Miyakogusa Predicted Gene

Lj0g3v0336789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0336789.1 tr|D8QTN2|D8QTN2_SELML Site-determining protein
OS=Selaginella moellendorffii GN=SELMODRAFT_131305 P,80.7,3e-19,no
description,NULL; SUBFAMILY NOT NAMED,ATP binding protein MinD; FAMILY
NOT NAMED,NULL; seg,NULL; ,CUFF.23021.1
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24020.1 | Symbols: MIND, ARC11, ATMIND1 | septum site-determ...    66   6e-12

>AT5G24020.1 | Symbols: MIND, ARC11, ATMIND1 | septum
           site-determining protein (MIND) | chr5:8116731-8117711
           FORWARD LENGTH=326
          Length = 326

 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 5/76 (6%)

Query: 32  KSLIPTPK-----SKPYPTKALLQWNRKPQLAGETPRXXXXXXXXXXXXXXXXXANMGLS 86
           K+LI +P+     S+  P +++LQ+NRKP+LAGETPR                 AN+GLS
Sbjct: 23  KTLISSPRFVNNPSRRSPIRSVLQFNRKPELAGETPRIVVITSGKGGVGKTTTTANVGLS 82

Query: 87  LARLGFSVVAIDADVG 102
           LAR GFSVVAIDAD+G
Sbjct: 83  LARYGFSVVAIDADLG 98