Miyakogusa Predicted Gene

Lj0g3v0338439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0338439.1 Non Chatacterized Hit- tr|G7L372|G7L372_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.55,6e-18,seg,NULL,CUFF.23141.1
         (328 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14090.1 | Symbols:  | unknown protein; Has 56 Blast hits to ...    90   2e-18

>AT5G14090.1 | Symbols:  | unknown protein; Has 56 Blast hits to 56
           proteins in 18 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other
           Eukaryotes - 8 (source: NCBI BLink). |
           chr5:4547230-4549214 FORWARD LENGTH=358
          Length = 358

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 111/241 (46%), Gaps = 25/241 (10%)

Query: 1   MKLLGWMHRKFRQNSTEPFKD-----HLVIGKAGHEIDERSYHLKPNFGSKHVQQIEKEH 55
           MK  GWMH KFR+NS EP KD        I  A   +D +  +     GS++     K+ 
Sbjct: 1   MKFWGWMHHKFRENSKEPLKDASTGNSYSILSAHPSLDSQEVYPTACAGSRYNTGFRKQV 60

Query: 56  SLRKSFSGQEAADARXXXXXXXXXXXGAMYELFHGFLAIGTLGLGCSTDPS-ATPTFGNI 114
           +L      QE++ A                + F GFLAIGTLG     D   ATPTFG +
Sbjct: 61  NLF-----QESSFAGPKQYTEEDFKDERNSDFFDGFLAIGTLGGETLLDEQPATPTFG-M 114

Query: 115 CVENIITEKEDEVTENELKLINDELEKVLGDDECINSARNXXXXXXXXXXXXXXXMISLS 174
             E+   +  D VTEN+LKLI++EL+K L        A                  I+ +
Sbjct: 115 SFEDPAIDDAD-VTENDLKLISNELDKFL-------EAEAKEGHHQPSGRNSDTNTIAST 166

Query: 175 GKPMNMMEGNSGNIGTSSICPLQGYLFGSASIELP--KVVPAKSRTSLGELFQRSKLADQ 232
            + +  ++    N       PLQ Y FGS  IELP  K+   K R SLGELFQ +++ D+
Sbjct: 167 IEAIEGVDDEEDNQPMK--FPLQEYFFGSL-IELPESKIAGKKDRASLGELFQITEVQDK 223

Query: 233 E 233
           +
Sbjct: 224 Q 224