Miyakogusa Predicted Gene
- Lj0g3v0336649.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0336649.1 Non Chatacterized Hit- tr|G7ISV8|G7ISV8_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,54.17,3e-18,
,CUFF.23012.1
(106 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29830.1 | Symbols: | F-box/RNI-like superfamily protein | c... 61 2e-10
>AT3G29830.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:11737049-11738847 FORWARD LENGTH=464
Length = 464
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 5 KVGLKRLVIDKCLFKFDYILFNAPNLEYFKYSGRVWT-SYITIDRDVMKGAEIDFPFEFE 63
++ ++ L+ID C+ Y L N PN+E FKYSG V + ++ ++K +DF E E
Sbjct: 216 QIRVRELIIDNCIIPTMYCLLNLPNIEIFKYSGNVIVFDFQKVNMILLKEVYLDFFIEHE 275
Query: 64 RE-----FNEYGDELYTILSDFYPVRVLTVCSVLLQVI 96
+ E GD L +L+D R LTVCS LL+VI
Sbjct: 276 NDEPTYSPKEAGDILSHLLNDLRSSRTLTVCSYLLEVI 313