Miyakogusa Predicted Gene

Lj0g3v0335949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335949.1 Non Chatacterized Hit- tr|B9FDR6|B9FDR6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,83.33,0.00000002, ,CUFF.22960.1
         (67 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21480.1 | Symbols:  | Exostosin family protein | chr1:751911...   126   4e-30
AT1G21480.2 | Symbols:  | Exostosin family protein | chr1:751937...   125   4e-30

>AT1G21480.1 | Symbols:  | Exostosin family protein |
           chr1:7519116-7521426 REVERSE LENGTH=462
          Length = 462

 Score =  126 bits (316), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/61 (88%), Positives = 59/61 (96%)

Query: 1   MMGGLNDKEINHTYVKVISQMPYFRLSGGRDHIFVFPSGAGAHLFKSWATYINRSIILTP 60
           M+GGLNDKEIN TYVKV+SQMPYFR SGGRDHIFVFPSGAGAHLF+SW+T+INRSIILTP
Sbjct: 160 MLGGLNDKEINQTYVKVLSQMPYFRRSGGRDHIFVFPSGAGAHLFRSWSTFINRSIILTP 219

Query: 61  E 61
           E
Sbjct: 220 E 220


>AT1G21480.2 | Symbols:  | Exostosin family protein |
           chr1:7519372-7521426 REVERSE LENGTH=410
          Length = 410

 Score =  125 bits (315), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/61 (88%), Positives = 59/61 (96%)

Query: 1   MMGGLNDKEINHTYVKVISQMPYFRLSGGRDHIFVFPSGAGAHLFKSWATYINRSIILTP 60
           M+GGLNDKEIN TYVKV+SQMPYFR SGGRDHIFVFPSGAGAHLF+SW+T+INRSIILTP
Sbjct: 160 MLGGLNDKEINQTYVKVLSQMPYFRRSGGRDHIFVFPSGAGAHLFRSWSTFINRSIILTP 219

Query: 61  E 61
           E
Sbjct: 220 E 220