 282
Query: 83 FQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN---------------- 126
+HA ++ D +S+ MY KC ARRVFD+T +
Sbjct: 283 KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 127 ------------LP----ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSV 170
+P +S+NAM+ GY + +A+ MR+E N ++V
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE------NIDNV 396
Query: 171 TMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM 230
T++ +++ C+ + + G HG G D ++ V N+ L MY KCG ++ A F +M
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 231 L-VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG 289
+RD +SWNA+++G A+ G + + L + M++ P TL +L+ CAN+ A +G
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLG 515
Query: 290 VEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXX 349
+ + + G+ + + A+++MY++C A VF + ++ W +
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRN 575
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
ELF + GV+PD F+ +L AC G + G YF M KY + P EH
Sbjct: 576 GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEH 635
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
Y C+++L + G L + + + M P + + AC+ ++ +L A
Sbjct: 636 YDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWA 687
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 193/449 (42%), Gaps = 52/449 (11%)
Query: 71 KSCAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPI 129
+SC+ +L + ++ +H++ P + + I Y KC AR +F+E
Sbjct: 69 RSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGG 128
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
S+NA+I+ + N + + +FRRM R DG + +F G++ C L L
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNR-DGVRATETSFA-----GVLKSCGLILDLRLLR 182
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNG 249
LH V +G ++ + S + +Y KC + AR++FDE++ +SWN +V Y + G
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMG 242
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
+ ++ +M + P T+ +V+ +C+ A VG + + ++ ++
Sbjct: 243 FNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVST 302
Query: 310 ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRP 369
++ +MY +C L AR VFD K + SWT+ A ELFD M P
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM------P 356
Query: 370 DRTV--FVTVLSACSHAGLTDKGLHYFDEMERKY-------------------GLQPGPE 408
+R + + +L HA D+ L + M ++ +Q G +
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 409 HY---------------SCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALL-GACKIH 452
+ + L+D+ G+ G L+ A + M D W ALL G ++
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 453 KNVELAELAFEHV-IELEPTNIGYYVLLS 480
++ E A FE + +E +P+ LL+
Sbjct: 477 RS-EQALSFFEGMQVEAKPSKYTLATLLA 504
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 11/271 (4%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +WN L ++ EAL M + C+ +S G
Sbjct: 356 PERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGK 415
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL--PISYNAMISGYSLN 141
Q H + R G + ++L+ MY KC A F + L +S+NA+++G +
Sbjct: 416 QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV 475
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGC-NLPNHLPTGTCLHGCAVTFGL 200
A+S F M+ E S T+ L++GC N+P L G +HG + G
Sbjct: 476 GRSEQALSFFEGMQVEAKPS-------KYTLATLLAGCANIPA-LNLGKAIHGFLIRDGY 527
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D+ + + + MY KC + A ++F E RDLI WN+++ G +NG + V EL+
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
++ + PD VT L +L +C G +G +
Sbjct: 588 LENEGVKPDHVTFLGILQACIREGHVELGFQ 618
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 42/406 (10%)
Query: 248 NGHAARVLELYHEMKLRRMSPDPVTLLAVLSSC----ANLGAQVVGVEVERKIEQCGFGS 303
G+ +E+ ++ + + D + LL + C A A+VV + + C G+
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV 363
NA+I MY+ C ++ A VF+ M + + + A++LF
Sbjct: 157 R----NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 364 RSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRL 423
G +P+ +F V S C+ G +G F M R+YG+ P EHY + +L +G L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 424 KEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIY 483
EA++ ++ M ++P VW L+ ++H +VEL + E V +L+ T +
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRL---------- 322
Query: 484 SDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSG----DRNHPQMKEIYRKV 539
D +S G++ + ++K+P Y FYS D +HPQM IY +
Sbjct: 323 -DKVSSAGLVATKA---SDFVKKEPSTRSEPY------FYSTFRPVDSSHPQMNIIYETL 372
Query: 540 AELENSVMEI-HRPDEKY------RVRSEELLNGNGVHSERLAIAFALLSTRPGTEITIM 592
L + + E+ + PD +Y + ++E + G + E +A+ +LL ++P + IT++
Sbjct: 373 MSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFG---YREEIAVVESLLKSKPRSAITLL 429
Query: 593 KNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
N+R+ DCH MKL+S I R I RDA +H F++GVC C + W
Sbjct: 430 TNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 16/185 (8%)
Query: 100 TRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDG 159
T++S++ Y P +A+ V ET + + + +AV + + +
Sbjct: 66 TQNSMVGQYKTTVSPSVAQNVTIETFD----------SLCIQGNWREAVEVLDYLENKG- 114
Query: 160 SSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGE 219
+ + + +LGL C P L +H C + D+ N+ + MY C
Sbjct: 115 -----YAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCS 169
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
V+ A ++F+EM + + M+ + NG+ ++L+ K P+ V S+
Sbjct: 170 VDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFST 229
Query: 280 CANLG 284
C G
Sbjct: 230 CTLTG 234
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 223/503 (44%), Gaps = 74/503 (14%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-ISYNAMISGYSLNS 142
QLH +V + G + +SL+ Y A +VFDE + IS+N+++SGY +
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD- 201
F + + LF + R D +F+F + ++ C + P G C+H V GL+
Sbjct: 136 RFQEGICLFLELHRSDVFPN-EFSFTAA-----LAACARLHLSPLGACIHSKLVKLGLEK 189
Query: 202 ADLAVMNSFLTMYVKC-------------------------------GEVELARQLFDEM 230
++ V N + MY KC G++EL F +M
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 231 LVRDLI-------------------------------SWNAMVSGYAQNGHAARVLELYH 259
D + SWN +++GY + + E +
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
+M + D +L VL++ A L G + + G S + +ALI+MY++CG
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCG 369
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG-VRPDRTVFVTVL 378
L A +F M K+++ W A++LF+++ + ++PDR F+ +L
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Query: 379 SACSHAGL-TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
+ CSH + + L YF+ M +Y ++P EH L+ +G+ G + +A +I+
Sbjct: 430 AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGY 489
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIG--YYVLLSNIYSDAKNSEGVLRV 495
DG W ALLGAC K+++ A+ +IEL + Y+++SN+Y+ + V ++
Sbjct: 490 DGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQI 549
Query: 496 RVMMRERKLRKDPGCSYVEYKGK 518
R +MRE + K+ G S+++ + K
Sbjct: 550 RKIMRESGVLKEVGSSWIDSRTK 572
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 237 SWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI 296
SW+ +V A+ G VL E+ PD L+ +L N G + ++ +
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 297 EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAV 356
+ GF SN L+N+L+ Y +L A VFD M D V+SW + +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 357 ELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY-SCLVD 415
LF E+ RS V P+ F L+AC+ L+ G ++ K GL+ G +CL+D
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKL-VKLGLEKGNVVVGNCLID 200
Query: 416 LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGY 475
+ G+ G + +A+ + + M+ K D W A++ +C + +EL L F H + P + Y
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG-LWFFHQMP-NPDTVTY 257
Query: 476 YVLL 479
L+
Sbjct: 258 NELI 261
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 19/245 (7%)
Query: 26 NP-TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQ 84
NP +++WN L + EA + M S + A L++ G
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSL 140
+HA + G S+LI MYSKC + A +F +P I +N MISGY+
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF---WTMPRKNLIVWNEMISGYAR 398
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
N +A+ LF ++++E +F F + +L + S C +P + G + +
Sbjct: 399 NGDSIEAIKLFNQLKQERFLKPDRFTF--LNLLAVCSHCEVPMEVMLGY-FEMMINEYRI 455
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEM-LVRDLISWNAMVSG-------YAQNGHAA 252
+ S + + GEV A+Q+ E D ++W A++ A AA
Sbjct: 456 KPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAA 515
Query: 253 RVLEL 257
+++EL
Sbjct: 516 KMIEL 520
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 177/360 (49%), Gaps = 7/360 (1%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+W + S++ +A+ ++ ML K+C+ G Q+H+ V
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAMISGYSLNSMFADAV 148
++ + D + +SL+ MY+KC R+VFD N +++ ++I+ ++ +A+
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 149 SLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMN 208
SLFR M+R N++T++ ++ C L G LH + ++ ++ + +
Sbjct: 371 SLFRIMKRR------HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 209 SFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSP 268
+ + +Y KCGE A + ++ RD++SW AM+SG + GH + L+ EM + P
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 269 DPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVF 328
+P T + L +CAN + ++G + ++ SN F+ +ALI+MYA+CG ++ A VF
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF 544
Query: 329 DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
D M +K++VSW A A++L M G D +F T+LS C L +
Sbjct: 545 DSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 193/415 (46%), Gaps = 19/415 (4%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNS 142
++HA ++ Y ++LIS + AR+VFD +++ AMI GY
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
+ +A +LF + ++F N + L++ C+ G +HG V G+
Sbjct: 163 LEDEAFALFEDYVKHG----IRFT-NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-G 216
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMK 262
+L V +S + Y +CGE+ A + FD M +D+ISW A++S ++ GH + + ++ M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 263 LRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLA 322
P+ T+ ++L +C+ A G +V + + ++ F+ +L++MYA+CG ++
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 323 RARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
R VFDGM +++ V+WT+ A+ LF M R + + V++L AC
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 383 HAG--LTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGA 440
G L K LH K ++ S LV L + G ++A ++++ + + D
Sbjct: 397 SVGALLLGKELH---AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVV 452
Query: 441 VWGALLGAC-KIHKNVELAELAFEHVIE-LEPTNIGYYVLLSNIYSDAKNSEGVL 493
W A++ C + E + E + E +EP Y S+ NSE +L
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY----SSALKACANSESLL 503
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 13/260 (5%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T W + +++ +EA+SL+R M R ++C + L G +LHA
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP----ISYNAMISGYSLNSM 143
+I+ + + Y S+L+ +Y KC +R F+ LP +S+ AMISG S
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCG---ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
++A+ + M +E G F ++S + C L G +H A ++
Sbjct: 467 ESEALDFLKEMIQE-GVEPNPFTYSSA-----LKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ V ++ + MY KCG V A ++FD M ++L+SW AM+ GYA+NG L+L + M+
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 264 RRMSPDPVTLLAVLSSCANL 283
D +LS+C ++
Sbjct: 581 EGFEVDDYIFATILSTCGDI 600
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 24 PVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGF 83
P +W + S EAL + M++ K+CA L G
Sbjct: 447 PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYSLN 141
+H+ + + + + S+LI MY+KC A RVFD NL +S+ AMI GY+ N
Sbjct: 507 SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNL-VSWKAMIMGYARN 565
Query: 142 SMFADAVSLFRRMRRE 157
+A+ L RM E
Sbjct: 566 GFCREALKLMYRMEAE 581
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 211/446 (47%), Gaps = 14/446 (3%)
Query: 82 GFQLHAHVIRTG-SQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-SYNAMISGYS 139
G Q+H + I +G S+ + +S++ MY + + A VF + + S+N +I S
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ A+ F MR ++ + T+ +VS C+ L G + G
Sbjct: 212 DSGNKEVALDQFWLMRE------MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMG 265
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
++ V+ + + M+ KC ++ + +LF E+ D + N+M+ Y+ + L L+
Sbjct: 266 FLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI 325
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVV--GVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ + PD T +VLSS + A ++ G +V + + GF + + +L+ MY +
Sbjct: 326 LAMTQSVRPDKFTFSSVLSS---MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFK 382
Query: 318 CGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMV-RSGVRPDRTVFVT 376
G++ A VF K ++ W ++ +F++++ ++PDR +
Sbjct: 383 TGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMG 442
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
+L AC +AG ++G+ F ME+ +G+ PG EHY+C+++LL R G + EA D+ + +
Sbjct: 443 ILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFE 502
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVR 496
P +W +L A + LAE + ++E EP + Y++L IY E +++R
Sbjct: 503 PSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLR 562
Query: 497 VMMRERKLRKDPGCSYVEYKGKVHVF 522
M E KL+ G S + + V F
Sbjct: 563 YAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
D + N L K G + A LFDEM RD++SWN M+SG G + ++ +
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 261 MKLRRMSPDPVT--LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
M+ + P T +LA L +C G Q+ G + + + N + N++++MY R
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSR----YNLVVWNSVMDMYRRL 182
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G A +VF M D+ VVSW A++ F M ++PD V+
Sbjct: 183 GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVV 242
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKPD 438
S CS KG + K G +D+ + RL +++ L + ++ K D
Sbjct: 243 SICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWD 300
Query: 439 GAVWGALLGACKIH 452
+ +++G+ H
Sbjct: 301 SVLCNSMIGSYSWH 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXX 351
V ++ + GF + N + +Y + G++ A +FD + DK+ ++W
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 352 XXXAVELFDEMVRSGVRPDRTV--FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
A++LFDEM P+R V + T++S G + G+ F +M+R + ++P
Sbjct: 86 LNNALDLFDEM------PERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRPTEFT 138
Query: 410 YSCLVDLLG--RAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
+S L L+ R G + I S + + VW +++ +++ + + + A +
Sbjct: 139 FSILASLVTCVRHGEQIHG-NAICSGVSRYNLVVWNSVM---DMYRRLGVFDYALSVFLT 194
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
+E ++ + L SD+ N E L +MRE +++ D
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 196/416 (47%), Gaps = 31/416 (7%)
Query: 242 VSGYAQ--NGHAARVLELYHEMKLRRMSPDPVTLLAVLSS------------CANLGAQV 287
VS YAQ N H + +E + + + + + ++ +L A L +V
Sbjct: 66 VSSYAQMVNNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEV 125
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXX 347
+E R + C + + +I MY+ C + A VF+ M ++ +W
Sbjct: 126 EALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLA 185
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A+++F + G +PD+ +F V AC G ++GL +F+ M R YG+
Sbjct: 186 KNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSM 245
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
E Y ++++L G L EA+D ++ M V+P +W L+ C + +EL + E + +
Sbjct: 246 EDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKK 305
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDR 527
L+ + + + + A +S + +++ + + +R DP K ++H F +GD
Sbjct: 306 LDASRMSKESNAGLVAAKASDS-AMEKLKELRYCQMIRDDP-------KKRMHEFRAGDT 357
Query: 528 NHPQMKEIYR--KVAELENSVMEIHR---PDEKYRVRSEELLNGNGVHSERLAIAFALLS 582
+H +R KV L+ + R + + E+LL S +LA A A+++
Sbjct: 358 SHLGTVSAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLL----FRSNKLAFAHAIIN 413
Query: 583 TRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRDGVCSCKDYW 638
+ +T+++N+R C+D H K++S I R I RD ++H +++GVCSCKDYW
Sbjct: 414 SEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 6/170 (3%)
Query: 172 MLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML 231
+LGL C L +H C D ++ + MY C + A +F+EM
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPL----DARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVG-V 290
R+ +W M+ A+NG R ++++ PD AV +C ++G G +
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 291 EVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM-VDKSVVSW 339
E G + +I M A CG+L A + M V+ SV W
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMW 280
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 167/358 (46%), Gaps = 48/358 (13%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNSMFADAVSLFRR 153
+ D + + +I+ ++K AR+ FD +S+NAM+SGY+ N DA+ LF
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT---------------CLHGCAV-- 196
M R + N T + ++S C+ P+ T C A+
Sbjct: 255 MLR------LGVRPNETTWVIVISACSFRAD-PSLTRSLVKLIDEKRVRLNCFVKTALLD 307
Query: 197 ----------------TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNA 240
G +L N+ ++ Y + G++ ARQLFD M R+++SWN+
Sbjct: 308 MHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNS 367
Query: 241 MVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQC 299
+++GYA NG AA +E + +M PD VT+++VLS+C ++ +G + I +
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 300 GFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELF 359
N +LI MYAR GNL A+ VFD M ++ VVS+ + L
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 360 DEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLL 417
+M G+ PDR + +VL+AC+ AGL +G F + P +HY+C+ DLL
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 191/449 (42%), Gaps = 88/449 (19%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-YNAMISGYSL 140
G A V + G DPY R+ ++ MY K AR+VFD+ S +N MISGY
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY-- 177
Query: 141 NSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL 200
++ +E+ C L + +P
Sbjct: 178 ----------WKWGNKEE-------------------ACKLFDMMP-------------- 194
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ D+ +T + K ++E AR+ FD M + ++SWNAM+SGYAQNG L L+++
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 261 MKLRRMSPDPVTLLAVLSSCA-------------------------------NLGAQVVG 289
M + P+ T + V+S+C+ ++ A+
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 290 VEVERKI-EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
++ R+I + G N NA+I+ Y R G+++ AR +FD M ++VVSW +
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 349 XXXXXXAVELFDEMVRSG-VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A+E F++M+ G +PD ++VLSAC H + G D + RK ++
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI-RKNQIKLND 433
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKN-VELAELAFEHVI 466
Y L+ + R G L EA + MK + D + L A + + VE L +
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 467 E-LEPTNIGYYVLLSNIYSDAKNSEGVLR 494
E +EP + Y +L+ A N G+L+
Sbjct: 493 EGIEPDRVTYTSVLT-----ACNRAGLLK 516
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 132/303 (43%), Gaps = 28/303 (9%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLT 81
R P +WN L ++ ++AL L+ MLR +C+ + P
Sbjct: 223 RMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNLPISYNAMISGYS 139
L + + + + +++L+ M++KC ARR+F+E T +++NAMISGY+
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYT 342
Query: 140 LNSMFADAVSLFRRMRRE--------------DGSSTVKFNF------------NSVTML 173
+ A LF M + +G + + F + VTM+
Sbjct: 343 RIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 174 GLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR 233
++S C L G C+ + + + S + MY + G + A+++FDEM R
Sbjct: 403 SVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 234 DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
D++S+N + + +A NG L L +MK + PD VT +VL++C G G +
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Query: 294 RKI 296
+ I
Sbjct: 523 KSI 525
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 148/372 (39%), Gaps = 62/372 (16%)
Query: 84 QLHAHVIRTGSQP-DPYTRSSLISMYSKCSLP-FLARRVFDETHNLPISY--NAMISGYS 139
Q+HA +I S P Y S +IS ++ P + R +FD P + N+M +S
Sbjct: 24 QIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSV-TFPNVFVVNSMFKYFS 82
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
M D + L+ + R G F+F V + + G G
Sbjct: 83 KMDMANDVLRLYEQ-RSRCGIMPDAFSFPVV----------IKSAGRFGILFQALVEKLG 131
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
D V N + MYVK VE AR++FD++ R WN M+SGY + G+ +L+
Sbjct: 132 FFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFD 191
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
M P+ VV V +I +A+
Sbjct: 192 ------MMPEN---------------DVVSWTV------------------MITGFAKVK 212
Query: 320 NLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+L AR FD M +KSVVSW A A+ LF++M+R GVRP+ T +V V+S
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 380 ACS---HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
ACS LT + DE + + L+D+ + ++ A + + +
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVK----TALLDMHAKCRDIQSARRIFNELGTQ 328
Query: 437 PDGAVWGALLGA 448
+ W A++
Sbjct: 329 RNLVTWNAMISG 340
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 56/69 (81%)
Query: 570 HSERLAIAFALLSTRPGTEITIMKNLRVCVDCHIFMKLVSKIVNRQFIIRDATRFHHFRD 629
HSERLAIAF +++T PGT I +MKNLR+C DCH F+K++S I +R+ I+RD RFHHFRD
Sbjct: 171 HSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRD 230
Query: 630 GVCSCKDYW 638
G CSC DYW
Sbjct: 231 GNCSCGDYW 239
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 173/404 (42%), Gaps = 23/404 (5%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
+S N ++ G+ DA++ + M +DG ++ FN+ LV+G H+
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT-----LVNGLCKAGHVKHA 314
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD----LISWNAMVSG 244
+ + G D D+ NS ++ K GEV+ A ++ D+M+ RD +++N ++S
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
+ EL + + + PD T +++ V +E+ ++ G +
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 305 PFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFD 360
F N LI+ G L A + M +SV+++ A E+FD
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 361 EMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRA 420
EM GV + + T++ + + D+M + G +P Y+ L+ R
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTHFCRG 553
Query: 421 GRLKEAMDLIKSMK---VKPDGAVWGALL-GACKIHKNVELAELAFEHVIELEPTNI--- 473
G +K+A D++++M +PD +G L+ G CK + VE+A I+++ N+
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR-VEVASKLLRS-IQMKGINLTPH 611
Query: 474 GYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKG 517
Y ++ ++ K +E + R M+ + + D + ++G
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 15/301 (4%)
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM-----LVRDLISWNAMVSGYAQNGH 250
V FG +N + + K G VE A EM D ++N +V+G + GH
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
+E+ M PD T +V+S LG VEV ++ N N
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 311 LINMYARCGNLARARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
LI+ + + A + + K ++ ++ + A+ELF+EM G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
PD + ++ + G D+ L+ +ME G Y+ L+D +A + +EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREA 489
Query: 427 MDLIKSMK---VKPDGAVWGALL-GACKIHKNVELAELAFEHVIE-LEPTNIGYYVLLSN 481
++ M+ V + + L+ G CK + + A+L + ++E +P Y LL++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 482 I 482
Sbjct: 550 F 550
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 145/326 (44%), Gaps = 16/326 (4%)
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARV 254
G++ L N + V V+ A ++F+ M + D++++N M+ GY + G +
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+E +M+ R D +T + ++ +C V + +++++ G P + +I
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 315 YARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ G L VF+ M+ K +V +T A+ L M+ G +PD
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+ V++ G ++ L YF R GL YS L+D LG+AGR+ EA L
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 431 KSMKVKP---DGAVWGALLGACKIHKNVELAELAFEHVIELE---PTNIGYYVLLSNIYS 484
+ M K D + AL+ A H+ V+ A F+ + E E T Y +LLS ++
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 485 DAKNSEGVLRVRVMMRERKLRKDPGC 510
+ +N E L++ MM ++ + C
Sbjct: 516 EHRNEEA-LKLWDMMIDKGITPTAAC 540
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 24/350 (6%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLA----RRVFDETHNL-PISYNAMISGYSLNSMFADAVS 149
+PD T +++I Y K A R + H I+Y MI +S F V+
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
L++ M E G F+ V + G L G + + G ++A+
Sbjct: 314 LYQEMD-EKGIQVPPHAFSLV-----IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 210 FLTMYVKCGEVE----LARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
+ Y K G VE L ++ DE D+++++ +V+G +NG L+ +H +
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
++ + + +++ G + ++ + G + + NALI+ + + + A
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 326 AVFDGM-----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
A+F M D++V ++T A++L+D M+ G+ P F + +
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547
Query: 381 CSHAGLTDKGLHYFDEME-RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL 429
+G + DE+ L E +++ L +AGR+KEA L
Sbjct: 548 LCLSGKVARACKILDELAPMGVILDAACED---MINTLCKAGRIKEACKL 594
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 153/345 (44%), Gaps = 23/345 (6%)
Query: 99 YTRSSLISMYSKCSLPFLARRVFDETH------NLPISYNAMISGYSLNSM-FADAVSLF 151
Y S+LIS Y + L A VF+ NL ++YNA+I M F F
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNL-VTYNAVIDACGKGGMEFKQVAKFF 327
Query: 152 RRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFL 211
M+R +G + FNS L++ C+ L ++ D+ N+ L
Sbjct: 328 DEMQR-NGVQPDRITFNS-----LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 212 TMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMS 267
K G+++LA ++ +M V+ +++S++ ++ G+A+ G L L+ EM+ ++
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 268 PDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAV 327
D V+ +LS +G +++ R++ G + NAL+ Y + G + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 328 FDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
F M V ++++++ A+E+F E +G+R D ++ ++ A
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
GL + DEM ++ G+ P Y+ ++D GR+ + + D
Sbjct: 562 NGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 34/369 (9%)
Query: 102 SSLISMYSKCSLPFLARRVFDETH-----NLPISYNAMISGYSLNSMFADAVSLFRRMRR 156
S++IS + +A+R+F+ N +++A+IS Y + + +A+S+F M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 157 EDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF------GLDADLAVMNSF 210
N VT ++ C G A F G+ D NS
Sbjct: 297 ------YGLRPNLVTYNAVIDACG-----KGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 211 LTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
L + + G E AR LFDEM R D+ S+N ++ + G E+ +M ++R+
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
P+ V+ V+ A G + + ++ G + N L+++Y + G A
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 327 VFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
+ M + K VV++ A ++F EM R V P+ + T++ S
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDG 439
GL + + F E + GL+ YS L+D L + G + A+ LI M + P+
Sbjct: 526 KGGLYKEAMEIFREF-KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 440 AVWGALLGA 448
+ +++ A
Sbjct: 585 VTYNSIIDA 593
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 46/312 (14%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMISGYSLNSMFA 145
R G QPD T +SL+++ S+ L AR +FDE N I SYN ++
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
A + +M + N V+ ++ G L G G+ D
Sbjct: 392 LAFEILAQM------PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 206 VMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
N+ L++Y K G E A + EM + +D++++NA++ GY + G V +++ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
K + P+ +T ++ + G +E+ R+ + G ++ L +ALI+ A C N
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID--ALCKN- 562
Query: 322 ARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
G+V AV L DEM + G+ P+ + +++ A
Sbjct: 563 --------GLVGS--------------------AVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 382 SHAGLTDKGLHY 393
+ D+ Y
Sbjct: 595 GRSATMDRSADY 606
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 12/243 (4%)
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD- 333
A++S+ G + + G+G+ + +ALI+ Y R G A +VF+ M +
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 334 ---KSVVSWTAXXXXXXXXXXXXXAV-ELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
++V++ A V + FDEM R+GV+PDR F ++L+ CS GL +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALL 446
+ FDEM + ++ Y+ L+D + + G++ A +++ M VK P+ + ++
Sbjct: 358 ARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 447 -GACKIHKNVELAELAFE-HVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
G K + E L E + + + Y LLS IY+ SE L + M +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS-IYTKVGRSEEALDILREMASVGI 475
Query: 505 RKD 507
+KD
Sbjct: 476 KKD 478
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 55/439 (12%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARR-------VFDETHNLPIS---- 130
GF LH+H R +P T +SL S C F R + + HNL +
Sbjct: 15 GFHLHSHRHRL-QISNPRTAASL----SLCGFCFWIRAFSSYRKILRNGLHNLQFNDALD 69
Query: 131 -YNAMISGYSLNSM--FADAVSLFRRMRREDGSSTVKFNFNSVTMLG---LVSGCNLPNH 184
+ M+ L S+ F +S+ +M R D ++ F + +LG L+ CN+ H
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL---FEQMQILGIPPLLCTCNIVMH 126
Query: 185 LPT-------GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR---- 233
+C G + G + DL S L Y +E A LFD++L
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 234 DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG-----AQVV 288
+++++ ++ +N H +EL+++M P+ VT A+++ +G A ++
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV----VSWTAXXX 344
++R+IE N ALI+ + + G L A+ +++ M+ SV ++ +
Sbjct: 247 RDMMKRRIE-----PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 345 XXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQ 404
A ++F M R+G P+ ++ T++ + + G+ F EM +K G+
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVV 360
Query: 405 PGPEHYSCLVD---LLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA 461
Y+ L+ L+GR +E + + S + PD + LL + VE A +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 462 FEHVIELE-PTNIGYYVLL 479
FE++ + E NI Y ++
Sbjct: 421 FEYMRKREMDINIVTYTII 439
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 164/401 (40%), Gaps = 85/401 (21%)
Query: 93 GSQPDPYTRSSLISMYSKC---SLPFLARRVFDE---THNLPISYNAMISGYSLNSMFAD 146
G P T LI++Y+K S RV E HNL +Y+ MI+G+ +A+
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK-TYSMMINGFVKLKDWAN 537
Query: 147 AVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPN---------------HLPTGTC- 190
A ++F M +E V N ++ C + N H PT
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAF-----CGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 191 ---LHGCAVTFGLDADLAVM---------------NSFLTMYVKCGEVELARQLFDEMLV 232
+HG A + + L V N + V+ ++E A ++ DEM +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 233 RDLI----SWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVV 288
+ ++ ++ GYA G + E + ++ + D T A+L +C G
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 289 GVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXX 348
+ V +++ N F+ N LI+ +AR G++ W
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDV-----------------W--------- 746
Query: 349 XXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPE 408
A +L +M + GV+PD + + +SACS AG ++ +EME G++P +
Sbjct: 747 -----EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME-ALGVKPNIK 800
Query: 409 HYSCLVDLLGRAGRLKEAM---DLIKSMKVKPDGAVWGALL 446
Y+ L+ RA ++A+ + +K+M +KPD AV+ LL
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 167/411 (40%), Gaps = 32/411 (7%)
Query: 116 LARRVFDETHNLPIS-YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLG 174
L R + +E + PI+ Y+ M+ GY++ + + +F+R++ + TV
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV----------- 484
Query: 175 LVSGCNLPNHLPTGTCLHGCAVTF-----GLDADLAVMNSFLTMYVKCGEVELARQLFDE 229
+ GC + + G V+ G+ +L + + +VK + A +F++
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 230 MLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA 285
M+ D+I +N ++S + G+ R ++ EM+ R P T + ++ A G
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTA 341
+EV + +CG N LIN + +A + D M V + ++T
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 342 XXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
A E F + G+ D + +L AC +G L EM +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR- 723
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELA 458
+ Y+ L+D R G + EA DLI+ MK VKPD + + + AC ++ A
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 459 ELAFEHV--IELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
E + + ++P NI Y L ++ A E L M+ ++ D
Sbjct: 784 TQTIEEMEALGVKP-NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 16/297 (5%)
Query: 198 FGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAAR 253
G+ L N + ++ +E+A+ +F ++ + D+ ++N ++ Y ++G
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI-EQCGFGSNPFLTNALI 312
+ ELY EM + +T V+S G +++ + F LI
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 313 NMYARCGNLARARAVFDGMVD----KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
+ ++ G L A+ +F+GM+D + + A LF MV+ GVR
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
PD + ++ G D+GLHYF E+ ++ GL P Y+ +++ LG++ RL+EA+
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 429 LIKSMK----VKPDGAVWGALLGACKIHKNVELAELAFEHV--IELEPTNIGYYVLL 479
L MK + PD + +L+ I VE A + + LEP + L+
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 228 DEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQV 287
D+ ++ +L ++N ++ G + LEL+ M+ + P T + + G V
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 288 VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVV----SWTAXX 343
+E K++ G N NA + A+ G A+ +F G+ D +V ++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 344 XXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGL 403
A++L EM+ +G PD V ++++ A D+ F M ++ L
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKL 569
Query: 404 QPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALLGACKIHKNVELA 458
+P Y+ L+ LG+ G+++EA++L + M K P+ + L + V LA
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 28/318 (8%)
Query: 208 NSFLTMY----VKCGEVELA---RQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
N++LT++ VK G + R++ + V + S+N ++ ++ +E+Y
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 261 MKLRRMSPDPVTLLAVLSSCANLGAQ-----VVGVEVERKIEQCGFGSNPFLTNALINMY 315
M L P T +++ LG + V+G+ +++E G N + I +
Sbjct: 214 MILEGFRPSLQTYSSLM---VGLGKRRDIDSVMGLL--KEMETLGLKPNVYTFTICIRVL 268
Query: 316 ARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
R G + A + M D+ VV++T A E+F++M +PDR
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
++T+L S D ++ EME+ G P ++ LVD L +AG EA D +
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 432 SMK---VKPDGAVWGALL-GACKIHKNVELAEL-AFEHVIELEPTNIGYYVLLSNIYSDA 486
M+ + P+ + L+ G ++H+ + EL + ++PT Y V + + Y +
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI-DYYGKS 446
Query: 487 KNSEGVLRVRVMMRERKL 504
+S L M+ + +
Sbjct: 447 GDSVSALETFEKMKTKGI 464
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 24/295 (8%)
Query: 210 FLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
F+ Y K G+ A + F++M + ++++ NA + A+ G ++++ +K
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+ PD VT ++ + +G +++ ++ + G + + N+LIN + + A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 326 AVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA- 380
+F M + +VV++ A+ELF+ MV+ G P+ F T+
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK--VKPD 438
C + +T F M+ G P Y+ ++ L + G++KEAM MK V PD
Sbjct: 619 CKNDEVTLALKMLFKMMDM--GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 676
Query: 439 GAVWGALL-GACKIHKNVELAELAFEHVIEL------EPTNIGYYVLLSNIYSDA 486
LL G K L E A++ + +P N+ + L+ +I ++A
Sbjct: 677 FVTLCTLLPGVVK----ASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEA 727
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 112/290 (38%), Gaps = 50/290 (17%)
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNL---PISYNAMISGYSLNS 142
V TG PD T + L+ Y K ++ E TH I++N +ISG
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDA 202
DA+ L+ D S F+ + T L+ G + L L + +G
Sbjct: 870 NVDDALDLYY-----DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEML---VR-------------------------- 233
+ A+ N + + K GE + A LF M+ VR
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 234 ----------DLISWNAMVSGYAQNGHAARVLELYHEMKLRR-MSPDPVTLLAVLSSCAN 282
D++ +N +++G ++ L L++EMK R ++PD T +++ +
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
G ++ +I++ G N F NALI Y+ G A AV+ MV
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 164/390 (42%), Gaps = 23/390 (5%)
Query: 73 CAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-----HNL 127
C SL Q+ + G D T ++L+ +Y K P A +V +E
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 128 PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
++YN++IS Y+ + M +A+ L +M E G+ F + + L+SG + +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTT-----LLSGFERAGKVES 402
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVS 243
+ G ++ N+F+ MY G+ ++FDE+ L D+++WN +++
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 244 GYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGS 303
+ QNG + V ++ EMK P+ T ++S+ + G+ + V R++ G
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 304 NPFLTNALINMYARCGNLARARAVF----DGMVDKSVVSWTAXXXXXXXXXXXXXAVELF 359
+ N ++ AR G ++ V DG + +++ + L
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 360 DEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGR 419
+E+ + P + T++ CS L + F E++ + G P + +V + GR
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGR 641
Query: 420 AGRLKEA---MDLIKSMKVKPDGAVWGALL 446
+ +A +D +K P A + +L+
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 154/373 (41%), Gaps = 24/373 (6%)
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNSMFADA 147
V+R+ +P+ + L S+ S+ PF D+ + A + G + F A
Sbjct: 101 QVLRSLIEPN-FDSGQLDSVLSELFEPFK-----DKPESTSSELLAFLKGLGFHKKFDLA 154
Query: 148 VSLFRR-MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAV 206
+ F M+++D S + NSV + ++S + + + G D+
Sbjct: 155 LRAFDWFMKQKDYQSMLD---NSVVAI-IISMLGKEGRVSSAANMFNGLQEDGFSLDVYS 210
Query: 207 MNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHA-ARVLELYHEM 261
S ++ + G A +F +M LI++N +++ + + G ++ L +M
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
K ++PD T +++ C +V +++ GF + NAL+++Y +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 322 ARARAVFDGMV----DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTV 377
A V + MV S+V++ + A+EL ++M G +PD + T+
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 378 LSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV-- 435
LS AG + + F+EM R G +P ++ + + G G+ E M + + V
Sbjct: 391 LSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 436 -KPDGAVWGALLG 447
PD W LL
Sbjct: 450 LSPDIVTWNTLLA 462
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 160/390 (41%), Gaps = 56/390 (14%)
Query: 93 GSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-----PISYNAMISGYSLNSMFADA 147
G PD YT ++LI+ + SL A +VF+E ++YNA++ Y + +A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+ + M S ++ VT L+S L L G D+
Sbjct: 334 MKVLNEMVLNGFSPSI------VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 208 NSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ L+ + + G+VE A +F+EM ++ ++NA + Y G +++++ E+ +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 264 RRMSPDPVT---LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGN 320
+SPD VT LLAV + ++V GV E K + GF N LI+ Y+RCG+
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNG-MDSEVSGVFKEMK--RAGFVPERETFNTLISAYSRCGS 504
Query: 321 LARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
+A V+ M+D +GV PD + + TVL+A
Sbjct: 505 FEQAMTVYRRMLD-------------------------------AGVTPDLSTYNTVLAA 533
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRA---GRLKEAMDLIKSMKVKP 437
+ G+ ++ EME +P Y L+ G + + + S ++P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGR-CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Query: 438 DGAVWGALLGACKIHKNVELAELAFEHVIE 467
+ L+ C + AE AF + E
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/504 (17%), Positives = 181/504 (35%), Gaps = 122/504 (24%)
Query: 30 AWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHV 89
+N L K + KEA+ + M+ + + A + +L +
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 90 IRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMISGYSLNSMF 144
G++PD +T ++L+S + + A +F+E N ++NA I Y F
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
+ + +F ++ C L + T L G+D+++
Sbjct: 436 TEMMKIFDE----------------------INVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 205 A----------------VMNSFLTMYVKCGEVELA----RQLFDEMLVRDLISWNAMVSG 244
+ N+ ++ Y +CG E A R++ D + DL ++N +++
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCAN---------LGAQVV-GV---- 290
A+ G + ++ EM+ R P+ +T ++L + AN L +V GV
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 291 ------------------EVER---KIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
E ER ++++ GF + N+++++Y R +A+A V D
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 330 GMVDK---------------------------------------SVVSWTAXXXXXXXXX 350
M ++ ++S+
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT 713
Query: 351 XXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHY 410
A +F EM SG+ PD + T + + + + ++ + M K+G +P Y
Sbjct: 714 RMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTY 772
Query: 411 SCLVDLLGRAGRLKEAMDLIKSMK 434
+ +VD + R EA ++ ++
Sbjct: 773 NSIVDGYCKLNRKDEAKLFVEDLR 796
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 173/440 (39%), Gaps = 61/440 (13%)
Query: 43 QYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHAHVIRTGSQPDPYTRS 102
Q+ EAL L+ HM+ S A + L H+ G D YT +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 103 SLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFADAVSLFRRMRRE 157
L++ + + S P+LA + L +++ ++I+G+ L + +A+S+ +M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM--- 168
Query: 158 DGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKC 217
V G+ D+ + + + K
Sbjct: 169 --------------------------------------VEMGIKPDVVMYTTIIDSLCKN 190
Query: 218 GEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
G V A LFD+M + D++ + ++V+G +G L M R++ PD +T
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
A++ + G + E+ ++ + N F +LIN + G + AR +F M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 334 K----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
K VV++T+ A+++F EM + G+ + + T++ G +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK------VKPDGAVWG 443
F M + G+ P Y+ L+ L G++K+A+ + + M+ V P+ +
Sbjct: 371 AQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 444 ALLGACKIHKNVELAELAFE 463
LL + +E A + FE
Sbjct: 430 VLLHGLCYNGKLEKALMVFE 449
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 13/259 (5%)
Query: 203 DLAVMNSFLTMYVKCGEVELARQLFDEML----VRDLISWNAMVSGYAQNGHAAR-VLEL 257
D+ + L Y + G+ E A LF+ M L+++N ++ + + G + R +L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
EM+ + + D T VLS+CA G E +++ CG+ NAL+ ++ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 318 CGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
G A +V M + S V++ A + + M + GV P+
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 374 FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
+ TV+ A AG D+ L F M ++ G P Y+ ++ LLG+ R E + ++ M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 434 K---VKPDGAVWGALLGAC 449
K P+ A W +L C
Sbjct: 448 KSNGCSPNRATWNTMLALC 466
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 180/434 (41%), Gaps = 63/434 (14%)
Query: 93 GSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-----PISYNAMISGYSLNSMFADA 147
G + D +T S+++S ++ L A+ F E + ++YNA++ + ++ +A
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
+S+ + M E+ S +SVT LV+ + G+ +
Sbjct: 336 LSVLKEM--EENSCPA----DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 208 NSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ + Y K G+ + A +LF M V + ++NA++S + + ++++ +MK
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
SP+ T +L+ C N G V R+++ CGF + N LI+ Y RCG+
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS--- 506
Query: 324 ARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSH 383
VD S +++ EM R+G T + +L+A +
Sbjct: 507 -------EVDAS---------------------KMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 384 AGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGR---LKEAMDLIKSMKVKPDGA 440
G G + +M+ K G +P YS ++ + G ++ + IK ++ P
Sbjct: 539 KGDWRSGENVISDMKSK-GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 441 VWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLS-----NIYSDAKNSEGVL 493
+ LL A + + +E AF + +P + + +LS N+Y A EG+L
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA---EGIL 654
Query: 494 RVRVMMRERKLRKD 507
+RE L D
Sbjct: 655 ES---IREDGLSPD 665
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 154/396 (38%), Gaps = 36/396 (9%)
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
+Y ++ YS + A+ LF RM +E G S +N + + G + L
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERM-KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGY 245
+ + GL D ++ L+ + G + A++ F E+ +++NA++ +
Sbjct: 271 EMR----SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 246 AQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ G L + EM+ D VT ++++ G V + + G N
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVELFDE 361
+I+ Y + G A +F M + V ++ A +++ +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 362 MVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAG 421
M +G P+R + T+L+ C + G+ F EM + G +P + ++ L+ GR G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCG 505
Query: 422 RLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELA-------FEHVIE------L 468
+A + G + A AC N L LA E+VI
Sbjct: 506 SEVDASKMY--------GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 469 EPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKL 504
+PT Y ++L Y+ N G+ R+ ++E ++
Sbjct: 558 KPTETSYSLML-QCYAKGGNYLGIERIENRIKEGQI 592
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 174/438 (39%), Gaps = 55/438 (12%)
Query: 28 TTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPLTGFQLHA 87
T +N L K Y EALS+ + M +S + +
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 88 HVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVF---DETHNLP--ISYNAMISGYSLNS 142
+ + G P+ T +++I Y K A ++F E +P +YNA++S S
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP-TGTCLHGCAVTFGLD 201
+ + + M+ +G S + +N TML L + + + C G +
Sbjct: 436 RSNEMIKMLCDMK-SNGCSPNRATWN--TMLALCGNKGMDKFVNRVFREMKSC----GFE 488
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD----LISWNAMVSGYAQNGHAARVLEL 257
D N+ ++ Y +CG A +++ EM + ++NA+++ A+ G +
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV 548
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE-VERKIEQCGFGSNPFLTNALINMYA 316
+MK + P T +++ C G +G+E +E +I++ + L L+
Sbjct: 549 ISDMKSKGFKPTE-TSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 317 RCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
+C LA + F LF + G +PD +F +
Sbjct: 608 KCRALAGSERAFT----------------------------LFK---KHGYKPDMVIFNS 636
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM--- 433
+LS + + D+ + + R+ GL P Y+ L+D+ R G +A +++K++
Sbjct: 637 MLSIFTRNNMYDQAEGILESI-REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 434 KVKPDGAVWGALL-GACK 450
++KPD + ++ G C+
Sbjct: 696 QLKPDLVSYNTVIKGFCR 713
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 171/424 (40%), Gaps = 51/424 (12%)
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN---LP--ISYNAMISGYSLNSM 143
++ + P+ +T + LI + +A +FD+ LP ++YN +I GY
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG--CAVTF--- 198
D L R M + GL N + G C G V+F
Sbjct: 256 IDDGFKLLRSM----------------ALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 199 -----GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVSGYAQNG 249
G D N+ + Y K G A + EML L I++ +++ + G
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
+ R +E +M++R + P+ T ++ + G V R++ GF + N
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 310 ALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
ALIN + G + A AV + M +K VVS++ A+ + EMV
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
G++PD + +++ T + ++EM R GL P Y+ L++ G L++
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEK 538
Query: 426 AMDLIKSM---KVKPDGAVWGALL-GACKIHKNVE----LAELAFEHVIELEPTNIGYYV 477
A+ L M V PD + L+ G K + E L +L +E + P+++ Y+
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV---PSDVTYHT 595
Query: 478 LLSN 481
L+ N
Sbjct: 596 LIEN 599
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 144/373 (38%), Gaps = 62/373 (16%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMISGYS 139
+HA ++R G P T +SLI K A D+ + +Y ++ G+S
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+A + R M ++G S +N++ ++G VT
Sbjct: 392 QKGYMNEAYRVLREM-NDNGFSPSVVTYNAL--------------------INGHCVTGK 430
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYH 259
++ +AV+ + ++ L D++S++ ++SG+ ++ L +
Sbjct: 431 MEDAIAVL----------------EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
EM + + PD +T +++ ++ ++ + G + F ALIN Y G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 320 NLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
+L +A + + MV+K VV+++ A L ++ P +
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 376 TVLSACSH----------AGLTDKGL-----HYFDEMERKYGLQPGPEHYSCLVDLLGRA 420
T++ CS+ G KG+ F+ M K +P Y+ ++ RA
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK-NHKPDGTAYNIMIHGHCRA 653
Query: 421 GRLKEAMDLIKSM 433
G +++A L K M
Sbjct: 654 GDIRKAYTLYKEM 666
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 150/374 (40%), Gaps = 25/374 (6%)
Query: 96 PDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-----YNAMISGYSLNSMFADAVSL 150
PD T S+LIS Y K A R+FDE + + Y ++ Y A+ L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 151 FRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSF 210
F M+R S TV T L+ G + + + GL D+ +N+
Sbjct: 291 FEEMKRAGCSPTV------YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNL 344
Query: 211 LTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSG-YAQNGHAARVLELYHEMKLRR 265
+ + K G VE +F EM ++S+N ++ + H + V + +MK
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+SP T ++ + + ++++ GF P +LIN + A
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 326 AVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
+F + + S + AV+LF+EM G PD + ++S
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPD 438
AG+ ++ +ME G + ++ +++ R G + A+++ +++K +KPD
Sbjct: 525 VKAGMINEANSLLRKMEEN-GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 439 GAVWGALLGACKIH 452
G + LLG C H
Sbjct: 584 GVTYNTLLG-CFAH 596
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 160/419 (38%), Gaps = 51/419 (12%)
Query: 19 EPKRHPVNPTTAWNLRLMELS-KQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILS 77
E K + + PT L+ + K + ++AL L+ M R+ K
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 78 LPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-----HNLPISYN 132
+ + ++R G PD ++L+++ K VF E +SYN
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 133 AMISG-YSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCL 191
+I + + ++ S F +M+ D S +F ++ L+ G N + L
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMK-ADSVSPSEFTYSI-----LIDGYCKTNRVEKALLL 431
Query: 192 HGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML-----VRDLISWNAMVSGYA 246
G A S + K E A +LF E+ V + + M+ +
Sbjct: 432 LEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMIKHFG 490
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF 306
+ G + ++L++EMK + PD A++S G + RK+E+ G ++
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 307 LTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
N ++N +AR G RA +E+F+ + SG
Sbjct: 551 SHNIILNGFARTGVPRRA-------------------------------IEMFETIKHSG 579
Query: 367 VRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
++PD + T+L +HAG+ ++ EM+ K G + YS ++D +G K+
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK-GFEYDAITYSSILDAVGNVDHEKD 637
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
+SP ++ L A + ++ + V + K +C S+ + N++I M + G +
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTY--NSVILMLMQEGQHEKVH 217
Query: 326 AVFDGMVDK-----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA 380
V+ M ++ ++++A A+ LFDEM + ++P ++ T+L
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 381 CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
G +K L F+EM+R G P Y+ L+ LG+AGR+ EA K M
Sbjct: 278 YFKVGKVEKALDLFEEMKRA-GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 104/276 (37%), Gaps = 48/276 (17%)
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVR-----DLISWNAMVSGYAQNGHAARVLELYH 259
+ NS + M ++ G+ E +++ EM D I+++A++S Y + G + L+
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 260 EMKLRRMSPDP---VTLLAVLSSCANLGAQVVGVEVERKI-------------------- 296
EMK M P TLL + + + E ++
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 297 ---EQCGF-------GSNP---FLTNALINMYARCGNLARARAVFDGM----VDKSVVSW 339
E GF G P FL N L+N+ + G + VF M +VVS+
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNN-LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376
Query: 340 TAXXXXXXXXXXXXXAV-ELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEME 398
V FD+M V P + ++ +K L +EM+
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436
Query: 399 RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
K G P P Y L++ LG+A R + A +L K +K
Sbjct: 437 EK-GFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGH-----AARVLE 256
V N+ + +Y + G+ A++L D M R DLIS+N +++ ++G A +L+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
+ LR PD +T +LS+C+ V+V +E + + NA+I++Y
Sbjct: 287 MVRNSGLR---PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 317 RCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
RCG A A +F + K V++ + E++ +M + G D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
+ T++ G D L + +M+ G P Y+ L+D LG+A R EA L+
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 433 M---KVKPDGAVWGALL-GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLL 479
M +KP + AL+ G K K E AE F ++ +P N+ Y V+L
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREE-AEDTFSCMLRSGTKPDNLAYSVML 515
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 137/348 (39%), Gaps = 49/348 (14%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
YNAM+ YS + F+ A L MR+ G +FN++ L SG PN
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQR-GCVPDLISFNTLINARLKSGGLTPN---LAVE 283
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYA 246
L GL D N+ L+ + ++ A ++F++M DL ++NAM+S Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF 306
+ G AA L+ E++L+ PD VT ++L + A EV +++++ GFG +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 307 LTNALINMYARCGNLARARAVFDGM----------------------------------- 331
N +I+MY + G L A ++ M
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 332 -----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGL 386
+ ++ +++A A + F M+RSG +PD + +L
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 387 TDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK 434
T K + +M G P Y ++ L + R + I+ M+
Sbjct: 524 TRKAWGLYRDMISD-GHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 144/366 (39%), Gaps = 46/366 (12%)
Query: 167 FNSVTMLGLVSGCNLPN-HLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQ 225
F S TM + C + N H + + G +A +V S + +Y K G E A Q
Sbjct: 678 FGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQ 737
Query: 226 LFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGA 285
+ ++ + +A + ++E Y + KL + +
Sbjct: 738 VVNQAETKGF--------HFACSPMYTDIIEAYGKQKLWQKAE----------------- 772
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV----DKSVVSWTA 341
VVG + Q G + N+L++ YA+CG RARA+F+ M+ +V S
Sbjct: 773 SVVG-----NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINI 827
Query: 342 XXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKY 401
+ +E+ G + ++ + +L A + AG + + M +
Sbjct: 828 LLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM-KAA 886
Query: 402 GLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELA 458
G P Y +++LL + R+++A ++ M+ K + A+W ++L ++ +
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKT 946
Query: 459 ELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYK 516
++ + E LEP Y L+ D + EG L +M + R L DP YK
Sbjct: 947 VQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL---LMQQMRNLGLDPKLD--TYK 1001
Query: 517 GKVHVF 522
+ F
Sbjct: 1002 SLISAF 1007
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 181/430 (42%), Gaps = 68/430 (15%)
Query: 93 GSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFADA 147
G D YT S I+ + + S LA V + L ++ +++++GY + +DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
V+L +M E G F F + L+ G L N L V G DL
Sbjct: 173 VALVDQMV-EMGYKPDTFTFTT-----LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 208 NSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ + K G+++LA L +M + D++ +N ++ G + H L L+ EM
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 264 RRMSPDPVTLLAVLSSCANLG-----AQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
+ + PD T +++S N G ++++ +ERKI N +ALI+ + +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN-----PNVVTFSALIDAFVKE 341
Query: 319 GNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
G L A +L+DEM++ + PD + +++
Sbjct: 342 GKLVEAE-------------------------------KLYDEMIKRSIDPDIFTYSSLI 370
Query: 379 SA-CSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP 437
+ C H L D+ H F+ M K P YS L+ +A R++E M+L + M +
Sbjct: 371 NGFCMHDRL-DEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQR- 427
Query: 438 DGAVWGALLGACKIH-----KNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSE 490
G V + IH ++ + A++ F+ ++ + P + Y +LL + + K ++
Sbjct: 428 -GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 491 GVLRVRVMMR 500
++ + R
Sbjct: 487 AMVVFEYLQR 496
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 150/371 (40%), Gaps = 55/371 (14%)
Query: 219 EVELARQLFDEML----VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLL 274
+V+ A LF +M+ ++ +N ++S A+ V+ L +M+ +S D T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY- 121
Query: 275 AVLSSCANLGAQV-VGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
++ +C +Q+ + + V K+ + G+ + ++L+N Y ++ A A+ D MV+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 334 ----KSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
++T AV L D+MV+ G +PD + TV++ G D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 390 GLHYFDEMER------------------KY----------------GLQPGPEHYSCLVD 415
L +ME+ KY G++P YS L+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 416 LLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEP 470
L GR +A L+ M K+ P+ + AL+ A + AE ++ +I+ ++P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 471 TNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHP 530
Y L++ + E M E + KD + V Y + F R
Sbjct: 362 DIFTYSSLINGFCMHDRLDEA-----KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 531 QMKEIYRKVAE 541
M E++R++++
Sbjct: 417 GM-ELFREMSQ 426
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 128/321 (39%), Gaps = 20/321 (6%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMISGY 138
+L + +I P+ T S+LI + K A +++DE I +Y+++I+G+
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
++ +A +F M +D N VT L+ G + G L
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFP------NVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLV----RDLISWNAMVSGYAQNGHAARV 254
GL + + + + + + + A+ +F +M+ +++++N ++ G +NG A+
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+ ++ ++ M PD T ++ G G E+ + G N N +I+
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 315 YARCGNLARARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ R G+ A ++ M + + ++ + EL EM G D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Query: 371 RTVFVTVLSACSHAGLTDKGL 391
+ + +++ H G DK
Sbjct: 608 AST-IGLVTNMLHDGRLDKSF 627
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 225 QLFDEMLVRD-----LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+L DEM VRD +++N ++ Y + + + ++++M+ PD VT ++
Sbjct: 385 KLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----S 335
A G + +++ ++++ G + F + +IN + G+L A +F MVD+ +
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+V++ A++L+ +M +G PD+ + V+ H G ++ F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA-CKI 451
EM++K + P Y LVDL G+AG +++A ++M ++P+ +LL ++
Sbjct: 564 EMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 452 HKNVELAELAFEHV-IELEPTNIGYYVLLS 480
+K E EL + + L P+ Y +LLS
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++YN +I Y + +A+++F +M+ E G + + ++ + +G L
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAG-----FLDIA 453
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSG 244
++ GL D + + K G + A +LF EM+ + +L+++N M+
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVT---LLAVLSSCANLG-AQVVGVEVERKIEQCG 300
+A+ + L+LY +M+ PD VT ++ VL C L A+ V E+++K
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK----N 569
Query: 301 FGSNPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAV 356
+ + + L++++ + GN+ +A + M+ +V + + A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 357 ELFDEMVRSGVRPDRTVFVTVLSACS 382
EL M+ G+RP + +LS C+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 225 QLFDEMLVRD-----LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+L DEM VRD +++N ++ Y + + + ++++M+ PD VT ++
Sbjct: 385 KLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----S 335
A G + +++ ++++ G + F + +IN + G+L A +F MVD+ +
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+V++ A++L+ +M +G PD+ + V+ H G ++ F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA-CKI 451
EM++K + P Y LVDL G+AG +++A ++M ++P+ +LL ++
Sbjct: 564 EMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 452 HKNVELAELAFEHV-IELEPTNIGYYVLLS 480
+K E EL + + L P+ Y +LLS
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++YN +I Y + +A+++F +M+ E G + + ++ + +G L
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAG-----FLDIA 453
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSG 244
++ GL D + + K G + A +LF EM+ + +L+++N M+
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVT---LLAVLSSCANLG-AQVVGVEVERKIEQCG 300
+A+ + L+LY +M+ PD VT ++ VL C L A+ V E+++K
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK----N 569
Query: 301 FGSNPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAV 356
+ + + L++++ + GN+ +A + M+ +V + + A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 357 ELFDEMVRSGVRPDRTVFVTVLSACS 382
EL M+ G+RP + +LS C+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 225 QLFDEMLVRD-----LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+L DEM VRD +++N ++ Y + + + ++++M+ PD VT ++
Sbjct: 385 KLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----S 335
A G + +++ ++++ G + F + +IN + G+L A +F MVD+ +
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+V++ A++L+ +M +G PD+ + V+ H G ++ F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA-CKI 451
EM++K + P Y LVDL G+AG +++A ++M ++P+ +LL ++
Sbjct: 564 EMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 452 HKNVELAELAFEHV-IELEPTNIGYYVLLS 480
+K E EL + + L P+ Y +LLS
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++YN +I Y + +A+++F +M+ E G + + ++ + +G L
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAG-----FLDIA 453
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSG 244
++ GL D + + K G + A +LF EM+ + +L+++N M+
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVT---LLAVLSSCANLG-AQVVGVEVERKIEQCG 300
+A+ + L+LY +M+ PD VT ++ VL C L A+ V E+++K
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK----N 569
Query: 301 FGSNPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAV 356
+ + + L++++ + GN+ +A + M+ +V + + A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 357 ELFDEMVRSGVRPDRTVFVTVLSACS 382
EL M+ G+RP + +LS C+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 160/379 (42%), Gaps = 51/379 (13%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLP---ISYNAMISGYS 139
L ++ G QPD T +S+++ + LA + E N+ +Y+ +I
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
+ A+SLF+ M + S+V VT LV G G L V+
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSV------VTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVL 255
+ ++ N L ++VK G+++ A +L+ EM+ R ++I++N ++ GY +
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
+ M + SPD VT +++ + G++V R I + G +N + L+ +
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 316 ARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
+ G + A ELF EMV GV PD +
Sbjct: 414 CQSGKIKLAE-------------------------------ELFQEMVSHGVLPDVMTYG 442
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM-- 433
+L G +K L F++++ K + G Y+ +++ + + G++++A +L S+
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQ-KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 434 -KVKPDGAVWGALL-GACK 450
VKP+ + ++ G CK
Sbjct: 502 KGVKPNVMTYTVMISGLCK 520
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 152/382 (39%), Gaps = 28/382 (7%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNSMF 144
+ H+++TGS ++ S +S C R F N + + + ++
Sbjct: 17 IQPHLLKTGSLRTDLL-CTISSFFSSC------ERDFSSISNGNVCFRERLRSGIVDIKK 69
Query: 145 ADAVSLFRRM-RREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
DA++LF+ M R S V F+ + + NL L+G A +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFS-RFFSAIARTKQFNLVLDFCKQLELNGIA------HN 122
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYH 259
+ +N + + +C + A + +++ D ++N ++ G G + + L
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
M PD VT ++++ G + +++ RK+E+ ++ F + +I+ R G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 320 NLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
+ A ++F M + SVV++ + L +MV + P+ F
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA---MDLIKS 432
+L G + + EM + G+ P Y+ L+D RL EA +DL+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 433 MKVKPDGAVWGALL-GACKIHK 453
K PD + +L+ G C + +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKR 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 98/242 (40%), Gaps = 45/242 (18%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
I+YN ++ GY + + ++A ++ M R S + VT L+ G + + G
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI------VTFTSLIKGYCMVKRVDDG 387
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML----VRDLISWNAMVSG 244
+ GL A+ + + + + G+++LA +LF EM+ + D++++ ++ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 245 YAQNGHAARVLELYHEMKLRRMS-----------------------------------PD 269
NG + LE++ +++ +M P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
+T ++S G+ + RK+E+ G N N LI + R G+L + + +
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 330 GM 331
M
Sbjct: 568 EM 569
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 186/425 (43%), Gaps = 37/425 (8%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFA 145
R G + YT + LI+ + + S LA + + L ++ +++++GY +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
DAV+L +M + + +++T L+ G L N L V G +L
Sbjct: 173 DAVALVDQMVE------MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 206 VMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ K G+++LA L ++M + +++ ++ ++ + H L L+ EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 262 KLRRMSPDPVTLLAVLSSCANL-----GAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
+ + + P+ +T +++S N ++++ +ERKI N NALI+ +
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN-----PNVVTFNALIDAFV 341
Query: 317 RCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
+ G L A ++D M +D + ++++ A +F+ M+ P+
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
+ T+++ A D+G+ F EM ++ GL Y+ L+ +A A + K
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 433 M---KVKPDGAVWGALL-GACKIHKNVELAELAFEHV--IELEPTNIGYYVLLSNIYSDA 486
M V P+ + LL G CK K +E A + FE++ ++EPT Y +++ +
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 487 KNSEG 491
K +G
Sbjct: 520 KVEDG 524
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 185/480 (38%), Gaps = 49/480 (10%)
Query: 18 GEPKRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILS 77
G K P+ +N L ++K +++ +SL M R S
Sbjct: 75 GMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 134
Query: 78 LPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-----PISYN 132
L +++ G +P T SSL++ Y A + D+ + I++
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 133 AMISGYSLNSMFADAVSLFRRMRR------------------EDGSSTVKFNF------- 167
+I G L++ ++AV+L RM + + G + FN
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 168 ----NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
N V ++ H L G+ ++ +S ++ A
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 224 RQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+L +M+ R +++++NA++ + + G +LY EM R + PD T ++++
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 280 -CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV-- 336
C + E I + F N N LIN + + + +F M + +
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 337 --VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYF 394
V++T A +F +MV GV P+ + T+L G +K + F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 395 DEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALL-GACK 450
+ ++R ++P Y+ +++ + +AG++++ DL S+ VKPD ++ ++ G C+
Sbjct: 494 EYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 124/291 (42%), Gaps = 27/291 (9%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
I+Y+++IS ++DA L M K N N VT L+ L
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIER------KINPNVVTFNALIDAFVKEGKLVEA 349
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD----LISWNAMVSG 244
L+ + +D D+ +S + + ++ A+ +F+ M+ +D ++++N +++G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVL------SSCANLGAQVVGVEVERKIEQ 298
+ + +EL+ EM R + + VT ++ C N AQ+V +++
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN--AQMVF----KQMVS 463
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXX 354
G N N L++ + G L +A VF+ + ++ ++ ++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQP 405
+LF + GV+PD ++ T++S GL ++ F +M R+ G P
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM-REDGPLP 573
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
L+ M R P +LS+ A + + + + K+++ G N + N LIN +
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 317 RCGNLARARAVFDGMV----DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
R ++ A A+ M+ + S+V+ ++ AV L D+MV G RPD
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
F T++ + + D M ++ G QP Y +V+ L + G + A +L+
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 433 M---KVKPDGAVWGALLGA-CKI-HKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAK 487
M K++ + ++ ++ + CK H++ L + P I Y L+S + + +
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 488 NSEGVLRVRVMMRERKL 504
S+ R+ M ERK+
Sbjct: 311 WSDAS-RLLSDMIERKI 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 17/227 (7%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD---ETHNLP--ISYNAMISGY 138
+L+ +I+ PD +T SSLI+ + A+ +F+ P ++YN +I+G+
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ V LFR M + N+VT L+ G + V+
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVG------NTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD-----LISWNAMVSGYAQNGHAAR 253
G+ ++ N+ L K G++E A +F E L R + ++N M+ G + G
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCG 300
+L+ + L+ + PD + ++S G + + RK+ + G
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 177/430 (41%), Gaps = 50/430 (11%)
Query: 80 LTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD--ETHNLP--ISYNAMI 135
+ L ++R G PD + LI + A RV + E P +YNA+I
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALI 165
Query: 136 SGYSLNSMFADAVSLFRRMRREDGS-STVKFNFNSVTMLG-------LVSGCNLPNHLPT 187
+G+ + DA + RMR +D S TV +N M+G L + N L +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI----MIGSLCSRGKLDLALKVLNQLLS 221
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVS 243
C +T+ + + ++ G V+ A +L DEML R D+ ++N ++
Sbjct: 222 DNC-QPTVITYTILIEATMLE---------GGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 244 GYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKI--EQCGF 301
G + G R E+ ++L+ PD ++ +L + N G G ++ K+ E+C
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-- 329
Query: 302 GSNPFLTNALINMYARCGNLARARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVE 357
N + LI R G + A + M +K + S+ A+E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 358 LFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLL 417
+ M+ G PD + TVL+ G D+ L F ++ + G P Y+ + L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG-EVGCSPNSSSYNTMFSAL 448
Query: 418 GRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHKNVELAELAFEHVI-----ELE 469
+G A+ +I M + PD + +++ +C + + + AFE ++ E
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMI-SCLCREG--MVDEAFELLVDMRSCEFH 505
Query: 470 PTNIGYYVLL 479
P+ + Y ++L
Sbjct: 506 PSVVTYNIVL 515
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 139/337 (41%), Gaps = 31/337 (9%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--------ISYNA 133
+L ++ G +PD +T +++I K + R F+ NL ISYN
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCK---EGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 134 MISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHG 193
++ + + L +M E K + N VT L++ + L
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSE------KCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEML----VRDLISWNAMVSGYAQNG 249
GL D + + + + G +++A + + M+ + D++++N +++ +NG
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 250 HAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTN 309
A + LE++ ++ SP+ + + S+ + G ++ + + ++ G + N
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 310 ALINMYARCGNLARARAVFDGMVD-------KSVVSWTAXXXXXXXXXXXXXAVELFDEM 362
++I+ R G + A F+ +VD SVV++ A+ + + M
Sbjct: 478 SMISCLCREGMVDEA---FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 363 VRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMER 399
V +G RP+ T + ++ AG + + +++ R
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 109/268 (40%), Gaps = 10/268 (3%)
Query: 234 DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVE 293
D+ ++NA+++G+ + + M+ + SPD VT ++ S + G + ++V
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 294 RKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXX 349
++ LI G + A + D M+ + + ++
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 350 XXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEH 409
A E+ + G PD + +L A + G ++G +M + P
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVT 335
Query: 410 YSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALLGACKIHKNVELAELAFEHVI 466
YS L+ L R G+++EAM+L+K MK K PD + L+ A +++A E +I
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 467 E--LEPTNIGYYVLLSNIYSDAKNSEGV 492
P + Y +L+ + + K + +
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQAL 423
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 19/277 (6%)
Query: 218 GEVELARQLFDEMLVRD-----LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVT 272
GE+ +L DEM VRD +++N ++ Y + + + ++++M+ PD VT
Sbjct: 376 GEIN---KLLDEM-VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 273 LLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV 332
++ A G + +++ +++++ G + F + +IN + G+L A +F MV
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 333 DK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTD 388
+ ++V++ A++L+ +M +G +PD+ + V+ H G +
Sbjct: 492 GQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE 551
Query: 389 KGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGAL 445
+ F EM+RK + P Y LVDL G+AG + +A ++M ++P+ +L
Sbjct: 552 EAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSL 610
Query: 446 LGA-CKIHKNVELAELAFEHV-IELEPTNIGYYVLLS 480
L ++H+ E L + + L P+ Y +LLS
Sbjct: 611 LSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 122/327 (37%), Gaps = 45/327 (13%)
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGT 189
+Y M+ F + L M R DG N+VT L+ N+L
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVR-DGCKP-----NTVTYNRLIHSYGRANYLKEAM 414
Query: 190 CLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGY 245
+ G + D + + ++ K G +++A ++ M L D +++ +++
Sbjct: 415 NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 246 AQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ GH L+ EM + +P+ VT +++ A +++ R ++ GF +
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
+ ++ + CG L A V F EM R
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGV-------------------------------FAEMQRK 563
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
PD V+ ++ AG DK ++ M + GL+P + L+ R R+ E
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM-LQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Query: 426 AMDLIKSM---KVKPDGAVWGALLGAC 449
A +L++SM + P + LL C
Sbjct: 623 AYNLLQSMLALGLHPSLQTYTLLLSCC 649
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 165/427 (38%), Gaps = 57/427 (13%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE-----------THNLPI--- 129
+ H + R+G PY+ + LI Y K L A V DE T+N+ I
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 130 ----------------------SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNF 167
SYN ++ GY F +A LF +R D ++
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI---- 409
Query: 168 NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLF 227
VT L+ G +L L T + D+ + + +VK G + +A +++
Sbjct: 410 --VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 228 DEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEM-KLRRMSPDPVTLLAVLSSCAN 282
DEML + D ++ G + G + + L+ EM +PD +
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 283 LGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----SVVS 338
+G V +E +RKI + G + +I Y G AR ++D M+ K SV++
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 339 WTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEME 398
+ A + EM + GVRP+ +L AG D+ Y +ME
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 399 RKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKIHKNV 455
+ G+ P Y+ L+ + +E + L K M +++PDG AL + K+
Sbjct: 648 EE-GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK--HLEKDH 704
Query: 456 ELAELAF 462
E E+ F
Sbjct: 705 ESREVEF 711
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 152/388 (39%), Gaps = 55/388 (14%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++YN +I+G+S N +A MRR G + ++FN L+ G
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRS-GFAVTPYSFNP-----LIEGYCKQGLFDDA 327
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQN 248
+ + G+ + N ++ G ++ AR+L M D++S+N ++ GY +
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKM 387
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G L+ +++ + P VT
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTY----------------------------------- 412
Query: 309 NALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
N LI+ GNL A+ + + M + V+++T A E++DEM+R
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
G++PD + T G +DK +EM P Y+ +D L + G L
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 425 EAMDL---IKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVI--ELEPTNIGYYVLL 479
+A++ I + + PD + ++ + ++A ++ ++ L P+ I Y+VL
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL- 591
Query: 480 SNIYSDAKNS--EGVLRVRVMMRERKLR 505
IY AK E + M++R +R
Sbjct: 592 --IYGHAKAGRLEQAFQYSTEMKKRGVR 617
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 6/246 (2%)
Query: 235 LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVER 294
+I++N M+ + G RV +++ EMK R + VT +++ + G
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 295 KIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXX 354
+ + GF P+ N LI Y + G A V D M++ + T+
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
++ E++ S PD + T++ G + FD++ R + P Y+ L+
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYNTLI 416
Query: 415 DLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALLGACKIHKNVELAELAFEHVIE--LE 469
D L +G L+ A L + M + PD + L+ + N+ +A ++ ++ ++
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 470 PTNIGY 475
P Y
Sbjct: 477 PDGYAY 482
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 177/422 (41%), Gaps = 35/422 (8%)
Query: 93 GSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFADA 147
G + YT S LI+ + + S LA V + L ++ N++++G+ + +DA
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 148 VSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVM 207
VSL +M E G F FN+ L+ G N L V G DL
Sbjct: 171 VSLVGQM-VEMGYQPDSFTFNT-----LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 208 NSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
+ K G+++LA L +M + ++ +N ++ + L L+ EM
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 264 RRMSPDPVTLLAVLSSCANLG-----AQVVGVEVERKIEQCGFGSNPFLTNALINMYARC 318
+ + P+ VT +++ N G ++++ +ERKI N +ALI+ + +
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-----PNVVTFSALIDAFVKE 339
Query: 319 GNLARARAVFDGMVDKS----VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
G L A ++D M+ +S + ++++ A +F+ M+ P+ +
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 375 VTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM- 433
T++ A D+G+ F EM ++ GL Y+ L+ +A A + K M
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 434 --KVKPDGAVWGALLGACKIHKNVELAELAFEHV--IELEPTNIGYYVLLSNIYSDAKNS 489
V PD + LL + VE A + FE++ ++EP Y +++ + K
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 490 EG 491
+G
Sbjct: 519 DG 520
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 163/384 (42%), Gaps = 26/384 (6%)
Query: 85 LHAHVIRTGSQPDPYTRSSLIS---MYSKCS--LPFLARRVFDETHNLPISYNAMISGYS 139
L ++ G QPD +T ++LI +++ S + + R V ++Y +++G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
A+SL ++M + V +N++ + + CN N + L G
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVI-YNTI----IDALCNYKN-VNDALNLFTEMDNKG 286
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVL 255
+ ++ NS + G A +L +M+ R ++++++A++ + + G
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSS-CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+LY EM R + PD T ++++ C + E I + F N N LI
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKG 405
Query: 315 YARCGNLARARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + + +F M + +V ++T A +F +MV GV PD
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+ +L + G + L F+ ++R ++P Y+ +++ + +AG++++ DL
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 431 KSMK---VKPDGAVWGALL-GACK 450
S+ VKP+ + ++ G C+
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 145/332 (43%), Gaps = 18/332 (5%)
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
+ L Q+ + + +L +++ +++ + + + L + +M PD VTL ++L+
Sbjct: 101 ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----S 335
+ V + ++ + G+ + F N LI+ R + A A+ D MV K
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSA-CSHAGLTDKGLHYF 394
+V++ A+ L +M + + P ++ T++ A C++ + D L+ F
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-ALNLF 279
Query: 395 DEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGACKI 451
EM+ K G++P Y+ L+ L GR +A L+ M K+ P+ + AL+ A
Sbjct: 280 TEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 452 HKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPG 509
+ AE ++ +I+ ++P Y L++ + E M E + KD
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-----KHMFELMISKDCF 393
Query: 510 CSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAE 541
+ V Y + F R M E++R++++
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGM-ELFREMSQ 424
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 131/320 (40%), Gaps = 27/320 (8%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++YN++I ++DA L M K N N VT L+ L
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIER------KINPNVVTFSALIDAFVKEGKLVEA 345
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRD----LISWNAMVSG 244
L+ + +D D+ +S + + ++ A+ +F+ M+ +D ++++N ++ G
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVL------SSCANLGAQVVGVEVERKIEQ 298
+ + +EL+ EM R + + VT ++ C N AQ+V +++
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN--AQIVF----KQMVS 459
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXX 354
G + + L++ G + A VF+ + ++ + ++
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
+LF + GV+P+ + T++S GL ++ F EM+ + G P Y+ L+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE-GPLPDSGTYNTLI 578
Query: 415 DLLGRAGRLKEAMDLIKSMK 434
R G + +LI+ M+
Sbjct: 579 RAHLRDGDKAASAELIREMR 598
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD---ETHNLP--ISYNAMISGY 138
+L+ +I+ PD +T SSLI+ + A+ +F+ P ++YN +I G+
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
+ + LFR M + N+VT L+ G + V+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVG------NTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR-----DLISWNAMVSGYAQNGHAAR 253
G+ D+ + L G+VE A +F E L R D+ ++N M+ G + G
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
+L+ + L+ + P+ VT ++S G + + R++++ G + N LI
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 314 MYARCGNLA 322
+ R G+ A
Sbjct: 580 AHLRDGDKA 588
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 167/403 (41%), Gaps = 29/403 (7%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFD---ETHNLP--ISYNAMIS 136
GF+ +++ G+ PD ++LI + + A ++ + + +P I+YN MIS
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 137 GYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLG-LVSGCNLPNHLPTGTCLHGCA 195
GY +A+S+ RM T S+ G L + + + C
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY---- 236
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHA 251
D+ + + V A +L DEM R D++++N +V+G + G
Sbjct: 237 ------PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
++ ++M P+ +T +L S + G + ++ + + GF + N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 312 INMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
IN R G L RA + + M + +S+ A+E + MV G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM 427
PD + T+L+A G + + +++ K G P Y+ ++D L +AG+ +A+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 428 DLIKSMK---VKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
L+ M+ +KPD + +L+G V+ A + F H E
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA-IKFFHEFE 511
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 113/271 (41%), Gaps = 15/271 (5%)
Query: 232 VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE 291
V D+I++N M+SGY + G L + M + SPD VT +L S + G +E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 292 VERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXX 347
V ++ Q + LI R + A + D M D+ VV++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 348 XXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGP 407
A++ ++M SG +P+ +L + G +M RK G P
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSV 344
Query: 408 EHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALL-GACKIHKNVELAELAFE 463
++ L++ L R G L A+D+++ M +P+ + LL G CK K ++ A E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK-EKKMDRAIEYLE 403
Query: 464 HVIE--LEPTNIGYYVLLSNIYSDAKNSEGV 492
++ P + Y +L+ + D K + V
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 119/306 (38%), Gaps = 66/306 (21%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGS-STVKFNF--NSVTMLGLVS-------- 177
I++N ++ + DA L M R+ S S V FN N + GL+
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 178 ----GCNLPNHLPTGTCLHG-CA--------------VTFGLDADLAVMNSFLTMYVKCG 218
GC PN L LHG C V+ G D+ N+ LT K G
Sbjct: 370 MPQHGCQ-PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 219 EVELARQLFDEMLVRD----LISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLL 274
+VE A ++ +++ + LI++N ++ G A+ G + ++L EM+ + + PD +T
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 275 AVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK 334
+++ + G ++ + E+ G N N++ M C + R
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI--MLGLCKSRQTDR--------- 537
Query: 335 SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYF 394
A++ M+ G +P+ T + ++ ++ G+ + L
Sbjct: 538 --------------------AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 395 DEMERK 400
+E+ K
Sbjct: 578 NELCNK 583
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 35/214 (16%)
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
+S+N ++ G+ + R +E M R PD VT +L++ G VE+ +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 296 IEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXA 355
+ G N +I+ A+ G +A
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKA------------------------------- 468
Query: 356 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
++L DEM ++PD + +++ S G D+ + +F E ER G++P ++ ++
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER-MGIRPNAVTFNSIML 527
Query: 416 LLGRAGRLKEAMDLIKSM---KVKPDGAVWGALL 446
L ++ + A+D + M KP+ + L+
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 137/299 (45%), Gaps = 16/299 (5%)
Query: 208 NSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKL 263
N + K G+VE AR LF+EM LV D +++N+M+ G+ + G + + EMK
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
PD +T A+++ G +G+E R+++ G N + L++ + + G + +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 324 ARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
A + M +V ++T+ A L +EM++ GV + + ++
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VK 436
A + F +M+ G+ P Y+ L+ +A + A++L+ +K +K
Sbjct: 446 GLCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 437 PDGAVWGALL-GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGV 492
PD ++G + G C + K +E A++ + E ++ ++ Y L+ + +EG+
Sbjct: 505 PDLLLYGTFIWGLCSLEK-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 186/444 (41%), Gaps = 29/444 (6%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHN---LP--ISYNAMISGY 138
+ +I G++P +T + +I K AR +F+E +P ++YN+MI G+
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF 198
D V F M+ V +T L++ LP G +
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDV------ITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARV 254
GL ++ ++ + + K G ++ A + + +M LV + ++ +++ + G+ +
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
L +EM + + VT A++ + E+ K++ G N NALI+
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 315 YARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + N+ RA + + + + ++ + A + +EM G++ +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
++ T++ A +G +GLH DEM ++ ++ + L+D L + + +A+D
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEM-KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 431 KSMK----VKPDGAVWGALL-GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIY 483
+ ++ + A++ A++ G CK VE A FE +++ L P Y L+ +
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCK-DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 484 SDAKNSEGVLRVRVMMRERKLRKD 507
E L +R M E ++ D
Sbjct: 660 KQGNVLEA-LALRDKMAEIGMKLD 682
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 16/308 (5%)
Query: 208 NSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKL 263
N L + K G+ + ++ F +M+ + ++N M+ + G L+ EMK
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 264 RRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLAR 323
R + PD VT +++ +G V +++ + NALIN + + G L
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 324 ARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLS 379
+ M + +VVS++ A++ + +M R G+ P+ + +++
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 380 ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VK 436
A G +EM + G++ Y+ L+D L A R+KEA +L M V
Sbjct: 411 ANCKIGNLSDAFRLGNEM-LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNS-EGVLRV 495
P+ A + AL+ KN+ + A E + EL+ I +LL + S E +
Sbjct: 470 PNLASYNALIHGFVKAKNM---DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 496 RVMMRERK 503
+V+M E K
Sbjct: 527 KVVMNEMK 534
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 24/330 (7%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYN-----AMISGY 138
+ + + R G P+ YT +SLI K A R+ +E + + +N A+I G
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTML--GLVSGCNLPNHLPTGTCLHGCAV 196
+A LF +M ++ V N S L G V N+ L L G
Sbjct: 448 CDAERMKEAEELFGKM----DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG--- 500
Query: 197 TFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAA 252
G+ DL + +F+ ++E A+ + +EM + + + + ++ Y ++G+
Sbjct: 501 -RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 253 RVLELYHEMKLRRMSPDPVTLLAVLSS-CANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
L L EMK + VT ++ C N R G +N + A+
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 312 INMYARCGNLARARAVFDGMVDKSVV----SWTAXXXXXXXXXXXXXAVELFDEMVRSGV 367
I+ + + A +F+ MV K +V ++T+ A+ L D+M G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 368 RPDRTVFVTVLSACSHAGLTDKGLHYFDEM 397
+ D + +++ SH K + +EM
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 174/416 (41%), Gaps = 40/416 (9%)
Query: 79 PLTGFQLHAHVIRTGSQPDPYTRSSLI-------SMYSKCSLPFLARRVFDETHNLPIS- 130
P Q+ +IR +P+ T ++L+ S +S S AR VFD+ + +S
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS----AREVFDDMVKIGVSL 202
Query: 131 ----YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLP 186
+N +++GY L DA+ + RM E K N ++VT ++ + L
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSE-----FKVNPDNVTYNTILKAMSKKGRLS 257
Query: 187 TGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMV 242
L GL + N+ + Y K G ++ A Q+ + M ++ DL ++N ++
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 243 SGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFG 302
+G G LEL MK ++ PD VT ++ C LG + ++ ++E G
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 303 SNPFLTNALINMYARCGNLAR---ARAVFDGMVD-----KSVVSWTAXXXXXXXXXXXXX 354
+N N I++ C R R V + +VD +V++
Sbjct: 378 ANQVTHN--ISLKWLCKEEKREAVTRKVKE-LVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
A+E+ EM + G++ + T+L A D+ H K G Y L+
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA-HNLLNSAHKRGFIVDEVTYGTLI 493
Query: 415 DLLGRAGRLKEAMDL---IKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHVIE 467
R ++++A+++ +K +K+ P + + +L+G H ELA F+ + E
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 152/382 (39%), Gaps = 58/382 (15%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLN 141
G +L + QPD T ++LI + L AR++ ++ N + N + SL
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 142 SMFADAVSLFRRMRREDGSSTVK-------FNFNSVTMLGLVSGCNLPNHLPTGTCLHGC 194
L + +RE + VK F+ + VT L+ L +
Sbjct: 389 W-------LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 195 AVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGH 250
G+ + +N+ L K +++ A L + + D +++ ++ G+ +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 251 AARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNA 310
+ LE++ EMK +++P T +++ + G + +E ++ + G + N+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 311 LINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+I Y + +G V+K A E ++E ++ +PD
Sbjct: 562 IILGYCK-----------EGRVEK--------------------AFEFYNESIKHSFKPD 590
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEM--ERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
+L+ G+T+K L++F+ + ER+ Y+ ++ + +LKEA D
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT----YNTMISAFCKDKKLKEAYD 646
Query: 429 LIKSMKVK---PDGAVWGALLG 447
L+ M+ K PD + + +
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFIS 668
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 124/326 (38%), Gaps = 35/326 (10%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
++Y+ +I Y + A+ + R M G +K N ++T+ ++ L
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREM----GQKGIKMN--TITLNTILDALCKERKLDEA 470
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSG 244
L A G D + + + + +VE A +++DEM + + ++N+++ G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
+G +E + E+ + PD T +++ G E + + F +
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 305 PFLTNALINMYARCGNLARARAVFDGMVDK---SVVSWTAXXXXXXXXXXXXXAVELFDE 361
+ N L+N + G +A F+ ++++ V++ A +L E
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 362 MVRSGVRPDR---TVFVTVLSACSHAGLTDKGLHYFD------------EMERKYGLQPG 406
M G+ PDR F+++L TD+ L F E E+
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSES 710
Query: 407 PEH-------YSCLVDLLGRAGRLKE 425
E YS ++D L GRLKE
Sbjct: 711 KEELNTEAIAYSDVIDELCSRGRLKE 736
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 181/433 (41%), Gaps = 19/433 (4%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLN 141
F ++ G +P T S L+ ++ A V E N ++ ++
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
S F +A SL + + +D + + S T L+ G L ++ G +
Sbjct: 374 S-FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS----WNAMVSGYAQNGHAARVLEL 257
+ S + + + A + EML+R++ ++SG ++G ++ LEL
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ + + D T A+L G ++++I G + N LI+
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 318 CGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
L A D MV + + +++ A++ +D+ R+G+ PD
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 374 FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
+ ++ C A T++G +FDEM K +QP Y+ L+ R+GRL A++L + M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 434 K---VKPDGAVWGALLGACKIHKNVELAELAFEHV-IE-LEPTNIGYYVLLSNIYSDAKN 488
K + P+ A + +L+ I VE A+L FE + +E LEP N+ +Y L + Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQ 730
Query: 489 SEGVLRVRVMMRE 501
+++V ++RE
Sbjct: 731 ---MVKVECLLRE 740
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 150/389 (38%), Gaps = 45/389 (11%)
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTML---------------- 173
+YN +I GY N +A L + M G + + +F SV L
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 174 ----GLVSGCNLPNHLPTGTCLHG----------CAVTFGLDADLAVMNSFLTMYVKCGE 219
+ G L L +G C HG + G D N+ L + G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 220 VELARQLFDEML----VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLA 275
++ A ++ E+L V D +S+N ++SG EM R + PD T
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
++ N+ ++ ++ G + + + +I+ + + FD M+ K+
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 336 V----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
V V + A+EL ++M G+ P+ + +++ S ++
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA 448
F+EM R GL+P HY+ L+D G+ G++ + L++ M V P+ + ++G
Sbjct: 701 LLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 449 CKIHKNVELAELAFEHVIE--LEPTNIGY 475
NV A + E + P +I Y
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARV 254
G+ D+ + + + + K G+VE A +LF +M + +++++N ++ G G
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 255 LELYHEMKLRRMSPDPVT---LLAVLSSCANLG-AQVVGVEVERKIEQCGFGSNPFLTNA 310
+M R M P +T L+ L+ +G A V E+ +K GF N + N
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK----GFPPNVIVYNN 370
Query: 311 LINMYARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
LI+ + G+L +A + D MV K + ++ A L EM+ G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 367 VRPDRTVFVTVLS-ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
++ F +V+ CSH + D L + EM + + PG + L+ L + G+ +
Sbjct: 431 FNVNQGSFTSVICLLCSHL-MFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSK 488
Query: 426 AMDL 429
A++L
Sbjct: 489 ALEL 492
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNL---PISYNAMISGYSLNSMFA 145
R G PD YT S +I K + FDE + N+ + YN +I Y + +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
A+ L M+ + S NS T L+ G ++ + + L GL+ ++
Sbjct: 663 MALELREDMKHKGISP------NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVSGYAQNGHAARVLELYHEM 261
+ + Y K G++ L EM +++ I++ M+ GYA++G+ L +EM
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 262 KLRRMSPDPVT 272
+ + + PD +T
Sbjct: 777 REKGIVPDSIT 787
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 309 NALINMYARCGNLARARAVFDGM---VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
N L+ R + FD + V V +T AV+LF +M +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
GV P+ F TV+ G D+ + ++M + G++P YS LV L RA R+ +
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGD 348
Query: 426 AMDLIKSMKVK---PDGAVWGALLG----ACKIHKNVELAELAFEHVIELEPTNIGYYVL 478
A ++K M K P+ V+ L+ A ++K +E+ +L + L T+ Y L
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL--TSSTYNTL 406
Query: 479 LSNIYSD--AKNSEGVLR 494
+ + A N+E +L+
Sbjct: 407 IKGYCKNGQADNAERLLK 424
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 181/433 (41%), Gaps = 19/433 (4%)
Query: 82 GFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLN 141
F ++ G +P T S L+ ++ A V E N ++ ++
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
S F +A SL + + +D + + S T L+ G L ++ G +
Sbjct: 374 S-FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS----WNAMVSGYAQNGHAARVLEL 257
+ S + + + A + EML+R++ ++SG ++G ++ LEL
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
+ + + D T A+L G ++++I G + N LI+
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 318 CGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
L A D MV + + +++ A++ +D+ R+G+ PD
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 374 FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
+ ++ C A T++G +FDEM K +QP Y+ L+ R+GRL A++L + M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 434 K---VKPDGAVWGALLGACKIHKNVELAELAFEHV-IE-LEPTNIGYYVLLSNIYSDAKN 488
K + P+ A + +L+ I VE A+L FE + +E LEP N+ +Y L + Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQ 730
Query: 489 SEGVLRVRVMMRE 501
+++V ++RE
Sbjct: 731 ---MVKVECLLRE 740
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 150/389 (38%), Gaps = 45/389 (11%)
Query: 130 SYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTML---------------- 173
+YN +I GY N +A L + M G + + +F SV L
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 174 ----GLVSGCNLPNHLPTGTCLHG----------CAVTFGLDADLAVMNSFLTMYVKCGE 219
+ G L L +G C HG + G D N+ L + G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 220 VELARQLFDEML----VRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLA 275
++ A ++ E+L V D +S+N ++SG EM R + PD T
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKS 335
++ N+ ++ ++ G + + + +I+ + + FD M+ K+
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 336 V----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
V V + A+EL ++M G+ P+ + +++ S ++
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA 448
F+EM R GL+P HY+ L+D G+ G++ + L++ M V P+ + ++G
Sbjct: 701 LLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 449 CKIHKNVELAELAFEHVIE--LEPTNIGY 475
NV A + E + P +I Y
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARV 254
G+ D+ + + + + K G+VE A +LF +M + +++++N ++ G G
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 255 LELYHEMKLRRMSPDPVT---LLAVLSSCANLG-AQVVGVEVERKIEQCGFGSNPFLTNA 310
+M R M P +T L+ L+ +G A V E+ +K GF N + N
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK----GFPPNVIVYNN 370
Query: 311 LINMYARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSG 366
LI+ + G+L +A + D MV K + ++ A L EM+ G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 367 VRPDRTVFVTVLS-ACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
++ F +V+ CSH + D L + EM + + PG + L+ L + G+ +
Sbjct: 431 FNVNQGSFTSVICLLCSHL-MFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSK 488
Query: 426 AMDL 429
A++L
Sbjct: 489 ALEL 492
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDE--THNL---PISYNAMISGYSLNSMFA 145
R G PD YT S +I K + FDE + N+ + YN +I Y + +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
A+ L M+ + S NS T L+ G ++ + + L GL+ ++
Sbjct: 663 MALELREDMKHKGISP------NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 206 VMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVSGYAQNGHAARVLELYHEM 261
+ + Y K G++ L EM +++ I++ M+ GYA++G+ L +EM
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 262 KLRRMSPDPVT 272
+ + + PD +T
Sbjct: 777 REKGIVPDSIT 787
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 309 NALINMYARCGNLARARAVFDGM---VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRS 365
N L+ R + FD + V V +T AV+LF +M +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 366 GVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKE 425
GV P+ F TV+ G D+ + ++M + G++P YS LV L RA R+ +
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGD 348
Query: 426 AMDLIKSMKVK---PDGAVWGALLG----ACKIHKNVELAELAFEHVIELEPTNIGYYVL 478
A ++K M K P+ V+ L+ A ++K +E+ +L + L T+ Y L
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL--TSSTYNTL 406
Query: 479 LSNIYSD--AKNSEGVLR 494
+ + A N+E +L+
Sbjct: 407 IKGYCKNGQADNAERLLK 424
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 172/406 (42%), Gaps = 41/406 (10%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFA 145
R G + YT + LI+ + + S LA + + L ++ +++++GY +
Sbjct: 38 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLA 205
DAV+L +M + + +++T L+ G L N L V G +L
Sbjct: 98 DAVALVDQMVE------MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 206 VMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEM 261
+ K G+++LA L ++M + D++ +N ++ + H L L+ EM
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 262 KLRRMSPDPVTLLAVLSSCANLG-----AQVVGVEVERKIEQCGFGSNPFLT--NALINM 314
+ + + P+ VT +++S + G +Q++ +E+KI NP L NALI+
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI-------NPNLVTFNALIDA 264
Query: 315 YARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + G A + D M +D + ++ + A ++F+ MV PD
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
+ T++ + + G F EM + GL Y+ L+ L G A +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 431 KSM---KVKPDGAVWGALL-GAC---KIHKNVELAELAFEHVIELE 469
K M V PD + LL G C K+ K +E+ + + I+L+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/481 (19%), Positives = 189/481 (39%), Gaps = 59/481 (12%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
K P+ +N L ++K +++ +SL M R S
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-----PISYNAMI 135
L +++ G +P T SSL++ Y A + D+ + I++ +I
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
G L++ ++AV+L RM + N VT +V+G + L
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQP------NLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHA 251
++AD+ + N+ + K V+ A LF EM + +++++++++S G
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
+ +L +M ++++P+ VT A++ + G V ++ + + + F N+L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 312 INMYARCGNLARARAVFDGMVDKS------------------------------------ 335
IN + L +A+ +F+ MV K
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 336 ---VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLH 392
V++T A ++F +MV GV PD + +L + G +K L
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 393 YFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALL-GA 448
FD M+ K ++ Y+ +++ + +AG++ + DL S+ VKP+ + ++ G
Sbjct: 417 VFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 449 C 449
C
Sbjct: 476 C 476
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMV--- 332
+LS+ A + + + + K+++ G N + N LIN + R ++ A A+ M+
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 333 -DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
+ S+V+ ++ AV L D+MV G RPD F T++ + +
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALLGA 448
D M ++ G QP Y +V+ L + G + A +L+ M K++ D ++ ++ +
Sbjct: 136 ALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 449 CKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRER 502
+++V+ A F+ + + P + Y L+S + S + S+ + M+ ++
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 159/376 (42%), Gaps = 23/376 (6%)
Query: 89 VIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNSM----- 143
+++ G QP+ T +++ K LA + ++ I + +I ++S+
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 144 FADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDAD 203
DA++LF+ M T N VT L+S + L + ++ +
Sbjct: 276 VDDALNLFKEME------TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYH 259
L N+ + +VK G+ A +L+D+M+ R D+ ++N++V+G+ + + +++
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 260 EMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
M + PD VT ++ G E+ R++ G + LI G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 320 NLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFV 375
+ A+ VF MV V ++++ A+E+FD M +S ++ D ++
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 376 TVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKV 435
T++ AG D G F + K G++P Y+ ++ L L+EA L+K MK
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 436 K---PDGAVWGALLGA 448
P+ + L+ A
Sbjct: 569 DGPLPNSGTYNTLIRA 584
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 41/398 (10%)
Query: 99 YTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFADAVSLFRR 153
YT + LI+ + + S LA + + L ++ +++++GY +DAV+L +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTM 213
M + + +++T L+ G L N L V G +L +
Sbjct: 181 MVE------MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 214 YVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
K G+ +LA L ++M + D++ +N ++ + H L L+ EM+ + + P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 270 PVTLLAVLSSCANLG-----AQVVGVEVERKIEQCGFGSNPFLT--NALINMYARCGNLA 322
VT +++S + G +Q++ +E+KI NP L NALI+ + + G
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKI-------NPNLVTFNALIDAFVKEGKFV 347
Query: 323 RARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVL 378
A ++D M +D + ++ + A ++F+ MV PD + T++
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 379 SACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KV 435
+ + G F EM + GL Y+ L+ L G A + K M V
Sbjct: 408 KGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 436 KPDGAVWGALL-GAC---KIHKNVELAELAFEHVIELE 469
PD + LL G C K+ K +E+ + + I+L+
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 10/255 (3%)
Query: 257 LYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYA 316
L+ M R P V +LS+ A + V + + K+++ + N LIN +
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 317 RCGNLARARAVFDGMV----DKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRT 372
R ++ A A+ M+ + S+V+ ++ AV L D+MV G RPD
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 373 VFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKS 432
F T++ + + D M ++ G QP Y +V+ L + G A++L+
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 433 M---KVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAK 487
M K++ D ++ ++ + +++V+ A F+ + + P + Y L+S + S +
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 488 NSEGVLRVRVMMRER 502
S+ + M+ ++
Sbjct: 311 WSDASQLLSDMIEKK 325
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 8/252 (3%)
Query: 204 LAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELY----- 258
+ +N L M+V CG +++ RQ+FD M RD SW + G + G L+
Sbjct: 123 ITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLK 182
Query: 259 HEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGF--GSNPFLTNALINMYA 316
H K P + L VL +CA + +G +V + GF + +L+ +LI Y
Sbjct: 183 HSQKGAFKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYG 241
Query: 317 RCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVT 376
L A V + + + V+W A + F EM G++ + +VF
Sbjct: 242 EFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSN 301
Query: 377 VLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK 436
VL ACS + K G + L+++ G+ G++K+A + KS K +
Sbjct: 302 VLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDE 361
Query: 437 PDGAVWGALLGA 448
+ W A++ +
Sbjct: 362 TSVSCWNAMVAS 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 22 RHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXX----XXKSCAILS 77
R P +W + + + Y++A L+ ML+ S K+CA++
Sbjct: 148 RMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIR 207
Query: 78 LPLTGFQLHAHVIRTG--SQPDPYTRSSLISMYSKCSLPFLARRVFDETHNL-PISYNAM 134
G Q+HA + G + D Y SLI Y + A V + N +++ A
Sbjct: 208 DFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAK 267
Query: 135 ISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN-LPNHLPTGTCLHG 193
++ F + + F M G+ +K N + + ++ C+ + + +G +H
Sbjct: 268 VTNDYREGEFQEVIRDFIEM----GNHGIKKNVSVFS--NVLKACSWVSDGGRSGQQVHA 321
Query: 194 CAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLIS-WNAMVSGYAQNGHAA 252
A+ G ++D + + MY K G+V+ A ++F +S WNAMV+ Y QNG
Sbjct: 322 NAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYI 381
Query: 253 RVLELYHEMK 262
++L ++MK
Sbjct: 382 EAIKLLYQMK 391
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 118/296 (39%), Gaps = 7/296 (2%)
Query: 84 QLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDET-HNLPISYNAMISGYSLNS 142
+L H++++ +P + L+ M+ C + R++FD H S+ + G
Sbjct: 109 ELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 143 MFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGL-- 200
+ DA LF M + S F S + ++ C + G +H G
Sbjct: 169 DYEDAAFLFVSMLKH--SQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFID 226
Query: 201 DADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHE 260
+ D + S + Y + +E A + ++ + ++W A V+ + G V+ + E
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 261 MKLRRMSPDPVTLLAVLSSCANLG-AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCG 319
M + + VL +C+ + G +V + GF S+ + LI MY + G
Sbjct: 287 MGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYG 346
Query: 320 NLARARAVFDGMVDKSVVS-WTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVF 374
+ A VF D++ VS W A A++L +M +G++ T+
Sbjct: 347 KVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLL 402
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 156/377 (41%), Gaps = 25/377 (6%)
Query: 90 IRTGSQPDPYTRSSLISMYSK---CSLPFLARRVFDETHNLP--ISYNAMISGYSLNSMF 144
IR G PD T ++LI Y++ + R E P +YN++ISG + N M
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 145 ADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADL 204
+ LF M G S +++N++ + L H LH GL +
Sbjct: 100 NRVLQLFDEML-HSGLSPDMWSYNTL----MSCYFKLGRHGEAFKILHEDIHLAGLVPGI 154
Query: 205 AVMNSFLTMYVKCGEVELARQLFDEMLVR---DLISWNAMVSGYAQNGHAARVLELYHEM 261
N L K G + A +LF + R +L+++N +++G ++ V + E+
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 262 KLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNL 321
K +P+ VT +L G+++ K+++ G+ + F A+++ + G
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 322 ARA-----RAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD---RTV 373
A V G + +VS+ +L +E+ G++PD T+
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTI 334
Query: 374 FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
V L + G +K L EM G+QP +CL+D L +AG + AM L SM
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIGEM----GMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Query: 434 KVKPDGAVWGALLGACK 450
+V+ + + CK
Sbjct: 391 EVRDEFTYTSVVHNLCK 407
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 18/341 (5%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
ISY+ +++GY L M+R+ G + + S+ L L C L
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGL-LCRICKLAEAEEAF 339
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVSG 244
+ + + G+ D V + + + K G++ A + F EM RD+ +++ A++SG
Sbjct: 340 SEM----IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
+ Q G +L+HEM + + PD VT +++ G V + Q G N
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 305 PFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFD 360
LI+ + G+L A + M + ++ ++ + AV+L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 361 EMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRA 420
E +G+ D + T++ A +G DK EM K GLQP ++ L++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLH 574
Query: 421 GRLKEAMDLIKSMKVK---PDGAVWGALLGACKIHKNVELA 458
G L++ L+ M K P+ + +L+ I N++ A
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 147/363 (40%), Gaps = 24/363 (6%)
Query: 87 AHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMISGYSLN 141
+ +IR G PD ++LI + K A + F E H+ I +Y A+ISG+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+A LF M + +SVT L++G H+ +H + G
Sbjct: 400 GDMVEAGKLFHEMFCKGLEP------DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLEL 257
++ + + K G+++ A +L EM L ++ ++N++V+G ++G+ ++L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT--NALINMY 315
E + ++ D VT ++ + G E+ + E G G P + N L+N +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK--EMLGKGLQPTIVTFNVLMNGF 571
Query: 316 ARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
G L + + M+ K + ++ + A ++ +M GV PD
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
+ ++ A + F EM+ K G YS L+ + + EA ++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 432 SMK 434
M+
Sbjct: 691 QMR 693
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 20/315 (6%)
Query: 73 CAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP---- 128
C I + G H + G +PD T + LI+ Y K A RV +
Sbjct: 397 CQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 129 -ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
++Y +I G A L M + + F +NS+ V+G ++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI-FTYNSI-----VNGLCKSGNIEE 509
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVS 243
L G GL+AD + + Y K GE++ A+++ EML + L +++N +++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 244 GYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGS 303
G+ +G +L + M + ++P+ T +++ + + + G G
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELF 359
+ L+ + + N+ A +F M K SV +++ A E+F
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 360 DEMVRSGVRPDRTVF 374
D+M R G+ D+ +F
Sbjct: 690 DQMRREGLAADKEIF 704
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARV 254
G+ ++A N + + G ++ A L M ++ D+IS++ +V+GY + G +V
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+L MK + + P+ +++ + E ++ + G + + LI+
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 315 YARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + G++ A F M + V+++TA A +LF EM G+ PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
F +++ AG + M + G P Y+ L+D L + G L A +L+
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 431 KSM---KVKPDGAVWGALL-GACKIHKNVELA 458
M ++P+ + +++ G CK N+E A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEA 510
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 18/341 (5%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTG 188
ISY+ +++GY L M+R+ G + + S+ L L C L
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGL-LCRICKLAEAEEAF 339
Query: 189 TCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVSG 244
+ + + G+ D V + + + K G++ A + F EM RD+ +++ A++SG
Sbjct: 340 SEM----IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 245 YAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSN 304
+ Q G +L+HEM + + PD VT +++ G V + Q G N
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 305 PFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFD 360
LI+ + G+L A + M + ++ ++ + AV+L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 361 EMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRA 420
E +G+ D + T++ A +G DK EM K GLQP ++ L++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLH 574
Query: 421 GRLKEAMDLIKSMKVK---PDGAVWGALLGACKIHKNVELA 458
G L++ L+ M K P+ + +L+ I N++ A
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 147/363 (40%), Gaps = 24/363 (6%)
Query: 87 AHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMISGYSLN 141
+ +IR G PD ++LI + K A + F E H+ I +Y A+ISG+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 142 SMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLD 201
+A LF M + +SVT L++G H+ +H + G
Sbjct: 400 GDMVEAGKLFHEMFCKGLEP------DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 202 ADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLEL 257
++ + + K G+++ A +L EM L ++ ++N++V+G ++G+ ++L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT--NALINMY 315
E + ++ D VT ++ + G E+ + E G G P + N L+N +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK--EMLGKGLQPTIVTFNVLMNGF 571
Query: 316 ARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDR 371
G L + + M+ K + ++ + A ++ +M GV PD
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 372 TVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIK 431
+ ++ A + F EM+ K G YS L+ + + EA ++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 432 SMK 434
M+
Sbjct: 691 QMR 693
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 20/315 (6%)
Query: 73 CAILSLPLTGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP---- 128
C I + G H + G +PD T + LI+ Y K A RV +
Sbjct: 397 CQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 129 -ISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPT 187
++Y +I G A L M + + F +NS+ V+G ++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI-FTYNSI-----VNGLCKSGNIEE 509
Query: 188 GTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDL----ISWNAMVS 243
L G GL+AD + + Y K GE++ A+++ EML + L +++N +++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 244 GYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGS 303
G+ +G +L + M + ++P+ T +++ + + + G G
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 304 NPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELF 359
+ L+ + + N+ A +F M K SV +++ A E+F
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 360 DEMVRSGVRPDRTVF 374
D+M R G+ D+ +F
Sbjct: 690 DQMRREGLAADKEIF 704
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 199 GLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARV 254
G+ ++A N + + G ++ A L M ++ D+IS++ +V+GY + G +V
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 255 LELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINM 314
+L MK + + P+ +++ + E ++ + G + + LI+
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 315 YARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + G++ A F M + V+++TA A +LF EM G+ PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
F +++ AG + M + G P Y+ L+D L + G L A +L+
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 431 KSM---KVKPDGAVWGALL-GACKIHKNVELA 458
M ++P+ + +++ G CK N+E A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEA 510
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 168/424 (39%), Gaps = 51/424 (12%)
Query: 99 YTRSSLISMYSKCSLPFLARRVFDETHNL-----PISYNAMISGYSLNSMFADAVSLFRR 153
YT S +I+ + +C LA + L I+++ +I+G L ++A+ L R
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTM 213
M E G + +T+ LV+G L L V +G + L +
Sbjct: 184 MV-EMGHKP-----DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 214 YVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPD 269
K G+ LA +L +M R D + ++ ++ G ++G L++EM+++ ++ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 270 PVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFD 329
+T ++ N G G ++ R + + N + LI+ + + G L A
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE---- 353
Query: 330 GMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
EL EM+ G+ PD + +++ DK
Sbjct: 354 ---------------------------ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALL 446
D M K G P ++ L++ +A R+ + ++L + M ++ D + L+
Sbjct: 387 ANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 447 -GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLR 505
G C++ K EL E V P NI Y +L + D SE L + + + K+
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 506 KDPG 509
D G
Sbjct: 506 LDIG 509
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 39/335 (11%)
Query: 129 ISYNAMISGYSLNSMFADAVSLFRRM-RREDGSSTVKFNF-------------------- 167
I+YN +I G+ + D L R M +R+ + V F+
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 168 --------NSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGE 219
+++T L+ G NHL + V+ G D ++ N + Y K
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 220 VELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLA 275
++ +LF +M +R D +++N ++ G+ + G EL+ EM R++ P+ VT
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 276 VLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM---- 331
+L + G +E+ KIE+ + + N +I+ + A +F +
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 332 VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGL 391
V V ++ A LF +M G PD + ++ A G K +
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 392 HYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEA 426
+E++R G ++D+L GRLK++
Sbjct: 599 KLIEELKR-CGFSVDASTIKMVIDMLSD-GRLKKS 631
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 119/281 (42%), Gaps = 10/281 (3%)
Query: 220 VELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
++L R + + +I ++ + S A+ VL L +M+L+ ++ + TL +++
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 132
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD----KS 335
+ KI + G+ N + LIN G ++ A + D MV+
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 336 VVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
+++ A+ L D+MV G +P+ + VL+ +G T +
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALLGA-CKI 451
+ME + ++ YS ++D L + G L A +L M++K + + L+G C
Sbjct: 253 KMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 452 HKNVELAELAFEHVI-ELEPTNIGYYVLLSNIYSDAKNSEG 491
+ + A+L + + ++ P + + VL+ + + K E
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 18/251 (7%)
Query: 192 HGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR---DLISWNAMVSGYAQN 248
HGC DLA N+ L + K VE A +LF + R D +++N +++G+
Sbjct: 155 HGCF------QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLI 208
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVE--VERKIEQCGFGSNPF 306
+ LE+ EM R ++P+ T +L G E +E K C +
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 307 LTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEM 362
T +++ + G + RAR VFD M+ + SV ++ A AV +F+EM
Sbjct: 269 TT--VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 363 VRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGR 422
VR G P+ T + ++ HAG +G ME + G +P + Y+ ++
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSE 385
Query: 423 LKEAMDLIKSM 433
+++A+ L + M
Sbjct: 386 VEKALGLFEKM 396
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 9/246 (3%)
Query: 254 VLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALIN 313
V L H M+ R+ P P T V A+ G V++ + + G + N +++
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 314 MYARCGNLARARAVF---DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
+ + + +A +F G V++ A+E+ EMV G+ P+
Sbjct: 170 VLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
T + T+L AG +F EM +K + Y+ +V G AG +K A ++
Sbjct: 230 LTTYNTMLKGFFRAGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 431 KSM---KVKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSD 485
M V P A + A++ NVE A + FE ++ EP Y VL+ ++
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 486 AKNSEG 491
+ S G
Sbjct: 349 GEFSRG 354
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 51/356 (14%)
Query: 131 YNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTC 190
Y + G + F SLF M +D SS +FN+ + + L C
Sbjct: 208 YVVLFDGLNQGRDFVGIQSLFEEMV-QDSSSHGDLSFNAYNQV--IQYLAKAEKLEVAFC 264
Query: 191 LHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLI----SWNAMVSGYA 246
A G D N+ + +++ G A ++++ M D + ++ ++ A
Sbjct: 265 CFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLA 324
Query: 247 QNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPF 306
++G +L+ +MK R++ P +++ S G ++V +E GFG P
Sbjct: 325 KSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV--YMEMQGFGHRPS 382
Query: 307 LTN--ALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
T +LI+ YA+ G L A+ L+DEM +
Sbjct: 383 ATMFVSLIDSYAKAGKL-------------------------------DTALRLWDEMKK 411
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
SG RP+ ++ ++ + + +G + + F +ME K G P P YSCL+++ +G++
Sbjct: 412 SGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME-KAGFLPTPSTYSCLLEMHAGSGQVD 470
Query: 425 EAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELAELAFEHVIELEPTNIGYYV 477
AM + SM ++P + + +LL + N L ++A + ++E++ +GY V
Sbjct: 471 SAMKIYNSMTNAGLRPGLSSYISLL---TLLANKRLVDVAGKILLEMKA--MGYSV 521
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 174/429 (40%), Gaps = 19/429 (4%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
+ P+ ++ L +++K + Y +SL+ HM S +
Sbjct: 62 QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMI 135
+ +++ G +PD T SSLI+ + + + F A + + + + YN +I
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 136 SGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCA 195
G + DAV LF RM R DG +NS LV+G L
Sbjct: 182 DGSCKIGLVNDAVELFDRMER-DGVRADAVTYNS-----LVAGLCCSGRWSDAARLMRDM 235
Query: 196 VTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHA 251
V + ++ + + ++VK G+ A +L++EM R D+ ++N++++G +G
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 252 ARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNAL 311
++ M + PD VT +++ G ++ R++ Q G + N +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 312 INMYARCGNLARARAVFDGMVDK-SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
I Y + G A+ +F M + ++ +++ A+ LF+ M +S + D
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLI 430
T + V+ G + F + K GL+P Y+ ++ R R + DL+
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRK-RQWDKSDLL 473
Query: 431 KSMKVKPDG 439
K++ DG
Sbjct: 474 YR-KMQEDG 481
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 51/357 (14%)
Query: 125 HNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNF--NSVTMLGLVSGCNLP 182
H+L SYN +I+ S F A+S+ +M +KF + + VT+ L++G
Sbjct: 102 HDL-YSYNIVINCLCRCSRFVIALSVVGKM--------MKFGYEPDVVTVSSLINGFCQG 152
Query: 183 NHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEM----LVRDLISW 238
N + L G D+ + N+ + K G V A +LFD M + D +++
Sbjct: 153 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
N++V+G +G + L +M +R + P+ +T AV+ G +++ ++ +
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVEL 358
+ F N+LIN G + A+ + D MV K
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK------------------------ 308
Query: 359 FDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLG 418
G PD + T+++ + D+G F EM ++ GL Y+ ++
Sbjct: 309 -------GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYF 360
Query: 419 RAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIHKNVELAELAFEHV----IELEPT 471
+AGR A ++ M +P+ + LL ++ VE A + FE++ IEL+ T
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 143/397 (36%), Gaps = 62/397 (15%)
Query: 238 WNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIE 297
W S + + ++L+ +M R P V VLS A + + + +E
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 298 QCGFGSNPFLTNALINMYARCGNLARARAVFDGMV----DKSVVSWTAXXXXXXXXXXXX 353
CG G + + N +IN RC A +V M+ + VV+ ++
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 354 XAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERK------------- 400
A++L +M G RPD ++ T++ GL + + FD MER
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 401 ---------------------YGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK---VK 436
+ P ++ ++D+ + G+ EAM L + M V
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 437 PDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLR 494
PD + +L+ +H V+ A+ + ++ P + Y L++ + EG
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 495 VRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEIHRPDE 554
R M +R L D + Y + ++ R +EI+ R D
Sbjct: 337 FR-EMAQRGLVGDT----ITYNTIIQGYFQAGRPDAA-QEIF-------------SRMDS 377
Query: 555 KYRVRSEELLNGNGVHSERLAIAFALLSTRPGTEITI 591
+ +R+ +L + R+ A L +EI +
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 13/252 (5%)
Query: 211 LTMYVKCGEVELARQLFDEMLV----RDLISWNAMVSGYAQNGHAARVLELYHEMKLRRM 266
L+ K +L LF M V DL S+N +++ + L + +M
Sbjct: 76 LSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY 135
Query: 267 SPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARA 326
PD VT+ ++++ +++ K+E+ GF + + N +I+ + G + A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 327 VFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACS 382
+FD M V V++ + A L +MV + P+ F V+
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 383 HAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK---PDG 439
G + + ++EM R+ + P Y+ L++ L GR+ EA ++ M K PD
Sbjct: 256 KEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 440 AVWGALL-GACK 450
+ L+ G CK
Sbjct: 315 VTYNTLINGFCK 326
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 196/479 (40%), Gaps = 65/479 (13%)
Query: 21 KRHPVNPTTAWNLRLMELSKQRQYKEALSLYRHMLRSSXXXXXXXXXXXXKSCAILSLPL 80
+ P+ +N ++K +QY+ L+L + M S +C L
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTLSIMINCFCRCRKL 139
Query: 81 T-GFQLHAHVIRTGSQPDPYTRSSLIS-MYSKC----SLPFLARRVFDETHNLP--ISYN 132
+ F +++ G +PD ++L++ + +C +L + R V E + P I+ N
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV--EMGHKPTLITLN 197
Query: 133 AMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLH 192
+++G LN +DAV L RM E G F N VT +++ L
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMV-ETG-----FQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 193 GCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQN 248
+ D + + K G ++ A LF+EM ++ D+I++N ++ G+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 249 GHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
G +L +M R++SP+ VT ++ S G ++ +++ Q G N
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 309 NALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVR 368
N+LI+ + + L A+++ D M+ G
Sbjct: 372 NSLIDGFCKENRLEE-------------------------------AIQMVDLMISKGCD 400
Query: 369 PDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMD 428
PD F +++ A D GL F EM + G+ Y+ LV ++G+L+ A
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 429 LIKSM---KVKPDGAVWGALL-GACKIHKNVELAELAFEHVIELEPT----NIGYYVLL 479
L + M +V+PD + LL G C N EL E A E ++E + +IG Y+++
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLC---DNGEL-EKALEIFGKIEKSKMELDIGIYMII 514
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 186/481 (38%), Gaps = 54/481 (11%)
Query: 113 LPFLARRVFDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFN---- 168
L F R F + +SY +S + DAV LFR M + TV +FN
Sbjct: 38 LLFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTV-IDFNRLFS 96
Query: 169 -------------------------SVTMLGLVSGCNLP-NHLPTGTCLHGCAVTFGLDA 202
S+ L ++ C L G + G +
Sbjct: 97 AIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEP 156
Query: 203 DLAVMNSFLT-MYVKCGEVELARQLFDEMLVR----DLISWNAMVSGYAQNGHAARVLEL 257
D + N+ L + ++C V A +L D M+ LI+ N +V+G NG + + L
Sbjct: 157 DTVIFNTLLNGLCLEC-RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 258 YHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYAR 317
M P+ VT VL+ G + +E+ RK+E+ + + +I+ +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 318 CGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTV 373
G+L A +F+ M K ++++ +L +M++ + P+
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 374 FVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAM---DLI 430
F ++ + G + EM ++ G+ P Y+ L+D + RL+EA+ DL+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 431 KSMKVKPDGAVWGALL-GACKIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNS 489
S PD + L+ G CK ++ + EL E + N Y L + +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 490 EGVLRVRVMMRERKLRKDPGCSYVEYKGKVHVFYSGDRNHPQMKEIYRKVAELENSVMEI 549
E ++ M R++R D V YK + G ++ ++++ ++E S ME+
Sbjct: 455 EVAKKLFQEMVSRRVRPD----IVSYK----ILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 550 H 550
Sbjct: 507 D 507
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 186/463 (40%), Gaps = 49/463 (10%)
Query: 47 ALSLYRHMLRSSXXXXXXXXXXXXK---SCAILSLPLTGFQLHAHVIRTGSQPDPYTRSS 103
A+SLYR M K C LS L+ F + + G QPD T ++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF---GKLTKLGFQPDVVTFNT 181
Query: 104 LISMYSKCSLPFLARRVFDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTV 163
L ++ C L R IS + GY + + F +AV+LF +M E G + V
Sbjct: 182 L--LHGLC----LEDR---------ISEALALFGYMVETGFLEAVALFDQM-VEIGLTPV 225
Query: 164 KFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELA 223
FN+ L++G L + L V GL D+ + + K G+ + A
Sbjct: 226 VITFNT-----LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 224 RQLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS 279
L +M + D++ ++A++ ++GH + L+ EM + ++P+ T ++
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 280 CANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV--- 336
+ G + R + + + NALI+ + G L A + D M+ + +
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 337 -VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFD 395
V++ + A +FD M PD F T++ A D+G+
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 396 EMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM---KVKPDGAVWGALL-GAC-- 449
E+ R+ GL Y+ L+ L A DL + M V PD LL G C
Sbjct: 457 EISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 450 -KIHKNVELAELAFEHVIELEPTNIGYYVLLSNIYSDAKNSEG 491
K+ + +EL E+ I+L+ + Y +++ + +K E
Sbjct: 516 EKLEEALELFEVIQMSKIDLD--TVAYNIIIHGMCKGSKVDEA 556
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 161/409 (39%), Gaps = 43/409 (10%)
Query: 99 YTRSSLISMYSKCSLPFLARRVFDETHNLP-----ISYNAMISGYSLNSMFADAVSLFRR 153
Y+ + LI + C + F + L +++N ++ G L ++A++LF
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 154 MRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTM 213
M V F+ + +GL N L G CL G L+A
Sbjct: 202 MVETGFLEAVAL-FDQMVEIGLTPVVITFNTLINGLCLEGRV----LEA----------- 245
Query: 214 YVKCGEVELARQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTL 273
L ++ + L D++++ +V+G + G L L +M+ + PD V
Sbjct: 246 ------AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 274 LAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVD 333
A++ G + ++ + G N F N +I+ + G + A+ + M++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 334 K----SVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDK 389
+ V+++ A A +L DEM+ + PD + +++ D
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 390 GLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVK---PDGAVWGALL 446
H FD M P ++ ++D+ RA R+ E M L++ + + + + L+
Sbjct: 420 AKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 447 -GACKIHKNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGV 492
G C++ N+ A+ F+ +I + P I +LL + K E +
Sbjct: 475 HGFCEV-DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 137/356 (38%), Gaps = 40/356 (11%)
Query: 81 TGFQLHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPI-----SYNAMI 135
+ L + + T +PD S++I K A+ +F E I +YN MI
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 136 SGYSLNSMFADAVSLFRRM-RREDGSSTVKFN------------FNSVTMLG-LVSGCNL 181
G+ ++DA L R M RE + FN F + + ++ C
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 182 P-----NHLPTGTCLHG----CAVTFGLDA--DLAVMNSFLTMYVKCGEVELARQLFDEM 230
P N + G C H F L A D+ N+ + +Y + V+ QL E+
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 231 ----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSS-CANLGA 285
LV + ++N ++ G+ + + +L+ EM + PD +T +L C N
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 286 QVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTA 341
+ +E+ I+ + N +I+ + + A +F + V+ V ++
Sbjct: 519 EE-ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 342 XXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEM 397
A LF +M +G PD + + T++ C AG DK + EM
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 25/278 (8%)
Query: 236 ISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERK 295
+ N ++ + + + LY +M++RR+ + + ++ + + K
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 296 IEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVVSWTAXXXXXXXXXXXXXA 355
+ + GF + N L++ ++ A A+F MV+ + A
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE----------------A 210
Query: 356 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVD 415
V LFD+MV G+ P F T+++ G + ++M K GL Y +V+
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVN 269
Query: 416 LLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLG-ACKIHKNVELAELAFEHVIE--LE 469
+ + G K A++L+ M+ +KPD ++ A++ CK + + A+ F ++E +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEKGIA 328
Query: 470 PTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
P Y ++ S + S+ +R M+ ER++ D
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPD 365
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 184/460 (40%), Gaps = 83/460 (18%)
Query: 128 PISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNF-------------NSVTMLG 174
P++YNA+I + N+ A++L +M R+DG + N+ +SV +L
Sbjct: 197 PLTYNALIGACARNNDIEKALNLIAKM-RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 175 LVS---------GCNLPNHLPTGTC----------LHGCAVTFGLDADLAVMNSFLTMYV 215
L L N + G L G A GL A A + S ++
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 216 KCGEVELARQLFDEMLVRDLI----SWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPV 271
G A LF+E+ + ++NA++ GY + G + EM+ R +SPD
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 272 TLLAVLSSCANLG----AQVVGVEVE-------------------------------RKI 296
T ++ + N G A++V E+E +++
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 297 EQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXX 352
+ G + N +I+ + + L A FD M+ + + V+W
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 353 XXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSC 412
A E+F+ M R G P T + ++++ D +M+ + G+ P ++
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNVVTHTT 554
Query: 413 LVDLLGRAGRLKEAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELAELAFEHVIE-- 467
LVD+ G++GR +A++ ++ MK +KP ++ AL+ A E A AF +
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
L+P+ + L++ D +++E V M+E ++ D
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEA-FAVLQYMKENGVKPD 653
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 124/327 (37%), Gaps = 33/327 (10%)
Query: 91 RTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPISYNA-----MISGYSLNSMFA 145
+ G PD +T S LI Y AR V E + N+ +++G+ +
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 146 DAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTF------G 199
+ + M+ +F +N V + CL TF G
Sbjct: 427 KTFQVLKEMKSIGVKPDRQF-YNVVI-----------DTFGKFNCLDHAMTTFDRMLSEG 474
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEMLVRDLI----SWNAMVSGYAQNGHAARVL 255
++ D N+ + + K G +A ++F+ M R + ++N M++ Y +
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 256 ELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMY 315
L +MK + + P+ VT ++ G +E +++ G + + NALIN Y
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 316 ARCGNLARARAVF-----DGMVDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPD 370
A+ G +A F DG+ S+++ + A + M +GV+PD
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGL-KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Query: 371 RTVFVTVLSACSHAGLTDKGLHYFDEM 397
+ T++ A K ++EM
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEM 680
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 190/475 (40%), Gaps = 61/475 (12%)
Query: 87 AHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLP--------ISYNAMISGY 138
+ V G PD T ++LIS YS L F+ + +P +YN +I+G
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGL---MEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 139 SLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNH-----------LPT 187
+ + A +F M R G S + S+ M G + +P
Sbjct: 316 CKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 188 GTCLHGCAVTF----GLDADLAVMNS---------------FLTMYVKCGEVELARQLFD 228
C F LD L NS + Y + G + +A L +
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 229 EMLVR----DLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLG 284
EML + D++++N ++ G + +L++EM R + PD TL ++ LG
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 285 AQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV----VSWT 340
+E+ +K+++ + N L++ + + G++ A+ ++ MV K + +S++
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 341 AXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERK 400
A ++DEM+ ++P + +++ +G G + ++M +
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 401 YGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMK-----VKPDGAVWGALL-GACKIHKN 454
G P Y+ L+ R + +A L+K M+ + PD + ++L G C+ ++
Sbjct: 615 -GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 455 VELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
E AE+ +IE + P Y +++ S +E R+ M +R D
Sbjct: 674 KE-AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA-FRIHDEMLQRGFSPD 726
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 173/417 (41%), Gaps = 38/417 (9%)
Query: 121 FDETHNLPISYNAMISGYSLNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCN 180
F + +S +AMI + +DA S RM R G S ++ NS+ G N
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEI-VNSLDSTFSNCGSN 164
Query: 181 ----------------LPNHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELAR 224
L T L T +DA A++ S V+ G VELA
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL----VRIGWVELAW 220
Query: 225 QLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSC 280
++ E+ + ++ + N MV+ ++G +V +++ + + PD VT ++S+
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 281 ANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSV---- 336
++ G E+ + GF + N +IN + G RA+ VF M+ +
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 337 VSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDE 396
++ + ++F +M V PD F +++S + +G DK L YF+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 397 MERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSMKVKP---DGAVWGALL-GACKIH 452
+ ++ GL P Y+ L+ R G + AM+L M + D + +L G CK
Sbjct: 401 V-KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK-R 458
Query: 453 KNVELAELAFEHVIE--LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
K + A+ F + E L P + +L+ + N + + + M+E+++R D
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDG-HCKLGNLQNAMELFQKMKEKRIRLD 514
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 136/344 (39%), Gaps = 36/344 (10%)
Query: 207 MNSFLTMYVKCGEVELARQLFDEMLVRDLIS----WNAMVSGYAQNGHAARVLEL----Y 258
+++ + + V+ G + A+ M+ R +S N++ S ++ G V +L Y
Sbjct: 116 LSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTY 175
Query: 259 HEMKLRRMSPDPVTLL-------------AVLSSCANLGAQVVGVEVERKIEQCGFGSNP 305
+ + R + + TLL A++ S +G + V ++I + G G N
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 306 FLTNALINMYARCGNLARARAVFDGMVDKSV----VSWTAXXXXXXXXXXXXXAVELFDE 361
+ N ++N + G + + + +K V V++ A EL +
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 362 MVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAG 421
M G P + TV++ G ++ F EM R GL P Y L+ + G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKG 354
Query: 422 RLKEAMDLIKSMK---VKPDGAVWGALLGACKIHKNVELAELAFEHVIE--LEPTNIGYY 476
+ E + M+ V PD + +++ N++ A + F V E L P N+ Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 477 VLLSNIYSDAKNSEGVLRVRVMMRERKLRKDPGCSYVEYKGKVH 520
+L+ +G++ V + +R L++ V Y +H
Sbjct: 415 ILIQ-----GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 154/370 (41%), Gaps = 33/370 (8%)
Query: 85 LHAHVIRTGSQPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-----YNAMISGYS 139
L ++ G QPD T ++I+ K P LA + ++ I YN +I G
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 140 LNSMFADAVSLFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFG 199
DA LF +M + G F +N + + CN + L +
Sbjct: 262 KYKHMDDAFDLFNKMETK-GIKPDVFTYNPL----ISCLCNY-GRWSDASRLLSDMLEKN 315
Query: 200 LDADLAVMNSFLTMYVKCGEVELARQLFDEML-----VRDLISWNAMVSGYAQNGHAARV 254
++ DL N+ + +VK G++ A +L+DEM+ D++++N ++ G+ +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 255 LELYHEMKLRRMSPDPVTLLAVL------SSCANLGAQVVGVEVERKIEQCGFGSNPFLT 308
+E++ EM R + + VT ++ C N AQ+V +++ G +
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN--AQMVF----KQMVSDGVHPDIMTY 429
Query: 309 NALINMYARCGNLARARAVFDGMVDKS----VVSWTAXXXXXXXXXXXXXAVELFDEMVR 364
N L++ GN+ A VF+ M + +V++T +LF +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 365 SGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLK 424
GV+P+ + T++S GL ++ F EM+ G P Y+ L+ R G
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED-GPLPNSGTYNTLIRARLRDGDEA 548
Query: 425 EAMDLIKSMK 434
+ +LIK M+
Sbjct: 549 ASAELIKEMR 558
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 141/340 (41%), Gaps = 18/340 (5%)
Query: 183 NHLPTGTCLHGCAVTFGLDADLAVMNSFLTMYVKCGEVELARQLFDEMLVR----DLISW 238
+ L + G + G + +NS L + + A L D+M+ D +++
Sbjct: 124 SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 239 NAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQ 298
+V G Q+ A+ + L M ++ PD VT AV++ G + + + K+E+
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 299 CGFGSNPFLTNALINMYARCGNLARARAVFDGMVDK----SVVSWTAXXXXXXXXXXXXX 354
++ + N +I+ + ++ A +F+ M K V ++
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 355 AVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLV 414
A L +M+ + PD F ++ A G + +DEM + P Y+ L+
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 415 DLLGRAGRLKEAMDLIKSMKVKPDGAVWGALLGACKIH-----KNVELAELAFEHVIE-- 467
+ R++E M++ + M + G V + IH ++ + A++ F+ ++
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 468 LEPTNIGYYVLLSNIYSDAKNSEGVLRVRVMMRERKLRKD 507
+ P + Y +LL + ++ N E L V M++R ++ D
Sbjct: 422 VHPDIMTYNILLDGLCNNG-NVETALVVFEYMQKRDMKLD 460
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 225 QLFDEM----LVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRRMSPDPVTLLAVLSSC 280
++FDEM + R + S+ A+++ Y +NG LEL MK ++SP +T V+++C
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 281 ANLGAQ---VVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARARAVFDGMVDKSVV 337
A G ++G+ E + E G + N L++ A G A VF M D +V
Sbjct: 222 ARGGLDWEGLLGLFAEMRHE--GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIV 279
Query: 338 ----SWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSACSHAGLTDKGLHY 393
+++ +L EM G PD T + +L A + +G + +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 394 FDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDL---IKSMKVKPDGAVWGALL 446
F +M+ G P YS L++L G++GR + L +KS PD A + L+
Sbjct: 340 FHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 19/352 (5%)
Query: 95 QPDPYTRSSLISMYSKCSLPFLARRVFDETHNLPIS-----YNAMISGYSLNSMFADAVS 149
+P+ + + +IS+ + L VFDE + +S Y A+I+ Y N + ++
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 150 LFRRMRREDGSSTVKFNFNSVTMLGLVSGCNLPNHLPTGTCLHGCAVTFGLDADLAVMNS 209
L RM+ E S ++ +N+V G + L L G+ D+ N+
Sbjct: 198 LLDRMKNEKISPSI-LTYNTVINACARGGLDWEGLLG----LFAEMRHEGIQPDIVTYNT 252
Query: 210 FLTMYVKCG---EVELA-RQLFDEMLVRDLISWNAMVSGYAQNGHAARVLELYHEMKLRR 265
L+ G E E+ R + D +V DL +++ +V + + +V +L EM
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 266 MSPDPVTLLAVLSSCANLGAQVVGVEVERKIEQCGFGSNPFLTNALINMYARCGNLARAR 325
PD + +L + A G+ + V +++ G N + L+N++ + G R
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 326 AVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELFDEMVRSGVRPDRTVFVTVLSAC 381
+F M D ++ V LF +MV + PD + ++ AC
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 382 SHAGLTDKGLHYFDEMERKYGLQPGPEHYSCLVDLLGRAGRLKEAMDLIKSM 433
GL + M + P + Y+ +++ G+A +EA+ +M
Sbjct: 433 GKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 304 NPFLTNALINMYARCGNLARARAVFDGM----VDKSVVSWTAXXXXXXXXXXXXXAVELF 359
N + +I++ R G L + VFD M V +SV S+TA ++EL
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 360 DEMVRSGVRPDRTVFVTVLSACSHAGLTDKG-LHYFDEMERKYGLQPGPEHYSCLVDLLG 418
D M + P + TV++AC+ GL +G L F EM R G+QP Y+ L+
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTLLSACA 258
Query: 419 RAGRLKEAMDLIKSMKVKPDGAV 441
G EA + ++M DG +
Sbjct: 259 IRGLGDEAEMVFRTMN---DGGI 278