Miyakogusa Predicted Gene
- Lj0g3v0339169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0339169.1 tr|B0BLI6|B0BLI6_LOTJA CM0216.400.nc protein
OS=Lotus japonicus GN=CM0216.400.nc PE=4 SV=1,50.56,3e-17,seg,NULL; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Pe,CUFF.23202.1
(349 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 | chr1:2984284... 74 2e-13
AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 | chr1:2983398... 73 3e-13
AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5... 65 7e-11
AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 | chr1:2983668... 62 7e-10
AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893... 61 1e-09
AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 | chr1:5612304... 54 1e-07
>AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 |
chr1:29842849-29844368 FORWARD LENGTH=418
Length = 418
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 17/139 (12%)
Query: 95 KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQPTE 154
KKAVLIG+ +P + + RM L+ GFSE+NIT++I ++ QPT
Sbjct: 3 KKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDE---SSTQPTG 59
Query: 155 INIRVKLCRLVDRADPGDILFVHLIAYGCS-------------DGVIITSDQDHIPDSYF 201
NIR L LV+ AD GD+L VH +G D I+ D + I D F
Sbjct: 60 KNIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDF 119
Query: 202 RALIWNAGKKGCDLTFVSD 220
R L+ GC +T +SD
Sbjct: 120 RDLVDKV-PPGCRMTIISD 137
>AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 |
chr1:29833986-29835412 FORWARD LENGTH=403
Length = 403
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 95 KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMI-QDEQHEDHENQPT 153
K+A+LIG+ +P + RM L++ GF+E++IT++I DE + QPT
Sbjct: 3 KRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESY----TQPT 58
Query: 154 EINIRVKLCRLVDRADPGDILFVHLIAYGCS-------------DGVIITSDQDHIPDSY 200
NIR L L+ A GD+LFVH +G D I+ SD + IPD
Sbjct: 59 GKNIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLNPIPDDD 118
Query: 201 FRALIWNAGKKGCDLTFVSD 220
FR L+ +GC +T VSD
Sbjct: 119 FRDLVEQV-PEGCQITIVSD 137
>AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5 |
chr1:29838722-29840137 FORWARD LENGTH=410
Length = 410
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 95 KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQPTE 154
KKAVLIG+ +P + + R+ L++ GFSE NIT +I ++ +PT
Sbjct: 3 KKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESS---TKPTG 59
Query: 155 INIRVKLCRLVDRADPGDILFVHLIAYGCS-------------DGVIITSDQDHIPDSYF 201
NIR L LV+ A PGD+L VH +G D I+ D + I D F
Sbjct: 60 KNIRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLITDDEF 119
Query: 202 RALIWNAGKKGCDLTFVSD 220
R L+ K+ +T +SD
Sbjct: 120 RDLVEKVPKE-AHITIISD 137
>AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 |
chr1:29836686-29837908 FORWARD LENGTH=368
Length = 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 17/139 (12%)
Query: 95 KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQPTE 154
KKA+LIG+ + + + RM+ L+ GFSE+NI ++I + +PT
Sbjct: 3 KKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSS---IKPTG 59
Query: 155 INIRVKLCRLVDRADPGDILFVHLIAYGCS-------------DGVIITSDQDHIPDSYF 201
NIR L LV+ A GD+LFVH +G D I+ SD + I D F
Sbjct: 60 KNIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDF 119
Query: 202 RALIWNAGKKGCDLTFVSD 220
R L+ + K C +T +SD
Sbjct: 120 RDLV-DMVPKDCPITIISD 137
>AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 |
chr5:1153893-1154870 FORWARD LENGTH=325
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 93 KEKKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQP 152
K++ AVL+G +P+ + +L MK+ +++ GF +D+I ++ + + + +P
Sbjct: 8 KKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPE---SKVKP 64
Query: 153 TEINIRVKLCRLVDRADP--GDILFVHLIAYGC------------SDGVIITSDQDHIPD 198
T NI+ L R+VD+A GDILF H +G D I+ D + I D
Sbjct: 65 TGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDEAIVPCDFNLITD 124
Query: 199 SYFRALIWNAGKKGCDLTFVSDCL------------IAPHKCTCPITPFVSAT 239
FR L+ N KG T +SD I P + I+P + T
Sbjct: 125 VDFRELV-NQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSSVSSNISPAIETT 176
>AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 |
chr1:5612304-5613829 REVERSE LENGTH=381
Length = 381
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 95 KKAVLIGLKHPDPQMNDIDVKEQILRMKDLLINHRGFSEDNITLMIQDEQHEDHENQPTE 154
KKA+LIG+ +P + + RM+ LI GF+ +I +MI ++ QPT
Sbjct: 3 KKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDK---SCIQPTG 59
Query: 155 INIRVKLCRLVDRADPGDILFVHLIAYGCS--------------DGVIITSDQDHIPDSY 200
NI +L L+ GD L H +G D I D + I D
Sbjct: 60 KNICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQ 119
Query: 201 FRALIWNAGKKGCDLTFVSD 220
FR ++ K+GC LT +SD
Sbjct: 120 FREMVSRV-KEGCQLTIISD 138