Miyakogusa Predicted Gene

Lj0g3v0338909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0338909.1 Non Chatacterized Hit- tr|I1JCA6|I1JCA6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.42,0,Ubiquitin
homologues,Ubiquitin; Heat shock chaperonin-binding motif.,Heat shock
chaperonin-binding; ,CUFF.23203.1
         (580 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17200.1 | Symbols: DSK2 | ubiquitin family protein | chr2:74...   329   4e-90
AT2G17190.1 | Symbols:  | ubiquitin family protein | chr2:747827...   317   1e-86
AT5G42220.1 | Symbols:  | Ubiquitin-like superfamily protein | c...    69   8e-12
AT5G25270.1 | Symbols:  | Ubiquitin-like superfamily protein | c...    59   9e-09
AT5G11080.1 | Symbols:  | Ubiquitin-like superfamily protein | c...    52   1e-06

>AT2G17200.1 | Symbols: DSK2 | ubiquitin family protein |
           chr2:7482133-7485090 REVERSE LENGTH=551
          Length = 551

 Score =  329 bits (843), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 209/404 (51%), Positives = 254/404 (62%), Gaps = 29/404 (7%)

Query: 194 QMQQPFISNPNLVREIMNTPAMQNLINNPEIVRNLIMSNPQMQELMDRNPELAHILNDPS 253
           Q QQ    NPN++R++MNTPA+QNL+NNPE +R++IM+NPQM+EL+DRNPEL H+LNDPS
Sbjct: 159 QTQQQLAQNPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPS 218

Query: 254 TLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLXXXXXXXXX 313
            LRQTLEA RNPE+MREMMRNTDRAMSNIES PEGFNMLRRMYENVQEP +         
Sbjct: 219 ILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSGNA 278

Query: 314 XXXX-----XXISGTQG--GQVRDQSTNPSTANSETTGGSPVPNTNPLPNPWSSTRTGPA 366
                      + G QG   Q  D S N ST N+   G   +PN NPLPNPW +T     
Sbjct: 279 GNNTGSNPFAALLGNQGVTTQGSDASNNSSTPNA---GTGTIPNANPLPNPWGATGGQTT 335

Query: 367 PPNNTRRSTAGGDTRQ---------QTPTGLGGLGMPDLEGMLGGSGMPDAASLAQLMQN 417
            P    R+  GGD R           +  GLGGLGM   +  LG +  PDA+ L+QL+QN
Sbjct: 336 APG---RTNVGGDARSPGLGGLGGLGSLGGLGGLGMLGADSPLGAT--PDASQLSQLLQN 390

Query: 418 PAISQMMQSILSNPQTLNQILGTNTEQRGMPDLN-SLREVMRNPEFLRMFSSPXXXXXXX 476
           PAISQMMQS+ SNPQ +NQ++  N + R M D N  LRE+M+NP+FLR FSSP       
Sbjct: 391 PAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMMQNPDFLRQFSSP----EMM 446

Query: 477 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLSSMFGGLGAGSLAVPNRSNEAPE 536
                                             ++L +MFG LGAG L+  N+SN  PE
Sbjct: 447 QQMMTLQQSLSQNRNTASQDAGQTGAATGNNGGLDLLMNMFGSLGAGGLSGTNQSNVPPE 506

Query: 537 QLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNSG 580
           + YATQL QLQEMGF+D  ENIRAL+AT+GNV+AAVERLLG+ G
Sbjct: 507 ERYATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLGSIG 550



 Score =  127 bits (318), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 70/85 (82%)

Query: 44  GDGAGEESKGAEEVNINVRCSNGSKFSVQVSLNSAVGSFKDLVARNCDIPVEQQRLIYKG 103
           GD +  +S   E V +N+RCSNG+KFSV+ SL+S V SFK+LVA++ D+P  QQRLIYKG
Sbjct: 5   GDSSQPQSGEGEAVAVNIRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKG 64

Query: 104 RILKDDQTLQSYGLEADHTVHLVRG 128
           RILKDDQTL SYGL+ADHT+H+VRG
Sbjct: 65  RILKDDQTLLSYGLQADHTIHMVRG 89


>AT2G17190.1 | Symbols:  | ubiquitin family protein |
           chr2:7478272-7481361 REVERSE LENGTH=538
          Length = 538

 Score =  317 bits (813), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 194/387 (50%), Positives = 239/387 (61%), Gaps = 19/387 (4%)

Query: 202 NPNLVREIMNTPAMQNLINNPEIVRNLIMSNPQMQELMDRNPELAHILNDPSTLRQTLEA 261
           NPN++RE+MNTPA+QNL+NNPE +R++IM+NPQM+EL+DRNPEL H+LNDPS LRQTLEA
Sbjct: 162 NPNMIREMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEA 221

Query: 262 TRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLXXXXXXXXXXXXX---- 317
            RNPE+MREMMRNTDRAMSNIES PEGFNMLRRMYENVQEP +                 
Sbjct: 222 ARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSENAGNNTSSNP 281

Query: 318 -XXISGTQG--GQVRDQSTNPSTANSETTGGSPVPNTNPLPNPWSSTRTGPAPPNNTRRS 374
              + G QG   Q  D S N S  N+ET      PN NPLPNPW +T      P  T   
Sbjct: 282 FAALLGNQGVTTQGSDTSNNISAPNAETG----TPNANPLPNPWGATAGQTTAPGRTNAG 337

Query: 375 TAGGDTRQQTPTGLGGLGMPDLEGMLGGSGMPDAASLAQLMQNPAISQMMQSILSNPQTL 434
             G                   +  LG +  PDA+ L+Q++QNPA+SQMMQS+LSNPQ +
Sbjct: 338 LGGLGGLGGLGGLGMLGA----DSPLGAT--PDASQLSQILQNPAMSQMMQSVLSNPQYM 391

Query: 435 NQILGTNTEQRGMPDLN-SLREVMRNPEFLRMFSSPXXXXXXXXXXXXXXXXXXXXXXXX 493
           NQ++  N + R M D+N  LRE+M+NP+FLR FSSP                        
Sbjct: 392 NQLMSLNPQLRSMLDMNPQLREMMQNPDFLRQFSSP-EMMQQMMSLQQSLFSQNRNTAGQ 450

Query: 494 XXXXXXXXXXXXXXXXXEMLSSMFGGLGAGSLAVPNRSNEAPEQLYATQLSQLQEMGFFD 553
                            ++L +MFG LGAG L+  N+ N  PE+ +ATQL QLQEMGF+D
Sbjct: 451 DPTQTGAATGTANNGGLDLLMNMFGSLGAGGLSGTNQPNVPPEERFATQLQQLQEMGFYD 510

Query: 554 TQENIRALIATSGNVHAAVERLLGNSG 580
             ENIRAL+AT+GNV+AAVERLLG+ G
Sbjct: 511 RAENIRALLATNGNVNAAVERLLGSIG 537



 Score =  132 bits (331), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 2/92 (2%)

Query: 42  MGGDGAGEESKGAE--EVNINVRCSNGSKFSVQVSLNSAVGSFKDLVARNCDIPVEQQRL 99
           MGG+    +   AE   V +NVRCSNG+KFSV  SL+S V SFK+L+A+N D+P  QQRL
Sbjct: 1   MGGEADSRQPLTAEGVAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRL 60

Query: 100 IYKGRILKDDQTLQSYGLEADHTVHLVRGFAP 131
           IYKGRILKDDQTL SYGL+ADHTVH+VRGF P
Sbjct: 61  IYKGRILKDDQTLLSYGLQADHTVHMVRGFVP 92


>AT5G42220.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr5:16872962-16877455 FORWARD LENGTH=879
          Length = 879

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 45/70 (64%)

Query: 57  VNINVRCSNGSKFSVQVSLNSAVGSFKDLVARNCDIPVEQQRLIYKGRILKDDQTLQSYG 116
           + +N++  +   ++ QV+ N  V  FK+ +A    +PV QQRLI++GR+LKDD  L  Y 
Sbjct: 24  LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83

Query: 117 LEADHTVHLV 126
           LE  HT+HL+
Sbjct: 84  LENGHTLHLI 93


>AT5G25270.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr5:8757577-8762002 REVERSE LENGTH=658
          Length = 658

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 57  VNINVRCSNGSKFSVQVSLNSAVGSFKDLVARNCDIPVEQQRLIYKGRILKDDQTLQSYG 116
           V I ++  +   ++++V     V + K+ VA    +  EQQRLI +G+++KDDQ L +Y 
Sbjct: 21  VEIKIKTLDSQTYTLRVDKCVPVPALKEQVASVTGVVTEQQRLICRGKVMKDDQLLSAYH 80

Query: 117 LEADHTVHLV 126
           +E  HT+HLV
Sbjct: 81  VEDGHTLHLV 90


>AT5G11080.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr5:3517449-3519449 REVERSE LENGTH=352
          Length = 352

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 48  GEESKGAEEVNINVRCSNGSKFSVQVSLNSAVGSFKDLVARNCDIPVEQQ-RLIYKGRIL 106
           G+     + + I ++  + +  ++ V     V   K  +   C +  E+Q RL+++GR+L
Sbjct: 2   GDTHDFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVL 61

Query: 107 KDDQTLQSYGLEADHTVHLVRGFAP 131
           K+DQ L  Y +E  HT++LV+G  P
Sbjct: 62  KNDQRLSDYHVEEGHTLYLVKGSPP 86