Miyakogusa Predicted Gene
- Lj0g3v0335209.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0335209.1 Non Chatacterized Hit- tr|F6HXG9|F6HXG9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.9,1e-17,VQ,VQ; seg,NULL,CUFF.22903.1
(262 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28280.1 | Symbols: | VQ motif-containing protein | chr1:988... 107 7e-24
AT1G28280.2 | Symbols: | VQ motif-containing protein | chr1:988... 107 7e-24
AT5G53830.1 | Symbols: | VQ motif-containing protein | chr5:218... 99 3e-21
AT3G15300.1 | Symbols: | VQ motif-containing protein | chr3:514... 98 6e-21
AT2G33780.1 | Symbols: | VQ motif-containing protein | chr2:142... 58 5e-09
>AT1G28280.1 | Symbols: | VQ motif-containing protein |
chr1:9886652-9887395 REVERSE LENGTH=247
Length = 247
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 79 RSDSNNPYPTTFVQADTTTFKHVVQMLTGXXXXXXXXXXXXXXXXXXX---XXXXRNFNI 135
RS+S NPYPTTFVQADT++FK VVQMLTG +F+I
Sbjct: 48 RSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSI 107
Query: 136 PPIKTAPIKKQ------GFKLYERRNSLKNNLILNTMMPNXXXXXXXXXPRQAAEXXXXX 189
PPIK P KKQ GF+LYERRNS+K NL +N + P PR+ E
Sbjct: 108 PPIKAVPNKKQSSSSASGFRLYERRNSMK-NLKINPLNPVFNPVNSAFSPRK-PEILSPS 165
Query: 190 XXXXXXXXXXXVTPLNDDALGNSSSS--------EEDKAIAEKGFYLHPSPVSTPRD 238
VTPL D S SS E+KA+ E+GFYLHPSP +TP D
Sbjct: 166 ILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMD 222
>AT1G28280.2 | Symbols: | VQ motif-containing protein |
chr1:9886297-9887395 REVERSE LENGTH=243
Length = 243
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 79 RSDSNNPYPTTFVQADTTTFKHVVQMLTGXXXXXXXXXXXXXXXXXXX---XXXXRNFNI 135
RS+S NPYPTTFVQADT++FK VVQMLTG +F+I
Sbjct: 48 RSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSI 107
Query: 136 PPIKTAPIKKQ------GFKLYERRNSLKNNLILNTMMPNXXXXXXXXXPRQAAEXXXXX 189
PPIK P KKQ GF+LYERRNS+K NL +N + P PR+ E
Sbjct: 108 PPIKAVPNKKQSSSSASGFRLYERRNSMK-NLKINPLNPVFNPVNSAFSPRK-PEILSPS 165
Query: 190 XXXXXXXXXXXVTPLNDDALGNSSSS--------EEDKAIAEKGFYLHPSPVSTPRD 238
VTPL D S SS E+KA+ E+GFYLHPSP +TP D
Sbjct: 166 ILDFPSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMD 222
>AT5G53830.1 | Symbols: | VQ motif-containing protein |
chr5:21857057-21857788 FORWARD LENGTH=243
Length = 243
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 87/185 (47%), Gaps = 34/185 (18%)
Query: 84 NPYPTTFVQADTTTFKHVVQMLTGXXXXXXXXXXXXXXXXXXXXXXXRNFNIPPIKTAPI 143
NPYPTTFVQADT+TFK VVQMLTG +F+IPPIK
Sbjct: 45 NPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIK---- 100
Query: 144 KKQGFKLYERRNS-----LKNNLILNT--------MMPNXXXXXXXXXPRQAAEXXXXXX 190
K FKLYERR + KN+L++NT +M PR +
Sbjct: 101 KTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSE 160
Query: 191 XXXXXXXX---------XXVTPL--NDDALGNSS------SSEEDKAIAEKGFYLHPSPV 233
VTPL NDD SS SSEEDKAIA+KGFYLHPSPV
Sbjct: 161 NILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPV 220
Query: 234 STPRD 238
STPRD
Sbjct: 221 STPRD 225
>AT3G15300.1 | Symbols: | VQ motif-containing protein |
chr3:5147551-5148210 REVERSE LENGTH=219
Length = 219
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 23/176 (13%)
Query: 79 RSDSNNPYPTTFVQADTTTFKHVVQMLTGXXXXXXXXXXXXXXXXXXXXXXXRNFNIPPI 138
RSD YPTTFVQAD+++FK VVQMLTG NF IPPI
Sbjct: 31 RSDH---YPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKG----NFVIPPI 83
Query: 139 KTA-PIKKQGFKLYERR------NSLKNNLILNTMM-PNXXXXXXXXXPRQAAEXXXXXX 190
KTA P K G KLYERR N+LKN+L++NT+M PR
Sbjct: 84 KTAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCL 143
Query: 191 XXXXXXXXXXVTPLNDDALGN--------SSSSEEDKAIAEKGFYLHPSPVSTPRD 238
VTPL GN S SEE++ IA+KG+YLH SP+STPRD
Sbjct: 144 DFPKLALNSPVTPLKQGTNGNEGDPFDKMSPLSEEERGIADKGYYLHRSPISTPRD 199
>AT2G33780.1 | Symbols: | VQ motif-containing protein |
chr2:14291117-14291731 REVERSE LENGTH=204
Length = 204
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 70/168 (41%), Gaps = 36/168 (21%)
Query: 86 YPTTFVQADTTTFKHVVQMLTGXXXXXXXXXXXXXXXXXXXXXXXRNFNIPPIKTAPIKK 145
Y TTF++ D ++FK VVQ+LTG +IPPIK KK
Sbjct: 34 YETTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFH---------SIPPIKAVTNKK 84
Query: 146 Q--GFKLYERRNSLKNNLILNTMMPNXXXXXXXXXPRQAAEXXXXXXXXXXXXXXXXVTP 203
Q F+L ERRNS+K+ L +N E TP
Sbjct: 85 QSSSFRLSERRNSMKHYLNINPTH------------SGPPEILTPTILNFPALDLSPDTP 132
Query: 204 LNDDAL---GNSSSS----------EEDKAIAEKGFYLHPSPVSTPRD 238
L D G+ S S +++++I EKGFYL PSP +TPRD
Sbjct: 133 LMSDPFYRPGSFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRD 180