Miyakogusa Predicted Gene

Lj0g3v0334939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334939.1 tr|I1JED0|I1JED0_SOYBN UDP-glucose
6-dehydrogenase OS=Glycine max PE=3 SV=1,77.14,0.0000005,no
description,NAD(P)-binding domain,CUFF.22875.1
         (38 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15490.1 | Symbols:  | UDP-glucose 6-dehydrogenase family pro...    57   2e-09
AT5G39320.1 | Symbols:  | UDP-glucose 6-dehydrogenase family pro...    55   1e-08
AT1G26570.1 | Symbols: UGD1, ATUGD1 | UDP-glucose dehydrogenase ...    52   1e-07
AT3G29360.2 | Symbols:  | UDP-glucose 6-dehydrogenase family pro...    49   7e-07
AT3G29360.1 | Symbols:  | UDP-glucose 6-dehydrogenase family pro...    49   7e-07
AT3G01010.1 | Symbols:  | UDP-glucose/GDP-mannose dehydrogenase ...    48   1e-06

>AT5G15490.1 | Symbols:  | UDP-glucose 6-dehydrogenase family
           protein | chr5:5027872-5029314 REVERSE LENGTH=480
          Length = 480

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/36 (66%), Positives = 32/36 (88%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFKKLD+Q+++EN+Q  P F+FDG+NVVD +KLRE
Sbjct: 423 DEFKKLDFQRIFENMQK-PAFVFDGRNVVDADKLRE 457


>AT5G39320.1 | Symbols:  | UDP-glucose 6-dehydrogenase family
           protein | chr5:15743254-15744696 FORWARD LENGTH=480
          Length = 480

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 32/36 (88%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK LDYQK+++N+Q  P FIFDG+N+++VNKLRE
Sbjct: 423 DEFKSLDYQKIFDNMQK-PAFIFDGRNIMNVNKLRE 457


>AT1G26570.1 | Symbols: UGD1, ATUGD1 | UDP-glucose dehydrogenase 1 |
           chr1:9182801-9184246 FORWARD LENGTH=481
          Length = 481

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/36 (61%), Positives = 30/36 (83%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK LD++K+++N+Q P  F+FDG+NVVD  KLRE
Sbjct: 424 DEFKSLDFKKIFDNMQKP-AFVFDGRNVVDAVKLRE 458


>AT3G29360.2 | Symbols:  | UDP-glucose 6-dehydrogenase family
           protein | chr3:11267375-11268817 REVERSE LENGTH=480
          Length = 480

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 31/36 (86%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK LD+QK+++N+Q  P F+FDG+N++++ KLRE
Sbjct: 423 DEFKNLDFQKIFDNMQK-PAFVFDGRNIMNLQKLRE 457


>AT3G29360.1 | Symbols:  | UDP-glucose 6-dehydrogenase family
           protein | chr3:11267375-11268817 REVERSE LENGTH=480
          Length = 480

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 31/36 (86%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DEFK LD+QK+++N+Q  P F+FDG+N++++ KLRE
Sbjct: 423 DEFKNLDFQKIFDNMQK-PAFVFDGRNIMNLQKLRE 457


>AT3G01010.1 | Symbols:  | UDP-glucose/GDP-mannose dehydrogenase
           family protein | chr3:4342-4818 FORWARD LENGTH=158
          Length = 158

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 29/36 (80%), Gaps = 1/36 (2%)

Query: 3   DEFKKLDYQKVYENVQSPPTFIFDGQNVVDVNKLRE 38
           DE+K LDY++++EN+Q  P F+FDG+NV D  KLR+
Sbjct: 103 DEYKTLDYERIFENMQK-PAFVFDGRNVFDAEKLRK 137