Miyakogusa Predicted Gene

Lj0g3v0335449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0335449.1 Non Chatacterized Hit- tr|I3SB82|I3SB82_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,76.47,0.00000000001,no description,NAD(P)-binding
domain,CUFF.22912.1
         (59 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65205.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    62   1e-10
AT5G10050.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    57   3e-09

>AT5G65205.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:26050926-26052017 REVERSE LENGTH=285
          Length = 285

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           M  AVVPHMA++K+GKIVNIGS S +A GP +  Y  S  ALHA+TDT R  
Sbjct: 119 MTQAVVPHMASKKKGKIVNIGSISIMAPGPWAGVYTASKAALHALTDTLRLE 170


>AT5G10050.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr5:3144254-3145643 FORWARD LENGTH=279
          Length = 279

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 1   MVVAVVPHMATRKQGKIVNIGSNSALASGPRSSAY--SNDALHAMTDTSRFS 50
           M  AVVPHM ++K+GKIVN+GS + +A GP +  Y  +  A+HA+TDT R  
Sbjct: 118 MTQAVVPHMVSKKKGKIVNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLE 169