Miyakogusa Predicted Gene

Lj0g3v0339429.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0339429.2 Non Chatacterized Hit- tr|I3T4A5|I3T4A5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.52,0,seg,NULL;
PTPLA,Protein-tyrosine phosphatase-like, PTPLA; SUBFAMILY NOT
NAMED,NULL; PTPLA DOMAIN PRO,CUFF.23280.2
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10480.1 | Symbols: PAS2, PEP | Protein-tyrosine phosphatase-...   290   6e-79
AT5G10480.3 | Symbols: PAS2 | Protein-tyrosine phosphatase-like,...   282   1e-76
AT5G10480.2 | Symbols: PAS2, PEP | Protein-tyrosine phosphatase-...   270   7e-73
AT5G59770.1 | Symbols:  | Protein-tyrosine phosphatase-like, PTP...    75   2e-14

>AT5G10480.1 | Symbols: PAS2, PEP | Protein-tyrosine
           phosphatase-like, PTPLA | chr5:3298047-3300048 REVERSE
           LENGTH=221
          Length = 221

 Score =  290 bits (741), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 144/209 (68%), Positives = 159/209 (76%)

Query: 1   MAGFXXXXXXXXXXXXNWTVFFGWVQVLYLVLKTLKESGHEHVYSAAEKPLILAQTAAVL 60
           MAGF            NW VF GW QVLYL + TLKE+G+E+VY A EKPL LAQTAAVL
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLVGLVRSPITATLPQISSRLFLVWGILWSFPETRTHXXXXXXXXXXXXTEIIRYL 120
           EILHGLVGLVRSP++ATLPQI SRLFL WGIL+SFPE R+H            TEIIRY 
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYS 120

Query: 121 FFGFKEAFGFAPSWLLWLRYSTFLVLYPTGISSEVGLIYIVLPFIKASEKYCIRMPNTWN 180
           FFGFKEA GFAPSW LWLRYS+FL+LYPTGI+SEVGLIY+ LP IK SE Y +RMPN  N
Sbjct: 121 FFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILN 180

Query: 181 SSFDYFYAAIVSLGIYVPGSPHMYRYMLA 209
            SFD+FYA I+ L IYVPGSPHMYRYML 
Sbjct: 181 FSFDFFYATILVLAIYVPGSPHMYRYMLG 209


>AT5G10480.3 | Symbols: PAS2 | Protein-tyrosine phosphatase-like,
           PTPLA | chr5:3298047-3300048 REVERSE LENGTH=230
          Length = 230

 Score =  282 bits (721), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 144/218 (66%), Positives = 159/218 (72%), Gaps = 9/218 (4%)

Query: 1   MAGFXXXXXXXXXXXXNWTVFFGWVQVLYLVLKTLKESGHEHVYSAAEKPLILAQTAAVL 60
           MAGF            NW VF GW QVLYL + TLKE+G+E+VY A EKPL LAQTAAVL
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLVGLVRSPITATLPQISSRLFLVWGILWSFPETRTHXXXXXXXXXXXXTE----- 115
           EILHGLVGLVRSP++ATLPQI SRLFL WGIL+SFPE R+H            TE     
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITT 120

Query: 116 ----IIRYLFFGFKEAFGFAPSWLLWLRYSTFLVLYPTGISSEVGLIYIVLPFIKASEKY 171
               IIRY FFGFKEA GFAPSW LWLRYS+FL+LYPTGI+SEVGLIY+ LP IK SE Y
Sbjct: 121 WIVEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMY 180

Query: 172 CIRMPNTWNSSFDYFYAAIVSLGIYVPGSPHMYRYMLA 209
            +RMPN  N SFD+FYA I+ L IYVPGSPHMYRYML 
Sbjct: 181 SVRMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLG 218


>AT5G10480.2 | Symbols: PAS2, PEP | Protein-tyrosine
           phosphatase-like, PTPLA | chr5:3298047-3299980 REVERSE
           LENGTH=196
          Length = 196

 Score =  270 bits (689), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 133/183 (72%), Positives = 148/183 (80%)

Query: 27  VLYLVLKTLKESGHEHVYSAAEKPLILAQTAAVLEILHGLVGLVRSPITATLPQISSRLF 86
           VLYL + TLKE+G+E+VY A EKPL LAQTAAVLEILHGLVGLVRSP++ATLPQI SRLF
Sbjct: 2   VLYLAITTLKETGYENVYDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLF 61

Query: 87  LVWGILWSFPETRTHXXXXXXXXXXXXTEIIRYLFFGFKEAFGFAPSWLLWLRYSTFLVL 146
           L WGIL+SFPE R+H            TEIIRY FFGFKEA GFAPSW LWLRYS+FL+L
Sbjct: 62  LTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLL 121

Query: 147 YPTGISSEVGLIYIVLPFIKASEKYCIRMPNTWNSSFDYFYAAIVSLGIYVPGSPHMYRY 206
           YPTGI+SEVGLIY+ LP IK SE Y +RMPN  N SFD+FYA I+ L IYVPGSPHMYRY
Sbjct: 122 YPTGITSEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVPGSPHMYRY 181

Query: 207 MLA 209
           ML 
Sbjct: 182 MLG 184


>AT5G59770.1 | Symbols:  | Protein-tyrosine phosphatase-like, PTPLA
           | chr5:24079521-24081195 REVERSE LENGTH=272
          Length = 272

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)

Query: 44  YSAAEKPLILAQTAAVLEILHGLVGLVRSPITATLPQISSRLFLVWGILWSFPETRTHXX 103
           Y++A   + L QTAA+LE+LHG +G+V S   + L Q S R   +  I+    E +    
Sbjct: 92  YASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSGRTHFILAIVGQIKEVQDSPW 151

Query: 104 XXXXXXXXXXTEIIRYLFFGFKEAFGFAPSWLLWLRYSTFLVLYPTGISSEVGLIYIVLP 163
                      E+IRY  + F    G  P WL +LRY+ F+V+YPTG+  E+ ++Y  LP
Sbjct: 152 LSITLVAWCIGEMIRYPHYAF-TCLGRCPYWLTYLRYTGFIVIYPTGLVGELLIMYKALP 210

Query: 164 FIKASEKY 171
           ++K    Y
Sbjct: 211 YVKERNLY 218