Miyakogusa Predicted Gene

Lj0g3v0337709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0337709.1 tr|G7JBM8|G7JBM8_MEDTR EG45-like domain
containing protein OS=Medicago truncatula GN=MTR_3g107770
PE,41.88,4e-19,DPBB_1,Barwin-related endoglucanase; no
description,Barwin-like endoglucanase; Barwin-like
endogluca,CUFF.23090.1
         (133 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18660.1 | Symbols: PNP-A | plant natriuretic peptide A | chr...    88   1e-18
AT4G30380.1 | Symbols:  | Barwin-related endoglucanase | chr4:14...    69   6e-13

>AT2G18660.1 | Symbols: PNP-A | plant natriuretic peptide A |
           chr2:8091032-8091644 REVERSE LENGTH=130
          Length = 130

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 13/135 (9%)

Query: 2   IRLFTFAIIFSLLLKQMSLQVHGEVGTAAAYGPPYIPTACDGNRREQFPPGNIFAAVNEG 61
           ++     I+F+ +L  ++    G+   A  Y PPY  +AC G +RE    G     V   
Sbjct: 6   VKFVVVMIVFAQILAPIAEAAQGK---AVYYDPPYTRSACYGTQRETLVVG-----VKNN 57

Query: 62  LWDNGAACGRRYRVRCVSG---HNKPCKGGSVDVKVVDSCAAGSSCSNTLLLSNDAFAAI 118
           LW NG ACGRRYRVRC+      ++ C G +VDVKVVD C     C+  L LS DAF  I
Sbjct: 58  LWQNGRACGRRYRVRCIGATYNFDRACTGRTVDVKVVDFCR--EPCNGDLNLSRDAFRVI 115

Query: 119 SRFPNAKINIEYTQI 133
           +      I + YT I
Sbjct: 116 ANTDAGNIRVVYTPI 130


>AT4G30380.1 | Symbols:  | Barwin-related endoglucanase |
           chr4:14860486-14860994 FORWARD LENGTH=123
          Length = 123

 Score = 69.3 bits (168), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%)

Query: 52  GNIFAAVNEGLWDNGAACGRRYRVRCVSGHN---KPCKGGSVDVKVVDSCAAGSSCSNTL 108
           G + AA ++ LWDNG  CG+ + V+C    N    PC G SV VK+VD C +G  C++TL
Sbjct: 42  GVMIAAASDTLWDNGRVCGKMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCPSG--CASTL 99

Query: 109 LLSNDAFAAISRFPNAKINIEY 130
            LS +AFA I+      INI+Y
Sbjct: 100 DLSREAFAQIANPVAGIINIDY 121