Miyakogusa Predicted Gene

Lj0g3v0335759.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335759.1 tr|F4DFJ9|F4DFJ9_AERVB Galactokinase OS=Aeromonas
veronii (strain B565) GN=galK PE=3 SV=1,27.4,2e-18,seg,NULL; Ribosomal
protein S5 domain 2-like,Ribosomal protein S5 domain 2-type fold; GHMP
Kinase, C,CUFF.23059.1
         (495 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16130.1 | Symbols: ARA1, ISA1, ATISA1 | arabinose kinase | c...   704   0.0  
AT3G42850.1 | Symbols:  | Mevalonate/galactokinase family protei...   633   0.0  

>AT4G16130.1 | Symbols: ARA1, ISA1, ATISA1 | arabinose kinase |
            chr4:9120875-9127656 FORWARD LENGTH=1039
          Length = 1039

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/477 (71%), Positives = 388/477 (81%), Gaps = 2/477 (0%)

Query: 1    MGGIADYSGSLVLQMPIKEACHVALQRVHPSKHRLWKHAEARQNDKGGNPTAVLQIVSYG 60
            MGGIADYSGSLVLQMPI+EACHVA+QR  P KHRLWKHA+ARQ  KG  PT VLQIVSYG
Sbjct: 561  MGGIADYSGSLVLQMPIREACHVAVQRNLPGKHRLWKHAQARQQAKGQVPTPVLQIVSYG 620

Query: 61   SELGNRGPTFDMDLSDFIEEGRPISYEKAKKYFAQDPSQKWAAYVAGAIVVLMTELDVRF 120
            SE+ NR PTFDMDLSDF++   PISYEKA+K+FAQDP+QKWAAYVAG I+VLM EL VRF
Sbjct: 621  SEISNRAPTFDMDLSDFMDGDEPISYEKARKFFAQDPAQKWAAYVAGTILVLMIELGVRF 680

Query: 121  EDSISVLVSSAVPEGKGXXXXXXXXXXXXXXXXXXHGLNISPRDLALLCQKVENHIVGAP 180
            EDSIS+LVSSAVPEGKG                  HGL+I PRDLA+LCQKVENHIVGAP
Sbjct: 681  EDSISLLVSSAVPEGKGVSSSAAVEVASMSAIAAAHGLSIDPRDLAILCQKVENHIVGAP 740

Query: 181  CGVMDQMTSACGEANKLLAMICQPAEIVGLVEIPSHIRVWGIDSGIRHSVGGADYGSVRI 240
            CGVMDQMTS+CGEANKLLAMICQPAE+VGLVEIP+H+R WGIDSGIRHSVGGADY SVR+
Sbjct: 741  CGVMDQMTSSCGEANKLLAMICQPAEVVGLVEIPNHVRFWGIDSGIRHSVGGADYRSVRV 800

Query: 241  GTFMGMKMIKS-KASEELSQMCAANGLNYEEVEQDDIELLKQEASLDYLCNLSPHRFEAL 299
            G +MG KMIKS  +S       +ANG N EE+E + I+LL+ EASLDYLCNLSPHR+EA 
Sbjct: 801  GAYMGRKMIKSMASSILSPSASSANGGNPEELEDEGIDLLEAEASLDYLCNLSPHRYEAR 860

Query: 300  YAKTIPDSIVGETFLAQYKNHNDPVTIIDEKCSYGVRAPTVHPIYENFRVKTFKALLTSA 359
            YA  +PD ++G+TF+ +Y +H+DPVT+ID+K SY V+AP  HPIYENFRVKTFKALLTSA
Sbjct: 861  YADKLPDIMLGQTFIEEYADHDDPVTVIDQKRSYSVKAPARHPIYENFRVKTFKALLTSA 920

Query: 360  SSTDQLTVLGGLLYQCHYSYSACGLGSDGTDRLVHLVQELQHSATSKSEGGTLYGAKXXX 419
            +S +QLT LGGLLYQCHYSYSACGLGSDGT+RLV LVQ +QH+  S SE GTLYGAK   
Sbjct: 921  TSDEQLTALGGLLYQCHYSYSACGLGSDGTNRLVQLVQGMQHN-KSNSEDGTLYGAKITG 979

Query: 420  XXXXXXXXXXXRNCLKSSEQIFEIQQRYKKATGYLPFIFEGSSPGAGKFGYLKLRRR 476
                       RN L+SS+QI EIQQRYK ATGYLP IFEGSSPGAGKFGYL++RRR
Sbjct: 980  GGSGGTVCVVGRNSLRSSQQILEIQQRYKAATGYLPLIFEGSSPGAGKFGYLRIRRR 1036


>AT3G42850.1 | Symbols:  | Mevalonate/galactokinase family protein |
           chr3:14940114-14945291 REVERSE LENGTH=964
          Length = 964

 Score =  633 bits (1633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/480 (64%), Positives = 366/480 (76%), Gaps = 11/480 (2%)

Query: 1   MGGIADYSGSLVLQMPIKEACHVALQRVHPSKHRLWKHAEARQNDKGGNPTAVLQIVSYG 60
           MGGIADYSGSLVL MP +EACH A+QR HPSK +LWKHAEAR + +    T +L+IVS+G
Sbjct: 495 MGGIADYSGSLVLLMPTREACHAAVQRNHPSKQKLWKHAEARHHSRD---TPILEIVSFG 551

Query: 61  SELGNRGPTFDMDLSDFIEE-GRPISYEKAKKYFAQDPSQKWAAYVAGAIVVLMTELDVR 119
           SEL NRGPTFDMDLSDF+EE G+PISY+KA  YF++DPSQKWAAYVAG I+VLM E+DVR
Sbjct: 552 SELSNRGPTFDMDLSDFMEEDGKPISYDKAYHYFSRDPSQKWAAYVAGTILVLMREMDVR 611

Query: 120 FEDSISVLVSSAVPEGKGXXXXXXXXXXXXXXXXXXHGLNISPRDLALLCQKVENHIVGA 179
           FEDSIS+LVSS VPEGKG                  HGL ISPRD+ALLCQKVEN++VGA
Sbjct: 612 FEDSISILVSSTVPEGKGVSSSASVEVATMSAVAAAHGLEISPRDVALLCQKVENYVVGA 671

Query: 180 PCGVMDQMTSACGEANKLLAMICQPAEIVGLVEIPSHIRVWGIDSGIRHSVGGADYGSVR 239
           PCGVMDQM SACGEANKLLAMICQPAEI+GLVEIPSHIR WGIDSGIRHSVGG+DYGSVR
Sbjct: 672 PCGVMDQMASACGEANKLLAMICQPAEILGLVEIPSHIRFWGIDSGIRHSVGGSDYGSVR 731

Query: 240 IGTFMGMKMIKSKASEELSQMCAANGLNYEEVEQDDIELLKQEASLDYLCNLSPHRFEAL 299
           IG F+G  MI+S A+               E+ + D        SLDYLCNLSPHRF+AL
Sbjct: 732 IGAFIGKTMIRSFAASFAETNSEEAEEESSELIESD-------TSLDYLCNLSPHRFQAL 784

Query: 300 YAKTIPDSIVGETFLAQYKNHNDPVTIIDEKCSYGVRAPTVHPIYENFRVKTFKALLTSA 359
           YA  +P SI GE FL +Y +H D VT ID+  +Y + APT HPIYENFRV+ FKALLT+ 
Sbjct: 785 YASKLPQSITGEEFLEKYGDHGDSVTTIDKDGTYAIMAPTRHPIYENFRVQAFKALLTAT 844

Query: 360 SSTDQLTVLGGLLYQCHYSYSACGLGSDGTDRLVHLVQELQHSATSKSEGGTLYGAKXXX 419
            S +Q+  LG L+YQCH SYSACG+GSDGTDRLV LVQ +++  +SK+E GTLYGAK   
Sbjct: 845 PSEEQVIGLGELMYQCHDSYSACGIGSDGTDRLVRLVQNMENLKSSKTENGTLYGAKITG 904

Query: 420 XXXXXXXXXXXRNCLKSSEQIFEIQQRYKKATGYLPFIFEGSSPGAGKFGYLKLRRRAAT 479
                      ++ L+SSEQI +IQQ+YK+ATG++P++FEGSSPGAGKFGYLK+R+ +AT
Sbjct: 905 GGSGGTVCVIGKSSLRSSEQILQIQQKYKEATGFMPYVFEGSSPGAGKFGYLKIRKNSAT 964