Miyakogusa Predicted Gene
- Lj0g3v0336439.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0336439.1 tr|G7II27|G7II27_MEDTR F-box domain containing
protein OS=Medicago truncatula GN=MTR_2g101940 PE=4
S,74.29,0.0000008,seg,NULL; FAMILY NOT NAMED,NULL; F-box domain,F-box
domain, cyclin-like; RNI-like,NULL; no descripti,CUFF.22992.1
(372 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80470.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 65 8e-11
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 65 9e-11
AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein | c... 63 3e-10
AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein | c... 63 3e-10
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 7e-10
AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein | c... 61 1e-09
AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein | c... 61 1e-09
AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 2e-09
AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 2e-09
AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 4e-09
AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein | chr... 57 2e-08
AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 2e-08
AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-08
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-08
AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 3e-08
AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box doma... 56 4e-08
AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein | c... 56 4e-08
AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 6e-08
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 7e-08
AT5G41630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 1e-07
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 2e-07
AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 3e-07
AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 3e-07
AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 3e-07
AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 4e-07
AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 5e-07
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 5e-07
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 6e-07
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 6e-07
AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 52 7e-07
AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 52 8e-07
AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 8e-07
AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 8e-07
AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 1e-06
AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 1e-06
AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 1e-06
AT3G58940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 2e-06
AT5G18770.1 | Symbols: | F-box/FBD-like domains containing prot... 50 2e-06
AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 50 2e-06
AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 50 3e-06
AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 50 3e-06
AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 50 3e-06
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 4e-06
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 4e-06
AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 49 4e-06
AT5G22700.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 5e-06
AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-06
AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 5e-06
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 6e-06
AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 7e-06
AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 7e-06
AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 8e-06
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 9e-06
AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 48 9e-06
>AT1G80470.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:30256185-30257916
FORWARD LENGTH=481
Length = 481
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 132/342 (38%), Gaps = 60/342 (17%)
Query: 5 LNGNSRRKSESEDEEN--------------KDRLSDLSDCILLHILSFVKAKHAVQTCVL 50
+NG ++ S +EE D +S L+D +LL ILS V + +V T +
Sbjct: 1 MNGGRGKRPNSAEEEGTMAEPSVKKSKLTESDWISGLADDLLLQILSKVPTRESVFTSRM 60
Query: 51 STRWKDLWKYLPTLILHSLDFSSLPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWV----- 105
S RW++LW+++P L L S F F L DG+ L E W+
Sbjct: 61 SKRWRNLWRHVPALDLDSSKFPHESDLEDFFDSFLQF-DGN-----LKIERFKWIYNVEE 114
Query: 106 --QPNLLKRI--VKYAVLHNIQRLGLIVTTSDIEHIPNCIFXXXXXXXXXXXXYGYTKRT 161
P + RI V L ++ L + D +P ++ Y
Sbjct: 115 HCDPEFVSRIDHVVKRGLKDLTILSKVNIEDDSVRMPVSLY--SCATLVNLTLYSVVFDA 172
Query: 162 LFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISS 221
+ ++LP L T+HL F DG ++L L I +C+ I+
Sbjct: 173 PRAQLVSLPCLKTMHLEAVKF----DGE-----TILGTL----ISSCSFLDELTIITHDH 219
Query: 222 KTLTNLTVLHP----------------CQYYKVYFFSPSLRTFAFTGTPFETLCGINISS 265
L +++V P C+ V +P L + T E+ NIS
Sbjct: 220 DELGDVSVRSPSLRRFKLESMREDYDECEDPNVEVDTPGLEYMSITDYQSESFIIHNISP 279
Query: 266 IEHVNFDIHWWCAEYSFILLSWLVNLTNIKSLTVSTSTLQVL 307
VN D+ + + ++ ++ ++ ++ LT+S TL+++
Sbjct: 280 CAKVNIDVVFDAEDEDSVIHDFITAISTVRELTISARTLEMI 321
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 49/324 (15%)
Query: 13 SESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFS 72
S E + N DR+S+L D +L ILS + K +V T VLS RW++LW ++P L L S +F
Sbjct: 6 SVKEKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFP 65
Query: 73 SLPSFTKFVSRLLTIRDGSTVLQGLDF--------EH-----LGWVQPNLLKRIVKYAVL 119
F FV+R L GS Q L+ EH W+ + +R+ + V
Sbjct: 66 DDDVFVSFVNRFL----GSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVH 121
Query: 120 HNIQRLGLIVTTSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHL-- 177
+ + +V +P ++ Y P+S++LP + +HL
Sbjct: 122 NEVDDDDELVK------MPLSLYSCERLVNLQL----YRVALDHPESVSLPCVKIMHLDM 171
Query: 178 VNFDFCVNDDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTV---LHPCQ 234
V +D D + S L L I + + + ++C+ S++L + + + Q
Sbjct: 172 VKYDA----DSTLEILISGCPVLEELTIVR-DPNDSLEVVCVRSQSLKSFKIDSERYESQ 226
Query: 235 YYKVYFFSPSLRTFAFTGTPFETLCGINISSIEHVNFDIHWWCAEYS-----------FI 283
+ V +P L ++ NI V+ D+ + EY+ +
Sbjct: 227 NHVVTIDAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDV-IFNVEYNDPLEPDDSSKIAM 285
Query: 284 LLSWLVNLTNIKSLTVSTSTLQVL 307
L +L L+ + + +S+ TLQV+
Sbjct: 286 LGKFLTGLSTVSEMVISSDTLQVI 309
>AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
+DR+S L + +L HILSF++ K +V+T VLS+RW+DLW ++P L L DFS
Sbjct: 9 GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSAS 68
Query: 80 FVSRLLTIRDGSTVLQG 96
FV + L R G + L+G
Sbjct: 69 FVDKFLNFR-GESYLRG 84
>AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
+DR+S L + +L HILSF++ K +V+T VLS+RW+DLW ++P L L DFS
Sbjct: 9 GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSAS 68
Query: 80 FVSRLLTIRDGSTVLQG 96
FV + L R G + L+G
Sbjct: 69 FVDKFLNFR-GESYLRG 84
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 147/332 (44%), Gaps = 36/332 (10%)
Query: 5 LNGNSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTL 64
++G ++ ++ D +S+L + +L +L ++ K V++ VLS+RW++LWKY+P
Sbjct: 1 MDGAGEKRVRAKGSREVDWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGF 60
Query: 65 ILHSLDFSSLPSFT-------KFVSRLLTIRDGSTVLQG--LDFEHLGWVQPN--LLKRI 113
L DF +F+ +FV + + + LQ L+++ G+ +P L++R
Sbjct: 61 NLSYCDFHVRNTFSYDHNTFLRFVDSFMGF-NSQSCLQSFRLEYDSSGYGEPKLALIRRW 119
Query: 114 VKYAVLHNIQRLGLIVTTSDIE--HIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPA 171
+ V ++ LG++ + D +P ++ PK ++LP+
Sbjct: 120 INSVVSRKVKYLGVLDDSCDNYEFEMPPTLYTCETLVYLTLDGLSLAS----PKFVSLPS 175
Query: 172 LTTLHLVNFDFCVNDDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLH 231
L LHL F D + S L +L I N + C+ S++L + T +
Sbjct: 176 LKELHLSIVKFA--DHMALETLISQCPVLENLNI-NRSFCDDFEFTCVRSQSLLSFTHVA 232
Query: 232 PC-----QYYKVYFFSPSLRTFAFTGTPFETLCGINISSIEHVNFD--IHWWCAEY---- 280
+ V +P L+ + + +++S+ + D + C +
Sbjct: 233 DTDEMLNEDLVVAIDAPKLKYLRLSDHRIASFILNDLASLVEADIDTVFNLICKKMFNPN 292
Query: 281 ----SFILLSWLVNLTNIKSLTVSTSTLQVLF 308
++ +LV +++IK+L +++STL+V++
Sbjct: 293 DLNKRNMIRDFLVGISSIKTLIIASSTLEVIY 324
>AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776054-11777517 REVERSE LENGTH=415
Length = 415
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 7/233 (3%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
DR++ LSD I+ HILS + K A T VLS RW+ L+ + P L L + SF FV
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 82 SRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTTSDIEH-IPNC 140
R+L + G+ ++ + + + + R + + H + L + + + D +P
Sbjct: 62 DRVLVV-TGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLE 120
Query: 141 IFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPFSVLNRL 200
IF Y + P ++LP+L TL L + FC D + S L
Sbjct: 121 IFTCKTLVELKLARGFY---AMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSACPVL 177
Query: 201 NSLIIENCNLSGAAYILCISSKTLTNLTVLHP--CQYYKVYFFSPSLRTFAFT 251
L I + +SS TL LT+ +Y+ + +PSL ++
Sbjct: 178 EELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEYS 230
>AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776368-11777517 REVERSE LENGTH=332
Length = 332
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 7/233 (3%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
DR++ LSD I+ HILS + K A T VLS RW+ L+ + P L L + SF FV
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 82 SRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTTSDIEH-IPNC 140
R+L + G+ ++ + + + + R + + H + L + + + D +P
Sbjct: 62 DRVLVV-TGNFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLE 120
Query: 141 IFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPFSVLNRL 200
IF Y + P ++LP+L TL L + FC D + S L
Sbjct: 121 IFTCKTLVELKLARGFY---AMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSACPVL 177
Query: 201 NSLIIENCNLSGAAYILCISSKTLTNLTVLHP--CQYYKVYFFSPSLRTFAFT 251
L I + +SS TL LT+ +Y+ + +PSL ++
Sbjct: 178 EELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEYS 230
>AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:22254405-22255798 FORWARD LENGTH=403
Length = 403
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 27/302 (8%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
DRLS L + +L ILS + K +V+T VLS W++LW ++P L L + DF F +F+
Sbjct: 14 DRLSALPEHLLCRILSELSTKDSVRTSVLSKHWRNLWLHVPVLELETSDFPDNLVFREFI 73
Query: 82 SRLLTIRDGSTVLQGLD---------FEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTTS 132
R + D L+ D ++ W+ +++KR V ++ N V
Sbjct: 74 DRFVGF-DKEIDLKSFDIFYDVNVLWYDDFLWMIDDVVKRRVCDLMVTN----NPYVVNE 128
Query: 133 DIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAE 192
+ +P ++ L +S+ LP + TL+L ++ D ++
Sbjct: 129 KLVKMPISLYSCATLVNLNLSFVAMN--NLPSESVCLPRVKTLYLHGVK--LDGDSILGT 184
Query: 193 PFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYY--KVYFFSPSLRTFAF 250
S + L L + + ++C S+++ + T+ C+Y V P L
Sbjct: 185 LVSSCSVLEDLTVVT-HPGDYEKVVCFRSQSVKSFTIESQCEYKDPNVEIDCPRLEYMCI 243
Query: 251 TGTPFETLCGINISSIEHVNFDIHWWCAEYS-----FILLSWLVNLTNIKSLTVSTSTLQ 305
E+ +I V+ DI ++ EY ++ ++L ++ ++ +T+S+ TL+
Sbjct: 244 REYQSESFVVHSIGPYAKVDVDI-FFEVEYEDPLAISMIRNFLTGISKVREMTISSRTLE 302
Query: 306 VL 307
V+
Sbjct: 303 VI 304
>AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:14867122-14870083
FORWARD LENGTH=532
Length = 532
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 25/300 (8%)
Query: 27 LSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLIL-HSLDFSS----------LP 75
L D +L+ ILSF+ K A T +LS RW+ L+ P L +SL S
Sbjct: 4 LPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQK 63
Query: 76 SFTKFVSRLLTIRDGSTVLQ-GLDF-EHLGWVQPNL-LKRIVKYAVLHNIQRLGLIVTTS 132
SF FV L ++ G + L F E LG V + + R + A+ H + L L + +
Sbjct: 64 SFVGFVDSTLALQGGKGIKSFSLKFKETLGDVNGEVDVNRWICNALEHGVSELHLRIDYT 123
Query: 133 DIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAE 192
H+P+ IF + P ++LP+L L L + F V +
Sbjct: 124 KRCHLPSEIFTSTKLVKLSLVTQSCF--PVVPNCISLPSLKVLFLDSIWFEVPQFLIFLT 181
Query: 193 PFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYKVY----FFSPSLRTF 248
L L I + + G Y ISSKT+ L+V + C Y+ Y F +PS+
Sbjct: 182 ACPALEDLT--IYQKPHSVGMPY--HISSKTIKRLSVTYTCGYFVDYGLKLFNTPSVVDL 237
Query: 249 AFTGTPFETLCGINISSIEHVNFDIHWWCAEYSFILLSWLVNLTNIKSLTVSTSTLQVLF 308
++ +N+ S+ DIH + + + + L + N+K+L +++ST++V+
Sbjct: 238 YYSDYVRHKYPHMNLDSLPKATLDIH-FLDDNAANVTELLSGIRNVKTLHLTSSTVKVIL 296
>AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24722971-24724475
REVERSE LENGTH=442
Length = 442
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 6 NGNSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLI 65
+G R +++ D+E D L DL + +L HIL + K V+T VLS++W++LW+ +P L
Sbjct: 4 DGEKRVRAKQSDDE-VDWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLD 62
Query: 66 LHSLDFSSLPSFTKFVSRLLT 86
L S DF+ +F F+ R ++
Sbjct: 63 LDSSDFTENNTFVSFIDRFMS 83
>AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein |
chr4:8080118-8081669 REVERSE LENGTH=459
Length = 459
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 132/325 (40%), Gaps = 36/325 (11%)
Query: 11 RKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLD 70
R S + DRL +L DC+L IL + K V+ VLS RW+++W+Y+P L L D
Sbjct: 8 RVSAKPSGDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLECGD 67
Query: 71 F--------SSLPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRI-----VKYA 117
F S + FV R L + + LQ + W L+ +
Sbjct: 68 FMVREYYDSSEFNALLGFVYRFLGF-NSESCLQKFKLT-VNWYDDVQLETVHFTEWFNAV 125
Query: 118 VLHNIQRLGLIVTT--SDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTL 175
V +Q L ++ T D IP +F R ++LP+L +
Sbjct: 126 VKRKVQHLHILDKTWGRDEVVIPPTVFTCGSLISLNLYDVYLPNREF----VSLPSLKVI 181
Query: 176 HLVNFDFCVNDDGVVAEPF-SVLNRLNSLIIENCNLSGAAYILCISSKTLTNLT-VLHPC 233
L D V D+ E S L SL + NL+ + + +SS++L + + V
Sbjct: 182 VL---DAVVFDEDFAFEMLVSGCPVLESLSVNKINLNDISESVQVSSQSLLSFSYVADDD 238
Query: 234 QYYKVYFFSPSLRTFAFTGTPFETLCGINISSIEHVNFD-IHWWCAEYSF---------I 283
Y +V +P L + N S+ + D + +EY F I
Sbjct: 239 DYLEVVIDAPRLHYLKLNDKRTASFIMKNHGSLLKADIDFVFNLGSEYMFDPNYLPTRHI 298
Query: 284 LLSWLVNLTNIKSLTVSTSTLQVLF 308
+ +LV L+ +K + +S+STLQV++
Sbjct: 299 IRDFLVGLSGVKDMIISSSTLQVIY 323
>AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24716497-24718050
REVERSE LENGTH=456
Length = 456
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 14 ESEDEENK---DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLD 70
ES D+++ D + DL + ++ H+L + K ++ CVLST+W+ LW+Y+P L L D
Sbjct: 18 ESSDKKSGYEVDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSD 77
Query: 71 FSSLPSFTKFVSRLLTIRDGSTVLQ---GLDFEHLGWVQPN--LLKRIVKYAVLHNIQRL 125
F+ +F FV R L+ S + + G D + +G + + R + V +Q L
Sbjct: 78 FTEYNTFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHL 137
Query: 126 GL 127
L
Sbjct: 138 DL 139
>AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:18149369-18150892 FORWARD LENGTH=377
Length = 377
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 19 ENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP--- 75
E D +S+ DC+L IL + K +V+T VLS RW++LW +P L L + DF P
Sbjct: 2 EEFDYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFPVFPYPY 61
Query: 76 --SFTKFVSRLLTIRDGSTVLQGL--DFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTT 131
F +F+ R + + S + + + FEH G+ + L ++ V IQ L + + T
Sbjct: 62 EEGFVRFMDRFMEFKCRSRLQKFMITYFEHNGYR--DRLMELIGTLVDRGIQHLYVYMHT 119
Query: 132 SD 133
+
Sbjct: 120 CN 121
>AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21778381-21780014 REVERSE LENGTH=482
Length = 482
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF---------- 71
DR+S+L D + HILSF+ AKH T VLS W +LWK +P L + +F
Sbjct: 2 DRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAER 61
Query: 72 -SSLPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIV- 129
SF FV R+L ++D S + + + + + P+ + R + + + L L +
Sbjct: 62 LEIRQSFVDFVDRVLALQDDSPIDR-FSLKCITGIHPDHVNRWICNVLQRGVSDLDLFID 120
Query: 130 -----TTSDIEHIPNCIF 142
T D + +P +F
Sbjct: 121 FSYEDTQEDEDMLPQEMF 138
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
D ++ L D +L+ ILSFV AV TCVLS RW+ LW +LP L S + S P F+
Sbjct: 2 DNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVS-PWDSRPGIVDFI 60
Query: 82 SRLLTIRDGSTVLQ-GLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGL 127
++ L I + + + ++P +KR ++ AV H ++ L +
Sbjct: 61 NKKLPIHRAPVIERLCIHINSNPHIKPEYIKRWIEIAVSHYVRELQI 107
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 51/313 (16%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLIL-HSLDFSSLPSFT 78
N+DR+SDL + +LL ILS + K V T VLS W+ LWK +PTL + + S +++
Sbjct: 12 NEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSEDETYS 71
Query: 79 KFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTTSDIEHIP 138
+ V RLL + + + L+ L HLG+ ++ +++ +G+ + + H+
Sbjct: 72 EIVCRLL-LSNKAPFLESL---HLGF----------RFGECRSVE-VGMWIGIAYARHVR 116
Query: 139 NCIFXXXXXXXXXXXXYG-YTKRTL------------FPKSLNLPALTTLHLVNFDFCVN 185
+ + G Y TL P L +L TL L N D+ +
Sbjct: 117 DLVLHVESVKGSFIFPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYKYD 176
Query: 186 DDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVL--HPCQYYKVYFF-S 242
D V S L +L++ NL I+ +L LT+ + +Y Y +
Sbjct: 177 DS--VYNLLSGCPNLENLVVYRGNLLEVE-TFTIAVPSLQRLTIYDDNDGEYCTGYVINA 233
Query: 243 PSLRTFAFTGTPFETLCGINISSIEHVNFDIHWWCAEYSFILLSWLVN------LTNIKS 296
PSL+ G F+ L I + + E + + +S ++N LT++K
Sbjct: 234 PSLKYLKIDG--FKALESCLIENAPEL--------VEATIMNVSKIINEKLLETLTSVKR 283
Query: 297 LTVSTSTLQVLFS 309
L+++ S L++ FS
Sbjct: 284 LSLALSPLELKFS 296
>AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:21787146-21788807
REVERSE LENGTH=475
Length = 475
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 31/312 (9%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
DR+S LS+ I+ +I+SF+ AK A VLS RW++++ +P L + + S T F+
Sbjct: 2 DRISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPNLEFDN-TLENQGSLTDFL 60
Query: 82 SRLLTIRDGSTVLQGLDFEHLGWVQPN-------LLKRIVKYAVLHNIQRLGLIVTTSDI 134
+ LL + ST ++ + + G PN L ++K VL +L + VT
Sbjct: 61 NGLLAL-PASTRIKNVSIKRRGRDGPNRDADLNRFLCNVLKRGVLK--LKLDIWVTLDGR 117
Query: 135 EHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPF 194
+P +F + L P++ LPAL TL + F +
Sbjct: 118 YSLPVEVFTCKTLVELELG--SILQIDLVPENALLPALKTLIIDAVQFSDQSGCAFQKLL 175
Query: 195 SVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYKVY-------FFSPSLRT 247
S L L + N + +SS TL LT+ H + Y F +PSL +
Sbjct: 176 SSCPVLVELRMLNVQWEHWQWSRRVSSPTLEKLTMNHRYHFGNTYYDMEGITFDTPSLTS 235
Query: 248 FAFTGTPFETLCGINISSIEHVNFDI-----HWWCAEYSF------ILLSWLVNLTNIKS 296
+ P ++ +N+ S+ + H W +++ + + + L N+++
Sbjct: 236 LKYYDLPPKSYPTVNLDSLVEATISLTLPLHHAWTGKHARRGDTVPSVTNLIKGLRNVET 295
Query: 297 LTVSTSTLQVLF 308
L +S++ F
Sbjct: 296 LNLSSTDTVAAF 307
>AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box
domain, cyclin-like (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
F-box domain, Skp2-like (InterPro:IPR022364),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is:
F-box/RNI-like/FBD-like domains-containing protein
(TAIR:AT5G53635.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink). |
chr5:21788311-21790690 REVERSE LENGTH=517
Length = 517
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
+DR+S + +L IL+++ K V+T VLSTRW+ LW +P+L L S DFS +F
Sbjct: 20 KEDRISQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWLLVPSLELDSRDFSDFNTFVS 79
Query: 80 FVSR 83
F R
Sbjct: 80 FCDR 83
>AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29615174-29616738 REVERSE LENGTH=452
Length = 452
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 6 NGNSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLI 65
G+ +R SE+ DRLS+L + ++ I+ + K V++ VLS RW++LW+Y+P L
Sbjct: 4 GGDEKRARRSEE----DRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLN 59
Query: 66 LHSLDFSSLPSFTKFVSRLLTIRDGSTVLQGLDFEH 101
+ F +F FV R L + D + Q +
Sbjct: 60 VEYNQFLDYNAFVSFVDRFLAL-DRESCFQSFRLRY 94
>AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24713306-24714843 REVERSE LENGTH=453
Length = 453
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 58/329 (17%)
Query: 14 ESEDEENKDR---LSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLD 70
ES D + D +SDL + +++ +L + K ++T VLST+W+++W+Y+P L L +
Sbjct: 18 ESSDNGSGDEVDWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRH 77
Query: 71 FSSLPSFTKFVSRLL---------TIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHN 121
F+ S F+ R + +R GS + +D W + + A+
Sbjct: 78 FTEFDSLASFIDRFMRSNRKVNKFKLRCGSDLDGDVDLATCSW-------KWIYMAIKRK 130
Query: 122 IQRLGLIVTTSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLV--- 178
+Q + VT + P I+ TK P+ ++LP+L L L
Sbjct: 131 VQHID--VTWPGVRIYPE-IYNCESLVSLKLSEVTLTK----PEFVSLPSLKVLVLDWVE 183
Query: 179 ---NFDFCVNDDGV-VAEPFSVLNR-LNSL----IIENCNLSGAAYILCISSKTLTNLTV 229
F F + G V E F++ R L+++ +I LS Y SSK+ + V
Sbjct: 184 FYNEFAFDMLMSGCPVLESFTLCRRYLDNVRVLRVISQSLLSFNYY--GSSSKSFRDDLV 241
Query: 230 LHPCQYYKVYFFSPSLRTFAFTGTPFETLCGINISSIEHVNFDIHW-WCAEYSF------ 282
V +P L + + N+SS+ + DI + +C F
Sbjct: 242 --------VILDAPKLEKLKLSHQLTASFIIENLSSLVEADIDIEFNFCRGKKFDPDDLP 293
Query: 283 ---ILLSWLVNLTNIKSLTVSTSTLQVLF 308
++ ++LV L+ +K++T++ TL+V++
Sbjct: 294 KREMIRNFLVGLSRVKTMTIAACTLEVIY 322
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 5 LNGNSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTL 64
++ + + ++ + D +S L DC+L +L + K V+T VLS RW++LWK++P L
Sbjct: 1 MDEDREKHVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGL 60
Query: 65 ILHSLDFSSLPSFTKFVSRLL 85
L + DF +F FV L
Sbjct: 61 DLDNTDFQEFNTFLSFVDSFL 81
>AT5G41630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16650282-16651835 FORWARD LENGTH=455
Length = 455
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 45/191 (23%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF-------- 71
+D +SDL D ++ HILSF+ AV T VL+ RWK L + +HSLDF
Sbjct: 10 GRDIISDLPDALIGHILSFLPTIEAVATTVLAKRWKPLLSF-----VHSLDFDDSLCLHP 64
Query: 72 --------SSLPSFTKFVSRLLTIRDGSTVLQ-GLDFEH-------LGWVQPNLLKRIVK 115
++ SF +FV +L ++ + + + L+ +H L W+Q N+LKR
Sbjct: 65 AKTNEEKRTNATSFMRFVDGVLALQGNARINKFRLNGKHIINERWVLDWIQ-NVLKR--- 120
Query: 116 YAVLHNIQRLGLIVTT------SDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNL 169
++ + L V++ S H+P IF G ++ + ++L
Sbjct: 121 -----DVSDIRLYVSSCSDGFDSSFYHLPPEIFVSQTLVTLIIMFEGDINISV-GREVSL 174
Query: 170 PALTTLHLVNF 180
P L TLHL +F
Sbjct: 175 PKLKTLHLYHF 185
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTL----ILHSLDFSSLPSF 77
DR+S LSD +LL ILSF+ K V T +LS RW+ LW + L H+ D+ SF
Sbjct: 2 DRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDDSYHTGDYK---SF 58
Query: 78 TKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNL-LKRIVKYAVLHNIQRLGLIVTTSDIE- 135
++FV R L + + + V++ L +LG P + + + +A+ +++L + + TS +
Sbjct: 59 SQFVYRSL-LSNNAPVIKHLHL-NLGPDCPAIDIGLWIGFALTRRLRQLKINIRTSSNDA 116
Query: 136 --HIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDG 188
+P+ ++ + P S+ LP+L LHL D+ DD
Sbjct: 117 SFSLPSSLYTSDTLETLRLINFVLLD---VPSSVCLPSLKVLHLKTVDY--EDDA 166
>AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22974520-22975992
FORWARD LENGTH=435
Length = 435
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 12 KSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF 71
+S ED + DR+S L + +L ILS + A+ T +LS RWK +WK LPTL+ +
Sbjct: 5 RSGIEDVTSPDRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVYNENSC 64
Query: 72 SSLPS--FTKFVSRLLTIRDG 90
S++ S F +F R L + +
Sbjct: 65 SNIGSLGFDQFCGRSLQLHEA 85
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 17 DEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHS 68
D N+DR+SDL D +LL ILS + ++A+ T VLS RW+ LW LP L S
Sbjct: 8 DSMNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDS 59
>AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21859148-21860672
REVERSE LENGTH=444
Length = 444
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 12 KSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF 71
K S+ E ++RLS L D ++ ILS + K AV+T +LSTRW++LW+ +P L D
Sbjct: 9 KGSSQGSE-EERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVL---DFDS 64
Query: 72 SSLPSFTKFVS 82
L SF++FVS
Sbjct: 65 RELRSFSEFVS 75
>AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=675
Length = 675
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
+D +S L D ++ IL +++ K AV T VLS RW+ LW P L+L S DF+ +F
Sbjct: 21 KEDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDYNAFVS 80
Query: 80 FVSRLL 85
FV + L
Sbjct: 81 FVDKFL 86
>AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=642
Length = 642
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
+D +S L D ++ IL +++ K AV T VLS RW+ LW P L+L S DF+ +F
Sbjct: 21 KEDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDYNAFVS 80
Query: 80 FVSRLL 85
FV + L
Sbjct: 81 FVDKFL 86
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLIL-HSLDFSSLPSFTKF 80
D+LS L + +L+ ILS + AK V T VLS RW+ LW +P LI S SF++F
Sbjct: 2 DKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDDSYQAIEYGSFSRF 61
Query: 81 VSRLLTIRDGSTVLQGLDFE 100
V R T+ D VL L F+
Sbjct: 62 VDRSFTLHDAQ-VLDTLHFK 80
>AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 125/312 (40%), Gaps = 32/312 (10%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
N DR+ +L D +L +LS++ +V+T VLS RW+ LW +P L L DF ++
Sbjct: 2 NCDRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPD-ENYAS 60
Query: 80 FVSRLLTIRDGSTVLQ-GLDFEHLGWVQPNLLKRIVKYAVLHNIQRL---GLIVTTSDIE 135
F+ L S + + L ++ + L +V V IQ L G E
Sbjct: 61 FIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVT-TVDRGIQHLDAKGFETNMCVRE 119
Query: 136 HIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEP-F 194
+P I+ G ++LP+L +HL D DD ++ E
Sbjct: 120 FMPQNIYKCNTLVSLMLVTVGIENPEFV---VSLPSLKIMHLE--DVWYYDDPLIMEKII 174
Query: 195 SVLNRLNSLI----IENCNLSGAAYILCISSKTLTNLTVLHP----CQYYKVYFFSPSLR 246
S L + I+ CNL + L + S +L + + C Y+ V +P L
Sbjct: 175 SGCPVLEDFVLIRPIDFCNLDVLQF-LRVRSLSLRSFRLTFEYSVSCTYFSVEIDAPRLE 233
Query: 247 TFAFTGTPFETLCGINISSIEHVNFDIHWWCA-----------EYSFILLSWLVNLTNIK 295
F +T+ N++S+ ++ D + I+ +L ++ ++
Sbjct: 234 YLNFNDDQSDTIVVKNMTSLSMIDIDSEFNVKFGGSRLEPGDLRKRDIIRDFLTAISCVR 293
Query: 296 SLTVSTSTLQVL 307
+ +S TL+VL
Sbjct: 294 HMIISRRTLEVL 305
>AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 125/312 (40%), Gaps = 32/312 (10%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTK 79
N DR+ +L D +L +LS++ +V+T VLS RW+ LW +P L L DF ++
Sbjct: 2 NCDRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPD-ENYAS 60
Query: 80 FVSRLLTIRDGSTVLQ-GLDFEHLGWVQPNLLKRIVKYAVLHNIQRL---GLIVTTSDIE 135
F+ L S + + L ++ + L +V V IQ L G E
Sbjct: 61 FIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVT-TVDRGIQHLDAKGFETNMCVRE 119
Query: 136 HIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEP-F 194
+P I+ G ++LP+L +HL D DD ++ E
Sbjct: 120 FMPQNIYKCNTLVSLMLVTVGIENPEFV---VSLPSLKIMHLE--DVWYYDDPLIMEKII 174
Query: 195 SVLNRLNSLI----IENCNLSGAAYILCISSKTLTNLTVLHP----CQYYKVYFFSPSLR 246
S L + I+ CNL + L + S +L + + C Y+ V +P L
Sbjct: 175 SGCPVLEDFVLIRPIDFCNLDVLQF-LRVRSLSLRSFRLTFEYSVSCTYFSVEIDAPRLE 233
Query: 247 TFAFTGTPFETLCGINISSIEHVNFDIHWWCA-----------EYSFILLSWLVNLTNIK 295
F +T+ N++S+ ++ D + I+ +L ++ ++
Sbjct: 234 YLNFNDDQSDTIVVKNMTSLSMIDIDSEFNVKFGGSRLEPGDLRKRDIIRDFLTAISCVR 293
Query: 296 SLTVSTSTLQVL 307
+ +S TL+VL
Sbjct: 294 HMIISRRTLEVL 305
>AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8060681-8062231 REVERSE LENGTH=434
Length = 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTL------ILHSLD----- 70
D +S L D +L HILSF+ K A T +LS RW++L+ ++P L LH +
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61
Query: 71 FSSLPSFTKFVSRLLTIRDGSTVLQ-------GLDFEHL-GWVQPNLLKRIVKYAVL 119
+ SF KFV R+L ++ S + + G D + GW+ L + + + +L
Sbjct: 62 YEIQKSFMKFVDRVLALQGNSPIKKLSLKLRTGFDSHRVDGWISNALARGVTELDLL 118
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFT 78
KDR+S+L D +L+ ILSF+ K V T V S +W+ LWK +P L S D+ +T
Sbjct: 14 GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYT 72
>AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18151665-18153164
FORWARD LENGTH=438
Length = 438
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 41/316 (12%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPS-FT 78
+DR+S+L D +L HIL ++ + +++T VLS+RW+ LW +P L ++ DF + + F
Sbjct: 2 GRDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLFE 61
Query: 79 KFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKY---AVLHNIQRLGLIVTTSD-- 133
+ + L + G L++E + L+ R V + V IQ L VT +D
Sbjct: 62 SLMDKFLEVNRGRLQNFKLNYESNLYY---LMDRFVPWIATVVDRGIQHLD--VTATDCP 116
Query: 134 ---IEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPK-SLNLPALTTLHLVNFDFCVNDDGV 189
I+ +P I G PK ++LP L +HL + + +
Sbjct: 117 PWTIDFMPANICKSKTLVSLKLVNVGLDT----PKFVVSLPCLKIMHLEDIFYS----PL 168
Query: 190 VAEPF-SVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVL----HPCQYYKVYFFSPS 244
+AE S L L I N L + S+TL N + + V +P
Sbjct: 169 IAENLISGCPVLEDLTIVR-NHEDFLNFLRVMSQTLKNFRLTFDWGMGSNDFSVEIDAPG 227
Query: 245 LRTFAFTGTPFETLCGINISSIEHVNFDIHWWCA------------EYSFILLSWLVNLT 292
L+ +F + + + N+SS+ ++ D + I+ +L ++
Sbjct: 228 LKYMSFRDSQSDRIVVKNLSSLVKIDLDTEFNLKFGLGSPLEPEDLTKRDIIRDFLTGIS 287
Query: 293 NIKSLTVSTSTLQVLF 308
++K + +S TL+VL+
Sbjct: 288 SVKHMIISHPTLEVLY 303
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 21/225 (9%)
Query: 17 DEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF----- 71
D E D S L D ++ HILS + K A T VL+ +W+ L+ ++P+L + DF
Sbjct: 2 DSEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQE 61
Query: 72 ------SSLPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRL 125
L SF FV R+L ++ G++ ++ V P+ + R + + + L
Sbjct: 62 GKREKDGILRSFMDFVDRVLALQ-GASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHL 120
Query: 126 GLIVTTSDIEHIPNCIFXXXXXXXXXXXXYGY-TKRTLFPKSLNLPALTTLHLVNFDFCV 184
L + D E + + GY L+ + LP L TL L + +F
Sbjct: 121 ALFM---DFEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGR 177
Query: 185 NDDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTV 229
+ VL L L N+ + +SS +L NL +
Sbjct: 178 GQFQTLLPACPVLEELMLL-----NMEWKDRNVILSSSSLKNLKI 217
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 21 KDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILH-SLDFSSLPSFTK 79
+DRLS L D LL ILS++ K + T +LS RW+ LW +P L L ++ P F++
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQ 64
Query: 80 FVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRI---VKYAVLHNIQRLGLIVTTSDIE- 135
FV R L + T L+ L+ + +G + K + V+ V ++ L + + +
Sbjct: 65 FVDRSLLLHKAPT-LESLNIK-IGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPI 122
Query: 136 HIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPFS 195
+P C+F + + + +L TLHL++ + DD + S
Sbjct: 123 RLPKCLFTCSTLAVLKLENITLEDASCY---VCFQSLKTLHLLDVKYL--DDQSLPRIIS 177
Query: 196 VLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYK 237
+ L L+++ C ++ +++ +L L++ Q ++
Sbjct: 178 SCSSLEDLVVQRCP-GDNVKVVTVTAPSLKTLSLHKSSQAFE 218
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 21 KDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILH-SLDFSSLPSFTK 79
+DRLS L D LL ILS++ K + T +LS RW+ LW +P L L ++ P F++
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQ 64
Query: 80 FVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRI---VKYAVLHNIQRLGLIVTTSDIE- 135
FV R L + T L+ L+ + +G + K + V+ V ++ L + + +
Sbjct: 65 FVDRSLLLHKAPT-LESLNIK-IGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPI 122
Query: 136 HIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPFS 195
+P C+F + + + +L TLHL++ + DD + S
Sbjct: 123 RLPKCLFTCSTLAVLKLENITLEDASCY---VCFQSLKTLHLLDVKYL--DDQSLPRIIS 177
Query: 196 VLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYK 237
+ L L+++ C ++ +++ +L L++ Q ++
Sbjct: 178 SCSSLEDLVVQRCP-GDNVKVVTVTAPSLKTLSLHKSSQAFE 218
>AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536906-7537853
REVERSE LENGTH=315
Length = 315
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 57/332 (17%)
Query: 6 NGNSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLI 65
G RR E DR+S L D +L ILS + ++AV T +LSTRWKDLW P L
Sbjct: 4 QGAIRRSGE-------DRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLD 56
Query: 66 LHSLDFSSLPSFTKFVSRLL-TIRDG-------STVLQGLD-FEHLGWVQPNLLKRIVKY 116
+ F +F F +R L + +D S ++ +D + + W++ + +RI
Sbjct: 57 IDIDAFDDATTFISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHL 116
Query: 117 AVLHNIQRLGLIVTTSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLH 176
V I + I+ +P ++ R +F ++LP L +H
Sbjct: 117 EVDSRIDHM--------IDTLPLTVYLSESLVSLRLHLV-MLHRFVF---VSLPNLKVMH 164
Query: 177 LVNFDFCVNDDGVVAEPF----SVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVL-- 230
L + + E F VL L ++ N + +L +SS++L +L ++
Sbjct: 165 LEENIYSYAE---TMEKFISSCPVLEDLT--VVRNVD-EATEKVLRVSSQSLNSLKLVID 218
Query: 231 -HPCQY------YKVYFFSP-----SLRTFAFTGTPFETLCGINISSIEHVNFDI-HWWC 277
C Y +KV +P SL+ LC + I+ V+F++ W
Sbjct: 219 SSKCWYNDDSDDWKVVIDAPQLVYLSLKDDQSVSFVINNLCSSAKADIK-VSFNVSDIWD 277
Query: 278 AEYSFI---LLSWLVNLTNIKSLTVSTSTLQV 306
E SF + +L L++++ +T+S +TL+V
Sbjct: 278 LEESFERSNVGKFLTGLSSLRDMTISGTTLKV 309
>AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536328-7537853
REVERSE LENGTH=450
Length = 450
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 6 NGNSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLI 65
G RR E DR+S L D +L ILS + ++AV T +LSTRWKDLW P L
Sbjct: 4 QGAIRRSGE-------DRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLD 56
Query: 66 LHSLDFSSLPSFTKFVSRLL-TIRDG-------STVLQGLDF-EHLGWVQPNLLKRI--- 113
+ F +F F +R L + +D S ++ +D + W++ + +RI
Sbjct: 57 IDIDAFDDATTFISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHL 116
Query: 114 -VKYAVLHNIQRLGLIVTTSD 133
V + H I L L V S+
Sbjct: 117 EVDSRIDHMIDTLPLTVYLSE 137
>AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 132/329 (40%), Gaps = 44/329 (13%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLP------TLILHSLDFSS-- 73
D S L + +L HILSF+ K A T VLS RW++L+ ++P ++ LH +
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 74 ---LPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVT 130
L SF FV R+L + G ++++ + V + + R + + + L L +
Sbjct: 62 EGILQSFMDFVDRVLDLH-GDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 131 TSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVV 190
D+ +P+ + + + K L LP L TL L + C+ ++
Sbjct: 121 FRDLYSLPHEV--GVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLDSCWLCIGQFQIL 178
Query: 191 AEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTV-LHPC----QYYKVYFFSPSL 245
L L+ N + +SS L LT+ LH C + F +PSL
Sbjct: 179 LLACPALEELDM-----TNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAPSL 233
Query: 246 RTFAFTGTPFETLCGINISSIEHVNFDIHWWCAEYSFILL-----------------SW- 287
F + + E +N+ ++ ++ A+ + +W
Sbjct: 234 VYFYYCDSLAEDYPQVNLKNLVEAQINLLLTQAQIEQVRALNNEMLVADDVFPGLGNAWK 293
Query: 288 -LVNLTNIKSLTVSTSTLQVLF-SIPYLW 314
+ L N++ L +S TL+V F S+ Y W
Sbjct: 294 LITGLRNVQQLYLSPDTLEVSFLSLVYFW 322
>AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 132/329 (40%), Gaps = 44/329 (13%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLP------TLILHSLDFSS-- 73
D S L + +L HILSF+ K A T VLS RW++L+ ++P ++ LH +
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 74 ---LPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVT 130
L SF FV R+L + G ++++ + V + + R + + + L L +
Sbjct: 62 EGILQSFMDFVDRVLDLH-GDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 131 TSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVV 190
D+ +P+ + + + K L LP L TL L + C+ ++
Sbjct: 121 FRDLYSLPHEV--GVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLDSCWLCIGQFQIL 178
Query: 191 AEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTV-LHPC----QYYKVYFFSPSL 245
L L+ N + +SS L LT+ LH C + F +PSL
Sbjct: 179 LLACPALEELDM-----TNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAPSL 233
Query: 246 RTFAFTGTPFETLCGINISSIEHVNFDIHWWCAEYSFILL-----------------SW- 287
F + + E +N+ ++ ++ A+ + +W
Sbjct: 234 VYFYYCDSLAEDYPQVNLKNLVEAQINLLLTQAQIEQVRALNNEMLVADDVFPGLGNAWK 293
Query: 288 -LVNLTNIKSLTVSTSTLQVLF-SIPYLW 314
+ L N++ L +S TL+V F S+ Y W
Sbjct: 294 LITGLRNVQQLYLSPDTLEVSFLSLVYFW 322
>AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21785999-21787444
REVERSE LENGTH=426
Length = 426
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 24 LSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFVS- 82
+S L D ++ HILS + K V T VLSTRW+ LW +LP L L+SL F P F FVS
Sbjct: 2 ISQLPDPLICHILSHLPIKDLVTTRVLSTRWRSLWLWLPCLELNSLYF---PDFNAFVSF 58
Query: 83 --------RLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRL 125
R+ I + G D +G P+ L + AV IQ L
Sbjct: 59 GDKFFDSNRVSCINKFKLYIYGYD---VGVDDPSYLTSWIDAAVKCKIQHL 106
>AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22899724-22901985
FORWARD LENGTH=607
Length = 607
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 19 ENKDRLSDLSDCILLHILSFVKA-KHAVQTCVLSTRWKDLWKYLPTLILHSLD--FSSLP 75
E + RLSDL D +LL ILS + K + T ++S RWK WK +P + D F S
Sbjct: 2 EKQTRLSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDDDDIPFKSFE 61
Query: 76 SFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRI---VKYAVLHNIQRLGLIVTTS 132
+F FV D Q LD HL Q I V+ AV +++ L + +
Sbjct: 62 TFMSFVYGSFLSNDA----QILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFGK 117
Query: 133 DIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAE 192
+E +P C+ + P LP+L TLHL++ F + DG VA
Sbjct: 118 TLE-LPCCLCSCITLKELTLHDLCI---KVVPAWFRLPSLKTLHLLSVKF--SSDGFVAS 171
Query: 193 PFSVLNRLNSLIIEN 207
+ L L+++
Sbjct: 172 ILRICPVLERLVVDG 186
>AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=417
Length = 417
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 17 DEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP- 75
D +DR+S+L + +LL ILS + ++ + T VLS RW+ LWK +P L + DF+ P
Sbjct: 16 DAVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNL---TFDFTFDPK 72
Query: 76 ---SFTKFVSRLLTIRDGSTV-------LQGLDFEHLG-WVQPNLLKRIVK 115
+F++ + R LT + S + +G+D ++G W+ ++ + K
Sbjct: 73 YHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRK 123
>AT3G58940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21781002-21783213 REVERSE LENGTH=618
Length = 618
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF---------- 71
DR+S+L + + HILSF+ KHA T VLS W +LWK+ L + DF
Sbjct: 2 DRVSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKFETNLDIDDSDFLHPEEGKAER 61
Query: 72 -SSLPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVT 130
SF +FV +L ++ G + ++ + + + P+ + R + + + L L
Sbjct: 62 DEIRQSFVEFVDGVLALQ-GDSPIEKFSLKCITGIHPDHVNRWICNVLQRGVSDLYLFTD 120
Query: 131 TSD 133
SD
Sbjct: 121 FSD 123
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Query: 13 SESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFS 72
S+ D +KD +S+L D +L H+LSF+ A T VL+ RW+ L ++P L L ++ +
Sbjct: 3 SKRMDSGSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYD 62
Query: 73 S-----------LPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHN 121
SF FV R++ ++ G+ L+ P+ + V +
Sbjct: 63 RPKMGRRKRLELRKSFKLFVDRVMALQ-GNAPLKKFSLRCKIGSDPSRVNGWVLKVLDRG 121
Query: 122 IQRLGLIVTTSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFD 181
++ L L + + +P + G + T+ LP L TLHL
Sbjct: 122 VEELDLYIASEYEYPLPPKVLMTKTLVSLKVS--GTDEFTIDVGEFFLPKLKTLHLSAIS 179
Query: 182 FCVNDDGVVAEPFSVL 197
F D+G PF+ L
Sbjct: 180 F--GDEG--GPPFAKL 191
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 15/115 (13%)
Query: 17 DEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP- 75
D +DR+S+L + +LL ILS + ++ + T VLS RW+ LWK +P L + DF+ P
Sbjct: 16 DAVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNL---TFDFTFDPK 72
Query: 76 ---SFTKFVSRLLTIRDGSTV-------LQGLDFEHLG-WVQPNLLKRIVKYAVL 119
+F++ + R LT + S + +G+D ++G W+ ++ + K ++
Sbjct: 73 YHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRKLVLV 127
>AT5G18770.1 | Symbols: | F-box/FBD-like domains containing
protein | chr5:6261426-6263172 FORWARD LENGTH=481
Length = 481
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 19 ENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF 71
+D +S L D +L HIL F+ +V T VLS+RW++LWK++P L L++ DF
Sbjct: 21 RGEDMISALPDHLLCHILIFLSTDESVLTSVLSSRWRNLWKWVPRLDLNTSDF 73
>AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:24364049-24365386 FORWARD LENGTH=388
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 22/236 (9%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
DR+S L D +L+ I+SFV K AV T +LS RW+ LWK++P L + P+ F+
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTE----PALRDFI 57
Query: 82 SRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKY----AVLHNIQRLGLIVTTSDIEH- 136
+ L ++ + +++ L +L + + + L + +K A+ H ++ L + +
Sbjct: 58 LKNLPLQ--ARIIESL---YLRFRRESFLFQDIKLWGGIAISHCLRELRIDFFSHYANPY 112
Query: 137 --IPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPF 194
+P ++ G R P+ + LP+L TL L + D +
Sbjct: 113 VILPRSLYTCKSLVTLKLLGLGI--RVDVPRDVCLPSLKTLLLQCVAYSEEDPLRLL--L 168
Query: 195 SVLNRLNSLIIE--NCNLSGAAYILCISSKTLTNLTVLHPCQYYKVYFFSPSLRTF 248
S L L+IE + N + A ++ + + +L + C + +PSL+ F
Sbjct: 169 SCCPVLEDLVIELDDANQNVKALVVIVPTLQCLSLKIPASCSDERYLIVTPSLKYF 224
>AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:17924035-17925843 FORWARD LENGTH=455
Length = 455
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 8 NSRRKSESEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILH 67
S ++ + +D +S L+D ++ +L ++ K AV T VLS+RWK +W +P L L+
Sbjct: 3 ESVKRCRGFSDAREDLMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIPDLDLN 62
Query: 68 SLDFSSLPSFTKFVSRLL 85
S F S +F F+ + +
Sbjct: 63 SSAFPSNNAFVGFIDKFI 80
>AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:137404-138888 FORWARD
LENGTH=441
Length = 441
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 22/243 (9%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDF-----SSLPS 76
D+ S L D +L+ +LSF+ K AV+T +LS RWK LW +LP L DF S
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKL---EYDFRHYSVSEGQG 58
Query: 77 FTKFVSRLLTIRDGSTVLQ---GLDFEHLGWVQPNLLKRIVKYAVLH-NIQRLGLIVTT- 131
+F++ L + L + +G ++P + V AV N++ L L + T
Sbjct: 59 LARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTF 118
Query: 132 -SDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVV 190
+P ++ P+ + LP+L TL L + +D+ +
Sbjct: 119 AERPTKLPKSLYKCKSIVILKLKDEILVD---VPRKVCLPSLKTLFLGRVTY--SDEDSL 173
Query: 191 AEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLH--PCQYYKVYFFSPSLRTF 248
S L L++E + L + K+L LT+ PC + +PSL+
Sbjct: 174 HRLLSNCPVLEDLVVERDRIDNLGK-LSVVVKSLQRLTLKMSCPCHLDGIMMNTPSLKYL 232
Query: 249 AFT 251
T
Sbjct: 233 KVT 235
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 15 SEDEENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLIL 66
SE+ DR+S L D +LL ILSF+ A+ T +LS RWK +WK +PTL L
Sbjct: 8 SEEVSYSDRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDL 59
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 23/247 (9%)
Query: 21 KDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP----- 75
KD +S L D +L ILS + K AV T VLS RWK+++ + L + D S+P
Sbjct: 4 KDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDID--DRQSVPKTKQN 61
Query: 76 ------SFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKY---AVLHNIQRLG 126
++ FV +LL + GS++ + H+G RI + + H + L
Sbjct: 62 RIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLD 121
Query: 127 LIVT-TSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVN 185
+ +T +P IF G+T + + ++LP L TL L + +F V
Sbjct: 122 VFITLKGKSPPVPAMIF-KSKTLVKLRVGRGFTIK--LSQDVSLPLLRTLCLDSVNF-VG 177
Query: 186 DDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYKVYFFSPSL 245
VV S L L++E + +SS +L L + ++ + +P+L
Sbjct: 178 GHNVVGTLISRCPVLEELVVE--ERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNL 235
Query: 246 RTFAFTG 252
+ +G
Sbjct: 236 IYYKHSG 242
>AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:9014082-9015917
FORWARD LENGTH=481
Length = 481
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 9 SRRKSESEDEENK----DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTL 64
R+ S+ N+ +RLS LSD ++ ILS + K V T VLSTRWK++W +P+L
Sbjct: 3 GRKNSKQVRYSNRLILINRLSQLSDPLICQILSHLPIKEVVTTSVLSTRWKNIWLSVPSL 62
Query: 65 ILHSLDFSSLPSFTKFVS 82
L +S P+F F S
Sbjct: 63 ---ELIYSIFPNFNTFRS 77
>AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22939723-22941099
FORWARD LENGTH=402
Length = 402
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 24 LSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLD--------FSSLP 75
+S L D +L+ IL+F+ K A+ T VLS +W+ LW +LP L D S+
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKYDDYDDITDGFNSVSAFQ 63
Query: 76 SFTKFVSRLLTIRDGSTVLQGLDFE-HLGWVQPNLLKRIVKYAVLHNIQRLGLIVTTSDI 134
++ F+++ L + + +++ L G +QP LK V+ AV +++ L ++ +
Sbjct: 64 TYRDFIAKNLPLH-RAPIIESLSLGFRCGTLQPEDLKSWVEVAVSRSVRELSILAYYRNN 122
Query: 135 EHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLN-LPALTTLHLVNFDFCVNDDGVVAEP 193
+ + G+ R P ++ LP+L TL L + D +
Sbjct: 123 YALSSSSLYTCKSLVTLK---GFNIRVDVPPTVCLLPSLRTLELKRVRYLNEDSLRMLLS 179
Query: 194 F-SVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYKVYFFSPSLRTF 248
F VL L+ +N NL G ++ + S +LT C +PSL+ F
Sbjct: 180 FCPVLEYLSIERHDNDNLRGL--VVDVPSLRRLSLTSYTGCSSDDYVIVTPSLKYF 233
>AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20802340
FORWARD LENGTH=492
Length = 492
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLI--LHSLDFSSLPSFTK 79
D++S L D +L+ +LSF+ K AV T +LS RWK LW +LP L S +
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQGLAR 112
Query: 80 FVSRLLTIRDGSTVLQ-GLDFEH--LGWVQPNLLKRIVKYAV-LHNIQRLGL 127
F++ L + + L F + +G ++P + V AV + N++ L L
Sbjct: 113 FITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSL 164
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 135/315 (42%), Gaps = 46/315 (14%)
Query: 21 KDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLIL---------HSLDF 71
+D +S L + I HILSF+ K A T VLS +W+ L+ ++P L L + +
Sbjct: 7 RDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEV 66
Query: 72 SSLPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTT 131
SS SF FV R+L ++ G++ L + V+P+ + + + + L L V
Sbjct: 67 SS--SFMDFVDRVLALQ-GNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYM 123
Query: 132 SDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFP----KSLNLPALTTLHLVNFDFCVNDD 187
P+ +F K L+P + + LP L TL++ D C +
Sbjct: 124 ETEFVFPSEMFLSKTLVRL--------KLMLYPLLEFEDVYLPKLKTLYI---DSCYFEK 172
Query: 188 -GV-VAEPFSVLNRLNSLIIEN---CNLSGAAYILCISSKTLTNLTVLHPCQY---YKVY 239
G+ + + S L L++++ C A+ +S TL LT + V
Sbjct: 173 YGIGLTKLLSGCPILEDLVLDDIPWCTWDFAS----VSVPTLKRLTFSTQVRDEFPKSVS 228
Query: 240 FFSPSLRTFAFTGTPFETLCGINISSIEHVNFDI-----HWWCAEYSFI--LLSWLVNLT 292
+P+L FT T +N S+ + D+ H E + +++ +
Sbjct: 229 IDTPNLVYLKFTDTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDMVGNATDFIMRIC 288
Query: 293 NIKSLTVSTSTLQVL 307
N+K+L +S++TLQVL
Sbjct: 289 NVKTLYLSSNTLQVL 303
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSS 73
KDR+S+L D +LL ILS + V T VLS +W+ LWK +P L S D+ S
Sbjct: 19 GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYES 72
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSS 73
KDR+S+L D +LL ILS + V T VLS +W+ LWK +P L S D+ S
Sbjct: 19 GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYES 72
>AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774074 FORWARD LENGTH=314
Length = 314
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 24/268 (8%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLP------TLILHSLDFSS-- 73
D S L + +L HILSF+ K A T VLS RW++L+ ++P ++ LH +
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 74 ---LPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVT 130
L SF FV R+L + G ++++ + V + + R + + + L L +
Sbjct: 62 EGILQSFMDFVDRVLDLH-GDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 131 TSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVV 190
D+ +P+ + + + K L LP L TL L + C+ ++
Sbjct: 121 FRDLYSLPHEV--GVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLDSCWLCIGQFQIL 178
Query: 191 AEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTV-LHPC----QYYKVYFFSPSL 245
L L+ N + +SS L LT+ LH C + F +PSL
Sbjct: 179 LLACPALEELDM-----TNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAPSL 233
Query: 246 RTFAFTGTPFETLCGINISSIEHVNFDI 273
F + + E +N+ ++ ++
Sbjct: 234 VYFYYCDSLAEDYPQVNLKNLVEAQINL 261
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 19 ENKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSL--PS 76
EN+DR+S+L + +L+HI+S + K V T VLS RW+ +WK + +L F S +
Sbjct: 8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWK-----TVQNLKFVSKYHQT 62
Query: 77 FTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGL 127
F++ V R + L+ LD E + + L +V A +++ L L
Sbjct: 63 FSEDVYRFFMLHKAP-FLESLDLEFSNQLDASDLGILVGIAFARHVRNLVL 112
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 23/247 (9%)
Query: 21 KDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP----- 75
KD +S L D +L ILS + K AV T VLS RWK+++ + L + D S+P
Sbjct: 4 KDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDID--DRQSVPKTKQN 61
Query: 76 ------SFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKY---AVLHNIQRLG 126
++ FV +LL + GS++ + H+G RI + + H + L
Sbjct: 62 RIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLD 121
Query: 127 LIVT-TSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVN 185
+ +T +P IF G+T + + ++LP L TL L + +F V
Sbjct: 122 VFITLKGKSPPVPAMIF-KSKTLVKLRVGRGFTIK--LSQDVSLPLLRTLCLDSVNF-VG 177
Query: 186 DDGVVAEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQYYKVYFFSPSL 245
VV S L L++E + +SS +L L + ++ + +P+L
Sbjct: 178 GHNVVGTLISRCPVLEELVVEERRC--VDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNL 235
Query: 246 RTFAFTG 252
+ +G
Sbjct: 236 IYYKHSG 242
>AT5G22700.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7545653-7547307
REVERSE LENGTH=437
Length = 437
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
DR+S L D +L ILS + K+AV T +LSTRW+ +W P L + F +F F
Sbjct: 6 DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 65
Query: 82 SRLLTIRDGSTVLQ-GLDFEH--------LGWVQPNLLKRI 113
SR L S + + L E + W+Q + +RI
Sbjct: 66 SRFLEFSKDSCLHKFKLSVERDDVDMCTIMPWIQDAVNRRI 106
>AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774620 FORWARD LENGTH=465
Length = 465
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 24/268 (8%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLP------TLILHSLDFSS-- 73
D S L + +L HILSF+ K A T VLS RW++L+ ++P ++ LH +
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 74 ---LPSFTKFVSRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVT 130
L SF FV R+L + G ++++ + V + + R + + + L L +
Sbjct: 62 EGILQSFMDFVDRVLDLH-GDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFID 120
Query: 131 TSDIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVV 190
D+ +P+ + + + K L LP L TL L + C+ ++
Sbjct: 121 FRDLYSLPHEV--GVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVLDSCWLCIGQFQIL 178
Query: 191 AEPFSVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTV-LHPC----QYYKVYFFSPSL 245
L L+ N + +SS L LT+ LH C + F +PSL
Sbjct: 179 LLACPALEELDMT-----NTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAPSL 233
Query: 246 RTFAFTGTPFETLCGINISSIEHVNFDI 273
F + + E +N+ ++ ++
Sbjct: 234 VYFYYCDSLAEDYPQVNLKNLVEAQINL 261
>AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20801788
FORWARD LENGTH=364
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLI--LHSLDFSSLPSFTK 79
D++S L D +L+ +LSF+ K AV T +LS RWK LW +LP L S +
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQGLAR 112
Query: 80 FVSRLLTIRDGSTVLQ-GLDFEH--LGWVQPNLLKRIVKYAV-LHNIQRLGL 127
F++ L + + L F + +G ++P + V AV + N++ L L
Sbjct: 113 FITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSL 164
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP---- 75
++DR+S L + ++ HILSF+ K A T VLS +W+ L+ Y+ L D+
Sbjct: 5 SRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSD 64
Query: 76 -----SFTKFVSRLLTIRDGSTV 93
SF +FV R+L ++ +V
Sbjct: 65 VELSRSFMEFVDRVLALQGNGSV 87
>AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18160600-18162058
FORWARD LENGTH=435
Length = 435
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 20 NKDRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFS---SLPS 76
++D +S+L D +L IL ++ K +V+T VLS RW++LW +P L L +L F+
Sbjct: 2 DRDYISELPDSLLTQILLELRTKDSVKTSVLSKRWRNLWLNVPGLELFTLQFTYPDREEI 61
Query: 77 FTKFVSRLLTIRDGSTVLQGLDFEHLGWVQ----PNLLKRIVKYAVLHNIQRLGLIVTTS 132
F +F+ R + + S + + + + +V + L ++ V H +Q L + + T
Sbjct: 62 FVRFMDRFMEFKCRSRLKKFM----ITYVDCKGYRDRLMELIGTLVDHGLQHLYVFMHTF 117
Query: 133 DIEHIPNCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDG-VVA 191
D K + F ++LP L L L N C +DG +V
Sbjct: 118 DRVDFKRQNIYKSKTLVSLKLHNVELKNSDF--VVSLPCLKILKLEN--ICHGEDGPLVV 173
Query: 192 EPF----SVLNRLNSLIIENCNLSGAAYILCISSKTLTNLTVLHPCQY-----YKVYFFS 242
E SVL L + + +L +SS+TL + T LH Y + V +
Sbjct: 174 EKLISGCSVLEDLELIRPFDIRTHKVLLLLRVSSQTLKSFT-LHFAIYKDRTDFSVEIDA 232
Query: 243 PSLRTFAFTGTPFETLCGINISSI 266
P L+ + +++ N+SS+
Sbjct: 233 PRLKYMTVEQSQSDSIVVKNLSSL 256
>AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15366432-15368053 FORWARD LENGTH=456
Length = 456
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSFTKFV 81
D LS+L +L HILSF+ K A T VLS RW++L ++P + + D L F FV
Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDHDIREL--FMDFV 59
Query: 82 SRLLTIRDGSTV------LQGLDFEHLG-WVQPNLLKRI 113
R+L ++ S + G+D + + W+Q +++ +
Sbjct: 60 DRVLALQGNSPINKFSLDCSGVDSDRVDCWIQNVMVRGV 98
>AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:15824938-15826391 REVERSE LENGTH=427
Length = 427
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 29/299 (9%)
Query: 27 LSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP-----SFTKFV 81
L D +L+ IL + K AV T VLS RW+ L+ L H S P SF FV
Sbjct: 4 LPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHD-PISGRPEDILKSFNDFV 62
Query: 82 SRLLTIRDGSTVLQGLDFEHLGWVQPNLLKRIVKYAVLHNIQRLGLIVTTSD---IEHIP 138
L + G + + + + ++L R + A+ H + L L + + IP
Sbjct: 63 DSSLAFQGGKHIKKFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHLMHESWPWLFSIP 122
Query: 139 NCIFXXXXXXXXXXXXYGYTKRTLFPKSLNLPALTTLHLVNFDFCVNDDGVVAEPFSVLN 198
+ +F Y FP +LPAL L L + F DD + +
Sbjct: 123 SKVFNSSTLVKLSLGSRLYCPS--FPPDTSLPALKVLLLDSILF--RDDQLSNVFLAACP 178
Query: 199 RLNSLIIENCNLSGAAYILC-ISSKTLTNLTVLHPCQYYKVYFF----SPSLRTFAFTGT 253
L L I + Y C ISSK++ L++ YY + +PS+ ++ +
Sbjct: 179 ALEDLTIHH------TYHPCVISSKSIKKLSLSVNSGYYGAGYILTLDTPSVVDLYYSDS 232
Query: 254 PFETLCGINISSIEHVNFDIHW-----WCAEYSFILLSWLVNLTNIKSLTVSTSTLQVL 307
P ++ S+ V D+H+ + + + + + N+K+L ++ ST++V+
Sbjct: 233 PRHNAPLFHLDSLAKVTLDLHFIENNNREVQNDADVKNLIREICNVKTLHLTCSTVEVI 291
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 19 ENKDRLSDL-SDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLPSF 77
ENKD +S L D +L IL + K +V+T +LSTRW+ +W+ +P L L+ +F
Sbjct: 2 ENKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTNF-RYKGL 60
Query: 78 TKFVSRLLTIRDGSTVLQ-GLDFEHLGW-VQPNLLKRIVKYAVLHNIQRL 125
FV+R L + S + Q L+F+ + + +L + V V +Q L
Sbjct: 61 KGFVNRFLDLDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQHL 110
>AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr2:17785653-17787211 FORWARD LENGTH=443
Length = 443
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 22 DRLSDLSDCILLHILSFVKAKHAVQTCVLSTRWKDLWKYLPTLILHSLDFSSLP----SF 77
DR+S L D IL HILSF+ K A T LSTRWK+++ ++P+L L P F
Sbjct: 2 DRISSLPDEILEHILSFLSTKEAALTSSLSTRWKNVFVFVPSLHLDYARQHENPREFIDF 61
Query: 78 TKFVSRLLTIRDGSTVLQGL 97
FV+ L R G++ ++ L
Sbjct: 62 VDFVNTLFN-RKGNSPIKKL 80