Miyakogusa Predicted Gene
- Lj0g3v0339749.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0339749.1 52669_g.1
(195 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 3e-58
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 173 5e-44
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 2e-43
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 8e-43
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 1e-42
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 3e-42
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 3e-42
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 8e-42
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 3e-41
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 4e-41
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 1e-40
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 1e-40
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 2e-40
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 5e-40
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 159 1e-39
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 1e-39
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-39
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 4e-39
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 4e-39
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 4e-39
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 157 6e-39
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 7e-39
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 2e-38
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 2e-38
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 5e-38
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 6e-38
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 153 8e-38
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 8e-38
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 153 9e-38
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 9e-38
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 152 2e-37
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 2e-37
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 151 2e-37
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 3e-37
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 151 3e-37
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 151 3e-37
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 3e-37
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 150 5e-37
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 149 9e-37
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 1e-36
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 2e-36
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 2e-36
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 3e-36
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-36
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 147 3e-36
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 147 3e-36
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 4e-36
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 4e-36
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 4e-36
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 147 4e-36
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 5e-36
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 6e-36
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 6e-36
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 6e-36
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 146 8e-36
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 146 1e-35
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-35
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-35
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 144 3e-35
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 144 3e-35
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 144 4e-35
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 4e-35
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 5e-35
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 5e-35
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 5e-35
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 5e-35
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 7e-35
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 7e-35
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 7e-35
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 143 8e-35
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 1e-34
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 1e-34
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 1e-34
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 142 1e-34
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-34
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 4e-34
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 4e-34
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 4e-34
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 5e-34
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 5e-34
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 5e-34
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 139 9e-34
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 138 2e-33
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 3e-33
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 3e-33
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 4e-33
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 4e-33
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 137 6e-33
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 6e-33
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 7e-33
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 7e-33
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 136 1e-32
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-32
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 2e-32
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 2e-32
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 3e-32
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 3e-32
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 3e-32
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 5e-32
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 6e-32
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 7e-32
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 7e-32
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 8e-32
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-31
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-31
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-31
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 3e-31
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 3e-31
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 5e-31
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 6e-31
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 6e-31
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 6e-31
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 8e-31
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 8e-31
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 9e-31
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 1e-30
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 1e-30
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 129 1e-30
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 2e-30
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 2e-30
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-30
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 2e-30
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-30
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 3e-30
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 3e-30
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 3e-30
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 3e-30
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 5e-30
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 126 8e-30
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 1e-29
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 1e-29
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-29
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-29
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 125 3e-29
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-29
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 4e-29
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-29
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 4e-29
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 8e-29
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-28
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 3e-28
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-28
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-28
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 120 4e-28
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 5e-28
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-28
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-28
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 118 2e-27
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-27
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-27
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-27
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 118 2e-27
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 3e-27
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-27
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-27
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 5e-27
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 5e-27
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 5e-27
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 7e-27
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 2e-26
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 6e-26
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 112 1e-25
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-25
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 3e-25
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-25
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-25
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 5e-24
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 100 1e-21
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 3e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 8e-19
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 7e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-15
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 67 6e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 4e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 9e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 60 1e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 4e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 58 4e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 7e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 8e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 57 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 56 1e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 55 2e-08
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 4e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 7e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 2e-07
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 53 2e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 53 2e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 52 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 52 3e-07
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 52 3e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 5e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 5e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 9e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 49 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 2e-06
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 49 2e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 49 3e-06
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 4e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 4e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 6e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 6e-06
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 47 7e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 7e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 1e-05
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 1e-05
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 47 1e-05
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 140/193 (72%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD VVGTAL+ MYA+ GC+E +LEVF +KE+DTASWTS+I GLAMNG + +AL+L+ M
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E +G + D +TF+AVL+AC+H G V EGRK+FHSM+ ++++P EH IDLL RAGL
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAEEL+ K+ ++DE +VP+Y +LLSA R YGN+ + ER+A L V+
Sbjct: 432 LDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLL 491
Query: 182 XXIYASADRWEDV 194
+YASA+RWEDV
Sbjct: 492 ASVYASANRWEDV 504
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 32/161 (19%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLA------------------- 46
+G AL+ M+ + GC++K+ VF+ +++K+ WTS++ G
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 47 -------MNG-----KTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 94
MNG + ++ALELF M+T G +PD+ +++L+ C+ G +E+G K H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIH 302
Query: 95 SMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 135
+ + + +D+ + G + A E+ ++ ++
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D+ V +L+ MYA G +E + +VF+ + ++D SW +I NG+ A+ +F+ M
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ K D+ T ++ LSACS +E G +++ + + + M + + +D+ + G
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGC 197
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
L +A + + D+ V + +++ + G ID
Sbjct: 198 LDKARAVFDSMRDKN----VKCWTSMVFGYVSTGRID 230
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 173 bits (439), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V+G+ALI MY++ G +EK++ VF L ++ +W+++I G A++G+ A++ F M
Sbjct: 307 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 366
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G +P DV +I +L+ACSH GLVEEGR+ F M S ++P +EHYG +DLLGR+GL
Sbjct: 367 RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGL 426
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAEE + +P + D++I ++ALL ACR GN++MG+R+A L ++
Sbjct: 427 LDEAEEFILNMPIKPDDVI---WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVAL 483
Query: 182 XXIYASADRWEDVN 195
+YAS W +V+
Sbjct: 484 SNMYASQGNWSEVS 497
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V+ +I Y + G + + +F+ ++++ SW ++I G ++NG A+E+F M+
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+P+ VT ++VL A S G +E G L H + ++ + ID+ + G++
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWL-HLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 123 HEAEELVRKLPDQT 136
+A + +LP +
Sbjct: 326 EKAIHVFERLPREN 339
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA + +LI MYA++G + +S +VFNGLKEK TASW ++I G ++G +A++LFE M+
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ 690
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PDD+TF+ VL+AC+H+GL+ EG + M S++ +KPNL+HY ID+LGRAG L
Sbjct: 691 RTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 750
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A +V + + ++E V ++++LLS+CR + N++MGE++A L ++
Sbjct: 751 DKALRVVAE--EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 183 XIYASADRWEDV 194
+YA +WEDV
Sbjct: 809 NLYAGLGKWEDV 820
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAM 61
D V+ T +I MYA G + S VF+ L+ K+ W ++I + N ++ LE F E +
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKL-FHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
T PD T+ V+ AC AG+ + G L H + + ++ + G G
Sbjct: 179 STTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 121 LLHEAEELVRKLPDQT 136
+ +A +L +P++
Sbjct: 237 FVTDALQLFDIMPERN 252
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ +V A + YA+ G + + VF+G++ K SW ++I G A + +L+ M+
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PD T ++LSACS + G+++ H ++ +L Y + L G L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEV-HGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 123 HEAEELVRKLPDQT 136
+ L + D++
Sbjct: 548 CTVQALFDAMEDKS 561
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAM 61
D VG AL+ Y G V +L++F+ + E++ SW S+I + NG + ++ L E M
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 62 ETLG---AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E G PD T + VL C+ + G+ + H + + L +D+ +
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSK 339
Query: 119 AGLLHEAEELVR 130
G + A+ + +
Sbjct: 340 CGCITNAQMIFK 351
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V+ AL+ MY++ GC+ + +F K+ SW +++ G + G T+ ++ M
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 65 G--AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G K D+VT + + C H + ++L H S N F+ + G L
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKEL-HCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 123 HEAEELVRKLPDQT 136
A+ + + +T
Sbjct: 447 SYAQRVFHGIRSKT 460
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 169 bits (429), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 115/192 (59%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG +LI MY + GCVE+ VF + E+D SW ++I G A NG N+ALELF M
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD +T I VLSAC HAG VEEGR F SM+ + + P +HY +DLLGRAG L
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA+ ++ ++P Q D +I + +LL+AC+ + NI +G+ +A L V+
Sbjct: 546 EEAKSMIEEMPMQPDSVI---WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLS 602
Query: 183 XIYASADRWEDV 194
+YA +WEDV
Sbjct: 603 NMYAELGKWEDV 614
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 71/131 (54%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G+AL+ MY++ G V + VF+ + +++ SW S+I NG +AL++F+ M
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+PD+VT +V+SAC+ ++ G+++ + ++ ++ F+D+ + +
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 123 HEAEELVRKLP 133
EA + +P
Sbjct: 306 KEARFIFDSMP 316
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V T L K+ G ++++ +F + E+D +W S++ G A + + +AL F M G
Sbjct: 92 VVTGLTKL----GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEG 147
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
++ +F +VLSACS + +G ++ HS+ + ++ +D+ + G +++A
Sbjct: 148 FVLNEYSFASVLSACSGLNDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206
Query: 126 EELVRKLPDQT 136
+ + ++ D+
Sbjct: 207 QRVFDEMGDRN 217
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ + T++I YA + + + +F + E++ SW ++I G NG+ +AL LF ++
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 63 TLGAKPDDVTFIAVLSACS-----HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
P +F +L AC+ H G+ L H + ++ ID+
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 118 RAGLLHEAEELVRKLPDQ 135
+ G + E + RK+ ++
Sbjct: 439 KCGCVEEGYLVFRKMMER 456
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 122/193 (63%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
V+ ++GTAL+ M+ + G +EK++ VF GL E D+ SW+SII GLA++G +KA+ F M
Sbjct: 282 VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+LG P DVTF AVLSACSH GLVE+G +++ +M + ++P LEHYG +D+LGRAG
Sbjct: 342 ISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGK 401
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAE + K+ + + P+ ALL AC+ Y N ++ ER+ L VK
Sbjct: 402 LAEAENFILKMHVKPN---APILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLL 458
Query: 182 XXIYASADRWEDV 194
IYA A +W+ +
Sbjct: 459 SNIYACAGQWDKI 471
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T+++ Y + G VE + E+F+ + ++ +W+ +I G A N KA++LFE M+
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G ++ ++V+S+C+H G +E G + + + + HM NL +D+ R G +
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS-HMTVNLILGTALVDMFWRCGDI 300
Query: 123 HEAEELVRKLPDQTDEI 139
+A + LP +TD +
Sbjct: 301 EKAIHVFEGLP-ETDSL 316
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 5/168 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+DA++GTAL+ MYA+ G +EK++E+FN +K+KD SWT++I G +G +A+ LF M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 62 E--TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
E +P+++TF+ VL+ACSH GLV EG + F M Y P +EHYG +DLLGRA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
G L EA EL+R LP +D +RALL+ACR YGN D+GE + L
Sbjct: 481 GQLEEAYELIRNLPITSDS---TAWRALLAACRVYGNADLGESVMMRL 525
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
TALI MY ++G + + +F+ KD +W +I A G + + L M+ K
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 68 PDDVTFIAVLSACSH----------AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
P+ TF+ +LS+C++ A L+EE R ++ T +D+
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGT-----------ALVDMYA 374
Query: 118 RAGLLHEAEELVRKLPDQ 135
+ GLL +A E+ ++ D+
Sbjct: 375 KVGLLEKAVEIFNRMKDK 392
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 167 bits (424), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 119/193 (61%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ + TAL+ MY++ G ++K+LEVF ++D ++W SII L+++G ALE+F M
Sbjct: 337 IEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KP+ +TFI VLSAC+H G++++ RKLF MSS Y ++P +EHYG +DLLGR G
Sbjct: 397 VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGK 456
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
+ EAEELV ++P I L +LL AC+ +G ++ ER+A L +
Sbjct: 457 IEEAEELVNEIPADEASI---LLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQM 513
Query: 182 XXIYASADRWEDV 194
+YAS RWE V
Sbjct: 514 SNLYASDGRWEKV 526
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D V L+ +Y +SG E + +V + + +D SW S++ G ++A LF+
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
ME + ++ ++S + AGLV+E +++F SM ++ + + G
Sbjct: 232 MEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVR-----DVVSWNAMVTAYAHVG 282
Query: 121 LLHEAEELVRK-LPDQTDEIIVPLYRALLSACRTYGNIDMGE 161
+E E+ K L D T++ ++LSAC + G++ GE
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 166 bits (420), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 124/191 (64%), Gaps = 3/191 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D+V+G LI MYA+ G +E++LEVF +K+K +WT++I G A +G +A+ F M
Sbjct: 280 MDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEM 339
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ +G KP+ +TF AVL+ACS+ GLVEEG+ +F+SM Y++KP +EHYG +DLLGRAGL
Sbjct: 340 QKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGL 399
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA+ ++++P + + +I + ALL ACR + NI++GE + L +
Sbjct: 400 LDEAKRFIQEMPLKPNAVI---WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHK 456
Query: 182 XXIYASADRWE 192
I+A +W+
Sbjct: 457 ANIHAMDKKWD 467
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V ++IK Y ++G ++ +L +F + EK+ SWT++I G +AL+LF M+
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+PD+V+ LSAC+ G +E+G K HS + ++ + ID+ + G +
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEM 298
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
EA E+ + + ++ V + AL+S +G+
Sbjct: 299 EEALEVFKNIKKKS----VQAWTALISGYAYHGH 328
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 164 bits (415), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 123/192 (64%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VVG ALI MY + GC EK+ +VF+ + ++D +WT+++ GLA NG+ +A+++F M+
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ 461
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ +PDD+T++ VLSAC+H+G+V++ RK F M S + ++P+L HYG +D+LGRAGL+
Sbjct: 462 DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLV 521
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA E++RK+P + I+ + ALL A R + + M E A + ++
Sbjct: 522 KEAYEILRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
Query: 183 XIYASADRWEDV 194
IYA RW+D+
Sbjct: 579 NIYAGCKRWKDL 590
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + T+++K Y + G ++ + F+ + +D SWT +I G G N++LE+F M+
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQ 360
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G PD+ T ++VL+AC+H G +E G + + +K ++ ID+ + G
Sbjct: 361 SAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCS 419
Query: 123 HEAEELVRKLPDQTDEI 139
+A+++ + DQ D+
Sbjct: 420 EKAQKVFHDM-DQRDKF 435
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V AL+KMY+ G ++ + VF+ ++D SW +I G + +++EL ME
Sbjct: 172 VQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL 231
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P VT + VLSACS + +++ H S +P+L ++ G + A
Sbjct: 232 VSPTSVTLLLVLSACSKVKDKDLCKRV-HEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 126 EELVRKLPDQTDEI----IVPLY--RALLSACRTY-GNIDMGERLATTL 167
+ R + + D I IV Y R L RTY + + +R++ T+
Sbjct: 291 VRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 164 bits (414), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 121/192 (63%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +VGT++I MY + G VE + + F+ +K K+ SWT++I G M+G KALELF AM
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P+ +TF++VL+ACSHAGL EG + F++M + ++P LEHYG +DLLGRAG L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A +L++++ + D II + +LL+ACR + N+++ E L +
Sbjct: 441 QKAYDLIQRMKMKPDSII---WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 183 XIYASADRWEDV 194
IYA A RW+DV
Sbjct: 498 HIYADAGRWKDV 509
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +ALI MY+ G +E + +VF+ + +++ SWTS+I G +NG A+ LF+ +
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 63 TLGAKPDDVTF------IAVLSACSHA---GLVE 87
DD F ++V+SACS GL E
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ ALI MYA+ V + ++F+ ++ +D SWTS+I G+A +G+ KAL L++ M + G
Sbjct: 275 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP++VTF+ ++ ACSH G VE+GR+LF SM+ Y ++P+L+HY +DLLGR+GLL EA
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL-TNVKXXXXXXXXXXXXI 184
E L+ +P DE P + ALLSAC+ G MG R+A L ++ K I
Sbjct: 395 ENLIHTMPFPPDE---PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 451
Query: 185 YASADRWEDVN 195
YASA W V+
Sbjct: 452 YASASLWGKVS 462
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ L+ +Y + G +L+VF+ + +D +W S++ L + K L +F ++ +
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 66 A-KPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+PDD F A++ AC++ G ++ GR++ H + S Y ++ +D+ + GLL+
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK--SSLVDMYAKCGLLN 157
Query: 124 EAE 126
A+
Sbjct: 158 SAK 160
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VV ++L+ MYA+ G + + VF+ ++ K+T SWT+++ G A +G+ +ALELF +
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
+ ++ A++S G V+ G+ L
Sbjct: 199 V----KNLYSWTALIS-----GFVQSGKGL 219
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ + TA++ YA+SG E++LE+F L K+ SWT++I G +GK +A +F M
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Query: 63 TLGAKP-DDVTFIAVLSACSHAGLVEEGRKL 92
D + +++ AC++ GR++
Sbjct: 230 RERVDILDPLVLSSIVGACANLAASIAGRQV 260
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 123/188 (65%), Gaps = 3/188 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ A+I MYA+SG + K+L+VF + E++ +WT+II GLA +G +AL +F M G
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+DVTFIA+LSACSH G V+ G++LF+SM S Y + PN+EHYG IDLLGRAG L EA
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+E+++ +P + + I + +LL+A + ++++GER + L ++ +Y
Sbjct: 407 DEVIKSMPFKANAAI---WGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 186 ASADRWED 193
++ RW++
Sbjct: 464 SNLGRWDE 471
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK--EKDTASWTSIICGLAMNGKTNKALELFEA 60
D V AL+ Y + G ++++ + + ++ SWT +I G A +G+ ++A+E+F+
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M +PD+VT +AVLSAC+ G +E G ++ S M + ID+ ++G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERIC-SYVDHRGMNRAVSLNNAVIDMYAKSG 299
Query: 121 LLHEAEELVRKLPDQT----DEIIVPL---------------------------YRALLS 149
+ +A ++ + ++ II L + A+LS
Sbjct: 300 NITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS 359
Query: 150 ACRTYGNIDMGERLATTL 167
AC G +D+G+RL ++
Sbjct: 360 ACSHVGWVDLGKRLFNSM 377
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +GTA++ MYA+ G +E +LE+FNG++ K+ +W +++ GLA++G ++L FE M
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSST-YHMKPNLEHYGGFIDLLGRAGL 121
LG KP+ VTF+A L+AC H GLV+EGR+ FH M S Y++ P LEHYG IDLL RAGL
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNI-DMGERLATTLTNVKXXXXXXXXX 180
L EA ELV+ +P + D V + A+LSAC+ G + ++ + + + +++
Sbjct: 460 LDEALELVKAMPVKPD---VRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVL 516
Query: 181 XXXIYASADRWEDV 194
I+A+ RW+DV
Sbjct: 517 LSNIFAANRRWDDV 530
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LG 65
G ALI MY + + ++ VF L++KD SW S+I GL ++ +A++LF M+T G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD +VLSAC+ G V+ GR + H T +K + +D+ + G + A
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWV-HEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
E+ + + V + ALL +G+
Sbjct: 361 LEIFNGIRSKN----VFTWNALLGGLAIHGH 387
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +L+ Y G + +VF + +D SWT II G G +AL+ F M+
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+P+ T++ VL + G + G+ + H + +LE ID+ + L
Sbjct: 200 V---EPNLATYVCVLVSSGRVGCLSLGKGI-HGLILKRASLISLETGNALIDMYVKCEQL 255
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATT 166
+A + +L + + L+ R+ ID+ + T+
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTS 299
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 160 bits (405), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 119/191 (62%), Gaps = 3/191 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ +V AL+ MYA+ G + + VF +++KD SW SII G M+G KAL +F+ M
Sbjct: 468 NILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G PD + +AVLSACSHAGLVE+GR++F+SMS + ++P EHY +DLLGR G L
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFL 587
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA E+V+ +P + V + ALL++CR + N+D+ E +A+ L+ ++
Sbjct: 588 KEASEIVKNMPMEPK---VCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLS 644
Query: 183 XIYASADRWED 193
IY++ RWE+
Sbjct: 645 NIYSAGGRWEE 655
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 34/167 (20%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V L+ +Y ++G + + +F + ++ SW +I G + A+++FE M+
Sbjct: 195 VVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREE 254
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSST-------------------------- 99
KPD+VT+ +VLS S G E+ K FH M +
Sbjct: 255 FKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAE 314
Query: 100 ----YHMKPNLEHY----GGFIDLLGRAGLLHEAEELVRKLPDQTDE 138
Y +K E Y I + G+ G + +AE L R++ ++ E
Sbjct: 315 KVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKE--------KDTASWTSIICGLAMNGKTNKALELFE 59
+LI + +G ++++L +F+ L+E + +WTS+I G + G+ + +LE F
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
M+ + VT +LS C+ + GR++ H M N+ +++ +
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREI-HGHVIRTSMSENILVQNALVNMYAKC 482
Query: 120 GLLHEAEELVRKLPDQ 135
GLL E + + D+
Sbjct: 483 GLLSEGSLVFEAIRDK 498
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL--- 64
ALI +Y + G V+ + +F ++ K SW S+I GK ++AL LF +E +
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 65 -GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
K + VT+ +V+ C+ G ++ + F M
Sbjct: 393 CNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 120/187 (64%), Gaps = 3/187 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T+LI MYA+ G +E + +VFN + K +SW ++I G AM+G+ + + +LF M +G +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
PDD+TF+ +LSACSH+G+++ GR +F +M+ Y M P LEHYG IDLLG +GL EAEE
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYAS 187
++ + + D +I + +LL AC+ +GN+++GE A L ++ IYAS
Sbjct: 528 MINMMEMEPDGVI---WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYAS 584
Query: 188 ADRWEDV 194
A RW +V
Sbjct: 585 AGRWNEV 591
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TALIK YA G +E + ++F+ + KD SW ++I G A G +ALELF+ M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+PD+ T + V+SAC+ +G +E GR++ H + NL+ IDL + G L
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 123 HEAEELVRKLP 133
A L +LP
Sbjct: 318 ETACGLFERLP 328
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 50/203 (24%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
ALI +Y++ G +E + +F L KD SW ++I G +AL LF+ M G
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 68 PDDVTFIAVLSACSHAGLVEEGR-------KLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
P+DVT +++L AC+H G ++ GR K +++ ++ +L ID+ + G
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL------IDMYAKCG 418
Query: 121 LLHEAEEL----------------------------------VRKLPDQTDEIIVPLYRA 146
+ A ++ +RK+ Q D+I +
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT---FVG 475
Query: 147 LLSACRTYGNIDMGERLATTLTN 169
LLSAC G +D+G + T+T
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQ 498
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 23 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 82
++ VF ++E + W ++ G A++ AL+L+ M +LG P+ TF VL +C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 83 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 142
+ +EG+++ H +L + I + + G L +A ++ K P + V
Sbjct: 147 SKAFKEGQQI-HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD----VV 201
Query: 143 LYRALLSACRTYGNIDMGERL 163
Y AL+ + G I+ ++L
Sbjct: 202 SYTALIKGYASRGYIENAQKL 222
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 119/189 (62%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ ALI MYA+ G ++ + +VF + ++ SW+S+I L+M+G+ + AL LF M+
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P++VTF+ VL CSH+GLVEEG+K+F SM+ Y++ P LEHYG +DL GRA LL EA
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E++ +P ++ +I + +L+SACR +G +++G+ A + ++ IY
Sbjct: 501 LEVIESMPVASNVVI---WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIY 557
Query: 186 ASADRWEDV 194
A RWEDV
Sbjct: 558 AREQRWEDV 566
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V TA++ Y++ G ++ + +F+ ++KD WT++I + +AL +FE M G
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD V+ +V+SAC++ G++++ K HS ++ L I++ + G L
Sbjct: 340 IKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 126 EELVRKLPDQT 136
++ K+P +
Sbjct: 399 RDVFEKMPRRN 409
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D V T + MYA G + + VF+ + +D +W ++I G ++A +LFE
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRA 119
M+ PD++ ++SAC G + R ++ + + M +L + + A
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL--LTALVTMYAGA 260
Query: 120 GLLHEAEELVRKL 132
G + A E RK+
Sbjct: 261 GCMDMAREFFRKM 273
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 122/194 (62%), Gaps = 4/194 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
V + ALI MYA+ G +++++EVF G+K++D ++W ++I GLA++ ++E+FE M
Sbjct: 313 VGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEM 371
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ L P++VTFI V+ ACSH+G V+EGRK F M Y+++PN++HYG +D+LGRAG
Sbjct: 372 QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQ 431
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA V + + + I+ +R LL AC+ YGN+++G+ L +++
Sbjct: 432 LEEAFMFVESMKIEPNAIV---WRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLL 488
Query: 182 XXIYASADRWEDVN 195
IYAS +W+ V
Sbjct: 489 SNIYASTGQWDGVQ 502
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +I + ++ + E+F+ EKD +W ++I G G +AL +F+ M
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR 267
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLF------HSMSSTYHMKPNLEHYGGFIDLL 116
G PD VT +++LSAC+ G +E G++L S+SS+ ++ + + ID+
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI--WNALIDMY 325
Query: 117 GRAGLLHEAEELVRKLPDQ 135
+ G + A E+ R + D+
Sbjct: 326 AKCGSIDRAIEVFRGVKDR 344
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+++ V ALI +A G + + E+F+ + +W+S+ G A GK ++A+ LF+
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M D V + +++ C ++ R+LF + + ++ + I G
Sbjct: 204 M----PYKDQVAWNVMITGCLKCKEMDSARELFDRFT-----EKDVVTWNAMISGYVNCG 254
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
EA + +++ D + V +LLSAC G+++ G+RL
Sbjct: 255 YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 118/194 (60%), Gaps = 4/194 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA VG +L+ MY+ SG V ++ VF + +K SW SII G A +G+ A +F M
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS-TYHMKPNLEHYGGFIDLLGRAGL 121
L +PD++TF +LSACSH G +E+GRKLF+ MSS H+ ++HY +D+LGR G
Sbjct: 420 RLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGK 479
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAEEL+ ++ + +E++ + ALLSACR + ++D GE+ A + N+
Sbjct: 480 LKEAEELIERMVVKPNEMV---WLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLL 536
Query: 182 XXIYASADRWEDVN 195
IYASA RW +V+
Sbjct: 537 SNIYASAGRWSNVS 550
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +++ Y Q G V+ +L++F + K+ SWT++ICGL N ++ +AL+LF+ M
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 63 TLGAKPDDVTFIAVLSACSHA 83
K F V++AC++A
Sbjct: 218 RCCIKSTSRPFTCVITACANA 238
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T +I Y +S + +L +F+ + +D SW S+I G G N A++LF+ M
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
V++ A+++ C +G V++ +LF+ M
Sbjct: 129 ---VSWTAMVNGCFRSGKVDQAERLFYQM 154
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ + V +LI YA + S +VF+ + A WT+++ G ++N K AL +F
Sbjct: 257 LYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSG 316
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
M P+ TF + L++CS G ++ G+++
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGT+L+ MYA+ G ++ + +F ++ + +W +++ GLA +G+ + L+LF+ M+
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+LG KPD VTFI VLSACSH+GLV E K SM Y +KP +EHY D LGRAGL+
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+AE L+ + + E +YR LL+ACR G+ + G+R+AT L ++
Sbjct: 772 KQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 183 XIYASADRWEDV 194
+YA+A +W+++
Sbjct: 829 NMYAAASKWDEM 840
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V + ++ MY + G + + F+ + D +WT++I G NG+ +A +F M
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+G PD+ T + A S +E+GR++ H+ + + + +D+ + G
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 122 LHEAEELVRKL 132
+ +A L +++
Sbjct: 669 IDDAYCLFKRI 679
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI MY + + VF+ + E+D SW S+I G+A NG +A+ LF + G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 66 AKPDDVTFIAVLSACS 81
KPD T +VL A S
Sbjct: 412 LKPDQYTMTSVLKAAS 427
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+ V TALI Y+++ C+ K E+ D +W +++ G + +K L+LF M
Sbjct: 451 DSFVSTALIDAYSRNRCM-KEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + DD T V C + +G+++ +++ S Y + +L G +D+ + G
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGD 567
Query: 122 LHEAEELVRKLPDQTD 137
+ A+ +P D
Sbjct: 568 MSAAQFAFDSIPVPDD 583
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 118/192 (61%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+A V AL+ MYA+ G ++K+ +VFN + +KD SW +++ GL ++G +A+ELF M
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD VTFIAVL +C+HAGL++EG F+SM Y + P +EHYG +DLLGR G L
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRL 468
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA ++V+ +P + + +I + ALL ACR + +D+ + + L +
Sbjct: 469 KEAIKVVQTMPMEPNVVI---WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLS 525
Query: 183 XIYASADRWEDV 194
IYA+A+ WE V
Sbjct: 526 NIYAAAEDWEGV 537
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFN--GLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ V + ++ Y+++G +E + +F+ L K+ +WT II G A G +A L +
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G K D I++L+AC+ +GL+ G ++ HS+ ++ N +D+ + G
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 121 LLHEAEELVRKLPDQ 135
L +A ++ +P +
Sbjct: 365 NLKKAFDVFNDIPKK 379
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +++ ++G + + +F+ + ++D SW +++ G A + +KA ELFE M
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM- 242
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ + V++ ++ S AG +E R +F M N+ + I GLL
Sbjct: 243 ---PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP---AKNVVTWTIIIAGYAEKGLL 296
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
EA+ LV ++ + ++L+AC G + +G R+ + L
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ +GT+L+ MYA+ G + ++L VF+G++ +++ ++T+II GLA++G + A+ F M
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM 481
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G PD++TFI +LSAC H G+++ GR F M S +++ P L+HY +DLLGRAGL
Sbjct: 482 IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA+ L+ +P + D + + ALL CR +GN+++GE+ A L +
Sbjct: 542 LEEADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLL 598
Query: 182 XXIYASADRWED 193
+Y A+ WED
Sbjct: 599 DGMYGEANMWED 610
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V A I M+A G +E + +VF+ +D SW +I G G+ KA+ +++ ME+ G
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG 252
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPDDVT I ++S+CS G + G++ F+ ++ + +D+ + G +HEA
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKE-FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
R++ D ++ + + ++S G +D+ +L
Sbjct: 312 ----RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V T +I YA+ G ++ S ++F+ ++EKD W ++I G + AL LF+ M+T
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
KPD++T I LSACS G ++ G H Y + N+ +D+ + G + E
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 125 A 125
A
Sbjct: 443 A 443
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 156 bits (395), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDT-ASWTSIICGLAMNGKTNKALELFEAMETL 64
V ALI MY++ G V + VF G++EK SWTS+I GLAM+G+ +A+ LF M
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G PD ++FI++L ACSHAGL+EEG F M YH++P +EHYG +DL GR+G L +
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A + + ++P I+ +R LL AC ++GNI++ E++ L +
Sbjct: 426 AYDFICQMPIPPTAIV---WRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNA 482
Query: 185 YASADRWEDV 194
YA+A +W+DV
Sbjct: 483 YATAGKWKDV 492
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 14 YAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 73
Y ++G +E + +F+ + +D SW+++I G+A NG N++ F ++ G P++V+
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 74 IAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG------------- 120
VLSACS +G E G K+ H + ID+ R G
Sbjct: 273 TGVLSACSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 331
Query: 121 ---------------LLH-EAEELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGE 161
+H + EE VR + T + P + +LL AC G I+ GE
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 162 RLATTLTNV 170
+ + V
Sbjct: 392 DYFSEMKRV 400
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V ALI MYA++G + + F+ ++ E+DT SWTS+I LA +G +ALELFE M
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G +PD +T++ V SAC+HAGLV +GR+ F M + P L HY +DL GRAGLL E
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A+E + K+P + D V + +LLSACR + NID+G+ A L ++ +
Sbjct: 570 AQEFIEKMPIEPD---VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 185 YASADRWED 193
Y++ +WE+
Sbjct: 627 YSACGKWEE 635
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
++ Y++ G ++ + E F+ L ++D+ SWT++I G G+ +KA+ + M G +P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
T VL++ + +E G+K+ HS ++ N+ +++ + G
Sbjct: 146 QFTLTNVLASVAATRCMETGKKV-HSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGA 66
A+I ++ Q G ++ ++ F + E+D +W S+I G G +AL++F M ++L
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL-L 275
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
PD T +VLSAC++ + G+++ HS T + I + R G + A
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQI-HSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 127 ELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 169
L+ + T ++ + + ALL G+++ + + +L +
Sbjct: 335 RLIEQ--RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
TAL+ Y + G + ++ +F LK++D +WT++I G +G +A+ LF +M G +
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHS 95
P+ T A+LS S + G+++ S
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGS 438
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G++L+ MYA+ G + + VF+ ++EK+ SWTS+I G NG +ALELF M+
Sbjct: 310 MGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+ VTF+ LSACSH+GLV++G ++F SM Y MKP +EHY +DL+GRAG L++A
Sbjct: 370 IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKA 429
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXX-XXXXXXXI 184
E R +P++ D I + ALLS+C +GN+++ A+ L + +
Sbjct: 430 FEFARAMPERPDSDI---WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNV 486
Query: 185 YASADRWEDVN 195
YAS D+W++V+
Sbjct: 487 YASNDKWDNVS 497
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 41/194 (21%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNK-ALELFEAM 61
+ V T++I Y G VE + E+FN K KD + +++ G + +G+T K +++++ +M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 62 ETLGAKPDDVTFIAVLSACS-----------HAGLVEEG--------------------- 89
+ G P+ TF +V+ ACS HA +++ G
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 90 ---RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 146
R++F M + N+ + ID G+ G EA EL ++ + E +
Sbjct: 325 NDARRVFDQMQ-----EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 147 LLSACRTYGNIDMG 160
LSAC G +D G
Sbjct: 380 ALSACSHSGLVDKG 393
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 115/190 (60%), Gaps = 4/190 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ L+ MY++ G ++K+ +VF G++E++ SWT++I GLAMNG +A+E F M G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
P++ T +LSACSH+GLV EG F M S + +KPNL HYG +DLLGRA LL +
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A L++ + + D I +R LL ACR +G++++GER+ + L +K
Sbjct: 374 AYSLIKSMEMKPDSTI---WRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 185 YASADRWEDV 194
Y++ +WE V
Sbjct: 431 YSTVGKWEKV 440
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D+++ T L+ +Y+ + +VF+ + ++DT SW + N +T L LF+
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDK 204
Query: 61 METL---GAKPDDVTFIAVLSACSHAGLVEEGRKL 92
M+ KPD VT + L AC++ G ++ G+++
Sbjct: 205 MKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 153 bits (387), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 121/193 (62%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ +V T+L+ MY + GC++K+L +F +++++ +++++I GLA++G+ AL +F M
Sbjct: 267 LNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G +PD V +++VL+ACSH+GLV+EGR++F M ++P EHYG +DLLGRAGL
Sbjct: 327 IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGL 386
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA E ++ +P + +++I +R LS CR NI++G+ A L +
Sbjct: 387 LEEALETIQSIPIEKNDVI---WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLI 443
Query: 182 XXIYASADRWEDV 194
+Y+ W+DV
Sbjct: 444 SNLYSQGQMWDDV 456
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D V +LI MY + G +E S VF L+ K ASW+S++ A G ++ L LF M
Sbjct: 166 DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMC 225
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
K ++ ++ L AC++ G + G + H + N+ +D+ + G
Sbjct: 226 SETNLKAEESGMVSALLACANTGALNLGMSI-HGFLLRNISELNIIVQTSLVDMYVKCGC 284
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
L +A + +K+ + + Y A++S +G + R+ + +
Sbjct: 285 LDKALHIFQKMEKRNN----LTYSAMISGLALHGEGESALRMFSKM 326
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 153 bits (386), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 6/189 (3%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTAS---WTSIICGLAMNGKTNKALELFEAMETLG 65
A+I MYA+ G +E +L +F+ K +++ W +IICG A +G AL+L+ +++L
Sbjct: 478 AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP 537
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP+ +TF+ VLSAC HAGLVE G+ F SM S + ++P+++HYG +DLLG+AG L EA
Sbjct: 538 IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEA 597
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+E+++K+P + D V ++ LLSA RT+GN+++ E AT L + +Y
Sbjct: 598 KEMIKKMPVKAD---VMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVY 654
Query: 186 ASADRWEDV 194
A A RWEDV
Sbjct: 655 ADAGRWEDV 663
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLGA 66
ALI + ++G VE++ EVF+ +KD SW ++I G A + AL LF E + +
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
KPD +T ++V SA S G +EEG++ H + + PN ID+ + G + A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRA-HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 127 ELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV 170
+ + + + I P + A++ T+G+ + L + L ++
Sbjct: 494 NIFHQTKNISSSTISP-WNAIICGSATHGHAKLALDLYSDLQSL 536
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 44/192 (22%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D+ ++ Y +S + +L++F+ + E+ S+T++I G A N + ++A+ELF M
Sbjct: 105 LDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM 164
Query: 62 ETLGAKPDDVTFIAVLSACSHAG-----------------------------------LV 86
LG ++VT V+SACSH G +
Sbjct: 165 RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCL 224
Query: 87 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 146
++ RKLF M + NL + ++ +AGL+ +AEEL DQ E + +
Sbjct: 225 KDARKLFDEMP-----ERNLVTWNVMLNGYSKAGLIEQAEELF----DQITEKDIVSWGT 275
Query: 147 LLSACRTYGNID 158
++ C +D
Sbjct: 276 MIDGCLRKNQLD 287
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V ++ Y+++G +E++ E+F+ + EKD SW ++I G + ++AL + M
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 299
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G KP +V + +LSA + + +G +L
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQL 327
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 153 bits (386), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG AL+ MY + G +E++ ++F + KD SW ++I G + +G AL FE+M+ G
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPDD T +AVLSACSH GLV++GR+ F++M+ Y + PN +HY +DLLGRAGLL +A
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
L++ +P + D I + LL A R +GN ++ E A + ++ +Y
Sbjct: 566 HNLMKNMPFEPDAAI---WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 186 ASADRWEDV 194
AS+ RW DV
Sbjct: 623 ASSGRWGDV 631
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+I YAQ G + ++ +F+ + ++D SW ++I G + +G + +AL LF ME G +
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKL 92
+ +F + LS C+ +E G++L
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQL 431
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +I YAQSG ++++ ++F+ +D +WT+++ G N +A ELF+ M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM- 307
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ ++V++ A+L+ +E ++LF M N+ + I + G +
Sbjct: 308 ---PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKI 359
Query: 123 HEAEELVRKLPDQ 135
EA+ L K+P +
Sbjct: 360 SEAKNLFDKMPKR 372
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ YAQ+GCV+ + VF+ + EK+ SW +++ N K +A LF++ E
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
V++ +L + E R+ F SM+ ++ + I ++G +
Sbjct: 216 NWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKI 266
Query: 123 HEAEELVRKLPDQ 135
EA +L + P Q
Sbjct: 267 DEARQLFDESPVQ 279
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D TA++ Y Q+ VE++ E+F+ + E++ SW +++ G + A ELF+ M
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
T+ +++ + G + E + LF M K + + I ++G
Sbjct: 340 CRNVS----TWNTMITGYAQCGKISEAKNLFDKMP-----KRDPVSWAAMIAGYSQSGHS 390
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 168
EA L ++ + + + + LS C +++G++L L
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +IK Y ++ + K+ E+F + E+D SW +++ G A NG + A +F+ M
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM- 183
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS 95
+ +DV++ A+LSA +EE LF S
Sbjct: 184 ---PEKNDVSWNALLSAYVQNSKMEEACMLFKS 213
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ AL+ MY + G +E +L VFN +KE+D +W+++I GLA NG + +AL+LFE M+
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G KP+ +T + VL ACSHAGL+E+G F SM Y + P EHYG IDLLG+AG L
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A +L+ ++ + D + +R LL ACR N+ + E A + +
Sbjct: 412 DDAVKLLNEMECEPDAVT---WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 183 XIYASADRWEDV 194
IYA++ +W+ V
Sbjct: 469 NIYANSQKWDSV 480
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +ALI ++A+ G E +L VF+ + D W SII G A N +++ ALELF+ M+
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHM---KPNLEHYGGFIDLLGRA 119
G + T +VL AC+ L+E G M + H+ +L +D+ +
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELG------MQAHVHIVKYDQDLILNNALVDMYCKC 306
Query: 120 GLLHEAEELVRKLPDQ 135
G L +A + ++ ++
Sbjct: 307 GSLEDALRVFNQMKER 322
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 124/193 (64%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ VGT+LI +Y++ GC+ + +VF+ + ++D + + ++I GLA++G + +EL++++
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ G PD TF+ +SACSH+GLV+EG ++F+SM + Y ++P +EHYG +DLLGR+G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAEE ++K+P + + L+R+ L + +T+G+ + GE L ++
Sbjct: 369 LEEAEECIKKMPVKPN---ATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 182 XXIYASADRWEDV 194
IYA +RW DV
Sbjct: 426 SNIYAGVNRWTDV 438
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V AL+ YA G + ++ +F ++E D A+W +++ A + + + E+
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN--LEHYGG--FIDLLGR 118
+ +P++++ +A++ +C++ G G + Y +K N L + G IDL +
Sbjct: 209 RMQVRPNELSLVALIKSCANLGEFVRG-----VWAHVYVLKNNLTLNQFVGTSLIDLYSK 263
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
G L RK+ D+ + V Y A++ +G
Sbjct: 264 CGCL----SFARKVFDEMSQRDVSCYNAMIRGLAVHG 296
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 3/188 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI MY++ G ++ + VFN ++ ++ SWTS+I G A +G + LE F M G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP++VT++A+LSACSH GLV EG + F+SM + +KP +EHY +DLL RAGLL +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E + +P Q D V ++R L ACR + N ++G+ A + + IY
Sbjct: 631 FEFINTMPFQAD---VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIY 687
Query: 186 ASADRWED 193
A A +WE+
Sbjct: 688 ACAGKWEE 695
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK---EKDTASWTSIICGLAMNGKTNKALELFE 59
D+V+ +LI +Y++SG K+ +VF ++ ++D SW++++ NG+ A+++F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
LG P+D + AV+ ACS++ V GR + T H + ++ ID+ +
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+ E K+ D+ E+ V + +++ C G
Sbjct: 216 ---ENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 115/191 (60%), Gaps = 6/191 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++A++ +AL+ +YA+ G + S EVF +K D + W ++I G A +G +A+ +F M
Sbjct: 198 LNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM 257
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E PD +TF+ +L+ CSH GL+EEG++ F MS + ++P LEHYG +DLLGRAG
Sbjct: 258 EAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGR 317
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
+ EA EL+ +P + D +I +R+LLS+ RTY N ++GE + N+
Sbjct: 318 VKEAYELIESMPIEPDVVI---WRSLLSSSRTYKNPELGE---IAIQNLSKAKSGDYVLL 371
Query: 182 XXIYASADRWE 192
IY+S +WE
Sbjct: 372 SNIYSSTKKWE 382
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA + AL+ MYA++G E + + F L++KDT +WT +I GLA +G N+AL +F+ M+
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ 410
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G A PD +T++ VL ACSH GLVEEG++ F M + ++P +EHYG +D+L RAG
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
EAE LV+ +P + + V ++ ALL+ C + N+++ +R+ + + +
Sbjct: 471 FEEAERLVKTMPVKPN---VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLL 527
Query: 182 XXIYASADRWEDV 194
IYA A RW DV
Sbjct: 528 SNIYAKAGRWADV 540
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ ++ T+LI MYA+ G + + +F+G+ E+ SW SII G + NG +AL +F M
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMK 103
LG PD VTF++V+ A G + G+ + +S T +K
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK 350
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
V+ V T L+ MY G V L VF + + + +W S+I G N + + A+E F M
Sbjct: 140 VNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF--------I 113
++ G K ++ + +L AC + G K FH P + GF I
Sbjct: 200 QSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 114 DLLGRAGLLHEAEELVRKLPDQT 136
D+ + G L A L +P++T
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERT 281
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 1/195 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+D+ + T L+ YA+ G ++ ++E+F +K +W ++I GLAM+G ++ F
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M + G KPD VTFI+VL CSH+GLV+E R LF M S Y + ++HYG DLLGRAG
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 121 LLHEAEELVRKLP-DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXX 179
L+ EA E++ ++P D + + + LL CR +GNI++ E+ A + +
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 180 XXXXIYASADRWEDV 194
+YA+A+RWE+V
Sbjct: 461 VMVEMYANAERWEEV 475
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V LI ++ + ++ E+F+ + +D SW S+I G A +A++LF+ M
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
LG KPD+V ++ LSAC+ +G ++G+ + H + + + G +D + G +
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAI-HDYTKRKRLFIDSFLATGLVDFYAKCGFI 300
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
A E+ D+T + + A+++ +GN
Sbjct: 301 DTAMEIFELCSDKT----LFTWNAMITGLAMHGN 330
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI +Y + GCVE + +VF ++++ SW S+I G A NG +++L F M+ G
Sbjct: 243 VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG 302
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD VTF L+ACSH GLVEEG + F M Y + P +EHYG +DL RAG L +A
Sbjct: 303 FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA 362
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYG-NIDMGERLATTLTNVKXXXXXXXXXXXXI 184
+LV+ +P + +E+++ +LL+AC +G NI + ERL LT++ +
Sbjct: 363 LKLVQSMPMKPNEVVIG---SLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNM 419
Query: 185 YASADRWE 192
YA+ +WE
Sbjct: 420 YAADGKWE 427
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++V +I Y +SG V+ + ++F+ + E+D SWT++I G G +AL F M+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD V IA L+AC++ G + G + H + K N+ IDL R G +
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWV-HRYVLSQDFKNNVRVSNSLIDLYCRCGCV 257
Query: 123 HEAEELVRKLPDQT 136
A ++ + +T
Sbjct: 258 EFARQVFYNMEKRT 271
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 117/190 (61%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V TALI M+A+ G ++ ++ +F ++ KDT +W+++I A +GK K++ +FE M +
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+PD++TF+ +L+ACSH G VEEGRK F M S + + P+++HYG +DLL RAG L +A
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E + KLP + L+R LL+AC ++ N+D+ E+++ + + +Y
Sbjct: 387 YEFIDKLPISPTPM---LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 443
Query: 186 ASADRWEDVN 195
A +WE V+
Sbjct: 444 ARNKKWEYVD 453
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V LI MY + V+ + VF+ + E + ++I G A + N+AL LF M+
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KP+++T ++VLS+C+ G ++ G K H + + ++ ID+ + G L
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSL 281
Query: 123 HEAEELVRKL 132
+A + K+
Sbjct: 282 DDAVSIFEKM 291
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 3/192 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD V ALI MY + G +E ++EVF G+K +D SW ++I GLA +G +AL LF M
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ G PD VTF+ VL AC H GLVE+G F+SM + + + P +EH G +DLL RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L +A E + K+P + D +I + LL A + Y +D+GE L ++
Sbjct: 342 LTQAVEFINKMPVKADAVI---WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVML 398
Query: 182 XXIYASADRWED 193
IY A R++D
Sbjct: 399 SNIYGDAGRFDD 410
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +++ YA G +E VF+ + E++ SW +I G A NG+ ++ L F+ M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 63 TLGA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G+ P+D T VLSAC+ G + G+ + + + K ++ ID+ G+ G
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 122 LHEAEELVRKL 132
+ A E+ + +
Sbjct: 240 IEIAMEVFKGI 250
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 150 bits (379), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 119/188 (63%), Gaps = 3/188 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG ALI MY++ G + ++ VF +++KD S+ ++I GLAM+G + +A+ F M G
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+ VT +A+L+ACSH GL++ G ++F+SM ++++P +EHYG +DLLGR G L EA
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+ +P + D I++ LLSAC+ +GN+++GE++A L + +Y
Sbjct: 412 YRFIENIPIEPDHIMLG---TLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLY 468
Query: 186 ASADRWED 193
AS+ +W++
Sbjct: 469 ASSGKWKE 476
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T +I Y++ G ++++LE+F +K KDT WT++I GL N + NKALELF M+
Sbjct: 188 DHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 247
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDLLGRAG 120
++ T + VLSACS G +E GR + HS M+ L ++ G I++ R G
Sbjct: 248 MENVSANEFTAVCVLSACSDLGALELGRWV-HSFVENQRME--LSNFVGNALINMYSRCG 304
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
++EA + R + D+ V Y ++S +G
Sbjct: 305 DINEARRVFRVMRDKD----VISYNTMISGLAMHG 335
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D +G+AL+ MY++ G +E++L VF L +K+ W SII GLA +G +AL++F
Sbjct: 1064 VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 1123
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
ME KP+ VTF++V +AC+HAGLV+EGR+++ SM Y + N+EHYGG + L +AG
Sbjct: 1124 MEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG 1183
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L++EA EL+ + + + +I + ALL CR + N+ + E L ++
Sbjct: 1184 LIYEALELIGNMEFEPNAVI---WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFL 1240
Query: 181 XXXIYASADRWEDV 194
+YA +RW DV
Sbjct: 1241 LVSMYAEQNRWRDV 1254
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
LI Y G +E++ +FN + KD SWT++I G + N + +A+ +F M G PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 70 DVTFIAVLSACSHAGLVEEGRKL-FHSMSSTYHM-------------------------- 102
+VT V+SAC+H G++E G+++ +++ + + +
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 103 ---KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDM 159
K NL + I+ L G EA ++ K+ ++ + + ++ +AC G +D
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 160 GERLATTLTN 169
G R+ ++ +
Sbjct: 1152 GRRIYRSMID 1161
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +VGTAL+ MYA+ G ++ S+ VF +++++ +W ++ GLAM+GK +++F M
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM- 343
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KPDD+TF AVLSACSH+G+V+EG + FHS+ Y ++P ++HY +DLLGRAGL+
Sbjct: 344 IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLI 402
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV 170
EAE L+R++P +E+++ +LL +C +G +++ ER+ L +
Sbjct: 403 EEAEILMREMPVPPNEVVLG---SLLGSCSVHGKVEIAERIKRELIQM 447
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFN--GLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
+ AL + YA SG + + ++F+ L EKD WT+++ + G +++LF M
Sbjct: 45 LSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR 104
Query: 64 LGAKPDDVTFIAVLSACSH---AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ DDV+ + + C+ G ++G H ++ + +++ +D+ G+ G
Sbjct: 105 KRVEIDDVSVVCLFGVCAKLEDLGFAQQG----HGVAVKMGVLTSVKVCNALMDMYGKCG 160
Query: 121 LLHEAEELVRKLPDQT 136
L+ E + + +L +++
Sbjct: 161 LVSEVKRIFEELEEKS 176
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 116/193 (60%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ GT LI +Y + GC+E+++ VF L EK+ +WT++I G A +G A +LF M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ P++VTF+AVLSAC+H GLVEEGR+LF SM ++M+P +HY +DL GR GL
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGL 458
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA+ L+ ++P + ++ + AL +C + + ++G+ A+ + ++
Sbjct: 459 LEEAKALIERMPMEPTNVV---WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLL 515
Query: 182 XXIYASADRWEDV 194
+Y+ + W++V
Sbjct: 516 ANLYSESQNWDEV 528
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G++L+ MY + C + + +VF+ + ++ +WT++I G + +K + +FE M
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
P++ T +VLSAC+H G + GR++ H ++ N IDL + G L
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRV-HCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 123 HEAEELVRKLPDQ 135
EA + +L ++
Sbjct: 358 EEAILVFERLHEK 370
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 68/133 (51%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI Y+ SG + + +F+G ++KD +WT++I G NG ++A+ F M+
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +++T ++VL A V GR + T +K ++ +D+ G+
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 123 HEAEELVRKLPDQ 135
+A+++ ++P +
Sbjct: 257 DDAQKVFDEMPSR 269
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VVG+AL+ MY++ G ++ +L FN + +++ SW S+I G A +G+ +AL+LFE M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G PD VTF+ VLSACSHAGL+EEG K F SMS +Y + P +EH+ D+LGRAG
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSA-CRTYG-NIDMGERLATTLTNVKXXXXXXXX 179
L + E+ + K+P + + +I +R +L A CR G ++G++ A L ++
Sbjct: 773 LDKLEDFIEKMPMKPNVLI---WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 829
Query: 180 XXXXIYASADRWEDV 194
+YA+ RWED+
Sbjct: 830 LLGNMYAAGGRWEDL 844
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G L+ MYA+ G + + VF + +KD+ SW S+I GL NG +A+E +++M
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P T I+ LS+C+ + G+++ H S + N+ + L G L+E
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 126 EELVRKLP--DQT--DEIIVPLYRA 146
++ +P DQ + II L R+
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARS 494
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 2 VDAVVGTALIKMYAQS-GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
VDAVV LI MY + G V +L F ++ K++ SW SII + G A +F +
Sbjct: 137 VDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSS 196
Query: 61 METLGAKPDDVTFIA-VLSACSHAGLVEEGRKLFHSMSSTYH---MKPNLEHYGGFIDLL 116
M+ G++P + TF + V +ACS L E +L + T + +L G +
Sbjct: 197 MQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 117 GRAGLLHEAEELVRKL 132
++G L A ++ ++
Sbjct: 254 AKSGSLSYARKVFNQM 269
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAM 61
+A ALI Y + G ++ ++F+ + E+ D +W S+I G N KAL+L M
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM 610
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + D + VLSA + +E G ++ H+ S ++ ++ +D+ + G
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 122 LHEAEELVRKLP 133
L A +P
Sbjct: 670 LDYALRFFNTMP 681
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT-NKALELFEA 60
++ V AL+ +YA++G + + ++F+ + E D SW SII LA + ++ +A+ F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ G K + +TF +VLSA S E G+++ H ++ ++ I G+ G
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCG 566
Query: 121 LLHEAEELVRKLPDQTDEI 139
+ E++ ++ ++ D +
Sbjct: 567 EMDGCEKIFSRMAERRDNV 585
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 115/192 (59%), Gaps = 3/192 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++++V TALI MY + GC+E+ L VF +K + W S+I GLA NG +A++LF +
Sbjct: 291 LNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL 350
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E G +PD V+FI VL+AC+H+G V + F M Y ++P+++HY +++LG AGL
Sbjct: 351 ERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGL 410
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAE L++ +P + D +I + +LLSACR GN++M +R A L +
Sbjct: 411 LEEAEALIKNMPVEEDTVI---WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLL 467
Query: 182 XXIYASADRWED 193
YAS +E+
Sbjct: 468 SNAYASYGLFEE 479
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V ++I +A+ G ++++ +F+ + +++ SW S+I G NG+ AL++F M+
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KPD T +++L+AC++ G E+GR + H + N ID+ + G +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWI-HEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 123 HEAEELVRKLPDQ 135
E + P +
Sbjct: 310 EEGLNVFECAPKK 322
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA + +ALI MY + G +E++ VF EKD A WTS+I GLA +G +AL+LF M+
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ 461
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P++VT +AVL+ACSH+GLVEEG +F+ M + P EHYG +DLL RAG +
Sbjct: 462 EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRV 521
Query: 123 HEAEELV-RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
EA+++V +K+P + + ++ ++LSACR +I+ E T L ++
Sbjct: 522 EEAKDIVQKKMPMRPSQ---SMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLL 578
Query: 182 XXIYASADRW 191
IYA+ RW
Sbjct: 579 SNIYATVGRW 588
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 14 YAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL-ELFEAMETL-GAKPDDV 71
+ + G +E + VF+ + ++D SW S++ G + G + + ELF M + KPD V
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 72 TFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRK 131
T ++++S ++ G + GR + H + +K + ID+ + G++ A +V K
Sbjct: 370 TMVSLISGAANNGELSHGRWV-HGLVIRLQLKGDAFLSSALIDMYCKCGIIERA-FMVFK 427
Query: 132 LPDQTDEIIVPLYRALLSACRTYGN 156
+ D V L+ ++++ +GN
Sbjct: 428 TATEKD---VALWTSMITGLAFHGN 449
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V ++ + MYA+ G + +S +F+ ++EK+ W +II G A + + + + LFE M+
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P++VTF ++LS C H GLVEEGR+ F M +TY + PN+ HY +D+LGRAGLL
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 123 HEAEELVRKLP-DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
EA EL++ +P D T I + +LL++CR Y N+++ E A L ++
Sbjct: 417 SEAYELIKSIPFDPTASI----WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLL 472
Query: 182 XXIYASADRWEDV 194
IYA+ +WE++
Sbjct: 473 SNIYAANKQWEEI 485
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VGTAL+ +YA+ G ++ +++VF +++K + +W+S++ G N +AL L+ + +
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+ + T +V+ ACS+ + EG+++ H++ N+ +D+ + G L E+
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 126 EELVRKLPDQTDEI 139
+ ++ ++ E+
Sbjct: 318 YIIFSEVQEKNLEL 331
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + LI Y++ G VE + +VF+G+ E+ SW ++I N ++AL++F M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G K + T +VLSAC E +KL H +S + NL +DL + G++
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 123 HEAEELVRKLPDQT 136
+A ++ + D++
Sbjct: 214 KDAVQVFESMQDKS 227
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD +GTAL+ MY++ GC+ + VF +K K+ +WTS+ GLA+NG+ N+ L M
Sbjct: 255 VDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM 314
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KP+++TF ++LSA H GLVEEG +LF SM + + + P +EHYG +DLLG+AG
Sbjct: 315 AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGR 374
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
+ EA + + +P + D I L R+L +AC YG MGE + L ++
Sbjct: 375 IQEAYQFILAMPIKPDAI---LLRSLCNACSIYGETVMGEEIGKALLEIE 421
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM-----NGKTNKALELFE 59
++GT L+ YA++G + + +VF+ + E+ + +W ++I G N KA+ LF
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 60 AMETLGA--KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDL 115
G+ +P D T + VLSA S GL+E G L H P ++ + G +D+
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGYIEKLGFTPEVDVFIGTALVDM 266
Query: 116 LGRAGLLHEA 125
+ G L+ A
Sbjct: 267 YSKCGCLNNA 276
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D +GT L+ M+++ G E ++ +FN L +D ++WT+ I +AM G +A+ELF+ M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD V F+ L+ACSH GLV++G+++F+SM + + P HYG +DLLGRAGL
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA +L+ +P + +++I + +LL+ACR GN++M A + +
Sbjct: 623 LEEAVQLIEDMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 182 XXIYASADRWEDV 194
+YASA RW D+
Sbjct: 680 SNVYASAGRWNDM 692
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D V +L+ YA+ G ++ + +VF+ + E++ SWTS+ICG A A++LF M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 93
P+ VT + V+SAC+ +E G K++
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V +++ Y ++G V+ + E F + EK+ SW +II GL +A+E+F +M++
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 65 -GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G D VT +++ SAC H G ++ + +++ + ++ ++ +D+ R G
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPE 522
Query: 124 EAEELVRKLPDQ 135
A + L ++
Sbjct: 523 SAMSIFNSLTNR 534
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ ALI MY + + + +F+ + K +W SI+ G NG+ + A E FE M
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM---- 429
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 98
+ + V++ ++S L EE ++F SM S
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ ALI MYA+ G +EKS E+F+ +KD W +I G M+G A+ LF+ ME
Sbjct: 570 LSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESD 629
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP TF+A+LSAC+HAGLVE+G+KLF M Y +KPNL+HY +DLL R+G L EA
Sbjct: 630 VKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEA 688
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E V +P D +I + LLS+C T+G +MG R+A +Y
Sbjct: 689 ESTVMSMPFSPDGVI---WGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMY 745
Query: 186 ASADRWED 193
++A +WE+
Sbjct: 746 SAAGKWEE 753
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 37/191 (19%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDT--ASWTSIICGLAMNGKTNKALELFEAMET 63
V +LI +Y + G + + +F E DT +W ++I ++ KA+ LF+ M +
Sbjct: 470 VVNSLIDLYGKMGDLTVAWRMFC---EADTNVITWNAMIASYVHCEQSEKAIALFDRMVS 526
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
KP +T + +L AC + G +E G+ + ++ T H + NL ID+ + G L
Sbjct: 527 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLE 585
Query: 124 EAEELVR---------------------------KLPDQTDEIIV----PLYRALLSACR 152
++ EL L DQ +E V P + ALLSAC
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACT 645
Query: 153 TYGNIDMGERL 163
G ++ G++L
Sbjct: 646 HAGLVEQGKKL 656
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VG + + Y++ G ++ + VF+ + ++D +WT+II G NG++ L M
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMH 219
Query: 63 TLGA---KPDDVTFIAVLSACSHAGLVEEGRKL 92
+ G+ KP+ T ACS+ G ++EGR L
Sbjct: 220 SAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +++ Y++SG ++ F L ++D SWTSII LA +G ++ ++F M+ G
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
PD V +++ LV +G K FH + + + + + LL A
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVA 385
Query: 126 EELVRKLPDQTDE 138
E+L ++ ++ ++
Sbjct: 386 EKLFCRISEEGNK 398
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V + LI YA G S VF+ + +D W SII NG ++L F +M
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 63 TLGAKPDDVTFIAVLSACS-----HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
G PD T V+SAC+ H G G L H N F+
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-----GFDRNTAVGASFVYFYS 172
Query: 118 RAGLLHEAEELVRKLPDQ 135
+ G L +A + ++PD+
Sbjct: 173 KCGFLQDACLVFDEMPDR 190
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEA 60
+D+ V +L+ MY + + + ++F + E+ + +W +++ G K +ELF
Sbjct: 364 LDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK 423
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
++ LG + D + +V+S+CSH G V G+ L H + + IDL G+ G
Sbjct: 424 IQNLGIEIDSASATSVISSCSHIGAVLLGKSL-HCYVVKTSLDLTISVVNSLIDLYGKMG 482
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ ++ ALI MY++ G + ++ ++F+ EK +WT++I G A+NG +AL+LF M
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
L KP+ +TF+AVL AC+H+G +E+G + FH M Y++ P L+HY +DLLGR G L
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA EL+R + + D ++ ALL+AC+ + N+ + E+ A +L N++
Sbjct: 512 EEALELIRNMSAKPD---AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 183 XIYASADRWE 192
IYA+A W+
Sbjct: 569 NIYAAAGMWD 578
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
I MY++S + +F+ + + SWT +I G A G ++AL LF AM G KPD
Sbjct: 297 FISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPD 356
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMK-PNLEHYGGFIDLLGRAGLLHEAEEL 128
VT ++++S C G +E G K + + Y K N+ ID+ + G +HEA ++
Sbjct: 357 LVTLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
Query: 129 VRKLPDQT 136
P++T
Sbjct: 416 FDNTPEKT 423
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGTA + M+ + V+ + +VF + E+D +W +++ G +G T+KA LF M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSST---YHMKPNLEHYGGFIDLLGRA 119
PD VT + ++ + S E+ KL +M + + + +I G+
Sbjct: 146 LNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC 201
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
G L A +LV + D+ D +V + ++ A +G
Sbjct: 202 GDLDSA-KLVFEAIDRGDRTVVS-WNSMFKAYSVFG 235
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 5/188 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V TA++ MY++ G +EK+ +F+ + EK ASW ++I G A+NG AL+LF M +
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIE 369
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD++T +AV++AC+H GLVEEGRK FH M + +EHYG +DLLGRAG L EA
Sbjct: 370 EKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEA 428
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E+L+ +P + + II+ + LSAC Y +I+ ER+ ++ +Y
Sbjct: 429 EDLITNMPFEPNGIILS---SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLY 485
Query: 186 ASADRWED 193
A+ RW+D
Sbjct: 486 AADKRWDD 493
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-T 63
+ T +I Y ++ + ++F+ + E++ SW ++I G N + + + LF+ M+ T
Sbjct: 208 ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
PDDVT ++VL A S G + G + H + ++ +D+ + G +
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIE 326
Query: 124 EAEELVRKLPDQ 135
+A+ + ++P++
Sbjct: 327 KAKRIFDEMPEK 338
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D +GT L+ M+++ G E ++ +FN L +D ++WT+ I +AM G +A+ELF+ M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD V F+ L+ACSH GLV++G+++F+SM + + P HYG +DLLGRAGL
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA +L+ +P + +++I + +LL+ACR GN++M A + +
Sbjct: 623 LEEAVQLIEDMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 182 XXIYASADRWEDV 194
+YASA RW D+
Sbjct: 680 SNVYASAGRWNDM 692
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D V +L+ YA+ G ++ + +VF+ + E++ SWTS+ICG A A++LF M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 93
P+ VT + V+SAC+ +E G K++
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V +++ Y ++G V+ + E F + EK+ SW +II GL +A+E+F +M++
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 65 -GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G D VT +++ SAC H G ++ + +++ + ++ ++ +D+ R G
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPE 522
Query: 124 EAEELVRKLPDQ 135
A + L ++
Sbjct: 523 SAMSIFNSLTNR 534
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ ALI MY + + + +F+ + K +W SI+ G NG+ + A E FE M
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM---- 429
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 98
+ + V++ ++S L EE ++F SM S
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D + +L+ MY +SG EK+ ++F+ KD ++TS+I G A+NG+ ++LELF+ M
Sbjct: 202 MDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM 261
Query: 62 ETLGAK------PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDL 115
+T+ P+DVTFI VL ACSH+GLVEEG++ F SM Y++KP H+G +DL
Sbjct: 262 KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDL 321
Query: 116 LGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXX 175
R+G L +A E + ++P + + +I +R LL AC +GN+++GE + + +
Sbjct: 322 FCRSGHLKDAHEFINQMPIKPNTVI---WRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Query: 176 XXXXXXXXIYASADRWED 193
IYAS W++
Sbjct: 379 GDYVALSNIYASKGMWDE 396
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETL 64
+ T+L+ Y+ G V+ + +VF+ EK + WT++I N + +A+ELF+ ME
Sbjct: 102 IQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAE 161
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+ D V LSAC+ G V+ G +++ S+ + +L +++ ++G
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSG--- 218
Query: 124 EAEELVRKLPDQTDEIIVPLYRALL 148
E RKL D++ V Y +++
Sbjct: 219 -ETEKARKLFDESMRKDVTTYTSMI 242
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 117/192 (60%), Gaps = 2/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ ++G ALI MY+Q G ++ SLEVFN + EKD SW S+I + +G+ A+ ++ M+
Sbjct: 523 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 582
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G PD TF AVLSACSHAGLVEEG ++F+SM + + N++H+ +DLLGRAG
Sbjct: 583 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 642
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EAE LV K+ ++T V ++ AL SAC +G++ +G+ +A L +
Sbjct: 643 LDEAESLV-KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQL 701
Query: 182 XXIYASADRWED 193
IYA A W++
Sbjct: 702 SNIYAGAGMWKE 713
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKTNKALELFEAM 61
D T L+ + G +E + EVF+ + E+D A W ++I G +G ++ELF M
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 62 ETLGAKPDDVTFIAVLSACSHAGL 85
LG + D F +LS C + L
Sbjct: 182 HKLGVRHDKFGFATILSMCDYGSL 205
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 121/192 (63%), Gaps = 3/192 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-L 64
+GTALI +Y++ G V K+ EVF+ +KE + A+WT++I +G +A+ELF ME
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC 304
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G P++VTF+AVLSAC+HAGLVEEGR ++ M+ +Y + P +EH+ +D+LGRAG L E
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 125 AEELVRKLPDQTDEIIVP-LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXX 183
A + + +L D T + P L+ A+L AC+ + N D+G +A L ++
Sbjct: 365 AYKFIHQL-DATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 423
Query: 184 IYASADRWEDVN 195
IYA + + ++V+
Sbjct: 424 IYALSGKTDEVS 435
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V AL+ Y++ G +E + +VF+ + EK +W S++ G NG ++A+++F M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G +PD TF+++LSAC+ G V G H + + N++ I+L R G
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLG-SWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+ +A E+ D+ E V + A++SA T+G
Sbjct: 259 VGKAREVF----DKMKETNVAAWTAMISAYGTHG 288
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
ALI MYA+ GC+EK+ +VF +K +D SWT++I +G+ A+ LF ++ G
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
PD + F+ L+ACSHAGL+EEGR F M+ Y + P LEH +DLLGRAG + EA
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYAS 187
++ + + +E + + ALL ACR + + D+G A L + IYA
Sbjct: 468 FIQDMSMEPNERV---WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 188 ADRWEDV 194
A RWE+V
Sbjct: 525 AGRWEEV 531
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++ +G L++ YA V + +VF+ + E++ +I NG + +++F M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+PD TF VL ACS +G + GRK+ H ++ + L G + + G+ G L
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKI-HGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 123 HEAE 126
EA
Sbjct: 192 SEAR 195
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 25 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 84
++F + +K SW +I N +A+EL+ ME G +PD V+ +VL AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 85 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 135
+ G+K+ H + PNL ID+ + G L +A ++ + +
Sbjct: 324 ALSLGKKI-HGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG L+ MY + G + ++ V + + +D SW S++ G A N + + ALE+ ME++
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 66 AKPDDVTFIAVLSACSHAGL--VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
D T ++L A S+ V + +F M K +L + I + + +
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG-----KKSLVSWNVMIGVYMKNAMPV 291
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
EA EL ++ E ++L AC + +G+++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 2/190 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG+AL+ MYA+ GC++ S +VF+ + +K+ +W II M+G +A++L M
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KP++VTFI+V +ACSH+G+V+EG ++F+ M Y ++P+ +HY +DLLGRAG +
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA +L+ +P ++ + +LL A R + N+++GE A L ++
Sbjct: 671 KEAYQLMNMMPRDFNK--AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 183 XIYASADRWE 192
IY+SA W+
Sbjct: 729 NIYSSAGLWD 738
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V L+ MY++ G ++ ++ +F ++++D +W ++I G + AL L M+
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 63 TL------GA-----KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG 111
L GA KP+ +T + +L +C+ + +G+++ H+ + ++ ++
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLATDVAVGSA 557
Query: 112 FIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
+D+ + G L ++ RK+ DQ + V + ++ A +GN
Sbjct: 558 LVDMYAKCGCL----QMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+++ + L+ MY + G + S + +D +W +++ L N + +ALE M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G +PD+ T +VL ACSH ++ G++L
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 2 VDAV-VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
VD+V V L+ +Y + G +VF+ + E++ SW S+I L K ALE F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVE 87
M +P T ++V++ACS+ + E
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPE 216
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
++ VG+AL+ MY V VF+G+ ++ W ++I G + N +AL LF M
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E+ G + T V+ AC +G ++ H + + +D+ R G
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 122 LHEAEELVRKLPDQ 135
+ A + K+ D+
Sbjct: 456 IDIAMRIFGKMEDR 469
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +ALI MY++ G +EKS EVFN ++++D W+++I GLAM+G N+A+++F M+
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP+ VTF V ACSH GLV+E LFH M S Y + P +HY +D+LGR+G L +A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+ + +P ++ ALL AC+ + N+++ E T L ++ IY
Sbjct: 522 VKFIEAMPIPPS---TSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIY 578
Query: 186 ASADRWEDVN 195
A +WE+V+
Sbjct: 579 AKLGKWENVS 588
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI Y G ++ + +VF +KEKD SW S+I G G +KALELF+ ME
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ K VT + VLSAC+ +E GR++ + + NL +D+ + G +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTLANAMLDMYTKCGSI 283
Query: 123 HEAEELVRKLPDQTD 137
+A+ L + ++ +
Sbjct: 284 EDAKRLFDAMEEKDN 298
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T ++ YA S E + EV N + +KD +W ++I NGK N+AL +F ++
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 63 -TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
K + +T ++ LSAC+ G +E GR + HS + ++ N I + + G
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 122 LHEAEEL 128
L ++ E+
Sbjct: 416 LEKSREV 422
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
+ +G +L+++Y++ G + + +VFNG+ KDT WTS+I G ++GK KALE F M
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
++ KP++VTF+++LSACSHAGL+ EG ++F M + Y + PNLEHY +DLLGR G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 122 LHEAEELVRKLP-DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L A E+ +++P T +I+ LL ACR + N +M E +A L ++
Sbjct: 520 LDTAIEITKRMPFSPTPQIL----GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYML 575
Query: 181 XXXIYASADRWEDV 194
+Y WE+V
Sbjct: 576 MSNVYGVKGEWENV 589
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL- 64
V TAL+ MY + E++ VF+ + KD SW ++I G +NG ++++E F M
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
+PD + + VL +CS G +E+ K FHS Y N ++L R G L
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 125 AEEL 128
A ++
Sbjct: 420 ASKV 423
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +L+ YA+S ++++ +F + EKD SW+++I NG +AL +F M
Sbjct: 197 DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM 256
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P+ T + VL AC+ A +E+GRK H ++ ++ ++ +D+ +
Sbjct: 257 DDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMYMKCFSP 315
Query: 123 HEAEELVRKLPDQ 135
EA + ++P +
Sbjct: 316 EEAYAVFSRIPRK 328
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG++LI MY + G + ++L +F+ L++ D +W+S++ G NG +A+E F M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGR 90
PD VT I ++SAC+ GR
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGR 183
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G ALI+MY++ GC+E S VF + +D +WT +I M G+ KALE F ME G
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
PD V FIA++ ACSH+GLV+EG F M + Y + P +EHY +DLL R+ + +A
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
EE ++ +P + D I + ++L ACRT G+++ ER++ + + Y
Sbjct: 666 EEFIQAMPIKPDASI---WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 186 ASADRWEDVN 195
A+ +W+ V+
Sbjct: 723 AALRKWDKVS 732
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++++ V LI +YA+ G + + +VFN ++ KDT SW SII G +G +A++LF+
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M + + D +T++ ++S + ++ G+ L HS + +L ID+ + G
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGL-HSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
+ ++ ++ + T + + + ++SAC +G+ G ++ T +
Sbjct: 458 EVGDSLKIFSSM--GTGDTVT--WNTVISACVRFGDFATGLQVTTQM 500
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG AL+ MY++ G + ++ +VF+ + +D SW S+I G + +G +ALE++ ++
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
PD T +VL A + +V++G+ L
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V ALI MYA+ G V SL++F+ + DT +W ++I G L++ M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
PD TF+ L C+ G+++ H + + L+ I++ + G
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEI-HCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 122 LHEAEELVRKL 132
L + + ++
Sbjct: 560 LENSSRVFERM 570
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +AL+ MY + G +E VF+ + ++D SW S+I ++G KA+++FE M G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
A P VTF++VL ACSH GLVEEG++LF +M + +KP +EHY +DLLGRA L EA
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
++V+ D E ++ +LL +CR +GN+++ ER + L ++ IY
Sbjct: 442 AKMVQ---DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIY 498
Query: 186 ASADRWEDVN 195
A A W++V
Sbjct: 499 AEAQMWDEVK 508
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ET 63
+ T L+ MYA+ GCV+ + VF G+ ++ SW+++I A NGK +AL F M ET
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+ P+ VT ++VL AC+ +E+G KL H + L + + GR G L
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 124 EAEELVRKLPDQ 135
+ + ++ D+
Sbjct: 338 VGQRVFDRMHDR 349
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI+MY++ G + +++++F ++ KD SW+++I G A +G + A+E F M+
Sbjct: 278 VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK 337
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP+ +TF+ +LSACSH G+ +EG + F M Y ++P +EHYG ID+L RAG L A
Sbjct: 338 VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E+ + +P + D I + +LLS+CRT GN+D+ L ++ IY
Sbjct: 398 VEITKTMPMKPDSKI---WGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIY 454
Query: 186 ASADRWEDVN 195
A +WEDV+
Sbjct: 455 ADLGKWEDVS 464
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +L+ YA+ G ++K+ +F+ + +K SWT++I G G +A++ F M+
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD+++ I+VL +C+ G +E G K H + I++ + G++
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 123 HEAEELVRKL 132
+A +L ++
Sbjct: 293 SQAIQLFGQM 302
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+ALI MY++ GC++ + EVF + D +WT+ I G A G ++AL LFE M + G K
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
P+ VTFIAVL+ACSHAGLVE+G+ +M Y++ P ++HY ID+ R+GLL EA +
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALK 545
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYAS 187
++ +P + D + ++ LS C T+ N+++GE L + +Y
Sbjct: 546 FMKNMPFEPDAMS---WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTW 602
Query: 188 ADRWED 193
A +WE+
Sbjct: 603 AGKWEE 608
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VGT L+ Y + E + F ++E + SW++II G + +A++ F+++ +
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 66 AKP-DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
A + T+ ++ ACS G ++ H+ + + + I + + G L +
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQV-HADAIKRSLIGSQYGESALITMYSKCGCLDD 440
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
A E+ + D D + + A +S YGN RL
Sbjct: 441 ANEVFESM-DNPD---IVAWTAFISGHAYYGNASEALRL 475
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ +L+ MYA+ G +E + E+F + +KDT SW S+I GL+ +G +KAL LF+ M
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KP+ VTF+ VLSACSH+GL+ G +LF +M TY ++P ++HY IDLLGRAG L
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKL 621
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSAC 151
EAEE + LP D + Y ALL C
Sbjct: 622 KEAEEFISALPFTPDHTV---YGALLGLC 647
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T++I Y ++G V ++ +F L +KD +WT +I GL N +A L M
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMS-STYHMKPNLEHYGGFIDLLGRAGL 121
G KP + T+ +LS+ +++G+ + ++ +T P+L + + + G
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 122 LHEAEELVRKL 132
+ +A E+ K+
Sbjct: 519 IEDAYEIFAKM 529
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V T ++ G E ++E+F+ + E++ SW +++ GL NG KA ++F+AM
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ D V++ A++ +EE + LF MS + N+ + + R G +
Sbjct: 197 S----RDVVSWNAMIKGYIENDGMEEAKLLFGDMS-----EKNVVTWTSMVYGYCRYGDV 247
Query: 123 HEAEELVRKLPDQT 136
EA L ++P++
Sbjct: 248 REAYRLFCEMPERN 261
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-TLGA 66
L+ +YA+ G VE++ +F+ + +K++ SWTS+I GLA+NG +A+ELF+ ME T G
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
P ++TF+ +L ACSH G+V+EG + F M Y ++P +EH+G +DLL RAG + +A
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 127 ELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYA 186
E ++ +P Q + +I +R LL AC +G+ D+ E + ++ +YA
Sbjct: 381 EYIKSMPMQPNVVI---WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 187 SADRWEDVN 195
S RW DV
Sbjct: 438 SEQRWSDVQ 446
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +L+ +YA G V + +VF+ + EKD +W S+I G A NGK +AL L+ M + G
Sbjct: 158 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD T +++LSAC+ G + G+++ H + NL +DL R G + EA
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRV-HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 126 EELVRKLPDQT 136
+ L ++ D+
Sbjct: 277 KTLFDEMVDKN 287
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL- 64
V T LI MY++ G +E+++ VFN KD +W ++I G AM+G + AL LF M+ +
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT 355
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G +P D+TFI L AC+HAGLV EG ++F SM Y +KP +EHYG + LLGRAG L
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A E ++ + D + L+ ++L +C+ +G+ +G+ +A L + I
Sbjct: 416 AYETIKNMNMDADSV---LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNI 472
Query: 185 YASADRWEDV 194
YAS +E V
Sbjct: 473 YASVGDYEGV 482
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V TA+I YA+ G VE + +F+ + E+D SW +I G A +G N AL LF+ +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 65 G-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G KPD++T +A LSACS G +E GR + H + ++ N++ G ID+ + G L
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWI-HVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 124 EAEELVRKLPDQ 135
EA + P +
Sbjct: 312 EAVLVFNDTPRK 323
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG+ALI MYA+ G + S VFN + K+ W S++ G +M+GK + + +FE++
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD ++F ++LSAC GL +EG K F MS Y +KP LEHY ++LLGRAG L EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+L++++P + D + + ALL++CR N+D+ E A L +++ IY
Sbjct: 545 YDLIKEMPFEPDSCV---WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 186 ASADRWEDVN 195
A+ W +V+
Sbjct: 602 AAKGMWTEVD 611
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALE 56
M++A V A I +++G V+K+LE+F KE+ + SWTSII G A NGK +ALE
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALE 374
Query: 57 LFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 116
LF M+ G KP+ VT ++L AC + + GR H + H+ N+ ID+
Sbjct: 375 LFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST-HGFAVRVHLLDNVHVGSALIDMY 433
Query: 117 GRAGLLHEAEELVRKLPDQT 136
+ G ++ ++ + +P +
Sbjct: 434 AKCGRINLSQIVFNMMPTKN 453
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 36/188 (19%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELF 58
D V +AL+ YA+ GC+E+ + + + ++ E + SW I+ G +G +A+ +F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS-------------MSSTYHMKPN 105
+ + LG PD VT +VL + + ++ GR L H +S+ M
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR-LIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 106 LEHYGGFIDL------------------LGRAGLLHEAEELVRKLPDQTDEIIVPLYRAL 147
H G I L L R GL+ +A E+ +QT E+ V + ++
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 148 LSACRTYG 155
++ C G
Sbjct: 360 IAGCAQNG 367
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-TLGA 66
L+ +YA+ G VE++ +F+ + +K++ SWTS+I GLA+NG +A+ELF+ ME T G
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
P ++TF+ +L ACSH G+V+EG + F M Y ++P +EH+G +DLL RAG + +A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 127 ELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYA 186
E ++ +P Q + +I +R LL AC +G+ D+ E + ++ +YA
Sbjct: 248 EYIKSMPMQPNVVI---WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 187 SADRWEDVN 195
S RW DV
Sbjct: 305 SEQRWSDVQ 313
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +L+ +YA G V + +VF+ + EKD +W S+I G A NGK +AL L+ M + G
Sbjct: 25 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 84
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD T +++LSAC+ G + G+++ H + NL +DL R G + EA
Sbjct: 85 IKPDGFTIVSLLSACAKIGALTLGKRV-HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 126 EELVRKLPDQT 136
+ L ++ D+
Sbjct: 144 KTLFDEMVDKN 154
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ +V A + M+ + G E + +F +K+++ SW+++I G AMNG + +AL LF M+
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM--SSTYHMKPNLEHYGGFIDLLGRAG 120
G +P+ VTF+ VLSACSHAGLV EG++ F M S+ +++P EHY +DLLGR+G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
LL EA E ++K+P + D ++ ALL AC + ++ +G+++A L
Sbjct: 364 LLEEAYEFIKKMPVEPD---TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420
Query: 181 XXXIYASADRWEDVN 195
IYA+A +W+ V+
Sbjct: 421 LSNIYAAAGKWDCVD 435
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
+V T L+ MY + G + + +F ++ KD +W + + G + ALE F M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLF 93
+ D T +++LSAC G +E G +++
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ +AL+ MY++ G +++ +FN + +KD SWT +I +G+ +AL F+ M+
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD VT +AVLSAC HAGL++EG K F M S Y ++P +EHY ID+LGRAG L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA E++++ P+ +D L L SAC + +G+R+A L
Sbjct: 564 LEAYEIIQQTPETSDN--AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLF 621
Query: 183 XIYASADRWE 192
+YAS + W+
Sbjct: 622 NLYASGESWD 631
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D VV ++L+ MYA+ E SL+VF+ + E+D ASW ++I +G+ KALELF
Sbjct: 139 VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGR 198
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
ME+ G +P+ V+ +SACS +E G+++ H + + +D+ G+
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEI-HRKCVKKGFELDEYVNSALVDMYGKCD 257
Query: 121 LLHEAEELVRKLPDQT 136
L A E+ +K+P ++
Sbjct: 258 CLEVAREVFQKMPRKS 273
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI +Y + G + VF+ ++ SW +I G KA+E+++ M
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
++G KPD VTF +VL ACS +E+G+++ S+S + ++ + +D+ + G
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNE 461
Query: 123 HEAEELVRKLPDQ 135
EA + +P +
Sbjct: 462 KEAFRIFNSIPKK 474
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V +AL+ MY + C+E + EVF + K +W S+I G G + +E+ M
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G +P T ++L ACS + + G K H + ++ IDL + G
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
+ AE + K T + + + ++S+ + GN
Sbjct: 360 ANLAETVFSK----TQKDVAESWNVMISSYISVGN 390
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V TAL+ MY + G ++ + +F+G+ E+D SWT II G NG+ +A F M
Sbjct: 477 EPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+G +P+ VTF+ +LSAC H+GL+EE R +M S Y ++P LEHY +DLLG+AGL
Sbjct: 537 NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLF 596
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA EL+ K+P + D+ I + +LL+AC T+ N + +A L
Sbjct: 597 QEANELINKMPLEPDKTI---WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653
Query: 183 XIYASADRWEDVN 195
YA+ W+ ++
Sbjct: 654 NAYATLGMWDQLS 666
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
+ + +I MY + + +VF+ + E++ +WT+++ G +GK NKA+EL+ M
Sbjct: 39 NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRML 98
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
++ ++ + AVL AC G ++ G ++ + +++ ++ +D+ + G
Sbjct: 99 DSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGR 157
Query: 122 LHEAEELVRKL--PDQT 136
L EA +++ P T
Sbjct: 158 LIEANSSFKEILRPSST 174
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-- 63
VG+AL+ MY + GC+E S + F+ + EK+ + S+I G A G+ + AL LFE M
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G P+ +TF+++LSACS AG VE G K+F SM STY ++P EHY +D+LGRAG++
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXX 183
A E ++K+P Q + ++ AL +ACR +G +G A L +
Sbjct: 467 RAYEFIKKMPIQP---TISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Query: 184 IYASADRWEDVN 195
+A+A RW + N
Sbjct: 524 TFAAAGRWAEAN 535
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D VG + MY ++ + + ++F+ + E++ +W + I +G+ +A+E F
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ P+ +TF A L+ACS + G +L H + ++ G ID G+
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQL-HGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 121 LLHEAE 126
+ +E
Sbjct: 259 QIRSSE 264
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V LI Y + + S +F + K+ SW S++ N + KA L+
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ D +VLSAC+ +E GR + H+ + ++ + +D+ G+ G +
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 123 HEAEELVRKLPDQT 136
++E+ ++P++
Sbjct: 362 EDSEQAFDEMPEKN 375
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D T+LI MY + G + + ++F +K+KD +W ++I G A +G +KAL LF M
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+PD +TF+AVL AC+HAGLV G F SM Y ++P +HY +DLLGRAG L
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA +L+R +P + + + LL ACR + N+++ E A L +
Sbjct: 438 EEALKLIRSMPFRPHAAV---FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 494
Query: 183 XIYASADRWEDV 194
IYAS +RWEDV
Sbjct: 495 NIYASKNRWEDV 506
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMET 63
V TA+I Y ++ VE + +F + K+ +W ++I G N + L+LF AM
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G +P+ + L CS ++ GR++ H + S + ++ I + + G L
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+A +L + + V + A++S +GN D
Sbjct: 337 DAWKLFEVMKKKD----VVAWNAMISGYAQHGNAD 367
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 118/193 (61%), Gaps = 5/193 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
V+ + AL+ MY + G ++ + VF+ + ++D SW +++ G ++G +AL LF +M
Sbjct: 442 VNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMS-STYHMKPNLEHYGGFIDLLGRAG 120
+ G PD+VT +A+LSACSH+GLV+EG++LF+SMS +++ P ++HY DLL RAG
Sbjct: 502 QETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAG 561
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L EA + V K+P + D + + LLSAC TY N ++G ++ + ++
Sbjct: 562 YLDEAYDFVNKMPFEPD---IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLL 618
Query: 181 XXXIYASADRWED 193
Y++A+RWED
Sbjct: 619 SNT-YSAAERWED 630
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D V +I YA+ G + + F+ + KD S+ S+I G +N + ++ LF
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M T G +PD T + VL+ACSH + G H + N +D+ + G
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSC-HGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 121 LLHEAEEL 128
L A+ +
Sbjct: 459 KLDVAKRV 466
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TAL+ YA+ G +E +++VF+ + ++D +W ++I G +++ + LF M
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 63 TL-GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
+ G P+ T + + A AG + EG+ + H + +L G +D+ ++
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAV-HGYCTRMGFSNDLVVKTGILDVYAKS 253
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEK--DTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
L ++YA VE + VF+ + + +W +I A N KAL+L+ M G +
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
P T+ VL AC+ +++G KL HS + ++ +D + G L A +
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 128 LVRKLPDQ 135
+ ++P +
Sbjct: 160 VFDEMPKR 167
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ +LI MY + G ++ + +F +++++ SW+S+I G A NG T +ALE F M
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P+ +TF+ VLSAC H GLVEEG+ F M S + ++P L HYG +DLL R G L
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQL 373
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA+++V ++P + + V ++ L+ C +G+++M E +A + ++
Sbjct: 374 KEAKKVVEEMPMKPN---VMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLA 430
Query: 183 XIYASADRWEDV 194
+YA W+DV
Sbjct: 431 NVYALRGMWKDV 442
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + I +Y ++G E + +VF+ E+ SW +II GL G+ N+A+E+F M+
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK 210
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS-MSSTYHMKPNLEHYGGFIDLLGRAGL 121
G +PDD T ++V ++C G + +L + + K ++ ID+ G+ G
Sbjct: 211 RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGR 270
Query: 122 LHEAEELVRKL 132
+ A + ++
Sbjct: 271 MDLASHIFEEM 281
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V T+L MY + G +E +L +F + ++ W ++I +G KA+ LF+ M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD +TF+ +LSACSH+GLV+EG+ F M + Y + P+L+HYG +D+ GRAG
Sbjct: 544 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 603
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L A + ++ + Q D ++ ALLSACR +GN+D+G+ + L V+
Sbjct: 604 LETALKFIKSMSLQPD---ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 660
Query: 182 XXIYASADRWEDVN 195
+YASA +WE V+
Sbjct: 661 SNMYASAGKWEGVD 674
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G A++ MYA+ G V+ + VFN L D SW +II G A NG ++A+E++ ME
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 63 TLGA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + T+++VL ACS AG + +G KL H + ++ D+ G+ G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKL-HGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 122 LHEAEELVRKLP 133
L +A L ++P
Sbjct: 502 LEDALSLFYQIP 513
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V LI +YA+ G + +VF+ + +D SW SII +N + +A+ LF+ M
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKL 92
+PD +T I++ S S G + R +
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSV 370
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
+ ++L+ MY + G +E + V +G + D SWTS+I G A NG+ ++AL+ F+ +
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G KPD VTF+ VLSAC+HAGLVE+G + F+S++ + + +HY +DLL R+G
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXX 183
+ + ++ ++P + + L+ ++L C TYGNID+ E A L ++
Sbjct: 474 QLKSVISEMPMKPSKF---LWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMAN 530
Query: 184 IYASADRWED 193
IYA+A +WE+
Sbjct: 531 IYAAAGKWEE 540
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V+ ++L+ MY + GC++++ +F+ + EKD SWTS+I + + + LF +
Sbjct: 252 DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV 311
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+P++ TF VL+AC+ E G+++ H + P +D+ + G +
Sbjct: 312 GSCERPNEYTFAGVLNACADLTTEELGKQV-HGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
A+ +V P + + +L+ C G D
Sbjct: 371 ESAKHVVDGCPKPD----LVSWTSLIGGCAQNGQPD 402
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ T L+ +YA+ G +EK++EVF G++EK+ +W+S + GLAMNG K LELF M+ G
Sbjct: 277 LATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG 336
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ VTF++VL CS G V+EG++ F SM + + ++P LEHYG +DL RAG L +A
Sbjct: 337 VTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDA 396
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+++++P + + + +LL A R Y N+++G + + ++ IY
Sbjct: 397 VSIIQQMPMKPHAAV---WSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIY 453
Query: 186 ASADRWEDVN 195
A ++ W++V+
Sbjct: 454 ADSNDWDNVS 463
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TA++ A+ G V + ++F G+ E+D +W ++I G A G++ +AL +F M+
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G K + V I+VLSAC+ G +++GR HS +K + +DL + G +
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGR-WAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 123 HEAEEL 128
+A E+
Sbjct: 292 EKAMEV 297
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD V + L+ MY + G + KS +F+ KD W SII G A +G +AL++F M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 62 ETLGA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
G+ KP++VTF+A LSACS+AG+VEEG K++ SM S + +KP HY +D+LGRAG
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
+EA E++ + + D + + +LL ACRT+ +D+ E A L ++
Sbjct: 484 RFNEAMEMIDSMTVEPDAAV---WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYIL 540
Query: 181 XXXIYASADRWEDV 194
+YAS RW DV
Sbjct: 541 LSNMYASQGRWADV 554
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+ T ++ Y Q+ V+ + ++F+ + EK SWTS++ G NG+ A ELFE M
Sbjct: 204 ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV- 262
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
KP + A++S G + + R++F SM N + I + R G E
Sbjct: 263 --KP-VIACNAMISGLGQKGEIAKARRVFDSMKER-----NDASWQTVIKIHERNGFELE 314
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
A +L + Q P ++LS C + ++ G+++ L +
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V TAL+K Y +G V+ + +F + EK+ SWT ++ G +G+ + A +L+E +
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI- 167
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
D++ +++ G V+E R++F MS ++ + + G+ +
Sbjct: 168 ---PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER-----SVITWTTMVTGYGQNNRV 219
Query: 123 HEAEELVRKLPDQTD 137
+A ++ +P++T+
Sbjct: 220 DDARKIFDVMPEKTE 234
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + T++I + G V+++ E+F+ + E+ +WT+++ G N + + A ++F+ M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM- 229
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ +V++ ++L G +E+ +LF M +KP + I LG+ G +
Sbjct: 230 ---PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEI 281
Query: 123 HEAEELVRKLPDQTD 137
+A + + ++ D
Sbjct: 282 AKARRVFDSMKERND 296
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA 66
G ALI MYA+ G VE++ +VF + D+ SW ++I L +G +A++++E M G
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
+PD +T + VL+ACSHAGLV++GRK F SM + Y + P +HY IDLL R+G +AE
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAE 574
Query: 127 ELVRKLP-DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
++ LP T EI + ALLS CR +GN+++G A L + ++
Sbjct: 575 SVIESLPFKPTAEI----WEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMH 630
Query: 186 ASADRWEDV 194
A+ +WE+V
Sbjct: 631 AATGQWEEV 639
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V AL+ Y SG + ++ +F +KEK+ SW +I GLA NG + L+LF M+
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P D F + +C+ G G++ +H+ +L I + + G++
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQ-YHAQLLKIGFDSSLSAGNALITMYAKCGVV 468
Query: 123 HEAEELVRKLP 133
EA ++ R +P
Sbjct: 469 EEARQVFRTMP 479
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
V V LI MYA+ G + + VF+ + K+ +WTS++ G M+G +AL +F+ M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+G K D VT + VL ACSH+G++++G + F+ M + + + P EHY +DLLGRAG
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L+ A L+ ++P + ++ + A LS CR +G +++GE A +T +
Sbjct: 631 LNAALRLIEEMPMEPPPVV---WVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 182 XXIYASADRWEDV 194
+YA+A RW+DV
Sbjct: 688 SNLYANAGRWKDV 700
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VG AL+ MY++ + + +VF+ + D SW SII A GK ALE+F M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 63 T-LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G +PD++T + VL C+ G G++L H + T M N+ +D+ + G+
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 122 LHEAEELVRKL 132
+ EA + +
Sbjct: 280 MDEANTVFSNM 290
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VG L+ MYA+ G ++++ VF+ + KD SW +++ G + G+ A+ LFE M+
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN 105
K D VT+ A +S + GL E + M S+ +KPN
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPN 364
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V A++ Y+Q G E ++ +F ++E+ D +W++ I G A G +AL +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
M + G KP++VT I+VLS C+ G + G+++
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
+V LI MYA+ V+ + +F+ L KE+D +WT +I G + +G NKALEL M
Sbjct: 408 MVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 62 -ETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
E +P+ T L AC+ + G+++
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 7/162 (4%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTA--SWTSIICGLAMNGKTNKALELFEAMETLGAK 67
LI Y GC+ ++ + D W S+I NG NK L LF M +L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
PD+ TF V AC V G H++S N+ + + R L +A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESA-HALSLVTGFISNVFVGNALVAMYSRCRSLSDA-- 181
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 169
RK+ D+ V + +++ + G + + + +TN
Sbjct: 182 --RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ + LI MYA+ G + ++ +F+ + +D SW+++I G A +G +AL LF+ M+
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G +P+ VTF+ VL+ACSH GLVEEG KL+ +M + + + P EH +DLL RAG L
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRL 626
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+EAE + ++ + D V +++ LLSAC+T GN+ + ++ A + +
Sbjct: 627 NEAERFIDEMKLEPD---VVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLC 683
Query: 183 XIYASADRWED 193
++AS+ WE+
Sbjct: 684 SMHASSGNWEN 694
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+A+ G +L MYA+ G + + VF+ ++ DTASW II GLA NG ++A+ +F M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
+ G PD ++ ++L A + + +G ++
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ ++ MY + G + + EVF+ + E++ S+TS+I G + NG+ +A+ L+ M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
PD F +++ AC+ + V G++L H+ +L I + R +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQL-HAQVIKLESSSHLIAQNALIAMYVRFNQM 219
Query: 123 HEAEELVRKLP 133
+A + +P
Sbjct: 220 SDASRVFYGIP 230
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+ ALI MY + + + VF G+ KD SW+SII G + G +AL + M +
Sbjct: 204 IAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSF 263
Query: 65 GA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G P++ F + L ACS + G ++ H + + N D+ R G L+
Sbjct: 264 GVFHPNEYIFGSSLKACSSLLRPDYGSQI-HGLCIKSELAGNAIAGCSLCDMYARCGFLN 322
Query: 124 EAEELVRKLPDQTDE 138
A R++ DQ +
Sbjct: 323 SA----RRVFDQIER 333
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 3/191 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V LI MY++ G + S VF + +++ SW S+I A +G AL+L+E M
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
TL KP DVTF+++L ACSH GL+++GR+L + M + ++P EHY ID+LGRAGLL
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA+ + LP + D +++ALL AC +G+ ++GE A L
Sbjct: 511 KEAKSFIDSLPLKPD---CKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 183 XIYASADRWED 193
IY+S +W++
Sbjct: 568 NIYSSRGKWKE 578
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG LI Y + GC VF+G+ ++ + T++I GL N L LF M
Sbjct: 192 VGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL 251
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ VT+++ L+ACS + + EG+++ H++ Y ++ L +D+ + G + +A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDA 310
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ +AL+ MY++ G +E + +F E D S T I+ GLA NG +A++ F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+ D AVL + G++L HS+ N G I++ + G L ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQL-HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 126 EELVRKLPDQ 135
+ + R++P +
Sbjct: 412 QTVFRRMPKR 421
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+DAV T+ I MYA+ G ++ + VF+ + E++ SW+S+I +NG +AL+ F M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
++ P+ VTF+++LSACSH+G V+EG K F SM+ Y + P EHY +DLLGRAG
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGE 464
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
+ EA+ + +P + + + ALLSACR + +D+ +A L +++
Sbjct: 465 IGEAKSFIDNMPVKP---MASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLL 521
Query: 182 XXIYASADRWEDVN 195
IYA A WE VN
Sbjct: 522 SNIYADAGMWEMVN 535
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 36/193 (18%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKP 68
++I MY + ++ + ++F +++ WT++I G A + +A +LF M P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 69 DDVTFIAVLSACSHAGLVEEGRKLFHSM----------------------------SSTY 100
+ T A+L +CS G + G+ + M + +
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 101 HMKP--NLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP---LYRALLSACRTYG 155
M P N+ + I+ G GL EA + K+ Q +VP + +LLSAC G
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN---VVPNSVTFVSLLSACSHSG 427
Query: 156 NIDMGERLATTLT 168
N+ G + ++T
Sbjct: 428 NVKEGWKQFESMT 440
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 139 bits (351), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V TAL+ MYA+ G + + +F+ + E+ +W ++I G +G ALELFE M+
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KP+ VTF++V+SACSH+GLVE G K F+ M Y ++ +++HYG +DLLGRAG L
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+EA + + ++P + V +Y A+L AC+ + N++ E+ A L +
Sbjct: 592 NEAWDFIMQMPVKP---AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 648
Query: 183 XIYASADRWEDV 194
IY +A WE V
Sbjct: 649 NIYRAASMWEKV 660
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ TAL+ MYA+ G +E + ++F+G+ E++ SW S+I N +A+ +F+ M G
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP DV+ + L AC+ G +E GR H +S + N+ I + + + A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 126 EELVRKLPDQT 136
+ KL +T
Sbjct: 392 ASMFGKLQSRT 402
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D T L MYA+ V ++ +VF+ + E+D SW +I+ G + NG ALE+ ++M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAG 120
KP +T ++VL A S L+ G+++ ++M S + N+ +D+ + G
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCG 285
Query: 121 LLHEAEEL 128
L A +L
Sbjct: 286 SLETARQL 293
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI MY + V+ + +F L+ + SW ++I G A NG+ AL F M +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD T+++V++A + + K H + + N+ +D+ + G A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCG----A 488
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+ R + D E V + A++ T+G
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%), Gaps = 7/196 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EA 60
++ +GTAL+ MYA+SG +E + VF + +K+ +W+++I GLA G +AL+LF +
Sbjct: 245 LNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM 304
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M+ +P+ VTF+ VL ACSH GLV++G K FH M + +KP + HYG +D+LGRAG
Sbjct: 305 MKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAG 364
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID---MGERLATTLTNVKXXXXXX 177
L+EA + ++K+P + D ++ +R LLSAC + + D +GE++ L ++
Sbjct: 365 RLNEAYDFIKKMPFEPDAVV---WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGN 421
Query: 178 XXXXXXIYASADRWED 193
+A A W +
Sbjct: 422 LVIVANRFAEARMWAE 437
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG LI +Y + +VF+ + E++ SW SI+ L NGK N E F E
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF--CE 204
Query: 63 TLGAK--PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+G + PD+ T + +LSAC G + G KL HS ++ N +D+ ++G
Sbjct: 205 MIGKRFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNCRLGTALVDMYAKSG 261
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
L A + ++ D+ V + A++ YG
Sbjct: 262 GLEYARLVFERMVDKN----VWTWSAMIVGLAQYG 292
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 3/191 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+ V TAL MY + G ++ + + F+ + K+T W +I G NG+ ++A+ L+ M
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G KPD +TF++VL+ACSH+GLVE G ++ SM + ++P L+HY +D LGRAG L
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+AE+L P ++ + L+ LLS+CR +G++ + R+A L +
Sbjct: 673 EDAEKLAEATPYKSSSV---LWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 183 XIYASADRWED 193
Y+S +W+D
Sbjct: 730 NTYSSLRQWDD 740
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +L+++YA++ + + +F + E + SW +I G +++K++E M
Sbjct: 283 DLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR 342
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
G +P++VT I+VL AC +G VE GR++F S+
Sbjct: 343 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D A + + G + ++ EVF+G+ E+D SW ++I L G KAL +++ M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 63 TLGAKPDDVTFIAVLSACS 81
G P T +VLSACS
Sbjct: 131 CDGFLPSRFTLASVLSACS 149
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 6 VGTALIKMYAQSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
VG AL+ MYA+ G V+ + VF L + + S+T++I GLA K +A+++F M
Sbjct: 175 VGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEK 234
Query: 65 GAKPDDVTFIAVLS 78
G + D V +LS
Sbjct: 235 GVQVDSVCLSNILS 248
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 3/184 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI MYA+ G +E ++ VFNG++++D +W S+I G ++G +A+ F M G
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+ +TF+ +L CSH GLV+EG + F MSS +H+ PN++HYG +DL GRAG L +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E++ D + L+R LL +C+ + N+++GE L ++ IY
Sbjct: 365 LEMIYASSCHEDPV---LWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIY 421
Query: 186 ASAD 189
++A+
Sbjct: 422 SAAN 425
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA+V T+L++ Y+ +G VE + +VF+ + +D SW +IC + G N+AL +++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G D T +A+LS+C+H + G + H ++ + + ID+ + G L
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMG-VMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 123 HEA 125
A
Sbjct: 260 ENA 262
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
VV +AL+ MYA+ G +++S +VFN + +K+ WTSII + +G + LF M
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
PD VTF++VL+AC+ G+V++G ++F+ M Y+++P+ EHY +D+LGRAG L E
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
AEEL+ ++P E + +++L +CR +GN+ MG ++A +K I
Sbjct: 630 AEELMSEVPGGPGE---SMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNI 686
Query: 185 YASADRWE 192
YA + W+
Sbjct: 687 YAEKEEWD 694
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTN-KALELFEAM 61
D VVG + I MY++SG + VF+ + KD SW S++ GL+ G +A+ +F M
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G + D V+F +V++ C H ++ R++
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQI 298
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 86/158 (54%), Gaps = 14/158 (8%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF--EAMET 63
VG + I +YA+ +E + + F + ++ SW ++I G A NG +++AL++F A ET
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 64 LGAKPDDVTFIAVLSACSHAG--LVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ P++ TF +VL+A + A V++G++ H + + P + +D+ + G
Sbjct: 469 M---PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRG 523
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+ E+E++ ++ + + + +++SA ++G+ +
Sbjct: 524 NIDESEKVFNEMSQKNQFV----WTSIISAYSSHGDFE 557
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG L+ Y++ G +E VF+ + E++ SWT++I + + A+ +F M G
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDG 367
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKL 92
P++VTF+ +++A ++EG K+
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKI 394
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE-AMETL 64
+ +LI MY + G ++ + +F+ KD SW S+I G A +G +A+ELFE M
Sbjct: 258 ISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS 317
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G KPD +T++ VLS+C HAGLV+EGRK F+ M+ + +KP L HY +DLLGR GLL E
Sbjct: 318 GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQE 376
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A EL+ +P + + +I + +LL +CR +G++ G R A ++ +
Sbjct: 377 ALELIENMPMKPNSVI---WGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANL 433
Query: 185 YASADRWED 193
YAS W++
Sbjct: 434 YASVGYWKE 442
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G++L+ +Y SG VE + +VF + E++ SWT++I G A + + L+L+ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ P+D TF A+LSAC+ +G + +GR + H + +K L I + + G L
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSV-HCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 123 HEAEELVRKLPDQ 135
+A + + ++
Sbjct: 273 KDAFRIFDQFSNK 285
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 115/192 (59%), Gaps = 4/192 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +ALI M+A+ G VE + VF+ ++D W+++I G ++G+ +A+ L+ AME
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P+DVTF+ +L AC+H+G+V EG F+ M+ + + P +HY IDLLGRAG L
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHL 475
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A E+++ +P Q V ++ ALLSAC+ + ++++GE A L ++
Sbjct: 476 DQAYEVIKCMPVQPG---VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 532
Query: 183 XIYASADRWEDV 194
+YA+A W+ V
Sbjct: 533 NLYAAARLWDRV 544
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK--EKDTASWTSIICGLAMNGKTNKALELFEA 60
D V LI +YA+ + + VF GL E+ SWT+I+ A NG+ +ALE+F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
M + KPD V ++VL+A + +++GR + S+
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKP 68
+L MYA+ G V + +F+ +K + W ++I G A NG +A+++F M +P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 69 DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 128
D ++ + +SAC+ G +E+ R ++ + + + + ++ ID+ + G + E
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDY-RDDVFISSALIDMFAKCG----SVEG 376
Query: 129 VRKLPDQTDEIIVPLYRALL 148
R + D+T + V ++ A++
Sbjct: 377 ARLVFDRTLDRDVVVWSAMI 396
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ +AL+ MY++ G ++ + ++F+ + D SWT+II G A++G ++A+ LFE M+ G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP+ V F+AVL+ACSH GLV+E F+SM+ Y + LEHY DLLGRAG L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+ K+ E ++ LLS+C + N+++ E++A + V +Y
Sbjct: 500 YNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 186 ASADRWEDV 194
AS RW+++
Sbjct: 557 ASNGRWKEM 565
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G++L+ MYA+S +E S VF+ L +D SW S++ G NG+ N+AL LF M
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
T KP V F +V+ AC+H + G++L H N+ +D+ + G +
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQL-HGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 123 HEAEELVRKLPDQTDEI 139
A ++ ++ + DE+
Sbjct: 395 KAARKIFDRM-NVLDEV 410
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGTAL+ MYA+ GC+E ++EVF L ++ SW ++I G A G KA+ E +E
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 63 TL-GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD V + VL+AC+H G +EEGR + +M + Y + P EHY +DL+ RAG
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
L +A L+ K+P + + ++ ALL+ CRT+ N+++GE L +++
Sbjct: 373 LDDALNLIEKMPMKP---LASVWGALLNGCRTHKNVELGELAVKNLLDLE 419
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+ V T ++++Y + + + +VF+ + + D W ++ G G ++ LE+F M
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD+ + L+AC+ G + +G+ + + ++ ++ +D+ + G +
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
A E+ +KL + V + AL+ YG
Sbjct: 271 ETAVEVFKKLTRRN----VFSWAALIGGYAAYG 299
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEA 60
+D V+GTALI MYA+ G +E++ VFN L +KD +++++IC LAM G T++ +LF
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSE 291
Query: 61 METL-GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
M T P+ VTF+ +L AC H GL+ EG+ F M + + P+++HYG +DL GR+
Sbjct: 292 MTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXX 179
GL+ EAE + +P + D +I + +LLS R G+I E L +
Sbjct: 352 GLIKEAESFIASMPMEPDVLI---WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Query: 180 XXXXIYASADRWEDV 194
+YA RW +V
Sbjct: 409 LLSNVYAKTGRWMEV 423
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +++ YA++G ++ + ++F+ + E++ SW+ +I G M GK +AL+LF M+
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 63 TLG-----AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
+P++ T VLSAC G +E+G K H+ YH++ ++ ID+
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 168
+ G L A+ + L + D V Y A++ YG D +L + +T
Sbjct: 246 KCGSLERAKRVFNALGSKKD---VKAYSAMICCLAMYGLTDECFQLFSEMT 293
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ DA V TAL+ MY +SG ++ ++E+F G+K K ASW ++ G AM G+ + + F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G +PD +TF +VLS C ++GLV+EG K F M S Y + P +EH +DLLGR+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L EA + ++ + + D I + A LS+C+ + ++++ E L ++
Sbjct: 548 YLDEAWDFIQTMSLKPDATI---WGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMM 604
Query: 181 XXXIYASADRWEDV 194
+Y++ +RWEDV
Sbjct: 605 MINLYSNLNRWEDV 618
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+LI MY+++G +E S +VFN +K+++ +SW SI+ G + A+ L + ME G K
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
PD VT+ ++LS + GL ++ + M +KP+ + + G L
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELF 58
DA+ +L YA G EK+L+V +KEK A SWT+I G + NG AL++F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M+ G P+ T +L L+ G+++ H ++ + +D+ G+
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV-HGFCLRKNLICDAYVATALVDMYGK 443
Query: 119 AGLLHEAEELVRKLPDQT 136
+G L A E+ + +++
Sbjct: 444 SGDLQSAIEIFWGIKNKS 461
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +A + Y + + + ++F+ + ++D +W I+ +G KA+ELF M+
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
GAK D T + +L CS+ EGR++ H ++ N+ I + R G L
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQI-HGYVLRLGLESNVSMCNSLIVMYSRNGKL 140
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
EL RK+ + + + + ++LS+ G +D
Sbjct: 141 ----ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVD 172
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 36/161 (22%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGL----------------- 45
D V T LI MY ++G + + VF+ + K+ +W S++ GL
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 46 ------------------AMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 87
A GK KAL++ M+ G P+ V++ A+ S CS G
Sbjct: 319 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 378
Query: 88 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 128
K+F M + PN + +LG LLH +E+
Sbjct: 379 NALKVFIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKEV 418
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D +V +LI+MY + G + + +VF G++++D ASW ++I G A +G+ +A+ F+ M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 62 --ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
+ +P+ VTF+ +L AC+H G V +GR+ F M Y ++P LEHYG +DL+ RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG-NIDMGERLATTLTNVKXXXXXXX 178
G + EA ++V +P + D +I +R+LL AC G ++++ E +A + K
Sbjct: 407 GYITEAIDMVMSMPMKPDAVI---WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSN 463
Query: 179 -------XXXXXIYASADRWEDV 194
+YASA RW DV
Sbjct: 464 GNCSGAYVLLSRVYASASRWNDV 486
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V LI +Y GC++ + +VF+ + E+ SW S+I L G+ + AL+LF M+
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEG 89
+PD T +VLSAC+ G + G
Sbjct: 245 R-SFEPDGYTMQSVLSACAGLGSLSLG 270
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA 66
G+ L+ MYA+ G ++ +++VF + +++ SW ++I A NG A+ F M G
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
+PD V+ + VL+ACSH G VE+G + F +MS Y + P +HY +DLLGR G EAE
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 127 ELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV-KXXXXXXXXXXXXIY 185
+L+ ++P + DEI ++ ++L+ACR + N + ER A L ++ K IY
Sbjct: 610 KLMDEMPFEPDEI---MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 186 ASADRWEDV 194
A+A WE V
Sbjct: 667 AAAGEWEKV 675
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG +L+ MYA+ E++ +F L ++ T SWT++I G G L+LF M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+ D TF VL A + + G++L + + +++ N+ G +D+ + G + +A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDA 506
Query: 126 EELVRKLPDQ 135
++ ++PD+
Sbjct: 507 VQVFEEMPDR 516
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 4/191 (2%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V+G+ALI MY++ G VE+++ VF + K+ +++S+I GLA +G+ +AL LF M T
Sbjct: 319 VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQ 378
Query: 65 GA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
KP+ VTF+ L ACSH+GLV++GR++F SM T+ ++P +HY +DLLGR G L
Sbjct: 379 TEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQ 438
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXX 183
EA EL++ + + E ++ ALL ACR + N ++ E A L ++
Sbjct: 439 EALELIKTM---SVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSN 495
Query: 184 IYASADRWEDV 194
+YASA W V
Sbjct: 496 VYASAGDWGGV 506
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + T LI YA+ G +E + E+F L KD +WT+++ G A N K +ALE F+ ME
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEG-RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + D+VT +SAC+ G + R + + S Y ++ ID+ + G
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+ EA + + ++ V Y +++ T+G
Sbjct: 334 VEEAVNVFMSMNNKN----VFTYSSMILGLATHG 363
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V A I+MY++ G ++ + +F L +++ SW S+I LA +GK ++AL LF M
Sbjct: 252 VCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLRE 311
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G KPD VTF+ +L AC H G+V +G++LF SM + + P LEHYG IDLLGR G L E
Sbjct: 312 GEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQE 371
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A +L++ +P + D ++ + LL AC +GN+++ E + L ++ I
Sbjct: 372 AYDLIKTMPMKPDAVV---WGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI 428
Query: 185 YASADRWEDV 194
YA+ ++W+ V
Sbjct: 429 YAANEKWDGV 438
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V A+I Y + G ++ ++E+F+ + K+ SWT++I G + NG ++AL++F ME
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 63 T-LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
KP+ +T ++VL AC++ G +E GR+L + N+ I++ + G+
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRL-EGYARENGFFDNIYVCNATIEMYSKCGM 265
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+ A+ L +L +Q + + + +++ + T+G D
Sbjct: 266 IDVAKRLFEELGNQRN---LCSWNSMIGSLATHGKHD 299
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G ALI MY++ G ++ ++ VF G++ K W ++I GLA++G A ++ +E L
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS 446
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPDD+TF+ VL+ACSH+GLV+EG F M + ++P L+HYG +D+L R+G + A
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+ L+ ++P + +++I +R L+AC + + GE +A L +Y
Sbjct: 507 KNLIEEMPVEPNDVI---WRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMY 563
Query: 186 ASADRWEDV 194
AS W+DV
Sbjct: 564 ASFGMWKDV 572
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 112/193 (58%), Gaps = 3/193 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ + TAL+ +Y++ G +E S VF+ + D+ +WT+++ A +G A++ FE M
Sbjct: 269 NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV 328
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PD VTF +L+ACSH+GLVEEG+ F +MS Y + P L+HY +DLLGR+GLL
Sbjct: 329 HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLL 388
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A L++++P + ++ ALL ACR Y + +G + A L ++
Sbjct: 389 QDAYGLIKEMPMEPSS---GVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 183 XIYASADRWEDVN 195
IY+++ W+D +
Sbjct: 446 NIYSASGLWKDAS 458
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 6 VGTALIKMYAQSG---CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
+G L+ Y + G C EK +F+ + E+D SW S+I G + G K E+ M
Sbjct: 68 IGDQLVGCYLRLGHDVCAEK---LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMM 124
Query: 62 -ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+G +P++VTF++++SAC + G EEGR H + + + ++ FI+ G+ G
Sbjct: 125 ISEVGFRPNEVTFLSMISACVYGGSKEEGR-CIHGLVMKFGVLEEVKVVNAFINWYGKTG 183
Query: 121 LLHEAEEL-----VRKLPDQTDEIIVPLYRALLSACRTYGNI 157
L + +L ++ L I++ L L Y N+
Sbjct: 184 DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNM 225
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V A I Y ++G + S ++F L K+ SW ++I NG K L F +G
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF----------IDL 115
+PD TF+AVL +C G+V + + L +GGF +DL
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIH-----------GLIMFGGFSGNKCITTALLDL 279
Query: 116 LGRAGLLHEAEELVRKL--PDQTDEIIVPLYRALLSACRTYG 155
+ G L ++ + ++ PD + A+L+A T+G
Sbjct: 280 YSKLGRLEDSSTVFHEITSPDSM------AWTAMLAAYATHG 315
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI +Y +SG ++ + VF+ + E + S+ +I G A +G +AL L++ M G
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ +TF+AVLSAC+H G V+EG++ F++M T+ ++P EHY IDLLGRAG L EA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E + +P + + + ALL ACR + N+ + ER A L ++ +Y
Sbjct: 503 ERFIDAMPYKPGSVA---WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMY 559
Query: 186 ASADRWEDV 194
A A +WE++
Sbjct: 560 ADARKWEEM 568
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 6 VGTALIKMYAQSGCVE---KSLEVFNGLKEKDTASWTSIICGLAMNGK-TNKALELFEAM 61
VG+ LI Y++ G + S +VF + D W ++I G +MN + + +A++ F M
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN-LEHYGGFIDLLGRAG 120
+ +G +PDD +F+ V SACS+ + +++ H ++ H+ N + I L ++G
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQI-HGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 121 LLHEAEELVRKLPD----------------------------QTDEIIVP---LYRALLS 149
L +A + ++P+ D I P + A+LS
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
Query: 150 ACRTYGNIDMGERLATTL 167
AC G +D G+ T+
Sbjct: 456 ACAHCGKVDEGQEYFNTM 473
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V A + Y++ G + +++ VF G+ E +D SW S+I + + KAL L++ M
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHS--MSSTYHMKPNLEHYG-GFIDLLGRAG- 120
G K D T +VL+A + + GR+ FH + + +H H G G ID + G
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQ-FHGKLIKAGFHQN---SHVGSGLIDFYSKCGG 290
Query: 121 --LLHEAEELVRKL--PD 134
++++E++ +++ PD
Sbjct: 291 CDGMYDSEKVFQEILSPD 308
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
++K YA+ + + ++F+ + + DT S+ ++I G A +T A+ LF+ M LG +
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 68 PDDVTFIAVLSA-CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
D T +++A C L+++ H S + F+ + GLL EA
Sbjct: 138 VDGFTLSGLIAACCDRVDLIKQ----LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 127 ELVRKLPDQTDEI 139
+ + + DE+
Sbjct: 194 SVFYGMDELRDEV 206
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +AL+ MY + G + +++ +F +K T ++ S+I A +G +KA+ELF+ ME G
Sbjct: 325 VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATG 384
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
K D +TF A+L+ACSHAGL + G+ LF M + Y + P LEHY +DLLGRAG L EA
Sbjct: 385 EKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEA 444
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E+++ + + D + + ALL+ACR +GN+++ A L ++ +Y
Sbjct: 445 YEMIKAMRMEPDLFV---WGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLY 501
Query: 186 ASADRWEDV 194
A+A WE V
Sbjct: 502 ANAGSWESV 510
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKALEL 57
D + ALI ++ EK E+ +G K D SWTSII GL N + KA +
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYK-PDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG----GFI 113
F+ M T G P+ T I +L AC+ ++ G+++ Y + LE +G +
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI-----HGYSVVTGLEDHGFVRSALL 330
Query: 114 DLLGRAGLLHEAEELVRKLPDQT 136
D+ G+ G + EA L RK P +T
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKT 353
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA + ++LI MY++ G V + +VF+ L E+D + ++I G A N + ++AL L + M+
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 63 TLGAKPDDVTFIAVLSACSH 82
LG KPD +T+ A++S SH
Sbjct: 211 LLGIKPDVITWNALISGFSH 230
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + ALI MY + G + + +F ++ K +W +I G +G AL LF+ M+
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK 670
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PDDVTF++++SAC+H+G VEEG+ +F M Y ++PN+EHY +DLLGRAGLL
Sbjct: 671 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 730
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
EA ++ +P + D I + LLSA RT+ N+++G
Sbjct: 731 EEAYSFIKAMPIEADSSI---WLCLLSASRTHHNVELG 765
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+++ VG++LI +Y++ G E +L+VF + ++ +W S+I + N +++LF
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M + G PD V+ +VL A S + +G+ L H + + + ID+ + G
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 121 LLHEAEELVRKLPDQT 136
AE + +K+ ++
Sbjct: 627 FSKYAENIFKKMQHKS 642
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-- 61
+ + +AL+ +Y++ GC + VF ++EKD +W S+I GL NGK +AL++F M
Sbjct: 408 STIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ KPD +V +AC+ + G ++ SM T + N+ IDL + GL
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGL 526
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T+L+ MY++ G V ++ VF+ + +K W +++ A N AL+LF M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
PD T V+S CS GL G+ +
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSV 395
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 120/195 (61%), Gaps = 4/195 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V +AL+ MY+++G ++ + ++F+ KE+++ ++T++I G +G +A+ LF +M+
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD +TF+AVLSACS++GL++EG K+F M Y+++P+ EHY D+LGR G +
Sbjct: 615 ESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRV 674
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXX--XXX 180
+EA E V+ L ++ + I L+ +LL +C+ +G +++ E ++ L
Sbjct: 675 NEAYEFVKGLGEEGN--IAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVL 732
Query: 181 XXXIYASADRWEDVN 195
+YA +W+ V+
Sbjct: 733 LSNMYAEEQKWKSVD 747
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 VGTALIKMYAQSGCVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
+ + LI MY++SG + S ++F +G E+D A+W S+I G NG T K +F M
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+P+ VT ++L ACS G V+ G++L H S ++ N+ +D+ +AG +
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQL-HGFSIRQYLDQNVFVASALVDMYSKAGAIK 573
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGER 162
AE++ QT E Y ++ YG MGER
Sbjct: 574 YAEDMF----SQTKERNSVTYTTMILG---YGQHGMGER 605
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 57/203 (28%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V+ +L+ MY++ G V KS VF ++E+D SW ++I NG ++ L L M+
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 65 GAKPDDVTFIAVLSACS-----------HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 113
G K D +T A+LSA S HA L+ +G + F M+S I
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSY------------LI 460
Query: 114 DLLGRAGLLHEAEELV---------------------------------RKLPDQTDEII 140
D+ ++GL+ +++L RK+ +Q
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 141 VPLYRALLSACRTYGNIDMGERL 163
++L AC G++D+G++L
Sbjct: 521 AVTVASILPACSQIGSVDLGKQL 543
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V ++ I MYA+ G +E S VF+ E++ W ++I N +++ELF +E
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LE 307
Query: 63 TLGAK---PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
+G+K D+VT++ SA S VE GR+ FH S + + + + R
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQ-FHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 120 GLLHEA 125
G +H++
Sbjct: 367 GSVHKS 372
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAM 61
D + LI MYA+ G ++ ++ VF +KEK+ SW SII +GK +L LF E +
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E G +PD +TF+ ++S+C H G V+EG + F SM+ Y ++P EHY +DL GRAG
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA E V+ +P D ++ LL ACR + N+++ E ++ L ++
Sbjct: 696 LTEAYETVKSMPFPPD---AGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLI 752
Query: 182 XXIYASADRWEDV 194
+A+A WE V
Sbjct: 753 SNAHANAREWESV 765
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G A+I MYA+ G + + E+F L ++D SW S+I A + + A+++F M G
Sbjct: 478 IGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 66 AKPDDVTFIAVLSACSHA-----GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
D V+ A LSAC++ G G + HS++S + + L ID+ + G
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL------IDMYAKCG 591
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNI 157
L A + + + ++ + + ++++AC +G +
Sbjct: 592 NLKAAMNVFKTMKEKN----IVSWNSIIAACGNHGKL 624
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ++LIK Y + G ++ ++F+ + +KD W ++ G A G + ++ F M
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ VTF VLS C+ L++ G +L H + + + + + G +A
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 126 EELVRKL 132
+L R +
Sbjct: 294 SKLFRMM 300
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKP 68
LI MY++ GC+ + + F+ +++D W+S+I +G+ ++A+ELF M E +
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI 292
Query: 69 DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 128
++V F+ +L ACSH+GL ++G +LF M Y KP L+HY +DLLGRAG L +AE +
Sbjct: 293 NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAI 352
Query: 129 VRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASA 188
+R +P +TD +I ++ LLSAC + N +M +R+ + + ++ASA
Sbjct: 353 IRSMPIKTDIVI---WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASA 409
Query: 189 DRWEDVN 195
RW DV+
Sbjct: 410 KRWRDVS 416
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D VV ++L MY ++G ++ V + ++ +W ++I G A NG L L++ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ G +P+ +TF+ VLS+CS + +G+++ H+ + + I + + G
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGC 242
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
L +A + + D+ DE+ ++ +++SA +G D L T+
Sbjct: 243 LGDAAKAFSEREDE-DEV---MWSSMISAYGFHGQGDEAIELFNTM 284
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
LI Y ++G + + +VF+ + ++ +W ++I GL + L LF M LG PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 129
+ T +V S + V G+++ H + Y ++ +L + R G L + E ++
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQI-HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 130 RKLP 133
R +P
Sbjct: 150 RSMP 153
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VV ++LI +Y + G VE VF+ + + D W S+I G A NG+ +A++LF+ M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P +TF+ VL+AC++ GLVEEGRKLF SM + P+ EH+ +DLL RAG +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA LV ++P D ++ ++L C G MG++ A + ++
Sbjct: 604 EEAINLVEEMPFDVDG---SMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLS 660
Query: 183 XIYASADRWE 192
I+A++ WE
Sbjct: 661 AIFATSGDWE 670
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ ++IK+Y G ++ + VF ++ K SW S+ G + NG T + LE F M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
L D+V+ +V+SAC+ +E G ++F + ++ + + IDL + G +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFV 501
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN----IDMGERLAT 165
+ + ++DE VP + +++S T G ID+ ++++
Sbjct: 502 EHGRRVFDTMV-KSDE--VP-WNSMISGYATNGQGFEAIDLFKKMSV 544
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+ALI YA G V +S +F+ + W S+I G N +AL LF M +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETR 315
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
D T AV++AC G +E G+++ H + + + ++ +D+ + G EA +
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQM-HCHACKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 169
L ++ + D I++ + +C G ID +R+ + N
Sbjct: 375 LFSEV-ESYDTILLNSMIKVYFSC---GRIDDAKRVFERIEN 412
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+V L++MY++SG + + +F+ + +++ SW ++I G +G+ +L F+ M
Sbjct: 63 IVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM--- 119
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
+ D ++ V+S + AG + R+LF++M + N +G ++ G E
Sbjct: 120 -PERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEE 173
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
A L ++L D I + +L AC + G+++
Sbjct: 174 ALRLFKELNFSADAITLT---TVLKACAELEALKCGKQI 209
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 6/166 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V T L+ MY + G VE++L VF + K+ A+W ++I A G +AL LF+ M
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSV-- 428
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P D+TFI VLSAC HAGLV +G + FH MSS + + P +EHY IDLL RAG+L EA
Sbjct: 429 -PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
E + + P + DEI++ A+L AC ++ + E+ L +K
Sbjct: 488 WEFMERFPGKPDEIMLA---AILGACHKRKDVAIREKAMRMLMEMK 530
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+ +G+ LI MY + G ++ + VFN + +KD +WT++I + NGK+++A +LF M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E G PD T VLSAC G +E G+++ + +S ++ N+ G +D+ G+ G
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 122 LHEAEELVRKLP 133
+ EA + +P
Sbjct: 385 VEEALRVFEAMP 396
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +LI MYA+ G V + ++F+ + E+DT SW S+I G + G A++LF ME
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDLLGRAG 120
G +PD+ T +++L ACSH G + GR L M+ T K L + G I + G+ G
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAIT--KKIGLSTFLGSKLISMYGKCG 282
Query: 121 LLHEAEELVRKL 132
L A + ++
Sbjct: 283 DLDSARRVFNQM 294
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +L+ +Y + G ++ S +FN + +D SWT+++ A G+ + ++LF+ M G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD VT V+SACS AGLVE+G++ F M+S Y + P++ HY IDL R+G L EA
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+ +P D I + LLSACR GN+++G+ A +L + IY
Sbjct: 528 MRFINGMPFPPDAI---GWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Query: 186 ASADRWEDV 194
AS +W+ V
Sbjct: 585 ASKGKWDSV 593
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG+ALI MY + C+ + VF+ +K+K+ SWT+++ G G+ +A+++F M+ G
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHY----GGFIDLLGRAGL 121
PD T +SAC++ +EEG + FH + T L HY + L G+ G
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQ-FHGKAIT----SGLIHYVTVSNSLVTLYGKCGD 421
Query: 122 LHEAEELVRKL 132
+ ++ L ++
Sbjct: 422 IDDSTRLFNEM 432
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 31/162 (19%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLK------------------------------EKD 34
+VG+ L+ MYA GC+ + +VF GL EKD
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKD 234
Query: 35 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 94
+ SW ++I GLA NG +A+E F M+ G K D F +VL AC G + EG+++ H
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI-H 293
Query: 95 SMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 136
+ + + ++ ID+ + LH A+ + ++ +
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGTAL+ MYA+ GC+E ++EVF L ++ SW ++I G A G KA + +E
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 63 TL-GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD V + VL+AC+H G +EEGR + +M + Y + P EHY +DL+ RAG
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
L +A +L+ K+P + + ++ ALL+ CRT+ N+++GE L +++
Sbjct: 373 LDDALDLIEKMPMKP---LASVWGALLNGCRTHKNVELGELAVQNLLDLE 419
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T ++++Y + + + +VF+ + + D W ++ G G ++ LE+F+ M
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD+ + L+AC+ G + +G+ + + ++ ++ +D+ + G +
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
A E+ KL + V + AL+ YG
Sbjct: 271 ETAVEVFEKLTRRN----VFSWAALIGGYAAYG 299
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VGTAL+ YA+ G + + +F+ ++EK+T +W+++I G G T +LELFE M
Sbjct: 482 VGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQ 541
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP++ TF ++LSAC H G+V EG+K F SM Y+ P+ +HY +D+L RAG L +A
Sbjct: 542 QKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQA 601
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+++ K+P Q D V + A L C + D+GE + + ++ +Y
Sbjct: 602 LDIIEKMPIQPD---VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658
Query: 186 ASADRWED 193
AS RW
Sbjct: 659 ASDGRWNQ 666
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T+L+ MY + G + + VFN D WT++I G NG N+AL LF+ M+ + K
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 68 PDDVTFIAVLSACSHAGLVEEGRK------------------LFHSMSSTYHMK------ 103
P+ VT +VLS C +E GR L H + Y +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVF 400
Query: 104 -----PNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
++ + I + G +HEA L ++ ++ +L SAC + G++
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 159 MGERL 163
+G L
Sbjct: 461 VGSSL 465
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V AL+ MYA+ + VF EKD +W SII G + NG ++AL LF M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
+ P+ VT ++ SAC+ G + G L
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSL 465
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VV T L+ MYA+ G ++ + +VFN + ++ WTS+I G N + L LF M
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 94
++ T+ ++ AC+ + +G K FH
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQG-KWFH 265
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G+AL MY++ G +E VF KD SW ++I GL+ NG+ ++ALELFE M G
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+PDDVTF+ ++SACSH G VE G F+ MS + P ++HY +DLL RAG L EA
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+E + D + L+R LLSAC+ +G ++G L + IY
Sbjct: 580 KEFIE--SANIDHGLC-LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIY 636
Query: 186 ASADRWEDV 194
+ R DV
Sbjct: 637 TALGRMRDV 645
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
TAL+ MYA++GC+ + + F+ L+E+D A WTS+I G N +AL L+ M+T G
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
P+D T +VL ACS +E G+++ H++ + ++ + + + G L +
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGN 478
Query: 127 ELVRKLPDQ 135
+ R+ P++
Sbjct: 479 LVFRRTPNK 487
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ AL+ MY++ + ++ ++F+ ++++ +W++++ G + NG++ +A++LF M + G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP + T + VL+ACS +EEG++L HS + +L +D+ +AG L +A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 126 EELVRKLPDQTDEIIVPLYRALLSA 150
RK D E V L+ +L+S
Sbjct: 377 ----RKGFDCLQERDVALWTSLISG 397
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D V T+L+ MY ++G VE L+VF + E++T +W++++ G A G+ +A+++F
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 62 -ETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
E D F AVLS+ + V GR++
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +AL+ MYA+ G +E + EVF +EKD SW S+I G A +G+ KAL++F+ M+
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
K D VTFI V +AC+HAGLVEEG K F M + P EH +DL RAG L +A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+++ +P+ I +R +L+ACR + ++G A + +K +Y
Sbjct: 652 MKVIENMPNPAGSTI---WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 708
Query: 186 ASADRWED 193
A + W++
Sbjct: 709 AESGDWQE 716
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
+ VGTAL+ Y + G VE++ +VF+G+ +KD +W++++ G A G+T A+++F +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G KP++ TF ++L+ C+ K FH + + +L + + + G +
Sbjct: 488 GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 124 EAEELVRK 131
AEE+ ++
Sbjct: 548 SAEEVFKR 555
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGT+L+ Y + + +VF+ +KE++ +WT++I G A N ++ L LF M+
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P+ TF A L + G+ G ++ H++ + + I+L + G +
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLS 149
+A R L D+T+ V + +++S
Sbjct: 246 RKA----RILFDKTEVKSVVTWNSMIS 268
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 112/195 (57%), Gaps = 9/195 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G +LI MYA+SG +E ++ F +KEKD SWTS+I G +G KA++L+ ME
Sbjct: 351 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KP+DVTF+++LSACSH G E G K++ +M + + ++ EH ID+L R+G L
Sbjct: 411 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Query: 123 HEAEELVRKLPDQTDEIIVPL----YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXX 178
EA L+R + E IV L + A L ACR +GN+ + + AT L +++
Sbjct: 471 EEAYALIR-----SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNY 525
Query: 179 XXXXXIYASADRWED 193
+YA+ W++
Sbjct: 526 INLASVYAANGAWDN 540
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+V +AL+ +YA+ G +E++ F+ +KE+D SW ++I G N + + LF+ M T
Sbjct: 149 IVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTE 208
Query: 65 GAKPDDVTFIAVLSA 79
G KPD TF ++L A
Sbjct: 209 GKKPDCFTFGSLLRA 223
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
LI +Y + G V+ + ++F+ + ++D SWT++I + G AL LF+ M K +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
T+ +VL +C G ++EG ++ H + NL + L R G + EA
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQI-HGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM-NGKTNKALELFEAMETLGAK 67
+L+ Y + G + + ++ G K++D S T++I G + N T+ A ++F+ M + K
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK 313
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA-- 125
D+V ++L C+ V GR++ + ++ ++ ID+ ++G + +A
Sbjct: 314 MDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVL 373
Query: 126 --EELVRKLPDQTDEII------------VPLYR---------------ALLSACRTYGN 156
EE+ K +I + LY +LLSAC G
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQ 433
Query: 157 IDMGERLATTLTN 169
++G ++ T+ N
Sbjct: 434 TELGWKIYDTMIN 446
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ V +++ MY + G V+++ + F ++ KD SWT +I G +G K++ +F M
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+PD+V ++AVLSACSH+G+++EG +LF + T+ +KP +EHY +DLLGRAG
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA+ L+ +P + + V +++ LLS CR +G+I++G+ + L +
Sbjct: 466 LKEAKHLIDTMPIKPN---VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMM 522
Query: 182 XXIYASADRWED 193
+Y A W +
Sbjct: 523 SNLYGQAGYWNE 534
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME--T 63
VG +L+ MY++ G + ++ +VF + ++ SW ++I G G +KAL+ F M+
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ +PD+ T ++L ACS G++ G+++ + S +H + G +DL + G L
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALL 148
A RK DQ E + + +L+
Sbjct: 264 FSA----RKAFDQIKEKTMISWSSLI 285
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ + LI MY + + +VF+ + E++ SW++++ G +NG +L LF M
Sbjct: 39 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 98
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G P++ TF L AC +E+G ++ H + +E +D+ + G
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQI-HGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 122 LHEAEELVRKLPDQT 136
++EAE++ R++ D++
Sbjct: 158 INEAEKVFRRIVDRS 172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
A + +L+ +Y + G + + + F+ +KEK SW+S+I G A G+ +A+ LF+ ++
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH--YGGFIDLLGRAGL 121
L ++ D +++ + L+ +G+++ + + LE +D+ + GL
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQM---QALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 122 LHEAEEL----------------------------VRKLPDQTDEIIVP---LYRALLSA 150
+ EAE+ VR + I P Y A+LSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 151 CRTYGNIDMGERLATTL 167
C G I GE L + L
Sbjct: 424 CSHSGMIKEGEELFSKL 440
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G A+ MY + ++ + VF + +D SW+S+I G ++G + +LF+ M G
Sbjct: 272 LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG 331
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+ VTF+ VLSAC+H GLVE+ F M Y++ P L+HY D + RAGLL EA
Sbjct: 332 IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEA 390
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E+ + +P + DE ++ A+LS C+ YGN+++GER+A L +K +Y
Sbjct: 391 EKFLEDMPVKPDEAVMG---AVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY 447
Query: 186 ASADRWED 193
++A R+++
Sbjct: 448 SAAGRFDE 455
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 4/194 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + + L+ MY++ G + S +F +D +W ++ICG A +GK +A++LFE M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KP+ VTFI++L AC+H GL+++G + F+ M Y + P L HY +D+LG++G +
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTY-GNIDMGERLATTLTNVKXXXXXXXXXX 181
A EL+R++P + D++I +R LL C + N+++ E L +
Sbjct: 757 KRALELIREMPFEADDVI---WRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLL 813
Query: 182 XXIYASADRWEDVN 195
+YA A WE V+
Sbjct: 814 SNVYADAGMWEKVS 827
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V A I MY + + ++ VF+ ++ +D SW +II NGK + L LF +M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+PD+ TF ++L AC+ G + G ++ HS M N ID+ + G+
Sbjct: 475 LRSRIEPDEFTFGSILKACT-GGSLGYGMEI-HSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 122 LHEAEEL 128
+ EAE++
Sbjct: 533 IEEAEKI 539
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +AL+ MYA+ +SL VF G+ EK++ SW++II G N + AL+ F+ M+
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTY 100
+ A + +VL +C+ + G +L H++ S +
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTAS--------------------WTSII 42
++ VG +LI MY++ G +E++ ++ + ++ S W SII
Sbjct: 516 NSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSII 575
Query: 43 CGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHM 102
G M ++ A LF M +G PD T+ VL C++ G+++ H+ +
Sbjct: 576 SGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI-HAQVIKKEL 634
Query: 103 KPNLEHYGGFIDLLGRAGLLHEAEELVRK 131
+ ++ +D+ + G LH++ + K
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDSRLMFEK 663
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +I Y++S + K+ FN + +D SW S++ G NG++ K++E+F M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 63 TLGAKPDDVTFIAVLSACS 81
G + D TF +L CS
Sbjct: 173 REGIEFDGRTFAIILKVCS 191
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 4/189 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETL 64
V ++LI MY++ G +E + + F + K T +W ++I G A +G +L+LF M
Sbjct: 445 VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQ 504
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
K D VTF A+L+ACSH GL++EG +L + M Y ++P +EHY +DLLGRAGL+++
Sbjct: 505 NVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNK 564
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A+EL+ +P D +++ + L CR G I+M ++A L ++ +
Sbjct: 565 AKELIESMPLNPDPMVL---KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHM 621
Query: 185 YASADRWED 193
Y+ +WE+
Sbjct: 622 YSDLKKWEE 630
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 8 TALIKMYAQ--SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
ALI MY Q +G +E +L +F LK KD SW SII G A G + A++ F + +
Sbjct: 344 NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE 403
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
K DD F A+L +CS ++ G+++ H++++ N I + + G++ A
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 126 EELVRKLPDQ 135
+ +++ +
Sbjct: 463 RKCFQQISSK 472
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 43/196 (21%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+ A+I YA G V + VF+GL KD SW S+I G + + A ELF M+
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH 299
Query: 65 GAKPDDVTFIAVLSACS-------------------------------------HAGLVE 87
+ D T+ +LSACS G +E
Sbjct: 300 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 359
Query: 88 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRAL 147
+ LF S+ S +L + I + GL +A + L ++ + AL
Sbjct: 360 DALSLFESLKS-----KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 148 LSACRTYGNIDMGERL 163
L +C + +G+++
Sbjct: 415 LRSCSDLATLQLGQQI 430
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +L+ MY + G VE S VF+ + KD ASW ++ A+NG + + LFE M
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PD +TF+A+LS CS GL E G LF M + + + P LEHY +D+LGRAG +
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKI 490
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA +++ +P + I + +LL++CR +GN+ +GE A L ++
Sbjct: 491 KEAVKVIETMPFKPSASI---WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVS 547
Query: 183 XIYASADRWEDVN 195
IYA A W++V+
Sbjct: 548 NIYADAKMWDNVD 560
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD VV L+K+Y +SG + + +VF+G+ E++ +W S+I L+ + ++ LF M
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ T +L ACS + G+++ H+ KP++ +D+ G+ G
Sbjct: 329 QEEMIGFSWATLTTILPACSRVAALLTGKEI-HAQILKSKEKPDVPLLNSLMDMYGKCG 386
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAM 61
+ +V A I MY++ G V+K+ +VF +K +W ++I G A++G+ ++ALE+F+ +
Sbjct: 240 NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E G KPDDV+++A L+AC HAGLVE G +F++M+ ++ N++HYG +DLL RAG
Sbjct: 300 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGR 358
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA +++ + D + L+++LL A Y +++M E + + +
Sbjct: 359 LREAHDIICSMSMIPDPV---LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLL 415
Query: 182 XXIYASADRWEDV 194
+YA+ RW+DV
Sbjct: 416 SNVYAAQGRWKDV 428
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 27/185 (14%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+++ T L+ Y+++G + + ++F+ + +D ASW ++I GL + ++A+EL++ ME
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN--LEHYG--GFID---- 114
T G + +VT +A L ACSH G V+EG +FH S+ + N ++ Y GF+D
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 115 -----------------LLGRA--GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+ G A G H A E+ KL D + Y A L+ACR G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 156 NIDMG 160
++ G
Sbjct: 323 LVEYG 327
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAM 61
+A+V ++LI MY++SG +E S VF +K D W ++I LA +G +KAL + + M
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+P+ T + +L+ACSH+GLVEEG + F SM+ + + P+ EHY IDLLGRAG
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
E + ++P + D+ I + A+L CR +GN ++G++ A L +
Sbjct: 465 FKELMRKIEEMPFEPDKHI---WNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILL 521
Query: 182 XXIYASADRWEDV 194
IYA +WE V
Sbjct: 522 SSIYADHGKWELV 534
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + T LI YA+ G +E + ++F + EK+ SWT++I G G N+AL+LF M
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
LG KP+ TF + L A + + G+++ M T +++PN ID+ ++G L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSL 362
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+E + R D+ D + + ++SA +G
Sbjct: 363 EASERVFRICDDKHDCV---FWNTMISALAQHG 392
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
++ Y +SG + ++ VF+ + E+D SW +++ G A +G ++AL ++ G K +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 129
+ +F +L+AC + ++ R+ H N+ ID + G + A
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQA-HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA---- 233
Query: 130 RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
++ D+ + ++ L+S G+++ E+L
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 12/197 (6%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ V ALI MYA+ G +E + VF + + A S+I LA++GK +ALE+F M
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E+L KPD++TFIAVL+AC H G + EG K+F M T +KPN++H+G I LLGR+G
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGK 425
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL------ATTLTNVKXXXX 175
L EA LV+++ + ++ ++ ALL AC+ + + +M E++ A ++TN
Sbjct: 426 LKEAYRLVKEMHVKPNDTVLG---ALLGACKVHMDTEMAEQVMKIIETAGSITN--SYSE 480
Query: 176 XXXXXXXXIYASADRWE 192
+YA +RW+
Sbjct: 481 NHLASISNLYAHTERWQ 497
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+A V + ++ Y + G V ++ +F + +D W ++I G A NG ++ A++ F M+
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD VT ++LSAC+ +G ++ GR++ HS+ + ++ N ID+ + G L
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 123 HEA 125
A
Sbjct: 326 ENA 328
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +VG++LI MY + GCV + +VF+ + E++ A+W ++I G NG A LFE +
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
+ VT+I ++ +E+ R+LF M
Sbjct: 140 VC---RNTVTWIEMIKGYGKRIEIEKARELFERM 170
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAME 62
T L+ +Y++ G +E + ++FNG++EK D W ++I G M+G + AL++F M
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P+++TF + L+ACSH+GLVEEG LF M Y HY +DLLGRAG L
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA L+ +P + + + ALL+AC T+ N+ +GE A L ++
Sbjct: 578 DEAYNLITTIPFEPTSTV---WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634
Query: 183 XIYASADRWEDV 194
IYA+ RW+D+
Sbjct: 635 NIYAALGRWKDM 646
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V AL+ MY G VE + +VF+ +K +D SW ++I G NG N AL +F+ M
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
D T +++L C H +E GR + H + + +E +++ + G +
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNV-HKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 123 HEAE 126
EA
Sbjct: 270 DEAR 273
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++ T+LI MYA+ V+ VF+G + T W++II G N + AL LF+ M
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR 412
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+P+ T ++L A + + + + ++ T M +L+ G + + + G L
Sbjct: 413 REDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM-SSLDAATGLVHVYSKCGTL 471
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
A ++ + ++ V L+ AL+S +G+
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V AL+ MY + G ++++ VF+ ++ +D +WT +I G +G ALEL M+ G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKL 92
+P+ VT +++S C A V +G+ L
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCL 341
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ +V +AL+ MY + VF+ L ++ +WTS+I G +GK ++ L+ FE M+
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P+ VTF+ VL+AC+H GLV++G + F+SM Y ++P +HY +D LGRAG L
Sbjct: 303 EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
EA E V K P + P++ +LL ACR +GN+ + E AT
Sbjct: 363 QEAYEFVMKSPCKEHP---PVWGSLLGACRIHGNVKLLELAATKF 404
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
L+ +YA SG ++ + +F LK +D W ++I G G + L ++ M PD
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 129
TF +V ACS +E G++ H++ +K N+ +D+ + + +
Sbjct: 209 QYTFASVFRACSALDRLEHGKRA-HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 130 RKLPDQTDEIIVPLYRALLSACRTYGNI 157
DQ V + +L+S +G +
Sbjct: 268 ----DQLSTRNVITWTSLISGYGYHGKV 291
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++ V ++LI MY++ G ++++ +F D S T++I G A +GK+ +A++LFE
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+G +PD VTFI+VL+AC+H+G ++ G F+ M TY+M+P EHYG +DLL RAG L
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+AE+++ ++ + D+++ + LL AC+ G+I+ G R A + +
Sbjct: 565 SDAEKMINEMSWKKDDVV---WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLA 621
Query: 183 XIYASADRWED 193
IY+S E+
Sbjct: 622 NIYSSTGNLEE 632
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +++KMY+ G + + +F G++ +D SW++II G G + + F M G
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP D ++LS + ++E GR++ H+++ + ++ N I++ + G + EA
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +L MY + G ++ L +F + E+D SWTS+I G+ KA+E F M
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ 305
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKL 92
P++ TF ++ SAC+ + G +L
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQL 332
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG++L+ MY + G ++KS VF+ + ++ +WT+II GL G+ + L F M
Sbjct: 145 VGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSE 204
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKL 92
D TF L AC+ V+ G+ +
Sbjct: 205 ELSDTYTFAIALKACAGLRQVKYGKAI 231
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 114/192 (59%), Gaps = 4/192 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D ++ T+LI +Y + G K+ ++F+ L +KDT S++++I G +NG +A LF AM
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
P+ VTF +LSA SH+GLV+EG K F+SM ++++P+ +HYG +D+LGRAG
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGR 482
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA EL++ +P Q + ++ ALL A + N++ GE + ++
Sbjct: 483 LEEAYELIKSMPMQPN---AGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHL 539
Query: 182 XXIYASADRWED 193
IY+S RW+D
Sbjct: 540 AMIYSSVGRWDD 551
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V + L+ MY + G + K+ VF+ KD W SII G A +G +AL++F M
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G P+ VT IA+L+ACS+AG +EEG ++F SM S + + P +EHY +D+LGRAG +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A EL+ + + D + + ALL AC+T+ +D+ E A L +
Sbjct: 485 DKAMELIESMTIKPDATV---WGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 183 XIYASADRWEDV 194
I AS +W DV
Sbjct: 542 SINASRSKWGDV 553
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V T +I Y Q+ V+ + ++F + EK SWTS++ G ++G+ A E FE M
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KP + A++ G + + R++F M + + G I R G
Sbjct: 262 M---KP-VIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-----WRGMIKAYERKGFE 312
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
EA +L ++ Q P ++LS C T ++ G ++ L +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
M + A+I + + G + K+ VF+ ++++D A+W +I G +AL+LF
Sbjct: 262 MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
M+ G +P + I++LS C+ ++ GR++
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V TA++K Y Q G V ++ +F + E++ SWT + GL +G+ +KA +L++ M
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
D V ++ G V+E R +F M + N+ + I + +
Sbjct: 169 V----KDVVASTNMIGGLCREGRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRV 219
Query: 123 HEAEELVRKLPDQTD 137
A +L +P++T+
Sbjct: 220 DVARKLFEVMPEKTE 234
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ + + ALI MYA+ G + + EVF +KEKD + I GLA NG + +F
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
E LG PD TF+ +L C HAGL+++G + F+++S Y +K +EHYG +DL GRAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
+L +A L+ +P + + I+ + ALLS CR + + E + L ++
Sbjct: 465 MLDDAYRLICDMPMRPNAIV---WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 181 XXXIYASADRWED 193
IY+ RW++
Sbjct: 522 LSNIYSVGGRWDE 534
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++ V T L+ +YA+ G +EK+ VF+ + EKD +W+++I G A N + +ELF M
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KPD + + LS+C+ G ++ G S+ + NL ID+ + G +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 123 HEAEELVRKLPDQ 135
E+ +++ ++
Sbjct: 365 ARGFEVFKEMKEK 377
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 32/190 (16%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D T+L+ +Y+ SG + + ++F+ + ++ +WT++ G +G+ +A++LF+ M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+G KPD + VLSAC H G ++ G + M M+ N ++L + G +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM-EMQKNSFVRTTLVNLYAKCGKM 263
Query: 123 HEA----EELVRK----------------LPDQTDEIIVPLYR-----------ALLSAC 151
+A + +V K P + E+ + + + LS+C
Sbjct: 264 EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC 323
Query: 152 RTYGNIDMGE 161
+ G +D+GE
Sbjct: 324 ASLGALDLGE 333
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
M ++G ALI MYA+ G + + EVF L EKD SW+S+I ++G ++ALE+F+
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G + DD+ F+A+LSAC+HAGLVEE + +F + + YHM LEHY +I+LLGR G
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFG 503
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
+ +A E+ +P + I + +LLSAC T+G +D+ ++
Sbjct: 504 KIDDAFEVTINMPMKPSARI---WSSLLSACETHGRLDVAGKI 543
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + A + MY + G V S +F K +D W+S+I G A G ++ + L M
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMK----PNLEHY---GGFIDL 115
G + + VT +A++SAC+++ L+ S +ST H + + H ID+
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLL--------SFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 116 LGRAGLLHEAEELVRKLPDQ 135
+ G L A E+ +L ++
Sbjct: 398 YAKCGSLSAAREVFYELTEK 417
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
++ TAL+ MY + + VF+ ++ K+ SWT++I G N ++LF AM+
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+P+ VT ++VL AC K H S + + F+ + R G
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VV +LI MYA+ +VF+ + +DT S+ SII +G +A++L + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
G P ++L+ C+ G + ++FH++
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETL 64
VG AL+ Y +SG +E + +F ++ ++ SW ++I G A+NGK ++LF+AM E
Sbjct: 272 VGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG 331
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
P++ TF+ VL+ CS+ G VE G +LF M + ++ EHYG +DL+ R+G + E
Sbjct: 332 KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITE 391
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
A + ++ +P + ++ +LLSACR++G++ + E A L ++ +
Sbjct: 392 AFKFLKNMPVNAN---AAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNL 448
Query: 185 YASADRWEDV 194
YA RW+DV
Sbjct: 449 YAEEGRWQDV 458
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VV +I+ + SG VE+ L +F + E+ SW S+I L+ G+ +ALELF M
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI 226
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PD+ T + VL + G+++ G+ + + S+ K + +D ++G L
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDL 286
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
A + RK+ + V + L+S G + G
Sbjct: 287 EAATAIFRKMQRRN----VVSWNTLISGSAVNGKGEFG 320
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D G+ LI +Y + GC + + VF+ L E D S ++I A NG +AL+LFE M
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
LG +P+DVT ++VL AC+++ LVEEG +LF S M N +HY +DLLGRAG L
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRL 520
Query: 123 HEAEELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXX 179
EAE L T E+I P L+R LLSAC+ + ++M ER+ + ++
Sbjct: 521 EEAEML-------TTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
Query: 180 XXXXIYASADRWEDV 194
+YAS +W V
Sbjct: 574 LMSNLYASTGKWNRV 588
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T+L+ MY + V+ SL VF ++ + SWTS+I GL NG+ AL F M K
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
P+ T + L CS+ + EEGR++ H + + Y + G IDL G+ G +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGFDRDKYAGSGLIDLYGKCG----CSD 420
Query: 128 LVRKLPDQTDEIIV 141
+ R + D E+ V
Sbjct: 421 MARLVFDTLSEVDV 434
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VG+AL+ MY + G ++ V + ++EKD T++I G + G+ +A++ F++M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+P++ T+ +VL +C + + G KL H + + L + + R L+
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 123 HEAEELVR--KLPDQT 136
++ + + + P+Q
Sbjct: 319 DDSLRVFKCIEYPNQV 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+ G+ L+ + G ++ + +VF+G+ E+ +W S+I L + ++ +A+E++ M T
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMK-PNLEHYGGFIDLLGRAGLLH 123
PD+ T +V A S L +E ++ H ++ ++ N+ +D+ + G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQR-SHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 124 EAEELVRKLPDQTDEIIVPLYRALL 148
EA+ ++ D+ +E V L AL+
Sbjct: 219 EAKLVL----DRVEEKDVVLITALI 239
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+ ALI MYA+ G + S VF + ++ SWTS++ G +G +A+ELF+ M +
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G +PD + F+AVLSAC HAGLVE+G K F+ M S Y + P+ + Y +DLLGRAG + E
Sbjct: 410 GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLAT-TLTNVKXXXXXXXXXXXX 183
A ELV ++P + DE + A+L AC+ + + + RLA + +K
Sbjct: 470 AYELVERMPFKPDE---STWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSY 526
Query: 184 IYASADRWED 193
IYA+ +W D
Sbjct: 527 IYAAEGKWVD 536
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +++ +Y + G + ++ F+ +++KD +W ++I L +++AL +F+ E+ G
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQG 308
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ TF ++++AC++ + G++L H N+E ID+ + G + ++
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQL-HGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 126 EELVRKLPDQTD 137
+ + ++ D+ +
Sbjct: 368 QRVFGEIVDRRN 379
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 109/194 (56%), Gaps = 6/194 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +L+ +Y + G +E++ VF +K +W S+I A++G++ +A+ +FE M
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Query: 63 TLGA---KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
L KPD +TFI +L+AC+H GLV +GR F M++ + ++P +EHYG IDLLGRA
Sbjct: 354 KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRA 413
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXX 179
G EA E++ + + DE I + +LL+AC+ +G++D+ E L +
Sbjct: 414 GRFDEALEVMSTMKMKADEAI---WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVA 470
Query: 180 XXXXIYASADRWED 193
+Y WE+
Sbjct: 471 MMANLYGEMGNWEE 484
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
+ V TA++ YA+SG + ++ +F + E+D SW +I+ NG +A+ LF M
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+P++VT + VLSAC+ G ++ + + H+ + + ++ +DL G+ G
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGI-HAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 122 LHEAEELVR 130
L EA + +
Sbjct: 311 LEEASSVFK 319
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 5 VVGTALIKMYAQS-GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
VV TAL+ YA S + + ++F+ + E++ SWT+++ G A +G + A+ LFE M
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM-- 219
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN 105
+ D ++ A+L+AC+ GL E LF M + ++PN
Sbjct: 220 --PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPN 259
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ + AL+ MYA+ G E + + F+ +D W S+I A +G+ KAL++ E M
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G +P+ +TF+ VLSACSHAGLVE+G K F M + ++P EHY + LLGRAG L
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRL 707
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
++A EL+ K+P + I+ +R+LLS C GN+++ E A
Sbjct: 708 NKARELIEKMPTKPAAIV---WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 183 XIYASADRWED 193
IYAS W +
Sbjct: 765 NIYASKGMWTE 775
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGT LI Y + G ++ + VF+ L EK T +WT++I G G++ +L+LF +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
PD VLSACS +E G+++ H+ Y ++ + ID + G +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 123 HEAEELVRKLPDQT 136
A +L +P++
Sbjct: 301 IAAHKLFNGMPNKN 314
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+DA + LI Y + G V + ++FNG+ K+ SWT+++ G N +A+ELF +M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNL--EHY--GGFIDLLG 117
G KPD ++L++C A L G F + Y +K NL + Y ID+
Sbjct: 342 SKFGLKPDMYACSSILTSC--ASLHALG---FGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALL 148
+ L +A RK+ D V L+ A++
Sbjct: 397 KCDCLTDA----RKVFDIFAAADVVLFNAMI 423
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D G+ALI +Y+ C++ S VF+ +K KD W S+ G + +AL LF +
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ +PD+ TF +++A + V+ G++ FH ++ N +D+ + G
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCG 604
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+VG AL+ MYA+SG +E + + F+G+ +D +W ++I G + +G +ALE F+ M
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G P+ +TFI VL ACSH G VE+G F+ + + ++P+++HY + LL +AG+ +
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
AE+ +R P + D V +R LL+AC N +G+++A I
Sbjct: 494 AEDFMRTAPIEWD---VVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 185 YASADRWEDV 194
+A + WE V
Sbjct: 551 HAKSREWEGV 560
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA +LI +Y + ++ ++F+ + E++ SW +++ G +G + L+LF++M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGRKLFH 94
G ++P++ V +CS++G +EEG++ FH
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQ-FH 159
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 5/194 (2%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-E 62
AV+ +LI MY++ G + + +F+ + E+ SW +++ G + +G + LELF M +
Sbjct: 289 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGL 121
KPD VT +AVLS CSH + + G +F M + Y KP EHYG +D+LGRAG
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
+ EA E ++++P + ++ +LL ACR + ++D+GE + L ++
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLG---SLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVIL 465
Query: 182 XXIYASADRWEDVN 195
+YASA RW DVN
Sbjct: 466 SNLYASAGRWADVN 479
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG++L+ MYA++G ++++ E+F L E+D S T+II G A G +ALE+F + + G
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG----GFIDLLGRAGL 121
P+ VT+ ++L+A S L++ G++ + + ++ L Y ID+ + G
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 122 LHEAEELVRKLPDQT 136
L A L +P++T
Sbjct: 305 LSYARRLFDNMPERT 319
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T L+ Y + C+E + +V + + EK+ SWT++I + G +++AL +F M K
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
P++ TF VL++C A + G+++ H + ++ ++ +D+ +AG + EA E
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 128 LVRKLPDQ 135
+ LP++
Sbjct: 210 IFECLPER 217
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEA 60
+D + LI MYA+ G ++ S +VF+ ++ + + SW S+I G A NG AL++F++
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M PD++TF+ VL+ACSHAG V +GRK+F M Y ++ ++H +DLLGR G
Sbjct: 825 MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L EA++ + + D L+ +LL ACR +G+ GE A L ++
Sbjct: 885 YLQEADDFIEAQNLKPD---ARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVL 941
Query: 181 XXXIYASADRWEDVN 195
IYAS WE N
Sbjct: 942 LSNIYASQGCWEKAN 956
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG++L+ MY++ +E + +VF L+EK+ W ++I G A NG+++K +ELF M++ G
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
DD TF ++LS C+ + +E G + FHS+ + NL +D+ + G L +A
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 126 EELVRKLPDQTD 137
++ ++ D+ +
Sbjct: 483 RQIFERMCDRDN 494
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG AL+ MYA+ G +E + ++F + ++D +W +II + ++A +LF+ M G
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
D + L AC+H + +G+++ H +S + +L ID+ + G++ +A
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 126 EELVRKLPD 134
++ LP+
Sbjct: 584 RKVFSSLPE 592
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++ G AL+ MYA+ + + VF + + +T WT + G G +A+ +FE M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD + F+ V++ G +++ R LF MSS P++ + I G+ G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCE 308
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
A E + + + ++LSA N+D+G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+G +L+ MY S + ++ +F+ L K WT ++ G + NG +AL+ ++ M
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHY--GGFIDLLGRAGLL 122
G PD TF+ VL CS + EGR + HS+ +H+ +L+ ID+ + G +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAI-HSL--IFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 123 HEAEELVRKLPDQTDEI 139
+ ++ ++ +++ +
Sbjct: 784 KGSSQVFDEMRRRSNVV 800
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D G++LI MY++ G ++ + +VF+ L E S ++I G + N +A+ LF+ M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEML 621
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
T G P ++TF ++ AC + G + FH + E+ G I LLG
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLG 673
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+G A++ +YA+ V + + F+ L EKD +W S++ + GK K L F ++
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHY----GGFIDLLGRAGL 121
P+ TF VLS C+ VE GR++ SM +K LE G +D+ +
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IKMGLERNSYCGGALVDMYAKCDR 210
Query: 122 LHEAEELVRKLPD 134
+ +A + + D
Sbjct: 211 ISDARRVFEWIVD 223
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG++L+ MY++ G ++ + F+ + D +WT++I A +GK N+AL+++ M+ G
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD VTF+ VLSACSH GLVEE +SM Y ++P HY +D LGR+G L EA
Sbjct: 749 FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA 808
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E + + + D ++ + LL+AC+ +G +++G+ A ++ I
Sbjct: 809 ESFINNMHIKPDALV---WGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNIL 865
Query: 186 ASADRWEDV 194
A W++V
Sbjct: 866 AEVGEWDEV 874
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D VG++L +Y++ G +E+S ++F G+ KD A W S+I G G +A+ LF
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G PD+ T AVL+ CS + G+++ H + + ++ +++ + G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 121 LLHEAEELVRKLPD 134
L A ++ +LP+
Sbjct: 601 SLKLARQVYDRLPE 614
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TA++ +YA+ G + +++EVF+ + SWT ++ G + ALE+F+ M
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS--MSSTYHMKPNLEHYGGFIDLLGRAG 120
G + ++ T +V+SAC +V E ++ H+ S +++ ++ I + ++G
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQV-HAWVFKSGFYLDSSVA--AALISMYSKSG 400
Query: 121 LLHEAEELVRKLPDQTDEIIV 141
+ +E++ L D + IV
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIV 421
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 5/168 (2%)
Query: 2 VDAV--VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 59
+DA V T+ I MYA+SG + + +VF ++ D A+++++I LA +G N+AL +FE
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFE 549
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
+M+T G KP+ F+ VL AC H GLV +G K F M + Y + PN +H+ +DLLGR
Sbjct: 550 SMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRT 609
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
G L +AE L+ Q + +RALLS+CR Y + +G+R+A L
Sbjct: 610 GRLSDAENLILSSGFQDHPVT---WRALLSSCRVYKDSVIGKRVAERL 654
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICG-LAMNGKTN----KALEL 57
D VV TAL+ MYA++G +++++++F+ + K+ ++ ++I G L M+ T+ +A +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
F M+ G +P TF VL ACS A +E GR++
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G+ALI++YA G E ++ F ++D ASWTS+I N + A +LF +
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF----IDLLGR 118
+ +P++ T ++SAC+ + G ++ Y +K ++ + I + +
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAK 506
Query: 119 AGLLHEAEELVRKL--PDQTDEIIVPLYRALLSACRTYGNID 158
+G + A ++ ++ PD V Y A++S+ +G+ +
Sbjct: 507 SGNMPLANQVFIEVQNPD------VATYSAMISSLAQHGSAN 542
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
LI MY++ G +++++ +F+ E+D SW S+I G G + L L M G
Sbjct: 189 LIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLT 248
Query: 70 DVTFIAVLSACS---HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
+VL AC + G +E+G + H ++ M+ ++ +D+ + G L EA
Sbjct: 249 TYALGSVLKACCINLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAI 307
Query: 127 ELVRKLPDQTDEIIVPLYRALLS 149
+L +P + V Y A++S
Sbjct: 308 KLFSLMPSKN----VVTYNAMIS 326
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI MYA+ G + + + F + K+ SW +II + +G ++AL+ F+ M
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+ VT + VLSACSH GLV++G F SM+S Y + P EHY +D+L RAGLL A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+E ++++P + D ++ +R LLSAC + N+++GE A L ++ +Y
Sbjct: 849 KEFIQEMPIKPDALV---WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 186 ASADRWE 192
A + +W+
Sbjct: 906 AVSKKWD 912
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
VV LI +Y+++G V+ + VF+GL+ KD +SW ++I GL+ N +A+ LF M L
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKL-----------------------FH--SMSST 99
G P F +VLSAC +E G +L FH ++ S
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 100 YHMKPNLEH-----YGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTY 154
H+ N+ Y I+ L + G +A EL +++ E +L+ AC
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 155 GNIDMGERLATTLTNV 170
G + G++L T +
Sbjct: 403 GTLFRGQQLHAYTTKL 418
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V AL+ +Y G + + +F+ + ++D ++ ++I GL+ G KA+ELF+ M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA--- 119
G +PD T +++ ACS G + G++L H+ ++ N + G ++L +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 120 -------------------------GLLHEAEELVRKLPDQTDEIIVP---LYRALLSAC 151
GLL + R E IVP Y ++L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 152 RTYGNIDMGERLATTL 167
G++++GE++ + +
Sbjct: 501 IRLGDLELGEQIHSQI 516
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++A V + LI MYA+ G ++ + ++ KD SWT++I G +KAL F M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + D+V +SAC+ ++EG+++ H+ + +L + L R G
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
+ E+ L + + D I + AL+S + GN
Sbjct: 642 IEES-YLAFEQTEAGDNIA---WNALVSGFQQSGN 672
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D AL+ +Y++ G +E+S F + D +W +++ G +G +AL +F M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G ++ TF + + A S +++G+++ H++ + E I + + G +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 123 HEAEE 127
+AE+
Sbjct: 744 SDAEK 748
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V TALI MYA+ G ++ VF +K TA+W S+I G +++G ++AL + M G
Sbjct: 486 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG 545
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD++TF+ VLSAC+H G V+EG+ F +M + + P L+HY + LLGRA L EA
Sbjct: 546 LKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEA 605
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
L+ K+ + D + + ALLSAC + +++GE +A + + +Y
Sbjct: 606 LYLIWKMDIKPDSAV---WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLY 662
Query: 186 ASADRWEDV 194
A+ W+DV
Sbjct: 663 ATEAMWDDV 671
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V T+L+ +Y + GCV + +F+ + E+DT W ++ICG + NG A +LF M G
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG 146
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P T + +L C G V +GR + H +++ ++ + + I + L A
Sbjct: 147 FSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 126 EELVRKLPDQT 136
E L R++ D++
Sbjct: 206 EVLFREMKDKS 216
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMET 63
+V LI MY++ VE L +F L+E SW S+I G +G+ + A E+F + M T
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG----GFIDLLGRA 119
G PD +T ++L+ CS + G++L Y ++ N E+ ID+ +
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLGKEL-----HGYTLRNNFENENFVCTALIDMYAKC 497
Query: 120 GLLHEAEELVRKL 132
G +AE + + +
Sbjct: 498 GNEVQAESVFKSI 510
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D V+ +LI YA+ G ++ + VF+ + +D SW S++ +++G+ + L +F+
Sbjct: 401 LADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQK 460
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M+ PD TFIA+LSACSHAG VEEG ++F SM P L HY ID+L RA
Sbjct: 461 MDI---NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAE 517
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
EAEE+++++P D ++ + ALL +CR +GN +G+ A L
Sbjct: 518 RFAEAEEVIKQMPMDPDAVV---WIALLGSCRKHGNTRLGKLAADKL 561
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 5/189 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI +Y++ G + ++ +F+ + E+DT SW +II + K + L+ FE M
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRAN 386
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
AKPD +TF++VLS C++ G+VE+G +LF MS Y + P +EHY ++L GRAG++ EA
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
++ + + E ++ ALL AC +GN D+GE A L ++ IY
Sbjct: 447 YSMI--VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIY 504
Query: 186 ASADRWEDV 194
+ A R EDV
Sbjct: 505 SKAKRAEDV 513
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTA--SWTSIICGLAMNGKTNKALELFEAMET 63
+ + L+++YA G E + EVF+ + ++D++ +W S+I G A G+ A+ L+ M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G KPD TF VL AC G V+ G +
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V AL+ MYA+ G + K+ VF+ + KD SW S++ G +G ++AL++F M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 63 TLGAKPDDVTFIAVLS 78
G +PD V +VL+
Sbjct: 289 QNGIEPDKVAISSVLA 304
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ +V +ALI +Y +SGC++ + V++ + ++ +W +++ LA NG+ +A+ F M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD ++FIA+L+AC H G+V+EGR F M+ +Y +KP EHY IDLLGRAGL
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID-MGERLATTLTNVKXXXXXXXXXX 181
EAE L+ + + D L+ LL C + + ER+A + ++
Sbjct: 516 EEAENLLERAECRND---ASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 182 XXIYASADRWED 193
+Y + R D
Sbjct: 573 SNMYKAIGRHGD 584
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VV ++L+ MY + G V ++ +VFNG+ +K++ SW++++ G NG+ KA+E+F ME
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ D F VL AC+ V G+++ H N+ IDL G++G +
Sbjct: 359 ----EKDLYCFGTVLKACAGLAAVRLGKEI-HGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSA 150
A + K+ + + + A+LSA
Sbjct: 414 DSASRVYSKMSIRN----MITWNAMLSA 437
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 3 DAVVGTALIKMYAQSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
D VG +L+ +Y + G + ++ VF+G KD SWTS++ G + KALE+F M
Sbjct: 95 DRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM 154
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN 105
+ G ++ T + + ACS G V GR FH + T+ + N
Sbjct: 155 VSFGLDANEFTLSSAVKACSELGEVRLGR-CFHGVVITHGFEWN 197
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 25 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LGAKPDDVTFIAVLSACSHA 83
VF+ + E D WT+++ + N +AL LF AM G PD TF VL+AC +
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 84 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 137
+++G+++ H T + N+ +D+ G+ G + EA ++ + +
Sbjct: 279 RRLKQGKEI-HGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 3/165 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V TAL+ Y++ G V+ + VF+ L K+ SW +++ G A +G+ A++LFE M
Sbjct: 359 EIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
P+ VTF+AVLSAC+++GL E+G ++F SMS + +KP HY I+LLGR GLL
Sbjct: 419 AANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLL 478
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
EA +R+ P +T V ++ ALL+ACR N+++G +A L
Sbjct: 479 DEAIAFIRRAPLKT---TVNMWAALLNACRMQENLELGRVVAEKL 520
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V A I MYA+ G + K+ VF+ + K SWT++I M+G L LF+ M
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD F+ VLSACSH+GL ++G +LF +M Y ++P EHY +DLLGRAG L
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGE 161
EA E + +P + D + + ALL AC+ + N+DM E
Sbjct: 411 DEAMEFIESMPVEPDGAV---WGALLGACKIHKNVDMAE 446
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V + I MY + G VE +F+ + K +W ++I G + NG LEL+E M+
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G PD T ++VLS+C+H G + G ++ + S + PN+ I + R G L
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNL 308
Query: 123 HEAEELVRKLPDQT 136
+A + +P ++
Sbjct: 309 AKARAVFDIMPVKS 322
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +L+ MYA+ G + + +F+ + KD SWT +I G M+G +A+ LF M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G + D+++F+++L ACSH+GLV+EG + F+ M ++P +EHY +D+L R G L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
+A + +P D I + ALL CR + ++ + E++A + ++
Sbjct: 653 IKAYRFIENMPIPPDATI---WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Query: 183 XIYASADRWEDV 194
IYA A++WE V
Sbjct: 710 NIYAEAEKWEQV 721
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG +L+ Y ++ V+ + +VF+ + E+D SW SII G NG K L +F M G
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+ D T ++V + C+ + L+ GR + HS+ +D+ + G L A
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 126 EELVRKLPDQT 136
+ + R++ D++
Sbjct: 351 KAVFREMSDRS 361
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
L+ MY++ G ++ + VF + ++ S+TS+I G A G +A++LFE ME G
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
PD T AVL+ C+ L++EG+++ H + ++ +D+ + G + EAE
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE-AM 61
D V AL+ MYA+ G ++++ VF+ ++ KD SW +II G + N N+AL LF +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAG 120
E PD+ T VL AC+ ++GR++ + M + Y ++ + +D+ + G
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCG 548
Query: 121 LL 122
L
Sbjct: 549 AL 550
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 13 MYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVT 72
MY ++G +E +L +F+ +++K +W +II LA NG+ +ALE+FE M++ P+ +T
Sbjct: 267 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 326
Query: 73 FIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 132
+A+L+AC+ + LV+ G +LF S+ S Y + P EHYG +DL+GRAGLL +A ++ L
Sbjct: 327 LLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
Query: 133 PDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
P + D ++ ALL AC+ + N ++G + L ++
Sbjct: 387 PFEPDASVLG---ALLGACKIHENTELGNTVGKQLIGLQ 422
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--- 61
V +L+ ++G ++ + E F + D SWT++I G + G KAL +F M
Sbjct: 153 VACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQN 212
Query: 62 ETLGAKPDDVTFIAVLSACSH--AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
E P++ TF++VLS+C++ G + G+++ H + + +D+ G+A
Sbjct: 213 ERAVITPNEATFVSVLSSCANFDQGGIRLGKQI-HGYVMSKEIILTTTLGTALLDMYGKA 271
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
G L E+ + DQ + V + A++SA + G
Sbjct: 272 GDL----EMALTIFDQIRDKKVCAWNAIISALASNG 303
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 3/193 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGT+++ YA+ G +E + F+ + EK+ SWT II A+NG +KAL LF+ M+
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P+ VT++A LSAC+H GLV++G +F SM H KP+L+HY +D+L RAG +
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEI 579
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRT-YGNIDMGERLATTLTNVKXXXXXXXXXX 181
A EL++ LP+ + + A+LS CR + + + + + ++
Sbjct: 580 DTAVELIKNLPEDV-KAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLA 638
Query: 182 XXIYASADRWEDV 194
+A+ WEDV
Sbjct: 639 SSTFAAEKSWEDV 651
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D V +LI MY++ V+ + VF+ ++ SW SI+ G N + ++ALE+F
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 61 METLGAKPDDVTFIAVLSAC 80
M + D+VT +++L C
Sbjct: 319 MVQEAVEVDEVTVVSLLRVC 338
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 10/196 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF----NGLKEKDTASWTSIICGLAMNGKTNKALELF 58
D V +LI YA+ GC++ + + F NG K+ SWT++I A++G +A+ +F
Sbjct: 291 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNG--RKNLVSWTTMISAFAIHGMGKEAVSMF 348
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEG-RKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
+ ME LG KP+ VT I+VL+ACSH GL EE + F++M + Y + P+++HYG +D+L
Sbjct: 349 KDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLR 408
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXX 177
R G L EAE++ ++P + ++ +R LL AC Y + ++ ER+ L ++
Sbjct: 409 RKGRLEEAEKIALEIPIEEKAVV---WRMLLGACSVYDDAELAERVTRKLMELERSHGGD 465
Query: 178 XXXXXXIYASADRWED 193
I+ R+ D
Sbjct: 466 YVLMSNIFCGTGRFLD 481
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D +GTAL+ MYA+ G ++ + VF+ + KD SWT++I G A++G+ ++A++ F M
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD+V F+AVL+AC ++ V+ G F SM Y ++P L+HY +DLLGRAG
Sbjct: 386 MYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGK 445
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
L+EA ELV +P D + + AL AC+ + E ++ L
Sbjct: 446 LNEAHELVENMPINPD---LTTWAALYRACKAHKGYRRAESVSQNL 488
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 36/186 (19%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+ LIK Y SG + ++ ++F + EK+ SWT++I G + G A+ + M G K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 68 PDDVTFIAVLSACSHAG-----------LVEEGRKLFHSMSSTY--------------HM 102
P++ T AVLSACS +G +++ G KL ++ + +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 103 KPNLEH-----YGGFIDLLGRAGLLHEAEELVRKL---PDQTDEIIVPLYRALLSACRTY 154
N+ H + I G H+A + R++ ++ DE++ + A+L+AC
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV---FLAVLTACLNS 407
Query: 155 GNIDMG 160
+D+G
Sbjct: 408 SEVDLG 413
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALELFEA 60
D V T+LI MY + G + +F+ K KD W +I G +G+ A+E+FE
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFEL 461
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ +P TF AVLSACSH G VE+G ++F M Y KP+ EH G IDLLGR+G
Sbjct: 462 LREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSG 521
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L EA+E++ DQ E +Y +LL +CR + + +GE A L ++
Sbjct: 522 RLREAKEVI----DQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVI 577
Query: 181 XXXIYASADRWEDV 194
IYA+ +RWEDV
Sbjct: 578 LSSIYAALERWEDV 591
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAM 61
+ +VGTALI MY++ C + + VF LK+ ++ SW S+I G+ +NG+ A+ELFE +
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLE 107
++ G KPD T+ +++S S G V E K F M S M P+L+
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLK 369
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ VGT+L+ MY++ G + +F + K ++ + I GL NG N +F M
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 62 ETLGA-KPDDVTFIAVLSACSHAGLVEEGRKL 92
+ +P+DVTF+ ++AC+ ++ GR+L
Sbjct: 222 RKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
VD TAL+ MY + V +L+V + + E+ AS + + GL NG A +F
Sbjct: 63 FVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD 122
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH-SMSSTYHMKPNLEHYGG--FIDLLG 117
G+ + VT +VL C G +E G +L +M S + M E Y G + +
Sbjct: 123 ARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEM----EVYVGTSLVSMYS 175
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDM 159
R G A + K+P ++ V Y A +S G +++
Sbjct: 176 RCGEWVLAARMFEKVPHKS----VVTYNAFISGLMENGVMNL 213
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAM 61
D V ALI MY++ G + +S +F+ +K +++ +W ++I G A +G ++AL LF +M
Sbjct: 442 DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM 501
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
++ G P +TF++VL+AC+HAGLV+E + F SM S Y ++P +EHY +++ G
Sbjct: 502 KSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQ 561
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
EA ++ +P + D+ + + ALL ACR Y N+ + A ++ ++
Sbjct: 562 FEEAMYIITSMPFEPDKTV---WGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLL 618
Query: 182 XXIYASADRWED 193
+YA W++
Sbjct: 619 YNMYADMGLWDE 630
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DA ++ YA G VE + F EK T SW SII N +A++LF M
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD T ++LSA + + G ++ + T + P++ + I + R G +
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEI 459
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
E+ + ++ + + I + A++ +GN
Sbjct: 460 MESRRIFDEMKLKREVIT---WNAMIGGYAFHGN 490
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 16 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 75
+SG + ++ ++F L+ ++T +W ++I G + N+A +LF+ M K D VT+
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNT 107
Query: 76 VLS---ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 132
++S +C +EE RKLF M S N I + + EA L K+
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNT-----MISGYAKNRRIGEALLLFEKM 162
Query: 133 PDQT 136
P++
Sbjct: 163 PERN 166
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
A G L+ MYA+SG + + ++F+ L ++D SW S++ A +G +A+ FE M
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+G +P++++F++VL+ACSH+GL++EG + M + P HY +DLLGRAG L+
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLN 415
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXX 183
A + ++P E +++ALL+ACR + N ++G A + +
Sbjct: 416 RALRFIEEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYN 472
Query: 184 IYASADRWED 193
IYAS RW D
Sbjct: 473 IYASGGRWND 482
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG+AL+ +Y + G ++ + VF+ L+ ++ SW ++I G A T KALELF+ M G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDLLGRAGLLH 123
+P ++ ++ ACS G +E+G+ + M + L + G +D+ ++G +H
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS---GEKLVAFAGNTLLDMYAKSGSIH 314
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+A RK+ D+ + V + +LL+A +G
Sbjct: 315 DA----RKIFDRLAKRDVVSWNSLLTAYAQHG 342
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V+G L+ MYA+ G +E++ +VF + ++D +WT++I G + + + AL F M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P++ T +V+ A + G +L H N+ +DL R GL+
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQL-HGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 123 HEAEELVRKLPDQTD 137
+A+ + L + D
Sbjct: 213 DDAQLVFDALESRND 227
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+L+ +YA+SG + + +V + + ++D ++TS+I G G+ AL LF+ M G K
Sbjct: 421 NSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIK 480
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
PD VT +AVLSACSH+ LV EG +LF M Y ++P L+H+ +DL GRAG L +A++
Sbjct: 481 PDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKD 540
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYAS 187
++ +P + + LL+AC +GN +G+ A L +K +YA+
Sbjct: 541 IIHNMPYKPSG---ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAA 597
Query: 188 ADRWEDV 194
A W +
Sbjct: 598 AGSWSKL 604
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V LI MY++ + +L VF +E +W SII G A K+ +A L M G
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P+ +T ++L C+ ++ G++ + K + +D+ ++G + A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
++ V L + DE+ Y +L+ YGN
Sbjct: 437 KQ-VSDLMSKRDEVT---YTSLIDG---YGN 460
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 4/153 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V LI MY + G + ++VF +EK+ +WT++I L ++G +ALE F+
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+LG KPD V+FI++L+AC H G+V+EG LF M Y ++P ++HY +DLL R G L
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYL 698
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
EAE L+R++P D P++R L C +
Sbjct: 699 KEAEHLIREMPFPAD---APVWRTFLDGCNRFA 728
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI Y + G + +F D SW +IIC A + KAL+LF +M G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ T+++VL S L+ GR++ H M + + ID + G L ++
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+ D+ + + ALLS Y N D
Sbjct: 371 RLCFDYIRDKN----IVCWNALLSG---YANKD 396
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 13 MYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVT 72
+Y++ G +S+++ + L++ DT SW I + + + +ELF+ M +PD T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 73 FIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 132
F+++LS CS + G + ++ T + ID+ G+ G + V K+
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRS----VMKV 603
Query: 133 PDQTDEIIVPLYRALLSACRTYG 155
++T E + + AL+S +G
Sbjct: 604 FEETREKNLITWTALISCLGIHG 626
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V+G ALI YA+ G +E S F+ +++K+ W +++ G A N L LF M +
Sbjct: 352 VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQM 410
Query: 65 GAKPDDVTFIAVLSAC 80
G +P + TF L +C
Sbjct: 411 GFRPTEYTFSTALKSC 426
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +L+ MY + G + ++F+ + E + S+ ++I G + NG KAL+LF +E
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G +P+ VTF+A+LSAC H G V+ G K F SM S+Y+++P +HY +DLLGR+GLL
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
+A L+ +P + ++ +LLSA +T+ +D+ E A L
Sbjct: 592 DDASNLISTMPCKPHS---GVWGSLLSASKTHLRVDLAELAAKKL 633
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T +IK ++ G + K +E+F + EKD +WT++I NG +AL F M
Sbjct: 371 DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKML 430
Query: 63 TLGAKPDDVTFIAVLSA-CSHAGLVE----EGR----------KLFHSMSSTYHM----- 102
P+ TF +VLSA S A L+E GR + +S+ S Y
Sbjct: 431 QKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTN 490
Query: 103 ----------KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACR 152
+PN+ Y I G +A +L L E + ALLSAC
Sbjct: 491 DAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACV 550
Query: 153 TYGNIDMGERLATTL 167
G +D+G + ++
Sbjct: 551 HVGYVDLGWKYFKSM 565
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 27/121 (22%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D +G +L+ MY++ G + ++ VF +K KD+ SW S+I GL + ++A ELFE M
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP 368
Query: 62 ------------------------ETLGAKP--DDVTFIAVLSACSHAGLVEEGRKLFHS 95
E G P D++T+ A++SA G EE FH
Sbjct: 369 GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK 428
Query: 96 M 96
M
Sbjct: 429 M 429
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 123 bits (308), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI MYA+ G ++ + VFN ++ D ASW ++I G + +G +AL + + M+
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KP+ +TF+ VLS CS+AGL+++G++ F SM + ++P LEHY + LLGR+G L +A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
+L+ +P + V ++RA+LSA N + R A + + +Y
Sbjct: 606 MKLIEGIPYEPS---VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 186 ASADRWEDV 194
A A +W +V
Sbjct: 663 AGAKQWANV 671
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D VG L+++Y Q G + + +VFN + + D W+ +I NG N+A++LF
Sbjct: 279 VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 61 METLGAKPDDVTFIAVLSACS 81
M P++ T ++L+ C+
Sbjct: 339 MREAFVVPNEFTLSSILNGCA 359
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+A VG ALI Y+ G V+ + VF G+ KD W I+ NG +L+L M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G P++ TF L A G + + + + + Y + P + G + L + G
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGD 297
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRT 153
+ +A ++ ++P +VP + C+
Sbjct: 298 MSDAFKVFNEMPKND---VVPWSFMIARFCQN 326
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V ALI +YA+ ++ ++++F L K+ SW ++I G G+ KA +F
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+VTF + L AC+ ++ G ++ H ++ + + ID+ + G
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
+ A+ + ++ + I V + AL+S T+G
Sbjct: 500 IKFAQSVF----NEMETIDVASWNALISGYSTHG 529
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ +L+ MY + G + + VF+ ++ KD+ASW +I G + AL++F M G
Sbjct: 404 IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAG 463
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD++TF+ +L ACSH+G + EGR M + Y++ P +HY ID+LGRA L EA
Sbjct: 464 VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
EL P + ++ +R++LS+CR +GN D+ L ++ +Y
Sbjct: 524 YELAISKPICDNPVV---WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVY 580
Query: 186 ASADRWEDV 194
A ++E+V
Sbjct: 581 VEAGKYEEV 589
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VV ALI MY +S +E++ +F + E+D +W S++C G + L LFE M
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM--SSTYHMKPNLEH-YGGFIDLLGRA 119
G +PD VT VL C + +GR++ M S + K + E + +D+ +
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 120 GLLHEAE 126
G L +A
Sbjct: 416 GDLRDAR 422
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA 66
GT+L+ MYA+ G + +++ VF G E+D + ++I G +NG A+E + M G
Sbjct: 99 GTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGI 157
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
PD TF ++L S A + + +K+ H ++ + G + + + +A+
Sbjct: 158 LPDKYTFPSLLKG-SDAMELSDVKKV-HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 127 ELVRKLPDQTDEIIVPLYRALLSA 150
++ +LPD+ D + L+ AL++
Sbjct: 216 KVFDELPDRDDSV---LWNALVNG 236
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKTNKALELFEAM 61
D VG+ L+ Y++ VE + +VF+ L ++D + W +++ G + + AL +F M
Sbjct: 194 DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM 253
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G T +VLSA + +G ++ GR + H ++ ++ ID+ G++
Sbjct: 254 REEGVGVSRHTITSVLSAFTVSGDIDNGRSI-HGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 122 LHEAEELVRKLPDQ 135
L EA + + ++
Sbjct: 313 LEEANSIFEAMDER 326
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V+ TALI MY + V + +F+ L ++ +W +I ++G+ LELFEAM
Sbjct: 286 VIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMING 345
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
+PD+VTF+ VL C+ AGLV +G+ + M + +KPN H +L AG E
Sbjct: 346 MLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEE 405
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI 184
AEE ++ LPD+ + LLS+ R GN +GE +A +L I
Sbjct: 406 AEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNI 465
Query: 185 YASADRWEDVN 195
Y+ RWEDVN
Sbjct: 466 YSVTGRWEDVN 476
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+ + A MY++ G + + +++ + SW +I L +G + F M
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+G KP VTF+++L+ACSH GLV++G + ++ + ++P +EH IDLLGR+G L
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EAE + K+P + ++++ +R+LL++C+ +GN+D G + A L+ ++
Sbjct: 719 AEAETFISKMPMKPNDLV---WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 775
Query: 183 XIYASADRWEDV 194
++A+ RWEDV
Sbjct: 776 NMFATTGRWEDV 787
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI MYA+ G + S ++FNGL ++ +W +++ A +G + L+L M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH----YGGFIDLLGR 118
+ G D +F LSA + ++EEG++L H ++ +K EH + D+ +
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLA----VKLGFEHDSFIFNAAADMYSK 612
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
G E E+V+ LP + + P + L+SA +G
Sbjct: 613 CG---EIGEVVKMLPPSVNRSL-PSWNILISALGRHG 645
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ ++G AL+ MY + G + +S V + +D +W ++I G A + +KAL F+ M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 63 TLGAKPDDVTFIAVLSACSHAG-LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + +T ++VLSAC G L+E G+ L H+ + + + I + + G
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPL-HAYIVSAGFESDEHVKNSLITMYAKCGD 514
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
L +++L L ++ + + A+L+A +G+
Sbjct: 515 LSSSQDLFNGLDNRN----IITWNAMLAANAHHGH 545
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 6 VGTALIKMYAQSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V L++MYA +G VE +L VF + KD SW S++ +G++ AL L +M +
Sbjct: 298 VCNTLLRMYAGAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G + VTF + L+AC E+GR + H + + N + + G+ G + E
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 125 AEELVRKLPDQ 135
+ ++ ++P +
Sbjct: 416 SRRVLLQMPRR 426
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TA++ +Y G V S +VF + +++ SWTS++ G + G+ + +++++ M
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEE---GRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
G ++ + V+S+C GL+++ GR++ + + ++ L I +LG
Sbjct: 153 GEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS-GLESKLAVENSLISMLGSM 208
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
G + A + DQ E + ++ +A G+I+ R+ + +
Sbjct: 209 GNVDYANYIF----DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+ + A MY++ G + + +++ + SW +I L +G + F M
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+G KP VTF+++L+ACSH GLV++G + ++ + ++P +EH IDLLGR+G L
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EAE + K+P + ++++ +R+LL++C+ +GN+D G + A L+ ++
Sbjct: 702 AEAETFISKMPMKPNDLV---WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 758
Query: 183 XIYASADRWEDV 194
++A+ RWEDV
Sbjct: 759 NMFATTGRWEDV 770
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI MYA+ G + S ++FNGL ++ +W +++ A +G + L+L M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH----YGGFIDLLGR 118
+ G D +F LSA + ++EEG++L H ++ +K EH + D+ +
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLA----VKLGFEHDSFIFNAAADMYSK 595
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
G E E+V+ LP + + P + L+SA +G
Sbjct: 596 CG---EIGEVVKMLPPSVNRSL-PSWNILISALGRHG 628
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ ++G AL+ MY + G + +S V + +D +W ++I G A + +KAL F+ M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 63 TLGAKPDDVTFIAVLSACSHAG-LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G + +T ++VLSAC G L+E G+ L H+ + + + I + + G
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDLLERGKPL-HAYIVSAGFESDEHVKNSLITMYAKCGD 497
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
L +++L L ++ + + A+L+A +G+
Sbjct: 498 LSSSQDLFNGLDNRN----IITWNAMLAANAHHGH 528
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 6 VGTALIKMYAQSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V L++MYA +G VE +L VF + KD SW S++ +G++ AL L +M +
Sbjct: 281 VCNTLLRMYAGAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 339
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G + VTF + L+AC E+GR + H + + N + + G+ G + E
Sbjct: 340 GKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Query: 125 AEELVRKLP 133
+ ++ ++P
Sbjct: 399 SRRVLLQMP 407
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TA++ +Y G V S +VF + +++ SWTS++ G + G+ + +++++ M
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEE---GRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
G ++ + V+S+C GL+++ GR++ + + ++ L I +LG
Sbjct: 136 GEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS-GLESKLAVENSLISMLGSM 191
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
G + A + DQ E + ++ +A G+I+ R+ + +
Sbjct: 192 GNVDYANYIF----DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 5/193 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D + AL+ MY + G + + FN K KD SW ++ G + G+ + +ELF+ M
Sbjct: 531 LDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRM 589
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+PD++TFI++L CS + +V +G F M Y + PNL+HY +DLLGRAG
Sbjct: 590 VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGE 648
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA + ++K+P D + + ALL+ACR + ID+GE A + +
Sbjct: 649 LQEAHKFIQKMPVTPDPAV---WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILL 705
Query: 182 XXIYASADRWEDV 194
+YA +W +V
Sbjct: 706 CNLYADCGKWREV 718
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V ALI MY + G V+ + +F+ + +D SW ++I G NG ++ LELF AM
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
L PD +T +V+SAC G GR + H+ T ++ + AG
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDI-HAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 122 LHEAEELVRK--------------------LPDQT--------------DEIIVPLYRAL 147
EAE+L + LPD+ DEI V A+
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA---AV 404
Query: 148 LSACRTYGNIDMGERL 163
LSAC T G++D G L
Sbjct: 405 LSACATLGDLDTGVEL 420
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD V +L +MY +G ++ ++F+ ++ KD SWT++I G N +KA++ + M
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ KPD++T AVLSAC+ G ++ G +L H ++ + + I++ +
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVEL-HKLAIKARLISYVIVANNLINMYSKCKC 448
Query: 122 LHEAEELVRKLPDQT 136
+ +A ++ +P +
Sbjct: 449 IDKALDIFHNIPRKN 463
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+V LI MY++ C++K+L++F+ + K+ SWTSII GL +N + +AL M+
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
A VG AL+ +YA+ G ++++ F + KD SW +++ ++G ++AL+L++ M
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G KPD+VTFI +L+ CSH+GLVEEG +F SM Y + ++H ID+ GR G L
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 124 EAEELVRKLPD-QTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA++L TD + LL AC T+ + ++G ++ L +
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLS 551
Query: 183 XIYASADRWED 193
+Y S RW++
Sbjct: 552 NLYCSTGRWKE 562
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T+ I A+SG + + +VF+G+ E DT +W +++ + G +A+ LF + AK
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
PDD +F A+LS C+ G V+ GRK+ S+ +L ID+ G+ A +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 128 LVRKL-PDQTDEI 139
+ R + D +E+
Sbjct: 127 VFRDMCCDSRNEV 139
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V ++I + G EK+LEVF+ EK+ +WT++I G NG +AL F M
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRK----LFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
G D + AVL ACS L+ G+ L H Y N ++L + G
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN-----ALVNLYAKCG 386
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
+ EA+ R D ++ +V + +L A +G D +L
Sbjct: 387 DIKEAD---RAFGDIANKDLVS-WNTMLFAFGVHGLADQALKL 425
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG +L+ MYA+ G +E S + F + K SW +++ A +G + A+ LF +M+
Sbjct: 641 VGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENE 700
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD V+F++VLSAC HAGLVEEG+++F M + ++ +EHY +DLLG+AGL EA
Sbjct: 701 LKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEA 760
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNI 157
E++R++ +T V ++ ALL++ R + N+
Sbjct: 761 VEMMRRMRVKTS---VGVWGALLNSSRMHCNL 789
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T+L+ MY++ G +E + ++F ++++D SW+++I G+ ++A+ LF M
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ KP+ VT +VL C+ G+ + H + ++ LE I + + G
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADIESELETATAVISMYAKCGRF 452
Query: 123 HEAEELVRKLP 133
A + +LP
Sbjct: 453 SPALKAFERLP 463
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +GTAL++MY ++ + + +VF+ + KD +W +++ GLA NG ++ AL LF M
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 63 TLGAKPDDVTFIAVLSACS 81
+ D V+ ++ A S
Sbjct: 194 SCCVDIDHVSLYNLIPAVS 212
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA 66
TA+I MYA+ G +L+ F L KD ++ ++ G G NKA ++++ M+ G
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 67 KPDDVTFIAVLSACSHA-----GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
PD T + +L C+ G G+ + H S H+ L + D L A +
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 122 LHE 124
L +
Sbjct: 559 LFD 561
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 119 bits (299), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D V TAL+ MY++ G + S E+F + KD W ++I ++G + + LF
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M +PD TF ++LSA SH+GLVE+G+ F M + Y ++P+ +HY IDLL RAG
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
+ EA +++ ++ D + P++ ALLS C + N+ +G+ A + +
Sbjct: 469 RVEEALDMIN--SEKLDNAL-PIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTL 525
Query: 181 XXXIYASADRWEDV 194
+A+A++W++V
Sbjct: 526 VSNFFATANKWKEV 539
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ VV T+L+ MYA+ G +E + VF+ + K SW S+I G A NG NKA E M
Sbjct: 250 MNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM 309
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
++LG +PD VT + VL ACS G ++ GR L H H+ + +D+ + G
Sbjct: 310 QSLGFQPDLVTLVGVLVACSQVGSLKTGR-LVHCYILKRHVLDRVT-ATALMDMYSKCGA 367
Query: 122 LHEAEEL 128
L + E+
Sbjct: 368 LSSSREI 374
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V ++++ +Y + G ++++ +F + ++D WT+++ G A GK+ KA+E + M+
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G D V + +L A G + GR + H + N+ +D+ + G +
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSV-HGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 123 HEAEELVRKLPDQT 136
A + ++ +T
Sbjct: 269 EVASRVFSRMMFKT 282
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 119 bits (299), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 107/194 (55%), Gaps = 4/194 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V +ALI MY++ G ++ ++ +F G+ EK+ S+ S+I GL ++G + A E F +
Sbjct: 341 LDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEI 400
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+G PD++TF A+L C H+GL+ +G+++F M S + ++P EHY + L+G AG
Sbjct: 401 LEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGK 460
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL-TNVKXXXXXXXXX 180
L EA E V L D I+ ALLS C + N + E +A + N +
Sbjct: 461 LEEAFEFVMSLQKPIDSGILG---ALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVM 517
Query: 181 XXXIYASADRWEDV 194
+YA RW++V
Sbjct: 518 LSNVYARYGRWDEV 531
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG AL+ MY++ C+ + VFN + E D + +S+I G + G +AL LF + G
Sbjct: 244 VGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSG 303
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD V VL +C+ G+++ HS ++ +++ ID+ + GLL A
Sbjct: 304 KKPDCVLVAIVLGSCAELSDSVSGKEV-HSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 126 EELVRKLPDQT 136
L +P++
Sbjct: 363 MSLFAGIPEKN 373
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + G+A++K Y+++G + ++ ++F + + D A W +I G G +K + LF M+
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHY 109
G +P+ T +A+ S GL++ L + +K NL+ +
Sbjct: 200 HRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFCLKINLDSH 241
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
A V +L+ MY++ G +E + +VF + D SW ++ GLA NG + AL FE M
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+PD VTF+ +LSACS+ L + G + F M Y+++P +EHY + +LGRAG L
Sbjct: 623 KETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLA 164
EA +V + + + +I ++ LL ACR GN+ +GE +A
Sbjct: 683 EATGVVETMHLKPNAMI---FKTLLRACRYRGNLSLGEDMA 720
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ V+ T+L+ Y+Q +E ++ V N E+D WTS++ G N + +A+ F M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMS 97
+LG +P++ T+ A+LS CS ++ G+++ HS +
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQI-HSQT 351
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++VVG++L +Y++ G +++ E+F+ L+ DT SWT +I L K +AL+ + M
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS 95
G P++ TF+ +L A S GL E K HS
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLGL--EFGKTIHS 248
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VVG +L+ YA S V+ + V +K +D ++TS++ GK AL + M
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY 520
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G + D ++ +SA ++ G +E G+ L H S +D+ + G L
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHL-HCYSVKSGFSGAASVLNSLVDMYSKCGSL 579
Query: 123 HEAEELVRKL--PD 134
+A+++ ++ PD
Sbjct: 580 EDAKKVFEEIATPD 593
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
++ + A++ MYA G ++ + VF+ ++ K +TS+I M+G A+ELF+ M
Sbjct: 620 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
PD ++F+A+L ACSHAGL++EGR M Y ++P EHY +D+LGRA
Sbjct: 680 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 739
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
+ EA E V+ + E ++ ALL+ACR++ ++GE A L ++
Sbjct: 740 VVEAFEFVKMM---KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 182 XXIYASADRWEDV 194
++A RW DV
Sbjct: 797 SNVFAEQGRWNDV 809
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGA 66
AL+ MYA++ + + +F+G +EK D W SI+ + +GK+ + LELF M G
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 126
P+ T ++ L+AC + G+++ S+ + L I + R G + +AE
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 127 ELVRKL 132
++R++
Sbjct: 341 RILRQM 346
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D V+ L+ +Y + + + VF +K KD SWTS+I A+NG ++A+ELF
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
M G D V + +LSA + + +GR++
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREI 609
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI MY + G + ++ + + D +W S+I G N +ALE F M G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
K D+V+ ++++A + G +L H+ + NL+ ID+ + L
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAGMEL-HAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
+ L++ Y + G + VF+ ++++D +W+S+I A++G AL+ F+ ME
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
PDD+ F+ VL ACSHAGL +E F M Y ++ + +HY +D+L R G EA +
Sbjct: 281 PDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYK 340
Query: 128 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYAS 187
+++ +P++ + ALL ACR YG I++ E A L V+ IY S
Sbjct: 341 VIQAMPEKP---TAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMS 397
Query: 188 ADRWED 193
R E+
Sbjct: 398 VGRQEE 403
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGL-AMNGKTNKALELFEA 60
+AVV A+I Y G V++++E++ + + +S+ +II GL + +A+E +
Sbjct: 113 NAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRK 172
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M KP+ +T +A++SACS G +++ HS + ++P+ + G ++ GR G
Sbjct: 173 MIEFRFKPNLITLLALVSACSAIGAFRLIKEI-HSYAFRNLIEPHPQLKSGLVEAYGRCG 231
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+ V+ + D ++ V + +L+SA +G+ +
Sbjct: 232 SI----VYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D + TA + MY++ G VE + +F+ E+DT + ++I G A +G K+ + FE
Sbjct: 425 LMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED 484
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G KPD++TF+A+LSAC H GLV EG K F SM Y++ P HY IDL G+A
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAY 544
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
L +A EL+ + DQ ++ V L A L+AC N ++ + + L ++
Sbjct: 545 RLDKAIELMEGI-DQVEKDAVIL-GAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQ 602
Query: 181 XXXIYASADRWEDV 194
YAS+ RW+++
Sbjct: 603 IANAYASSGRWDEM 616
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFE 59
VD+V A+I Y + G ++K+L VF E DT SW ++I G A NG +AL++
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
+ME G K D+ +F AVL+ S ++ G+++ H+ N G +D+ +
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEV-HARVLKNGSYSNKFVSSGIVDVYCKC 308
Query: 120 GLLHEAE 126
G + AE
Sbjct: 309 GNMKYAE 315
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL---FEAMET 63
+++I Y+ G + ++ +F+ L EK+ WT++ G + + LEL F A ET
Sbjct: 329 ASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANET 388
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
PD + ++VL ACS +E G+++ HS+ + M L F+D+ + G +
Sbjct: 389 --NTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL--VTAFVDMYSKCGNV 444
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
AE ++ D + E +Y A+++ C +G+
Sbjct: 445 EYAE----RIFDSSFERDTVMYNAMIAGCAHHGH 474
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D V+ A++ MY++ C + ++EVF +D W SII G NG++ + ELF +
Sbjct: 529 IDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLL 588
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E G KPD VTF+ +L AC G VE G + F SMS+ YH+ P +EHY I+L + G
Sbjct: 589 ENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGC 648
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 169
LH+ EE + +P D + L R + AC+ Y +G A L N
Sbjct: 649 LHQLEEFLLLMP--FDPPMQMLTR-INDACQRYRWSKLGAWAAKRLMN 693
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 11 IKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDD 70
I+ Y + GCV+ + E+F + E+D SW ++I A NG +++ +F M G + +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 71 VTFIAVLSACSHAGLVEEGRKL--FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 128
+F VL +C GL+ + R L H Y N++ +D+ G+ ++ +A +
Sbjct: 163 TSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 129 VRKLPDQTD---EIIVPLY 144
++ + +D +IV Y
Sbjct: 220 FDEIVNPSDVSWNVIVRRY 238
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VV T++ MY + +E + VF+ + KD SWTS + G AM+G T +A ELF+ M
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 63 ---------TLGA----------------------KPDDVTFIAVLSACSHAGLVEEGRK 91
LG D+VT + +L+ CS V+ G++
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 139
H + N+ +D+ G+ G L A R++ + DE+
Sbjct: 417 A-HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAM 61
+ +V AL+ MY + G ++ + F + E +D SW +++ G+A G++ +AL FE M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ + AKP T +L+ C++ + G K H K ++ G +D+ +
Sbjct: 489 Q-VEAKPSKYTLATLLAGCANIPALNLG-KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRC 546
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSAC 151
A E+ ++ T ++I L+ +++ C
Sbjct: 547 FDYAIEVFKEAA--TRDLI--LWNSIIRGC 572
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
L+ +Y++ G E + +VFN + K+ W +++ A + T K +ELF+ M+ G KP+
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN 317
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 129
+TF+ VL+ACSHAGLV+EGR F M + ++P +HY +D+LGRAG L EA E++
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 130 RKLP-DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASA 188
+P D T+ + + ALL++C + N ++ A + + YA+
Sbjct: 377 TNMPIDPTESV----WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAAD 432
Query: 189 DRWED 193
R+ED
Sbjct: 433 GRFED 437
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG++L+ MYA+ G + + ++F+ + +++ +W+ ++ G A G+ +AL LF+
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+D +F +V+S C+++ L+E GR++ H +S + + L + G+
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
A ++ ++P + I + +A T I++ +R+
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ ++ +L+ MYA G +E + + FN + KD SW SII A++G ++ LF M
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
P+ TF ++L+ACS +G+V+EG + F SM Y + P +EHYG +DL+GR G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 123 HEAEELVRKLPDQTDEIIVPLYR---ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXX 179
A+ + ++P VP R +LL+A R + +I + E A + ++
Sbjct: 585 SAAKRFLEEMP------FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV 638
Query: 180 XXXXIYASADRWEDVN 195
+YA A RWEDVN
Sbjct: 639 LLLNMYAEAGRWEDVN 654
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V+ TALI MY + G ++ + +F+ + EK+ SW SII NGK ALELF+ +
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKL 92
PD T ++L A + + + EGR++
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREI 453
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D +V T+++ MY++ G V + +FNG+ +++ +W +I A NG+ A F+ M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
E G +PD +T I +L A + + EGR + H + P++ ID+ G G
Sbjct: 326 EQNGLQPDVITSINLLPASA----ILEGRTI-HGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 122 LHEAEELVRKLPDQT 136
L AE + ++ ++
Sbjct: 381 LKSAEVIFDRMAEKN 395
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI +Y + GC + +VF + E+D SW S+I G G +L LF+ M
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G KPD + ++ L ACSH + G+++
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T ++ +A S +E +L++F+ + + D W +I G G +A++ + M G K
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 127
D T+ V+ + + +EEG+K+ H+M ++ I L + G +AE+
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKI-HAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 128 LVRKLPDQ 135
+ ++P++
Sbjct: 187 VFEEMPER 194
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 97/162 (59%), Gaps = 3/162 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V TALI MYA+ G + ++ +F+ + +K+ +W ++I G ++G+ +AL +F M G
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P VTF+ VL ACSHAGLV+EG ++F+SM Y +P+++HY +D+LGRAG L A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
+ + + + + + LL ACR + + ++ ++ L
Sbjct: 577 LQFIEAMSIEPGSSV---WETLLGACRIHKDTNLARTVSEKL 615
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
A V TAL +Y++ +E + ++F+ EK SW ++I G NG T A+ LF M+
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
P+ VT +LSAC+ G + G K H + + + ++ I + + G +
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 124 EAEEL 128
EA L
Sbjct: 473 EARRL 477
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V T++I YA+ G + + VF+ K++ +WT+II A++G ++ A LF+ M+ LG
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPDDVT AVLSA +H+G + + +F SM + Y ++P +EHY + +L RAG L +A
Sbjct: 463 TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDA 522
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E + K+P + I ++ ALL+ G++++ L ++ +Y
Sbjct: 523 MEFISKMP---IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLY 579
Query: 186 ASADRWED 193
A RWE+
Sbjct: 580 TQAGRWEE 587
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VG +I Y + +E + +VF+ + E+D SW S+I G + +G ++++AM
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML 225
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
KP+ VT I+V AC + + G ++ M H++ +L I + G
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN-HIQMDLSLCNAVIGFYAKCGS 284
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
L A R L D+ E Y A++S +G
Sbjct: 285 LDYA----RALFDEMSEKDSVTYGAIISGYMAHG 314
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+V A+I Y G V++++ +F+ ++ ++W ++I GL N + + F M
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G++P+ VT ++L + +++ ++ G+++ H+ + N+ ID + G L
Sbjct: 359 RCGSRPNTVTLSSLLPSLTYSSNLKGGKEI-HAFAIRNGADNNIYVTTSIIDNYAKLGFL 417
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
A+ + D++ + + A+++A +G+ D
Sbjct: 418 LGAQRVFDNCKDRS----LIAWTAIITAYAVHGDSD 449
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D+ + L+ MY + G + ++ +F + K SWTS+I A+NG KALE+F M
Sbjct: 315 DSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMC 374
Query: 62 -ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
E G P+ VTF+ V+SAC+HAGLV+EG++ F M Y + P EHY FID+L +AG
Sbjct: 375 EEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAG 434
Query: 121 LLHEAEELV-RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
E LV R + + I ++ A+LSAC ++ GE +A L
Sbjct: 435 ETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRL 482
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
TALI MY++ G + S+ VF ++EKD SW +++ G NGK +AL +F AM +
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG-GFIDLLGRAGLLHEAE 126
+ T +V+ C+ ++++G+++ H+M +L G I GL++EA
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQV-HAMVVV--TGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 127 ELVRKLPDQTDEIIVPLYRALLSAC 151
++ L TDE+++ +L+S C
Sbjct: 240 KVYNSLNVHTDEVML---NSLISGC 261
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI Y +SG E S +VF+ L + TSII G A NG +++ M+
Sbjct: 453 DVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMD 512
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ PD+VT ++VLS CSH+GLVEEG +F S+ S Y + P + Y +DLLGRAGL+
Sbjct: 513 RMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLV 572
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
+AE L+ + D + + +LL +CR + N +G R A L N++
Sbjct: 573 EKAERLLLQARGDADCVA---WSSLLQSCRIHRNETIGRRAAEVLMNLE 618
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V L+ Y+ G + S+ FN + EKD SW SI+ A G +L+LF M+ G
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG 310
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P F++ L+ CS ++ G+++ + +L ID+ G+ + +
Sbjct: 311 KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENS 370
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDM 159
L + LP E L +L+ T I+M
Sbjct: 371 ALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V +AL+ +YA V+ +L++F+ + +++ A ++ G++ + E++ ME
Sbjct: 146 NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME 205
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G + +T+ ++ CSH LV EG++L + + N+ +D G L
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNI 157
+ +P++ V + +++S C YG++
Sbjct: 266 SGSMRSFNAVPEKD----VISWNSIVSVCADYGSV 296
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
++ +L+ MYA+SG + + VF+ ++++D ++TS+I G GK AL F+ M+
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G KPD VT +AVLSACSH+ LV EG LF M + ++ LEHY +DL RAG L +
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
A ++ +P + + LL AC +GN ++GE A L
Sbjct: 580 ARDIFHTIPYEPSSAMCA---TLLKACLIHGNTNIGEWAADKL 619
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI MY++ + + VF ++ ++W SII G A N ++ + L + M G
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ +T ++L + G ++ G++ + K L + +D+ ++G + A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGE 161
+ + + + D++ Y +L+ YG + GE
Sbjct: 479 KRVFDSM-RKRDKVT---YTSLIDG---YGRLGKGE 507
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
++ +L+ MYA+SG + + VF+ ++++D ++TS+I G GK AL F+ M+
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
G KPD VT +AVLSACSH+ LV EG LF M + ++ LEHY +DL RAG L +
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 125 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
A ++ +P + + LL AC +GN ++GE A L
Sbjct: 580 ARDIFHTIPYEPSSAMCA---TLLKACLIHGNTNIGEWAADKL 619
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI MY++ + + VF ++ ++W SII G A N ++ + L + M G
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ +T ++L + G ++ G++ + K L + +D+ ++G + A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGE 161
+ + + + D++ Y +L+ YG + GE
Sbjct: 479 KRVFDSM-RKRDKVT---YTSLIDG---YGRLGKGE 507
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 2 VDAV--VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 59
+DA+ V AL YA+SG +E S +F G++ KD +W S+I G ++G AL LF
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
M+T G P+ T +++ A G V+EG+K+F+S+++ YH+ P LEH + L GRA
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 120 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXX 179
L EA + ++++ Q++ P++ + L+ CR +G+IDM A L +++
Sbjct: 675 NRLEEALQFIQEMNIQSE---TPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATES 731
Query: 180 XXXXIYA 186
IYA
Sbjct: 732 IVSQIYA 738
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T L+ MYA+ GC+ + +VF+ ++E++ +W+++I + + + +LF M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G PDD F +L C++ G VE G K+ HS+ M L + + + G L
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRT 153
A + R++ ++ ++ LL+ C+
Sbjct: 233 DFATKFFRRMRERD---VIAWNSVLLAYCQN 260
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +VG +L+ MY++ G +E + +VF+ +K KD +W S+I G G KA ELF M+
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+P+ +T+ ++S G E LF M ++ N + I + G
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 123 HEAEELVRKL 132
EA EL RK+
Sbjct: 506 DEALELFRKM 515
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +++ +YA+ G ++ + + F ++E+D +W S++ NGK +A+EL + ME G
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P VT+ ++ + G + L M T+ + ++ + I L G+ ++A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 126 EELVRKL 132
++ RK+
Sbjct: 337 LDMFRKM 343
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEA 60
V LI Y Q G + ++++ ++ D +WT++I GL NG +AL++F
Sbjct: 283 VTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRK 342
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G P+ VT ++ +SACS ++ +G ++ HS++ ++ +D+ + G
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 121 LLHEAEELVRKLPDQ 135
L +A ++ + ++
Sbjct: 402 KLEDARKVFDSVKNK 416
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKALEL 57
+ + +I Y ++G +++++F +G +++TA+W II G NGK ++ALEL
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 58 FEAMETLGAKPDDVTFIAVLSACSH 82
F M+ P+ VT +++L AC++
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPACAN 536
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 10/199 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE--KDTASWTSIICGLAMNGKTNKALELFEA 60
+ V +LI Y++ G +E SL FN L+E ++ SW S+I G A NG+ +A+ +FE
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 61 M-ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN---LEHYGGFIDLL 116
M + +P++VT + VL AC+HAGL++EG F+ + Y PN LEHY +D+L
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDML 379
Query: 117 GRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXX 176
R+G EAEEL++ +P + ++ALL C+ + N + + A+ + +
Sbjct: 380 SRSGRFKEAEELIKSMPLDPG---IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVS 436
Query: 177 XXXXXXXIYASADRWEDVN 195
Y++ + W++V+
Sbjct: 437 SYVMLSNAYSAMENWQNVS 455
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ALI M A+ G ++++ ++F + ++D S+ S++ G+A++G ++A+ LFE M G
Sbjct: 342 VVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
PD+V F +L C + LVEEG + F M Y + + +HY ++LL R G L EA
Sbjct: 402 IVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEA 461
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
EL++ +P + + +LL C +GN ++ E +A L ++ IY
Sbjct: 462 YELIKSMPFEAH---ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIY 518
Query: 186 ASADRWEDV 194
A+ DRW DV
Sbjct: 519 AALDRWTDV 527
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + T++I YA+ G + + ++F + D +W+++I G A NG+ N+A ++F M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNL--EHY--GGFIDLLGR 118
KPD+ + ++SACS G E L + S H + N HY ID+ +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFE----LCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 119 AGLLHEAEELVRKLPDQ 135
G + A +L ++P +
Sbjct: 353 CGHMDRAAKLFEEMPQR 369
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+AV TAL+ Y +SG +E++ +F+ + E++ SW +++ GL +G A +LF+ M
Sbjct: 175 NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEM- 233
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
K D +++ +++ + G + R LF ++ + I + G
Sbjct: 234 ---PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGV-----DVRAWSALILGYAQNGQP 285
Query: 123 HEAEELVRKLPDQT---DEIIVPLYRALLSACRTYGNIDMGERLATTL 167
+EA ++ ++ + DE I+ L+SAC G ++ E++ + L
Sbjct: 286 NEAFKVFSEMCAKNVKPDEFIMV---GLMSACSQMGCFELCEKVDSYL 330
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +LI Y+++G + ++L F+ ++E D SWTS+I LA +G ++L++FE+M
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQK 437
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+PD +TF+ VLSACSH GLV+EG + F M+ Y ++ EHY IDLLGRAG + EA
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEA 497
Query: 126 EELVRKLPDQ 135
+++ +P +
Sbjct: 498 SDVLNSMPTE 507
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 39/200 (19%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V TAL+ MYA+S + + E F + ++ SW ++I G A NG+ +A+ LF M
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML 334
Query: 63 TLGAKPDDVTFIAVLSACS-----------HAGLVEEGRKLFHSMSST------------ 99
+PD++TF +VLS+C+ A + ++G F S++++
Sbjct: 335 LENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLS 394
Query: 100 -----YH--MKPNLEHYGGFIDLLGRAGLLHEA----EELVRKLPDQTDEIIVPLYRALL 148
+H +P+L + I L G E+ E +++KL Q D+I + +L
Sbjct: 395 EALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKL--QPDKIT---FLEVL 449
Query: 149 SACRTYGNIDMGERLATTLT 168
SAC G + G R +T
Sbjct: 450 SACSHGGLVQEGLRCFKRMT 469
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
L+ +YA+ G ++ + VF +D +T+++ G A++G+ +AL ++ M KPD
Sbjct: 608 LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPD 667
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 129
V +L+AC HAGL+++G +++ S+ + + MKP +E Y +DL+ R G L +A V
Sbjct: 668 HVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFV 727
Query: 130 RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASAD 189
++P + + I + LL AC TY +D+G +A L + +YA+
Sbjct: 728 TQMPVEPNANI---WGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADA 784
Query: 190 RWEDV 194
+WE V
Sbjct: 785 KWEGV 789
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +L+ Y + G +E++ +F + KD SW +I G A N + KA +LF + G
Sbjct: 265 VCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG 324
Query: 66 -AKPDDVTFIAVLSACSHAGLVEEGRKL 92
PD VT I++L C+ + G+++
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 3 DAVVGTALIKMYAQSGCV-EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
D +VG AL+ MYA+ G + + F+G+ +KD SW +II G + N A F M
Sbjct: 156 DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
Query: 62 ETLGAKPDDVTFIAVLSACSHAG---LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+P+ T VL C+ GR++ + ++ ++ + R
Sbjct: 216 LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR 275
Query: 119 AGLLHEAEELVRKL 132
G + EA L ++
Sbjct: 276 VGRIEEAASLFTRM 289
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +G +LI MYA+ + ++++FN ++E D SW S+I + ++AL L+ M
Sbjct: 555 DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN 614
Query: 63 TLGAKPDDVTFIAVLSACSH--AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
KPD +T V+SA + + + R LF SM + Y ++P EHY F+ +LG G
Sbjct: 615 EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWG 674
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
LL EAE+ + +P Q + V + RALL +CR + N + +R+A + + K
Sbjct: 675 LLEEAEDTINSMPVQPE---VSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 181 XXXIYASADRW 191
IY+++ W
Sbjct: 732 KSNIYSASGFW 742
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DAV T +I Y G V+ ++E+F + EK+T ++ +++ G NG KAL+LF M
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGR--KLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
G + D + + + AC GLV E + + H + N +D+ R
Sbjct: 410 QRGVELTDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 121 LLHEAEELVRKLPDQTD 137
+ +AEE+ + P D
Sbjct: 467 RMADAEEMFDQWPSNLD 483
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 6 VGTALIKMYAQ---SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
V +L+ +Y + S C + L++F+ + ++D ASW +++ L GK++KA +LF M
Sbjct: 218 VSNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMN 276
Query: 63 TL-GAKPDDVTFIAVLSACSHAGLVEEGRKL 92
+ G D T +LS+C+ + ++ GR+L
Sbjct: 277 RVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D TALI MYA+ G + + VF + + SW+S+I M+G+ A+ F M
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KP++V F+ VLSAC H+G VEEG+ F+ M S + + PN EH+ FIDLL R+G L
Sbjct: 598 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDL 656
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA ++++P D ++ +L++ CR + +D+ + + L+++
Sbjct: 657 KEAYRTIKEMPFLAD---ASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLS 713
Query: 183 XIYASADRWED 193
IYA WE+
Sbjct: 714 NIYAEEGEWEE 724
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +LI MY++SG V+ + VFN +K + +W S++CG + NG + +A+ LF+ M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ ++VTF+AV+ ACS G +E+G+ + H + +L ID+ + G L
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL--IISGLKDLFTDTALIDMYAKCGDL 555
Query: 123 HEAEELVRKL 132
+ AE + R +
Sbjct: 556 NAAETVFRAM 565
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
DAV+ T+L+ MY Q+G + + +VF+G+ +D +W++++ NG+ KAL +F+ M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G +PD VT I+V+ C+ G + R +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSV 224
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D + +L+ MY++ G + S +F + +K+ SWT++I + KAL F M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG-GFIDLLGRAG 120
G +P+ VT +VLS+C GL+ EG+ + H + + PN E ++L G
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSV-HGFAVRRELDPNYESLSLALVELYAECG 353
Query: 121 LLHEAEELVRKLPDQT 136
L + E ++R + D+
Sbjct: 354 KLSDCETVLRVVSDRN 369
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKP 68
AL+++YA+ G + V + +++ +W S+I A G +AL LF M T KP
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 69 DDVTFIAVLSACSHAGLVEEGRKL 92
D T + +SAC +AGLV G+++
Sbjct: 404 DAFTLASSISACENAGLVPLGKQI 427
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET 63
++V TAL+ MY++ G +E + F+ + KD SW +I G +GK + ALE++
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLH 542
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G +P+ V F+AVLS+CSH G+V++G K+F SM + ++PN EH +DLL RA +
Sbjct: 543 SGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIE 602
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXX 183
+A + + + + + +L ACR G ++ + + + +K
Sbjct: 603 DAFKFYK---ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGH 659
Query: 184 IYASADRWEDVN 195
+A+ RW+DV+
Sbjct: 660 SFAAMKRWDDVS 671
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D +LI MYA+ G ++KSL +F + E+D SW +II G A N KAL LFE M
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 62 ETLGAKP-DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ + D T +++L ACS AG + G KL H + ++P +D+ + G
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 121 LLHEAEE 127
L A+
Sbjct: 498 YLEAAQR 504
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
VD + TALI MY + G E S V + KD WT +I GL G+ KAL +F M
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEG 89
G+ +V+++C+ G + G
Sbjct: 338 LQSGSDLSSEAIASVVASCAQLGSFDLG 365
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + ++L+ +YA+ G + + +VF ++E+D WT++I + G +A L M
Sbjct: 80 DFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGR-KLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KP VT + +LS G++E + + H + Y ++ ++L +
Sbjct: 140 FQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNI 157
+ +A++L DQ ++ + + ++S + GN+
Sbjct: 195 VGDAKDLF----DQMEQRDMVSWNTMISGYASVGNM 226
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V +++ +Y + V + ++F+ ++++D SW ++I G A G ++ L+L M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G +PD TF A LS +E GR L
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EA 60
+D V T+L++MY ++G V+ ++ VF KD W ++I GLA N + ++L +F +
Sbjct: 368 LDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ KPD VT + +L AC +AG V EG ++F SM + + P EHY I+LL R G
Sbjct: 428 LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVG 487
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXX 180
+++EA+++ K+P + I + +L A G+ + E +A T+ +
Sbjct: 488 MINEAKDIADKIPFEPSSHI---WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 181 XXXIYASADRWED 193
IY RWE+
Sbjct: 545 LIKIYEMTWRWEN 557
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
VV +++ MY + G + +L VF ++++D SW +I + +G AL+ F M +
Sbjct: 170 VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM 229
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
+PD+ T V+S CS + +G++ ++ N G ID+ + L +
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 125 AEELVRKL 132
+ +L R+L
Sbjct: 289 SVKLFREL 296
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 7 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA 66
G +++Y +SG V +L++F+ + +K+T +W + GL NG N AL+LF+ M
Sbjct: 42 GNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM----P 97
Query: 67 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKP 104
+ D V++ ++S G E G ++F M + ++P
Sbjct: 98 ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRP 134
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
++ T+LI MYA+ G + + VF +KE D W +II GLA +G ++L+LF M
Sbjct: 277 ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR 336
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
PD++TF+ +L+ACSH GLV+E F S+ + +P EHY +D+L RAGL+
Sbjct: 337 ESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLV 395
Query: 123 HEAEELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGERLATTLTNVK 171
+A + + ++P I P + ALL+ C +GN+++ E + L ++
Sbjct: 396 KDAHDFISEMP------IKPTGSMLGALLNGCINHGNLELAETVGKKLIELQ 441
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V +++ YA+SG V + VF+ + E+D +W+S+I G G+ NKALE+F+ M +
Sbjct: 175 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 65 G-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G +K ++VT ++V+ AC+H G + G K H H+ + ID+ + G +
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRG-KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIG 293
Query: 124 EAEELV-RKLPDQTDEIIVPLYRALLSACRTYGNI 157
+A + R +TD + ++ A++ ++G I
Sbjct: 294 DAWSVFYRASVKETDAL---MWNAIIGGLASHGFI 325
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V AL+ MY+ G +E ++VF ++W S+I +G KA+ELF+ +
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 63 TLG-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ +P+ +FI++LSACSH+G ++EG + M + +KP EH +D+LGRAG
Sbjct: 773 SNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGK 832
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXX 181
L EA E + + + ++ ALLSAC +G+ +G+ +A L ++
Sbjct: 833 LREAYEFITGIGEPQK---AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISL 889
Query: 182 XXIYASADRWED 193
Y WE+
Sbjct: 890 ANTYVGLGGWEE 901
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VG ++I MY++ G E + VF L +D S +I+ G A NG +A + M+++
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 66 A-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN-LEHYGGFIDLLGRAGLLH 123
+PD T +++ S C EGR + H + M+ LE ID+ G+ GL
Sbjct: 388 KIQPDIATVVSITSICGDLSFSREGRAV-HGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 124 EAEELVR 130
+AE L +
Sbjct: 447 QAELLFK 453
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D+ + AL+ +YA+ + + VF ++ +D SW +I+ NG K+L+ F++M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 63 TLGAKPDDVTFIAVLSACS 81
G + D VTF V+SACS
Sbjct: 282 GSGQEADTVTFSCVISACS 300
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D + LI MY + +E +++VF + + + SW +I L+ N E+F+
Sbjct: 614 LDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN---KAGREVFQLF 670
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAG 120
L +P+++TF+ +LSA + G G + H + + P + +D+ G
Sbjct: 671 RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCG 728
Query: 121 LLHEAEELVRK 131
+L ++ R
Sbjct: 729 MLETGMKVFRN 739
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V AL+ MY ++G E + +F+ D W S++ + +G KAL FE + G
Sbjct: 540 VCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG 599
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
PD VT++++L+ACSH G +G+ L++ M +K +HY ++L+ +AGL+ EA
Sbjct: 600 FMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEA 658
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
EL+ + P ++ L+R LLSAC N+ +G A + + +Y
Sbjct: 659 LELIEQSPPGNNQ--AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLY 716
Query: 186 ASADRWEDV 194
A RWEDV
Sbjct: 717 AVNGRWEDV 725
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
VGT L+ MY ++ E + +VF+ +KE+D WT +I G + G + A++ F M
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+ D + +V+ ACS ++ +G ++FH ++ + G +D+ G+ G +E
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNG-KYET 556
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
E + L D + + ++L A +G ++
Sbjct: 557 AETIFSLASNPD---LKCWNSMLGAYSQHGMVE 586
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VV T+++ MY+ G +E + +F+ + +D +W ++I G N K L F M
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P T+ VL+ CS G G KL H+ +L +D+ G +
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLG-KLIHARIIVSDSLADLPLDNALLDMYCSCGDM 351
Query: 123 HEA 125
EA
Sbjct: 352 REA 354
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ D + AL+ MY G + ++ VF + + SW SII G + NG +A+ ++
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRR 391
Query: 61 METLGA-KPDDVTFIAVLSACSHAGLVEEGRKLFH 94
+ + +PD+ TF A +SA + G KL H
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHG-KLLH 425
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D + +I M+ + + + VF+ + +KD SW ++C + NG + AL LFE M
Sbjct: 270 DPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT 329
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KP++ TF+ V AC+ G +EE F SM + + + P EHY G + +LG+ G L
Sbjct: 330 KHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHL 389
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV 170
EAE+ +R LP E + A+ + R +G+ID+ + + + +V
Sbjct: 390 VEAEQYIRDLP---FEPTADFWEAMRNYARLHGDIDLEDYMEELMVDV 434
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VV T+L+ MYA+ G + + ++F ++ S+TS+I A +G A++LF+ M
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
P+ VT + VL ACSH+GLV EG + M+ Y + P+ HY +D+LGR G +
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRV 389
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 182
EA EL + + ++ + L+ ALLSA R +G +++ + L
Sbjct: 390 DEAYELAKTIEVGAEQGAL-LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALS 448
Query: 183 XIYASADRWED 193
YA + WED
Sbjct: 449 NAYAVSGGWED 459
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALELFEA 60
+ VV ++L+ MY + VE + VF+ + ++ SWTS+I A N + ++A+ELF +
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 61 MET--LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ + +V+SACS G ++ G K+ H + + + N +D+ +
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAK 283
Query: 119 AGLLHEAEELVRKL 132
G L AE++ ++
Sbjct: 284 CGSLSCAEKIFLRI 297
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 47/200 (23%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 61
D L+ Y + + + ++F+ + E + SWTS+I G GK AL +F+ M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 62 ETLGAKPDDVTFIAVLSACS-----------HAGL------------------------V 86
E P++ TF +V ACS HA L V
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 87 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL-----PDQTDEIIV 141
E R++F SM N+ + I + HEA EL R D+ ++ ++
Sbjct: 183 ETARRVFDSMIG---YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 142 PLYRALLSACRTYGNIDMGE 161
+++SAC + G + G+
Sbjct: 240 A---SVISACSSLGRLQWGK 256
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 3/189 (1%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ T+L+ MYA+ G + K+ +VF + ++I A+ G +A+ L+ ++E +G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
KPD++T VLSAC+HAG + + ++F + S MKP LEHYG +DLL AG +A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
L+ ++P + D ++ ++L+++C ++ + L+ L + Y
Sbjct: 704 LRLIEEMPFKPDARMI---QSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAY 760
Query: 186 ASADRWEDV 194
A W++V
Sbjct: 761 AVEGSWDEV 769
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V+ + ++ MYA+ G + + +VF+ EKD W +++ A +G + +AL LF M+
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G P+ +T+ ++ + G V+E + +F M S+ + PNL + ++ + + G
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCS 527
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
EA +RK+ + LSAC ++ +G +
Sbjct: 528 EEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V ++L MY + G ++ + +VF+ + +++ +W +++ G NGK +A+ LF M G
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+P VT LSA ++ G VEEG++ H+++ M+ + ++ + GL+ A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQ-SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 126 EELVRKL 132
E + ++
Sbjct: 329 EMVFDRM 335
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D ++GT+L+ Y + G +E + VF+ + EKD +W II G G A+ + + M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
K D VT ++SA + ++ G+++ + + ++ +D+ + G
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLASTVMDMYAKCGS 425
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSA 150
+ +A +K+ D T E + L+ LL+A
Sbjct: 426 IVDA----KKVFDSTVEKDLILWNTLLAA 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF-NGLK-EKDTASWTSIICGLAMNGKTNKALELFEA 60
+ +V +AL+ MY++SG + + ++F NGL ++D SW S+I A +G +A+E++
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G KP VT++ +L ACSHAGLVE+G + F + + EHY +DL GRAG
Sbjct: 425 MRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAG 484
Query: 121 LLHEAEELVRKLPDQTDE--IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXX 178
L + + D+ + Y A+LSAC + + + + + +
Sbjct: 485 RLKDVTNFI-----NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTY 539
Query: 179 XXXXXIYASADRWED 193
IYA+ + E+
Sbjct: 540 VLMSNIYAANGKREE 554
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V +I YAQSG ++K+LE+F+ + E++ SW S++ L G+ ++A+ LFE M
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM- 197
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ D V++ A++ + G V+E R+LF M N+ + I + +
Sbjct: 198 ---PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQNNRI 249
Query: 123 HEAEELVRKLPDQ 135
EA++L + +P++
Sbjct: 250 DEADQLFQVMPER 262
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ V TA++ Y +S + + +F + E++ SW ++I G A +G+ +KALELF+ M
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM- 166
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ + V++ +++ A G ++E LF M + ++ + +D L + G +
Sbjct: 167 ---PERNIVSWNSMVKALVQRGRIDEAMNLFERMP-----RRDVVSWTAMVDGLAKNGKV 218
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
EA L +P++ + + A+++ ID ++L
Sbjct: 219 DEARRLFDCMPERN----IISWNAMITGYAQNNRIDEADQL 255
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 34/129 (26%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM------ 61
A+I YAQ+ ++++ ++F + E+D ASW ++I G N + NKA LF+ M
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 62 ----------------ETLG----------AKPDDVTFIAVLSACSH-AGLVEEGRKLFH 94
E L KP+ T++++LSACS AGLV EG+++
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIHQ 355
Query: 95 SMSSTYHMK 103
+S + H K
Sbjct: 356 LISKSVHQK 364
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 69
LI + G + ++ ++F+GL E+D +WT +I G G +A ELF+ +++ + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKN 108
Query: 70 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 129
VT+ A++S + + LF M N+ + ID ++G + +A EL
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPER-----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 130 RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
++P++ + +AL+ R +++ ER+
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D ++I+MY+ G VE +L VFN + E++ +W +I A NG+ A++ F +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KPD F + AC G + EG F SM Y + P +EHY + +L G L
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGER 162
EA V + D L+ L++ R +G++ +G+R
Sbjct: 335 DEALRFVESMEPNVD-----LWETLMNLSRVHGDLILGDR 369
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+D L++MY+ G ++ VF + EK+ +W II A NG A+++F
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ G PD F + AC G V+EG F SMS Y + P++E Y +++ G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
L EA E V ++P + + V ++ L++ R +GN+++G+ A +
Sbjct: 407 LDEALEFVERMPMEPN---VDVWETLMNLSRVHGNLELGDYCAEVV 449
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +IKMY + G + + F+ + K + +WT+II N A+ FE M + G
Sbjct: 556 VSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG 615
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P+ TF AVLS CS AG V+E + F+ M Y+++P+ EHY I+LL R G + EA
Sbjct: 616 FTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Query: 126 EEL 128
+ L
Sbjct: 676 QRL 678
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V + LI +Y + G + VF G K+++ SWT+++ G A NG+ ++AL M+ G
Sbjct: 354 VHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+PD VT VL C+ +++G+++ H + PN+ + + + G+
Sbjct: 414 FRPDVVTIATVLPVCAELRAIKQGKEI-HCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 67
T+L+ MY++ G E + +F+ L++++ +WT++I N +E+F M +
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHR 516
Query: 68 PDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
PD VT VL+ CS ++ G++L H + + P + I + G+ G L A
Sbjct: 517 PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 60
++D +GTALI MY++ G ++ + +VF+ ++ K A+W S+I L ++G +AL LFE
Sbjct: 283 VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEE 342
Query: 61 METLGA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
ME + +PD +TF+ VLSAC++ G V++G + F M Y + P EH I LL +A
Sbjct: 343 MEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQA 402
Query: 120 GLLHEAEELVRKLPDQTD 137
+ +A LV + D
Sbjct: 403 LEVEKASNLVESMDSDPD 420
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+DA +I+MY+ + +L VFN + ++++ +W ++I LA NG+ +A+++F
Sbjct: 141 LDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF 200
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
G KPD F AV AC G + EG F SM Y M ++E Y I++L G
Sbjct: 201 IEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGH 260
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLA 164
L EA + V ++ T E V ++ L++ C G +++G+R A
Sbjct: 261 LDEALDFVERM---TVEPSVEMWETLMNLCWVQGYLELGDRFA 300
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
V +L+ MY + G +E + +FN ++ +D +WT +I G A NG
Sbjct: 467 VNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---------------- 510
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
L+E+ ++ F SM + Y + P EHY IDL GR+G +
Sbjct: 511 -------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKV 551
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY 185
E+L+ ++ + D + ++A+L+A R +GNI+ GER A TL ++ +Y
Sbjct: 552 EQLLHQMEVEPDATV---WKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMY 608
Query: 186 ASADRWED 193
++A R ++
Sbjct: 609 SAAGRQDE 616
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+V AL+ MYA+ G ++ +L+VF G+ EKD SWT+++ G NG ++AL+LF M
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKL 92
G PD + +VLSA + L+E G+++
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQV 452
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEA 60
+D V L+ MYAQ + ++ +F ++ EK+ +WTS++ G + NG KA+E F
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ G + + TF +VL+AC+ G ++ H K N+ ID+ +
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQV-HCCIVKSGFKTNIYVQSALIDMYAKCR 276
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLA 164
+ A L+ + + D+++ + +++ C G I GE L+
Sbjct: 277 EMESARALLEGM--EVDDVVS--WNSMIVGCVRQGLI--GEALS 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D +I Y+ S + + ++F K+T SW ++I G +G +A LF M+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ G KP++ T +VL C+ L+ G ++ H++ + + + N+ G + + +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNV--VNGLLAMYAQCKR 175
Query: 122 LHEAEELVRKLPDQTDEI 139
+ EAE L + + + +
Sbjct: 176 ISEAEYLFETMEGEKNNV 193
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D A+I+MY+ V+ +L+VF + E ++ + ++ NG +A++LF +
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G KP+ F V S C+ G V+EG F +M Y + P++EHY +L +G L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLA 164
EA V ++P + V ++ L++ R +G++++G+R A
Sbjct: 273 DEALNFVERMPMEPS---VDVWETLMNLSRVHGDVELGDRCA 311
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ET 63
VV +ALI MY++ G ++ + +F + K+ W +I G A NG + +A++LF + +
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Query: 64 LGAKPDDVTFIAVLSACSHAGL-VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
KPD TF+ +L+ CSH + +E F M + Y +KP++EH I +G+ G +
Sbjct: 416 RFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEV 475
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV--KXXXXXXXXX 180
+A++++++ D + +RALL AC ++ + +A + +
Sbjct: 476 WQAKQVIQEFGFGYDGVA---WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532
Query: 181 XXXIYASADRWEDV 194
+YA +RW +V
Sbjct: 533 MSNLYAYHERWREV 546
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+ +L++ Y S +E + +VF+ + + D SW S++ G +G+ + + LF +
Sbjct: 92 LSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSD 151
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
P++ +F A L+AC+ L G + + K N+ ID+ G+ G + +A
Sbjct: 152 VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA 211
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
LV + ++ D + + A++++C G +++G
Sbjct: 212 -VLVFQHMEEKDTVS---WNAIVASCSRNGKLELG 242
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VVG LI MY + G ++ ++ VF ++EKDT SW +I+ + NGK L F M
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM- 249
Query: 63 TLGAKPDDVTFIAVLSACSHAG 84
PD VT+ ++ A +G
Sbjct: 250 ---PNPDTVTYNELIDAFVKSG 268
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V LI + +SG + +V + + +++SW +I+ G + K+ +A E F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+ G + D+ + ++++ A A V L H+ + + + ID+ + G+L
Sbjct: 313 SSGVRFDEYS-LSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 123 HEAEELVRKLPDQT 136
AE + +P +
Sbjct: 372 KHAELMFWTMPRKN 385
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKP 68
+LI MYA+ G + ++ VF+ +KE+D S+ ++ A NG + L L M+ G +P
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEP 497
Query: 69 DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 116
D VT+ +VL+AC+ AGL++EG+++F S+ + P +HY +DLL
Sbjct: 498 DRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 33/197 (16%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
V A+I Y + G + + ++F+ + +++ SW S+I G A NG+ A+E FE M
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 65 G-AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G +KPD+VT I+VLSAC H +E G + + +K N Y I + R G L
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLW 450
Query: 124 EAEELVRKLPDQ----------------------------TDEIIVP---LYRALLSACR 152
EA+ + ++ ++ DE I P Y ++L+AC
Sbjct: 451 EAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN 510
Query: 153 TYGNIDMGERLATTLTN 169
G + G+R+ ++ N
Sbjct: 511 RAGLLKEGQRIFKSIRN 527
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D V T +I +A+ +E + + F+ + EK SW +++ G A NG T AL LF M
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
LG +P++ T++ V+SACS R L + ++ N +D+ + +
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK-RVRLNCFVKTALLDMHAKCRDI 315
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
A + +L Q + + + A++S G++ +L T+
Sbjct: 316 QSARRIFNELGTQRNLVT---WNAMISGYTRIGDMSSARQLFDTM 357
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
D VGT+L+ MYA+ G + +VF+G+ ++T +WTSII A G +A+ LF M+
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
+++T +++L AC G + G++L H+ ++ N+ + L + G
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKEL-HAQIIKNSIEKNVYIGSTLVWLYCKCGES 436
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
+A ++++LP + V + A++S C + G+
Sbjct: 437 RDAFNVLQQLPSRD----VVSWTAMISGCSSLGH 466
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ VG+ALI MYA+ G V ++ VF+ + EK+ SW ++I G A NG +AL+L ME
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Query: 63 TLGAKPDDVTFIAVLSAC 80
G + DD F +LS C
Sbjct: 580 AEGFEVDDYIFATILSTC 597
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 62
+ +G+ L+ +Y + G + V L +D SWT++I G + G ++AL+ + M
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +P+ T+ + L AC+++ + GR + HS++ H N+ I + + G +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 123 HEAEELVRKLPDQT 136
EA + +P++
Sbjct: 538 SEAFRVFDSMPEKN 551
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 64
+V ++L+ YAQ G + +L F+ ++EKD SWT++I + G KA+ +F M
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 65 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 124
P++ T ++L ACS + GR++ HS+ +K ++ +D+ + G + +
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 125 AEELVRKLPDQT 136
++ + ++
Sbjct: 338 CRKVFDGMSNRN 349
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+ + T LI+ Y G + + EVFN + + D ++ ++ GL NGK KAL +F
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M + VT+ ++ G VE+ LF S+ S MKPN+ Y I R
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCR 480
Query: 119 AGLLHEAEELVRKLPD 134
GL+HEA+ L +K+ +
Sbjct: 481 RGLIHEADSLFKKMKE 496
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFN-----GLKEKDTASWTSIICGLAMNGKTNKALEL 57
D V T+L+ Y +E ++ +F+ G K + ++T++I L N N A+EL
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP-NVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
F M T G++P+ VT+ A+++ G + L M ++PN+ + ID
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAFV 269
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
+ G L EA+EL + + V Y +L++ YG +D ++
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
+ + TALI + + G + ++ E++N + + D ++ S+I GL M G ++A ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 98
ME G P++V + ++ + VE+G K+F+ MS
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL-ELFEAME 62
+ALI Y +SG E+++ VFN +KE + ++ ++I G K + + F+ M+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 63 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
G +PD +TF ++L+ CS GL E R LF M++ ++ ++ Y +D + + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQM 390
Query: 123 HEAEELVRKLP 133
A E++ ++P
Sbjct: 391 DLAFEILAQMP 401
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALE 56
M + V + +I +A++G +++L +F ++ D S+ +++ G++ +AL+
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 57 LFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 116
+ M ++G K D VT+ A+L G +E +K+F M H+ PNL Y ID
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGY 524
Query: 117 GRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 150
+ GL EA E+ R+ V LY AL+ A
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V AL+ Y + G ++ +VF +K + + +++++I G + G +A+E+F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
++ G + D V + A++ A GLV L M+ + PN+ Y ID GR
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGR 596
Query: 119 AGLLHEAEE 127
+ + + +
Sbjct: 597 SATMDRSAD 605
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 39 TSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 98
+++I L GK A +FE G F A++SA +GL EE +F+SM
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 99 TYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP---LYRALLSACRTYG 155
Y ++PNL Y ID G+ G+ E +++ + + + P + +LL+ C G
Sbjct: 297 -YGLRPNLVTYNAVIDACGKGGM--EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 156 NIDMGERLATTLTNVK 171
+ L +TN +
Sbjct: 354 LWEAARNLFDEMTNRR 369
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFN----GLKEKDTASWTSIICGLAMNGKTNKALELFEAM 61
+ +A+I + G V + +F G +++++I +G +A+ +F +M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 62 ETLGAKPDDVTFIAVLSACSHAGL-VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
+ G +P+ VT+ AV+ AC G+ ++ K F M ++P+ + + + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGG 353
Query: 121 LLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDM 159
L A L ++ ++ E V Y LL A G +D+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNG--KTNKALELFE 59
V A++ +Y++SG K+ E+ + ++++ D S+ ++I +G N A+EL +
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
+ G +PD +T+ +LSACS ++ K+F M + + +P+L Y I + GR
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEA-HRCQPDLWTYNAMISVYGRC 345
Query: 120 GLLHEAEELVRKL 132
GL EAE L +L
Sbjct: 346 GLAAEAERLFMEL 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTS-----IICGLAMNGKTNKALEL 57
D +L+ YAQ GC E++ +FN + +D S T ++ L ++G+ + +
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMM-RDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
E ++ +G K + + +L A + AG + E +K++ SM + ++ P + Y I+LL
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL-PTIRLYRMMIELLC 903
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALL 148
+ + +AE +V ++ + ++ + ++ ++L
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
DAV +L+ +A+ EK EV+ +++ KD ++ +II G+ + AL+L+
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 59 EAMETL-GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
+ M+ L G PD +T+ ++ + A E L M +KP L+ Y I
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV-GIKPTLQTYSALICGYA 484
Query: 118 RAGLLHEAEE 127
+AG EAE+
Sbjct: 485 KAGKREEAED 494
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D V T+LI + +E+++ + N + E D +T+II L NG N AL LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ ME G +PD V + ++++ ++G + L M+ +KP++ + ID +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVK 259
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
G +AEEL ++ + + Y +L++ G +D ++
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E D ++TS+I G + + +A+ + M +G KPD V + ++ + G V
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 150
LF M + Y ++P++ Y ++ L +G +A+ L+R + + + V + AL+ A
Sbjct: 199 LFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELF 58
D + ALI + + G + E++N + A ++TS+I G M G ++A ++F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
MET G PD V + ++++ V++ K+F+ MS + N Y I G+
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQ 364
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTY 154
G + A+E+ + + + Y LL C Y
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH-CLCY 399
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTAS-----WTS--IICGLAMNGKTNKALELFEA 60
L+ +G V+K+L +F +++++ WT ++ GL NGK KAL +FE
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M +T+ ++ AG V+ LF S+ S +KPN+ Y I L R G
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREG 509
Query: 121 LLHEAEELVRKLPD 134
L HEA L RK+ +
Sbjct: 510 LKHEAHVLFRKMKE 523
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELF 58
+ V LI+ + Q+G V+K+ E F+ + D ++ ++ GL NG+ KAL +F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M+ D VT+ V+ G VEE LF S+ S +KP++ Y + L
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCT 482
Query: 119 AGLLHEAEELVRKLPDQ 135
GLLHE E L K+ +
Sbjct: 483 KGLLHEVEALYTKMKQE 499
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELF 58
+ + +AL+ + ++G V ++ E+F + + D +++S+I GL ++ + ++A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M + G D V++ +++ A VE+G KLF MS + N Y I +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQGFFQ 377
Query: 119 AGLLHEAEELVRKL 132
AG + +A+E ++
Sbjct: 378 AGDVDKAQEFFSQM 391
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 15 AQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDD 70
+G +EK+L +F ++++ D ++T++I G+ GK +A LF ++ G KPD
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 71 VTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 130
VT+ ++S GL+ E L+ M MK + G I L + EL++
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL---------SAELIK 521
Query: 131 KL 132
K+
Sbjct: 522 KM 523
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 25 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 84
E+ N E ++TS++ G GK NKAL L+ M G P TF +LS AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 85 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP-- 142
L+ + KLF+ M+ +++KPN Y I+ G + +A E ++++ T++ IVP
Sbjct: 522 LIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM---TEKGIVPDT 577
Query: 143 -LYRALL 148
YR L+
Sbjct: 578 YSYRPLI 584
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
DA + LI ++G ++ E+F +KE+ DT ++ +I G GK NKA +L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M+T G +P VT+ +V+ + ++E LF S ++ N+ Y ID G+
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGK 669
Query: 119 AGLLHEA----EELVRK 131
G + EA EEL++K
Sbjct: 670 VGRIDEAYLILEELMQK 686
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD----TASWTSIICGLAMNGKTNKALELF 58
D V T++I + ++ +++++E+F L++ T ++ ++I G GK ++A L
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E G+ P + + +L+ G V+E K+F M PNL Y ID+L R
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCR 389
Query: 119 AGLLHEAEEL 128
AG L A EL
Sbjct: 390 AGKLDTAFEL 399
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMET 63
T LI+ +A+ G V+ +L + + +K + D + I GK + A + F +E
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G KPD+VT+ +++ A ++E ++F + + P Y I G AG
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFD 325
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
EA L+ + + V Y +L+ R G +D
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 41/197 (20%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+ ++ +K++ +S +EKS ++F+ + E+ D A++T+II NG +A+E F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF---------------------HSMS 97
E M + G +PD+VT A++ A AG V+ L+ + +S
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 98 STYH-------------MKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 144
Y +KPNL Y ID +GRA +A+ + + D P +
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK---DLITNGFTPNW 350
Query: 145 RALLSACRTYGNIDMGE 161
+ R YG G+
Sbjct: 351 STYAALVRAYGRARYGD 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V A+I Y ++G V+ +L +++ + + D +++++I ++G + L ++
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M+ LG KP+ V + ++ + A + + ++ + T PN Y + GR
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGR 362
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
A +A + R++ ++ + V LY LLS C +D
Sbjct: 363 ARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVD 402
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAME-T 63
+LI+ Y +G ++S+++F +K+ ++ S++ L G+T A +LF+ M T
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
G PD TF +++ +V+E ++F M YH P++ Y ID L RAG
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM-ELYHCNPDVVTYNTIIDGLCRAG 258
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E +T +++++I GL + G+ ++ALEL + M +G KPD +T +++ +G E
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 151
L M Y +PN YG ++++ ++G A EL+RK+ ++ ++ Y ++
Sbjct: 215 LIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 152 RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI--YASADRWED 193
+G++D L + +K I + +A RW+D
Sbjct: 274 CKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDD 316
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+AV ++ + +SG ++E+ ++E+ D ++ II GL +G + A LF
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
ME G + +T+ ++ +AG ++G KL M + PN+ + ID +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVK 345
Query: 119 AGLLHEAEELVRKL 132
G L EAEEL +++
Sbjct: 346 EGKLREAEELHKEM 359
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V LI+ + + G + + E+F + + + ++ ++ GL NG++ KALE+F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E +E + D + ++ +A V++ LF S+ +KP ++ Y I L +
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGLCK 555
Query: 119 AGLLHEAEELVRKL 132
G L EAE L RK+
Sbjct: 556 KGPLSEAELLFRKM 569
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKALEL 57
D + T LI + + G VE +LE+ NG+ E D +++++CG+ G+ A
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGI-ELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
M G KPDDVT+ ++ A G + G KL M S H+ P++ Y ++ L
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLC 531
Query: 118 RAGLLHEAEELV 129
+ G + A+ L+
Sbjct: 532 KLGQMKNADMLL 543
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKALEL 57
+ V LIK Y Q+G ++ +L VF NGL + S+ ++ GL NG+ KAL
Sbjct: 222 NTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP-NIRSYNIVLAGLFANGEVEKALSR 280
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
FE M+ D +T+ ++ A +V+E LF+ + ++P+ + Y I L
Sbjct: 281 FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK-RVEPDFKAYTIMIAELN 339
Query: 118 RAGLLHEAEELVR 130
RAG+ EA+ L R
Sbjct: 340 RAGMRTEADALNR 352
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELF 58
D V AL+ +Y +S +++++V N + ++ S+I A +G ++A+EL
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G KPD T+ +LS AG VE +F M + KPN+ + FI + G
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGN 431
Query: 119 AGLLHE 124
G E
Sbjct: 432 RGKFTE 437
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEA 60
V +LI YA+ G +++++E+ N + EK D ++T+++ G GK A+ +FE
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G KP+ TF A + + G E K+F ++ + P++ + + + G+ G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC-GLSPDIVTWNTLLAVFGQNG 468
Query: 121 LLHEAEELVRKL 132
+ E + +++
Sbjct: 469 MDSEVSGVFKEM 480
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMET 63
A IKMY G + +++F+ + D +W +++ NG ++ +F+ M+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G P+ TF ++SA S G E+ ++ M + P+L Y + L R G+
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWE 541
Query: 124 EAEELVRKLPD 134
++E+++ ++ D
Sbjct: 542 QSEKVLAEMED 552
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALE 56
M+D V +I M + G V + +FNGL+E D S+TS+I A +G+ +A+
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 57 LFEAMETLGAKPDDVTFIAVLSACSHAGLV-EEGRKLFHSMSSTYHMKPNLEHYGGFIDL 115
+F+ ME G KP +T+ +L+ G + L M S + P+ Y I
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITC 288
Query: 116 LGRAGLLHEAEELVRKL 132
R L EA ++ ++
Sbjct: 289 CKRGSLHQEAAQVFEEM 305
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALE 56
M +A+ T +I Y ++G +++L++F +KE +T ++ +++ L ++N+ ++
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 57 LFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 116
+ M++ G P+ T+ +L+ C + G+ + ++F M S +P+ + + I
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC-GFEPDRDTFNTLISAY 501
Query: 117 GRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
GR G +A ++ ++ V Y ALL+A G+ GE + + +
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKT-NKAL 55
++D T ++ Y+++G EK++++F +KE + ++ I+ G++ K L
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKIL 266
Query: 56 ELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDL 115
+ + M + G K D+ T VLSAC+ GL+ E ++ F + S + +P Y + +
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY-EPGTVTYNALLQV 325
Query: 116 LGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 150
G+AG+ EA +++++ + + Y L++A
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 5 VVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEA 60
V AL++++ ++G ++L V ++E D+ ++ ++ G + +A + E
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 61 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 120
M G P+ +T+ V+ A AG +E KLF+SM + PN Y + LLG+
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKS 435
Query: 121 LLHEAEELVRKLPDQTDEIIVP---LYRALLSACRTYG 155
+ E+++ L D P + +L+ C G
Sbjct: 436 ---RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 34 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 93
D S++S+I + G NK L+LF+ M+ +PD + AV+ A + A V E R L
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 94 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 153
+M ++PN+ Y I L +A EA+++ ++ ++ + Y A + RT
Sbjct: 361 KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT 420
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALE 56
+ D T ++ + ++G +E++ + FN ++E + ++T++I K + A E
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 57 LFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHM-------------- 102
LFE M + G P+ VT+ A++ AG VE+ ++F M + +
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 103 -KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGE 161
+PN+ YG +D ++ + EA +L+ + + E +Y AL+ G +D +
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 162 RLATTLT 168
+ T ++
Sbjct: 695 EVKTEMS 701
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+ V TALI Y ++ V + E+F + + + +++++I G G+ KA ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 59 EAM----------------ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHM 102
E M + +P+ VT+ A+L + VEE RKL +MS
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GC 670
Query: 103 KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALL 148
+PN Y ID L + G L EA+E+ ++ + + Y +L+
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELF 58
D V LI Y+ G +E++ E+ N + K + ++ ++I GL +GK +A E+F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G PD T+ ++L G V E K+F M S + P+L + + L R
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTR 387
Query: 119 AGLLHEA 125
+G L +A
Sbjct: 388 SGNLDKA 394
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D V ++++ ++ +SG ++K+L FN +KE D +T +I G G + A+ L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G D VT+ +L ++ E KLF+ M+ + P+ ID +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-ALFPDSYTLTILIDGHCK 492
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
G L A EL +K+ ++ + V Y LL G+ID + +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELF 58
D V ++ + G VE ++E+ N L K + ++ ++I GLA GKT KA++L
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN 105
+ M KPD +T+ +++ S G V+E K FH ++PN
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER-MGIRPN 518
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKD----TASWTSIICGLAMNGKTNKALELFEAMET 63
+I A++G K++++ + ++ KD T +++S++ GL+ GK ++A++ F E
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+G +P+ VTF +++ + + M + KPN Y I+ L G+
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAK 571
Query: 124 EAEELVRKLPDQ 135
EA EL+ +L ++
Sbjct: 572 EALELLNELCNK 583
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLG 65
LI + G + +++++ + + ++ S+ ++ G K ++A+E E M + G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
PD VT+ +L+A G VE+ ++ + +SS P L Y ID L +AG +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 126 EELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+L+ ++ + + Y +L+ G +D
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 34 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 93
D T++I G GKT KA ++ E +E GA PD +T+ ++S AG + +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 94 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA-CR 152
MS + P++ Y + L +G L +A E++ ++ + V Y L+ A CR
Sbjct: 196 DRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 153 TYG 155
G
Sbjct: 252 DSG 254
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVF-NGLKEK----DTASWTSIICGLAMNGKTNKALEL 57
+ V+ +I + G K+ E+ N +KEK S+ SII G G T+ A+E
Sbjct: 553 NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVET 612
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
+ M G P+ VTF ++++ + ++ ++ H M S +K +L YG ID
Sbjct: 613 YREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM-ELKLDLPAYGALIDGFC 671
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 169
+ + A L +LP+ V +Y +L+S R G +D L + N
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D V T LI+ G + + +VF + D +++ ++ GL NGK KALE+F
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M+ K D + ++ AG V++G LF S+ S +KPN+ Y I L
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCS 552
Query: 119 AGLLHEAEELVRKLPD 134
LL EA L++K+ +
Sbjct: 553 KRLLQEAYALLKKMKE 568
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E D + +II L + AL LF+ MET G +P+ VT+ +++S G + +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 151
L M + PNL + ID + G EAE+L + ++ + + Y +L++
Sbjct: 317 LLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 152 RTYGNIDMGERL 163
+ +D +++
Sbjct: 376 CMHDRLDKAKQM 387
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD----TASWTSIICGLAMNGKTNKALELF 58
D +L+ + ++K+ ++F + KD ++ ++I G + + ELF
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G D VT+ ++ H G + +K+F M S + P++ Y +D L
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCN 482
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 168
G L +A E+ + ++ + +Y ++ G +D G L +L+
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D V T LI+ G + + +VF + D +++ ++ GL NGK KALE+F
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M+ K D + ++ AG V++G LF S+ S +KPN+ Y I L
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCS 477
Query: 119 AGLLHEAEELVRKLPD 134
LL EA L++K+ +
Sbjct: 478 KRLLQEAYALLKKMKE 493
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E D + +II L + AL LF+ MET G +P+ VT+ +++S G + +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 151
L M + PNL + ID + G EAE+L + ++ + + Y +L++
Sbjct: 242 LLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 152 RTYGNIDMGERL 163
+ +D +++
Sbjct: 301 CMHDRLDKAKQM 312
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDT----ASWTSIICGLAMNGKTNKALELF 58
D +LI + ++K+ ++F + KD ++ ++I G + + ELF
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G D VT+ ++ H G + +K+F M S + P++ Y +D L
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCN 407
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 168
G L +A E+ + ++ + +Y ++ G +D G L +L+
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V +ALI ++ + G + ++ E++N + + DT ++ S+I G ++A ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M + G +PD VT+ ++++ A V++G +LF +SS + PN Y + +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQ 432
Query: 119 AGLLHEAEELVRKL 132
+G L+ A+EL +++
Sbjct: 433 SGKLNAAKELFQEM 446
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMET 63
+ +I + G + +L +FN ++ K D +++S+I GL +GK + ++ M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
PD VTF A++ G + E ++L++ M T + P+ Y ID + LH
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-ITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
EA ++ + + E + Y L+++ +D G RL
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+ + L+ + QSG + + E+F + + ++ ++ GL NG+ NKALE+F
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 59 EAME----TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFID 114
E M+ TLG + ++ +A V++ LF S+S +KP++ Y I
Sbjct: 479 EKMQKSRMTLGIG----IYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIG 533
Query: 115 LLGRAGLLHEAEELVRKLPD 134
L + G L EA+ L RK+ +
Sbjct: 534 GLCKKGSLSEADMLFRKMKE 553
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D + + L+ + G V +++ + + + E D + +++I GL + G+ ++AL L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M G +PD+VT+ VL+ +G LF M ++K ++ Y ID L +
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCK 257
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
G +A L ++ + + V Y +L+ G D G ++
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALEL 57
V + V +IK + + G + +++++FN +K + D ++ +++ G+ G N+A L
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
ME G + D + +L+ + G+ ++F ++ + +KP+ Y +
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS-GIKPDGVTYNTLLGCFA 595
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
AG+ EA ++R++ D+ E Y ++L A GN+D
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVD 633
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE---KDTASWTSIICGLAMN-GKTNKALELF 58
D + +ALI Y + G + ++ +F+ +K+ + T + + G+ GK KAL+LF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M+ G P T+ ++ AG V+E + M + P++ +++LG+
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGK 350
Query: 119 AGLLHE 124
G + E
Sbjct: 351 VGRVEE 356
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD----TASWTSIICGLAMNGKTNKALELF 58
D ALI + + ++ + V + ++ KD T ++ +I L GK + AL++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ + +P +T+ ++ A G V+E KL M S +KP++ Y I + +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCK 275
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 171
G++ A E+VR L + E V Y LL A G + GE+L T + + K
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 4 AVVGTALIKMYAQSGCVEKSLEVFN-----GLKEKDTASWTSIICGLAMNGKTNKALELF 58
+ T LI+ G V+++L++ + GLK D ++ +II G+ G ++A E+
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLK-PDMFTYNTIIRGMCKEGMVDRAFEMV 286
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+E G +PD +++ +L A + G EEG KL M S PN+ Y I L R
Sbjct: 287 RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCR 345
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG-ERLATTLTN 169
G + EA L++ + ++ Y L++A G +D+ E L T +++
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLG 65
++ + +SG ++E+ ++E+ D ++ II GL +G + A LF ME G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
K D +T+ ++ +AG ++G KL M + PN+ + ID + G L EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREA 352
Query: 126 EELVRKL 132
++L++++
Sbjct: 353 DQLLKEM 359
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E DT + +++ GL + + ++ALEL + M +G KP +T +++ G V +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 151
L M T +PN YG ++++ ++G A EL+RK+ ++ ++ Y ++
Sbjct: 215 LIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 152 RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI--YASADRWED 193
G++D L + +K I + +A RW+D
Sbjct: 274 CKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDD 316
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMET 63
++ Y G E+++EVF + + DT S+ +++ L N +A +L+ ME
Sbjct: 354 NVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEE 413
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
KPD+ T+ ++ C G ++EG + +M + +++PNL Y D L +AG L
Sbjct: 414 KNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVES-NLRPNLAVYNRLQDQLIKAGKLD 472
Query: 124 EAEE----LVRKLPDQTDEIIVPLYRALLSACR 152
+A+ +V KL DE + RAL A R
Sbjct: 473 DAKSFFDMMVSKL-KMDDEAYKFIMRALSEAGR 504
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK---DTASWTSIICGLAMNGKTNKALELFE 59
D V L+ ++G V+++ +VF ++EK + +TS++ G GK +A E+
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 60 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 119
M+ G +PD V F +LS +HAG + + L + M +PN+ Y I L R
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR-GFEPNVNCYTVLIQALCRT 319
Query: 120 -GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
+ EA + ++ E + Y AL+S +G ID G
Sbjct: 320 EKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALE 56
+ D L++ YA+SG +++++ VF+ ++ + +++ ++ +G+ + +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 57 LFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 116
LF M++ PD T+ ++ G +E LFH M +++P++E Y G I
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFAC 432
Query: 117 GRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 155
G+ GL +A ++++ + T IVP +A +G
Sbjct: 433 GKGGLHEDARKILQYM---TANDIVPSSKAYTGVIEAFG 468
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMET 63
T +I + + G ++K LEVF+ + + + S+T++I NG+ +LEL + M+
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEG-RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 122
P +T+ V++AC+ GL EG LF M ++P++ Y + GL
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGLG 263
Query: 123 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 167
EAE + R + D IVP T+G + E++ L
Sbjct: 264 DEAEMVFRTMNDGG---IVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 8 TALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMET 63
+ L+ ++ QSG + ++F +K + D A++ +I G + + LF M
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
+PD T+ ++ AC GL E+ RK+ M++ + P+ + Y G I+ G+A L
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYE 474
Query: 124 EA 125
EA
Sbjct: 475 EA 476
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 9 ALIKMYAQSGCVEKSLEVFNGLKEK-----DTASWTSIICGLAMNGKTNKALELFEAMET 63
AL+ Y S ++++++ F L EK D ++ ++I L G + L +FE +E
Sbjct: 162 ALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEK 221
Query: 64 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 123
G +PD ++F +L L EG +++ M S ++ PN+ Y + L R
Sbjct: 222 NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK-NLSPNIRSYNSRVRGLTRNKKFT 280
Query: 124 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
+A L+ + + V Y AL++A R N++
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
+AV + L++ + QSG ++ + E+F + D ++ ++ GL NGK KALE+F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E ++ V + ++ G VE+ LF S+ +KPN+ Y I L +
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCK 520
Query: 119 AGLLHEAEELVRKLPD 134
G L EA L+RK+ +
Sbjct: 521 KGSLSEANILLRKMEE 536
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V +++ +SG +L++ ++E+ D ++++II L +G + A+ LF
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ MET G K VT+ +++ AG +G L M S + PN+ + +D+ +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVK 310
Query: 119 AGLLHEAEELVRKL 132
G L EA EL +++
Sbjct: 311 EGKLQEANELYKEM 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V T+LIK Y V+ ++VF + ++ + +++ ++ G +GK A ELF
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M + G PD +T+ +L G +E+ ++F + + M + Y I+ + +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVMYTTIIEGMCK 485
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 150
G + +A L LP + + V Y ++S
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E DT ++ ++I GL + GK ++A+ L + M G +PD VT+ ++++ +G
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALL 148
L M ++K ++ Y ID L R G + A L +++ + + V Y +L+
Sbjct: 215 LLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V TALI ++ + G ++++ E++ + + + ++ SII GL M+G+ A + F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMS 97
+ M + G P+ VT+ ++S +V+EG KLF MS
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E + + ++I GL NG+ N ALEL ME G D VT+ +L+ ++G + +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 132
+ M + P++ + ID+ + G L EA+EL +++
Sbjct: 233 MLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
E DT +++++I GL + G+ ++ALEL + M +G KP +T A+++ G V +
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 151
L M T +PN YG + ++ ++G A EL+RK+ ++ ++ Y ++
Sbjct: 199 LIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 152 RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI--YASADRWED 193
G++D L + +K I + A RW+D
Sbjct: 258 CKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDD 300
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V LI+ + + G +E + E+F + + D S+ ++ GL NG+ KALE+F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E +E + D + ++ +A V++ LF S+ +KP+++ Y I L +
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCK 539
Query: 119 AGLLHEAEELVRKLPD 134
G L EA+ L RK+ +
Sbjct: 540 KGSLSEADLLFRKMEE 555
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V +ALI + + G + ++ E+ + ++ DT ++TS+I G + +KA +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M + G P+ TF +++ A L+++G +LF M S + + Y I
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCE 434
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 150
G L A+EL +++ + + Y+ LL
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 1 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-----DTASWTSIICGLAMNGKTNKAL 55
++D+ +GT+L+ + + + +L+VF+ + ++ ++ S++ +I GL G+ +A
Sbjct: 227 VLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAF 286
Query: 56 ELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDL 115
L + M G +P T+ ++ A GL+++ LF M KPN+ Y ID
Sbjct: 287 GLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR-GCKPNVHTYTVLIDG 345
Query: 116 LGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 150
L R G + EA + RK+ V Y AL++
Sbjct: 346 LCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELF 58
D VV T LI + + G + + + F + +D ++T+II G G +A +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G +PD VTF +++ AG +++ ++ + M PN+ Y ID L +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCK 468
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLA 164
G L A EL+ ++ + + Y ++++ GNI+ +L
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D+V T LI Y ++G ++ + V N + + + ++T++I GL G + A EL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M +G +P+ T+ ++++ +G +EE KL + + + Y +D +
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCK 538
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
+G + +A+E+++++ + + + + L++ +G ++ GE+L
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELF 58
D VV T LI + + G + + + F + +D ++T+II G G +A +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G +PD VTF +++ AG +++ ++ + M PN+ Y ID L +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCK 468
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLA 164
G L A EL+ ++ + + Y ++++ GNI+ +L
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
D+V T LI Y ++G ++ + V N + + + ++T++I GL G + A EL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M +G +P+ T+ ++++ +G +EE KL + + + Y +D +
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCK 538
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 163
+G + +A+E+++++ + + + + L++ +G ++ GE+L
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
+ V T LI + Q+ + + VF + D +++ ++ GL NGK AL +F
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E ++ +PD T+ ++ AG VE+G LF S+ S +KPN+ Y + R
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCR 548
Query: 119 AGLLHEAEELVRKLPDQ 135
GL EA+ L R++ ++
Sbjct: 549 KGLKEEADALFREMKEE 565
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 58
+ V LI+ Q+G + + ++F + D +++ ++ GL GK KAL +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E ++ +PD T+ ++ AG VE+G LF S+S +KPN+ Y I R
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCR 547
Query: 119 AGLLHEAEELVRKLPD 134
GL EA+ L R++ +
Sbjct: 548 KGLKEEADALFREMKE 563
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+ V +ALI + + G + ++ ++++ + ++ D +++S+I G M+ + ++A +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M + P+ VT+ ++ A VEEG +LF MS + N Y I L +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQ 442
Query: 119 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 158
AG A+++ +K+ + Y LL YG ++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 29 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEE 88
G E D +T+II L N AL LF M+ G +P+ VT+ +++ + G +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 89 GRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALL 148
+L M + PN+ + ID + G L EAE+L ++ ++ + + Y +L+
Sbjct: 309 ASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 149 SACRTYGNID 158
+ + +D
Sbjct: 368 NGFCMHDRLD 377
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELF 58
D + T LI A+SG V+ EVF+ + E + ++ ++I G A G+ KA +
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYH-MKPNLEHYGGFIDLLG 117
+ + KPD V F A++SAC +G V+ + M + H + P+ G +
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 118 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
AG + A+E+ + + +Y +++C G+ D
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFA 663
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 15 AQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDD 70
+ G + + VF + K + A +T +I G A +G A+ L M G KPD
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 71 VTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 130
VT+ V++ G VEE FH+ + N Y ID LG+AG + EAE L
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 131 KLPDQTDEIIVPLYRALLSACRTYGNID 158
++ ++ Y AL+ A + +D
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 37 SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 96
+++ +I GL GK N+ +FE M G+KP+ + ++ + +G VE+ +L H M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 97 SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 156
KP++ Y ++ L + G + EA + I Y +L+ G
Sbjct: 389 IDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 157 IDMGERL 163
+D ERL
Sbjct: 448 VDEAERL 454
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 32 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 91
+ D +T +I GL+ GK AL+L +M + G PD + AV+ A GL+EEGR
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 92 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA- 150
L MS T P+ + I + R GL+ EAEE+ ++ V + AL+
Sbjct: 395 LQLEMSETESF-PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 151 CRT 153
C++
Sbjct: 454 CKS 456
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 41/169 (24%)
Query: 2 VDAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSII--------------- 42
VD+ LI YA+ G EK++E F +KE D ++ I+
Sbjct: 125 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFA 184
Query: 43 ---------C------------GLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 81
C GL G+T+ A ++F+ M G P+ VT+ ++S
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 82 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 130
G ++ RKLF+ M ++ + ++ H +D + G + EA EL+R
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAH-NALLDGFCKLGRMVEAFELLR 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD-----TASWTSIICGLAMNGKTNKALEL 57
D+V AL+ + + G + ++ E+ L EKD ++S+I GL + +A EL
Sbjct: 267 DSVAHNALLDGFCKLGRMVEAFELLR-LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 58 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 117
+ M KPD + + ++ S AG +E+ KL SM S + P+ Y I L
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIKALC 384
Query: 118 RAGLLHEAEEL------VRKLPDQTDEIIVPLYRALLSACRT 153
GLL E L PD I+ + S CR
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTIL-----ICSMCRN 421
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D T ++ ++ ++G ++ VF+ +KEK DT ++TS+I ++ +G + A+ L+
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
E M G +P V++ A + G VEE +++ M + + PN Y ++ L
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS-RVSPNCHTYTVLMEYLVA 239
Query: 119 AGLLHEAEELVRKLPD 134
G EA ++ K+ +
Sbjct: 240 TGKCEEALDIFFKMQE 255
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAM 61
D + +I+ Y Q+G + + E+F+ + + + +++ ++ GL MN + KAL LFE M
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
+ + D T+ V+ G VE+ LF S+S +KP++ Y I R
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQ 466
Query: 122 LHEAEELVRKLPD 134
+++ L RK+ +
Sbjct: 467 WDKSDLLYRKMQE 479
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
+ + TA+I ++ + G ++++++ + + D ++ S+I GL M+G+ ++A ++
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
+ M T G PD VT+ +++ + V+EG KLF M+ + + Y I +
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQ 361
Query: 119 AGLLHEAEELVRKLPDQTD 137
AG A+E+ ++ + +
Sbjct: 362 AGRPDAAQEIFSRMDSRPN 380
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D V+ +I + G V ++E+F+ ++ D ++ S++ GL +G+ + A L
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M P+ +TF AV+ G E KL+ M+ + P++ Y I+ L
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCM 291
Query: 119 AGLLHEAEELV 129
G + EA++++
Sbjct: 292 HGRVDEAKQML 302
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 10 LIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLG 65
+I + G VE + +F +K + DT ++ S+I G G+ + + FE M+ +
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 66 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 125
+PD +T+ A+++ G + G + + M +KPN+ Y +D + G++ +A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGN-GLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 126 EELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGERLATTLTNV 170
++ D +VP Y +L+ A GN+ RL + V
Sbjct: 387 ---IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 6 VGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAM 61
V AL + G +E++++ F+ +K T S ++ A GKT+ F+ M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 62 ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 121
GA+P T+ ++ G VE R LF M + P+ Y ID G+ G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR-GLVPDTVTYNSMIDGFGKVGR 312
Query: 122 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 160
L + ++ D E V Y AL++ +G + +G
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 3 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 58
D + +IK Y ++ EK+L +F G+K + D ++ S+ LA ++A +
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 59 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 118
M G KP T+ A++++ GL+ + L+ +M T +KPN YG I+
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT-GVKPNEVVYGSLINGFAE 632
Query: 119 AGLLHEAEELVRKLPD---QTDEIIVPLYRALLSACRTYGNIDMGERL 163
+G++ EA + R + + Q++ I++ +L+ A G ++ R+
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVL---TSLIKAYSKVGCLEEARRV 677