Miyakogusa Predicted Gene
- Lj0g3v0334709.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0334709.1 tr|G7I2P3|G7I2P3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_1g0,77.06,0,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAIN,CUFF.22847.1
(630 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 361 1e-99
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 360 1e-99
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 3e-99
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 355 6e-98
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 353 1e-97
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 6e-91
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 330 2e-90
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 5e-90
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 2e-89
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 3e-89
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 9e-88
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 2e-87
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 5e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 318 8e-87
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 9e-87
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 316 4e-86
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 7e-85
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 311 8e-85
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 3e-84
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 5e-84
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 4e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 302 5e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 1e-81
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 301 1e-81
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 299 5e-81
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 296 3e-80
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 295 5e-80
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 9e-80
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 294 1e-79
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 294 1e-79
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 294 1e-79
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 293 2e-79
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 3e-78
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 288 9e-78
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 5e-77
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 285 6e-77
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 6e-77
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 281 1e-75
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 5e-75
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 5e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 277 2e-74
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 2e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 5e-74
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 271 8e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 270 2e-72
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 3e-72
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 8e-72
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 2e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 266 4e-71
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 9e-71
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 262 6e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 259 3e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 256 3e-68
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 253 3e-67
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 9e-65
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 241 1e-63
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 3e-63
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 238 1e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 230 2e-60
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 7e-60
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 228 1e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 1e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 1e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 206 4e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 8e-52
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 9e-51
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 101 1e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 87 2e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 81 3e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 3e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 70 3e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 4e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 69 8e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 66 6e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 66 7e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 66 8e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 65 1e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 2e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 64 4e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 3e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 50 3e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 4e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 6e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 361 bits (926), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 329/586 (56%), Gaps = 27/586 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
+ +Q HA L G N F+ LV+ Y G L S+++ S +++ WN++++
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+N + AL REM + V PD++T++++ L+ L GK + +
Sbjct: 279 QNEQLLEALEYLREMVL----EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 162 XXXXXANSVMA-MYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
S + MY C + +VFD M R +G +N MI+G++ L
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ----NEHDKEALL 390
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F + G A++ T+A ++P C ++G + +H ++VK GLD D + ++
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACV-RSGAFSRKEAIHGFVVKRGLD----RDRFVQNT 445
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ------- 333
L+DMYSR K+ ++ R+F +M+ R+L W MI GYV + EDAL+LL +MQ
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 334 ---MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKC 390
+ ++PN ++L+++LP+CA L L GK+IHA++ K L D ++ +AL+DMY+KC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 391 GSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
G L + +VFD + ++ ITW+ +I AYG+HG G+EA+ + M+ G+KP+ +T +SV
Sbjct: 566 GCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDP 510
+ACS SG+VDEG+ I+ + Y ++P+ + ACVVD+LGR+G++ +A + + MP D
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 511 GPS-VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVR 569
+ W SLL AS +H N ++A + L++LEP S+Y+ L+N Y+S WD TEVR
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 570 TMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
MKE+G++K PG SWI H F GD +HP S + L+ L
Sbjct: 745 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 252/549 (45%), Gaps = 35/549 (6%)
Query: 22 ITPHN--LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPF-LTTRLVSAYATSGDLNMS 78
I P N LL+ D + L +Q HA + G+ + + LV+ Y GD
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 79 RLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKV 138
VF I +N WNSLI+ ++ AL FR M + V P +TL ++
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN----VEPSSFTLVSVVTA 208
Query: 139 SGEL---QDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNV 195
L + L+ GK + N+++AMY + G+ + + R++
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 196 GSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYG 255
++N ++S + R M EG D FTI+S+LP C G
Sbjct: 268 VTWNTVLSSLCQNEQLLEALE-----YLREMVLEGVEPDEFTISSVLPA-CSHLEMLRTG 321
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
+ELH Y +KNG + + +GS+L+DMY K+++ RRVFD M R + +W AMI G
Sbjct: 322 KELHAYALKNG---SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 316 YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG 375
Y QN ++AL+L M+ G+ N ++ V+PAC G + IH F K L+
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
D + N L+DMYS+ G +D A R+F + RD +TW++MI+ Y E+A++ KM
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 436 LQL-----------GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
L +KP+ IT++++L +C+ + +G I+ I + + V + +
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGS 556
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTR-DLAYRCLLELEP 543
+VDM + G L + + +P W ++ A MHGN DL +++
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 544 ENPSNYISL 552
N +IS+
Sbjct: 616 PNEVTFISV 624
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
+SR+ W ++ V++ +A++ +M + G++P+ + ++L A A L + +G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELG 116
Query: 362 KQIHAFSTKVELNGDT-SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
KQIHA K D+ ++ N L+++Y KCG +VFD +S R+ ++W+S+IS+
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-RNQVSWNSLISSLC 175
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
+ E A+ ++ ML ++P T+VSV++ACS
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 332/592 (56%), Gaps = 22/592 (3%)
Query: 35 VDHRAHRLT-QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLW 93
+D H+ +Q HA++L G + FL T+L+ A ++ GD+ +R VF + ++ W
Sbjct: 28 IDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPW 87
Query: 94 NSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPG 153
N++I GY +N F AL+++ M + V PD +T + K L L G+ +
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLAR----VSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 154 KSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFD--EMPQRNVGSFNVMISGWASLGNF 211
+ N ++A+Y++C G A VF+ +P+R + S+ ++S +A G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE- 202
Query: 212 ASTSGGDLWCFFRRMQCEGYNADAFTIASLL-PVCCGKTGKWDYGRELHCYLVKNGLDLK 270
+++ R+M + D + S+L C + K GR +H +VK GL++
Sbjct: 203 -PMEALEIFSQMRKMDVK---PDWVALVSVLNAFTCLQDLK--QGRSIHASVVKMGLEI- 255
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLR 330
+ L SL MY++ ++ ++ +FD+MKS NL +W AMI+GY +NG +A+ +
Sbjct: 256 ---EPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 331 EMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKC 390
EM KD +RP+ +S+ S + ACA +G L + ++ + + + D + +ALIDM++KC
Sbjct: 313 EMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 391 GSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
GS++ A VFD + RD + WS+MI YGLHGR EA+ Y+ M + G+ P+ +T + +
Sbjct: 372 GSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDP 510
L AC+ SG+V EG +N + +++ P + ACV+D+LGR+G LDQA E IK MP+ P
Sbjct: 431 LMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 511 GPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRT 570
G +VWG+LL+A H + + A + L ++P N +Y+ LSN YA+ + WD V EVR
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 571 MMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDG 622
MKE+GL K G SW+ + G +F VGDK+HP I ++ + + + +G
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEG 601
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 328/623 (52%), Gaps = 52/623 (8%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
R + HA L GF N F+ LV+ Y+ L+ +R VF + +V WNS+I Y
Sbjct: 144 RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
K + AL +F M G PD+ TL + L GK + +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFG---CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
N ++ MY++CG +A VF M ++V S+N M++G++ +G F D
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE-----DAV 315
Query: 221 CFFRRMQCEGYNADAFTIASL-------------LPVC---------------------C 246
F +MQ E D T ++ L VC C
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 247 GKTGKWDYGRELHCYLVKNGLDLKM---GSDVHLGSSLIDMYSRSKKLVLSRRVFDQM-- 301
G +G+E+HCY +K +DL+ G + + + LIDMY++ KK+ +R +FD +
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD-GMRPNKVSLISVLPACALLGGLIV 360
K R++ WT MI GY Q+G AL LL EM +D RPN ++ L ACA L L +
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 361 GKQIHAFSTKVELNGDTSLF--NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
GKQIHA++ + + N LF N LIDMY+KCGS+ A VFDN+ ++ +TW+S+++
Sbjct: 496 GKQIHAYALRNQQNA-VPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTG 553
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
YG+HG GEEA+ + +M ++G K D +T++ VL ACS SG++D+GM +N + T + + P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL 538
E AC+VD+LGR+G+L+ AL I+ MP++P P VW + L+ +HG + A +
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 539 LELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVG 598
EL + +Y LSN YA+ RW VT +R++M+ +G+KK PG SW+ T +F VG
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVG 733
Query: 599 DKAHPSSSLIYDMLDDLVAIMTD 621
DK HP + IY +L D + + D
Sbjct: 734 DKTHPHAKEIYQVLLDHMQRIKD 756
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 237/513 (46%), Gaps = 62/513 (12%)
Query: 61 LTTRLVSAYATSGDLNMSRLVFHSIEAKN--VYLWNSLINGYVKNREFGHALVLFREMGR 118
LT+ L+S Y + G L+ + + + VY WNSLI Y N L LF G
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLF---GL 117
Query: 119 SHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCG 178
H PD+YT + K GE+ + G+ S N+++AMYSRC
Sbjct: 118 MHSLSWT-PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 179 EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE-GYNADAFT 237
DA KVFDEM +V S+N +I +A LG F RM E G D T
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE-----MFSRMTNEFGCRPDNIT 231
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRV 297
+ ++LP C G G++LHC+ V + +M ++ +G+ L+DMY++ + + V
Sbjct: 232 LVNVLPP-CASLGTHSLGKQLHCFAVTS----EMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ------------------------ 333
F M +++ W AM+ GY Q G EDA+ L +MQ
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 334 ----------MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN------GDT 377
+ G++PN+V+LISVL CA +G L+ GK+IH ++ K ++ GD
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 378 SL-FNALIDMYSKCGSLDYASRVFDNVS-YFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
++ N LIDMY+KC +D A +FD++S RD +TW+ MI Y HG +A+ +M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 436 LQ--LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRS 493
+ +P+ T+ L AC+ + G I+ + Q + + C++DM +
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 494 GQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
G + A M + W SL+T MHG
Sbjct: 527 GSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 201/445 (45%), Gaps = 49/445 (11%)
Query: 40 HRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
H L +Q H +T+ QN F+ LV YA G ++ + VF ++ K+V WN+++ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 100 YVKNREFGHALVLFREM------------------------GRSHGGDC-------VLPD 128
Y + F A+ LF +M G G C + P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 129 DYTLATISKVSGELQDLVYGKLI-------PGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
+ TL ++ + L++GK I P N ++ MY++C +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 182 DAMKVFDEM--PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
A +FD + +R+V ++ VMI G++ G+ + +L C+ +AFTI+
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGD--ANKALELLSEMFEEDCQT-RPNAFTIS 481
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
L V C G+++H Y ++N + + + + LIDMY++ + +R VFD
Sbjct: 482 CAL-VACASLAALRIGKQIHAYALRNQQN---AVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
M ++N WT+++ GY +G E+AL + EM+ + G + + V+L+ VL AC+ G +
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR-RIGFKLDGVTLLVVLYACSHSGMID 596
Query: 360 VGKQ-IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
G + + T ++ + L+D+ + G L+ A R+ + + + W + +S
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPD 443
+HG+ E +K+ +L D
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHD 681
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H L+ G+ L + HL S+ I + S + L RR +Y W ++I Y
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRF--PPSDAGVYHWNSLIRSYG 103
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
NG L L M P+ + V AC + + G+ HA S +
Sbjct: 104 DNGCANKCLYLFGLMH-SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNV 162
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML- 436
+ NAL+ MYS+C SL A +VFD +S + D ++W+S+I +Y G+ + A+ + +M
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVW-DVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+ G +PD IT+V+VL C+ G G ++ +T +M + + C+VDM + G +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS-EMIQNMFVGNCLVDMYAKCGMM 280
Query: 497 DQA 499
D+A
Sbjct: 281 DEA 283
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 199/609 (32%), Positives = 326/609 (53%), Gaps = 47/609 (7%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRL--VSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
R +Q H ++ G +P+ ++L ++A ++ L +R VF I N + WN+LI
Sbjct: 44 RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX 158
Y + ++ F +M C P+ YT + K + E+ L G+ + G +
Sbjct: 104 AYASGPDPVLSIWAFLDMVSE--SQC-YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
ANS++ Y CG+ A KVF + +++V S+N MI+G+ G S
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG-----SPDK 215
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
F++M+ E A T+ +L C K ++GR++ Y+ +N +++ + L
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSAC-AKIRNLEFGRQVCSYIEENRVNVNLT----LA 270
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV--------------------- 317
++++DMY++ + ++R+FD M+ ++ WT M++GY
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 318 ----------QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF 367
QNG P +ALI+ E+Q++ M+ N+++L+S L ACA +G L +G+ IH++
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 368 STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
K + + + +ALI MYSKCG L+ + VF++V RD WS+MI +HG G E
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK-RDVFVWSAMIGGLAMHGCGNE 449
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVV 487
AV + KM + +KP+ +T +V ACS +GLVDE +++ + + Y + P + AC+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 488 DMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPS 547
D+LGRSG L++A++FI+ MP+ P SVWG+LL A +H N ++A LLELEP N
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 548 NYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSL 607
++ LSN YA +W+ V+E+R M+ GLKK PG S I I G H F GD AHP S
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629
Query: 608 IYDMLDDLV 616
+Y L +++
Sbjct: 630 VYGKLHEVM 638
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 43/313 (13%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
A L + H+ I +G N +T+ L+ Y+ GDL SR VF+S+E ++V++W+++I
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI------SKVSGELQDLV------ 146
G + A+ +F +M ++ V P+ T + + + E + L
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEAN----VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
YG ++P + ++ + R G A+K + MP S + G
Sbjct: 496 YG-IVPEEKHYA----------CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
+ A+ + ++ C R ++ E N A LL K GKW+ EL ++ G
Sbjct: 545 KI--HANLNLAEMAC-TRLLELEPRNDGAHV---LLSNIYAKLGKWENVSELRKHMRVTG 598
Query: 267 LDLKMG-SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE-- 323
L + G S + + + + S +S +V+ ++ + NGY PE
Sbjct: 599 LKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE---VMEKLKSNGY----EPEIS 651
Query: 324 DALILLREMQMKD 336
L ++ E +MK+
Sbjct: 652 QVLQIIEEEEMKE 664
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 318/581 (54%), Gaps = 21/581 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H IL +GF + + LV+ Y + ++ +R VF + ++V WNS+INGYV N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD---LVYGKLIPGKSXXXXX 160
L +F +M V + LATI V D + G+ +
Sbjct: 275 GLAEKGLSVFVQM-------LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
N+++ MYS+CG+ A VF EM R+V S+ MI+G+A G G+
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-----LAGEAV 382
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F M+ EG + D +T+ ++L CC + D G+ +H ++ +N L G D+ + ++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLN-CCARYRLLDEGKRVHEWIKENDL----GFDIFVSNA 437
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
L+DMY++ + + VF +M+ +++ W +I GY +N +AL L + + P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
++ ++ VLPACA L G++IH + + D + N+L+DMY+KCG+L A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
D+++ +D ++W+ MI+ YG+HG G+EA+ + +M Q GI+ D I+ VS+L ACS SGLV
Sbjct: 558 DDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
DEG +N + +++PTVE AC+VDML R+G L +A FI+ MP+ P ++WG+LL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
+H + + + ELEPEN Y+ ++N YA ++W+ V +R + +RGL+K
Sbjct: 677 GCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 736
Query: 581 PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
PG SWI I G + F GD ++P + I L + A M +
Sbjct: 737 PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 242/510 (47%), Gaps = 27/510 (5%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
I P L +LQL D ++ + ++ I NGF + L ++L Y GDL + V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
F ++ + WN L+N K+ +F ++ LF++M S V D YT + +SK
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG----VEMDSYTFSCVSKSFSS 207
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
L+ + G+ + G NS++A Y + A KVFDEM +R+V S+N +
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 202 ISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY 261
I+G+ S N + G + F +M G D TI S+ C + GR +H
Sbjct: 268 INGYVS--NGLAEKGLSV---FVQMLVSGIEIDLATIVSVFA-GCADSRLISLGRAVHSI 321
Query: 262 LVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGA 321
VK + ++L+DMYS+ L ++ VF +M R++ +T+MI GY + G
Sbjct: 322 GVKACF----SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 322 PEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN 381
+A+ L EM+ ++G+ P+ ++ +VL CA L GK++H + + +L D + N
Sbjct: 378 AGEAVKLFEEME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-I 440
AL+DMY+KCGS+ A VF + +D I+W+++I Y + EA+ + +L+
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMR-VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
PD TV VL AC+ D+G I+ I R + +VDM + G L
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIH-GYIMRNGYFSDRHVANSLVDMYAKCGAL---- 550
Query: 501 EFIKGMPLDPGPS----VWGSLLTASVMHG 526
+ M D S W ++ MHG
Sbjct: 551 -LLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 324/574 (56%), Gaps = 21/574 (3%)
Query: 51 LTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHAL 110
L + + ++ F+ + +S YA GD+ SR VF S +N+ +WN++I YV+N ++
Sbjct: 243 LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESI 302
Query: 111 VLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSV 170
LF E + G ++ D+ T + LQ + G+ G NS+
Sbjct: 303 ELFLE---AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSL 359
Query: 171 MAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG 230
M MYSRCG + VF M +R+V S+N MIS + G G + + MQ +G
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG---LDDEGLMLVY--EMQKQG 414
Query: 231 YNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK 290
+ D T+ +LL K + G++ H +L++ G+ + + S LIDMYS+S
Sbjct: 415 FKIDYITVTALLSAASNLRNK-EIGKQTHAFLIRQGIQFE-----GMNSYLIDMYSKSGL 468
Query: 291 LVLSRRVFDQ--MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+ +S+++F+ R+ W +MI+GY QNG E ++ R+M ++ +RPN V++ S+
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASI 527
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRD 408
LPAC+ +G + +GKQ+H FS + L+ + + +AL+DMYSK G++ YA +F R+
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE-RN 586
Query: 409 AITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYN 468
++T+++MI YG HG GE A+ + M + GIKPD IT V+VLSACS SGL+DEG+ I+
Sbjct: 587 SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE 646
Query: 469 SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG-PSVWGSLLTASVMHGN 527
+ Y ++P+ E C+ DMLGR G++++A EF+KG+ + +WGSLL + +HG
Sbjct: 647 EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGE 706
Query: 528 -SMTRDLAYRCLLELEPENPSNY-ISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
+ ++ R + +N S Y + LSN YA ++W V +VR M+E+GLKK G S
Sbjct: 707 LELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSG 766
Query: 586 ITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
I I+G + F D+ HP SS IYD++D L M
Sbjct: 767 IEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDM 800
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 216/431 (50%), Gaps = 23/431 (5%)
Query: 74 DLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSH--GGDCVLPDDYT 131
+ ++ R VF ++ KNV WN+LI+ YVK A F M R + +
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFP 222
Query: 132 LATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP 191
+IS+ S + ++ YG ++ +S ++MY+ G+ + +VFD
Sbjct: 223 AVSISR-SIKKANVFYGLML---KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGK 251
+RN+ +N MI + + + F + + +D T L +
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVES----IELFLEAIGSKEIVSDEVTYL-LAASAVSALQQ 333
Query: 252 WDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTA 311
+ GR+ H ++ KN +L + + +SL+ MYSR + S VF M+ R++ W
Sbjct: 334 VELGRQFHGFVSKNFRELP----IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK- 370
MI+ +VQNG ++ L+L+ EMQ K G + + +++ ++L A + L +GKQ HAF +
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQ-KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ 448
Query: 371 -VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF-RDAITWSSMISAYGLHGRGEEA 428
++ G S LIDMYSK G + + ++F+ Y RD TW+SMIS Y +G E+
Sbjct: 449 GIQFEGMNSY---LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Query: 429 VVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
+ ++KML+ I+P+ +TV S+L ACS+ G VD G ++ I +Y + V + + +VD
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVD 564
Query: 489 MLGRSGQLDQA 499
M ++G + A
Sbjct: 565 MYSKAGAIKYA 575
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 231/496 (46%), Gaps = 31/496 (6%)
Query: 57 QNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM 116
Q P + +RL S G+ ++R +F +I LWN++I G++ N AL+ + M
Sbjct: 38 QTPSIRSRL-SKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM 96
Query: 117 GRSHG-GDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMY- 174
++ +C D YT ++ K E ++L GK + NS+M MY
Sbjct: 97 KKTAPFTNC---DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV 153
Query: 175 -----SRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
C E+ KVFD M ++NV ++N +IS + G A + RM+ +
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEAC--RQFGIMMRMEVK 211
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG----SDVHLGSSLIDMY 285
+ ++ P R + V GL LK+G D+ + SS I MY
Sbjct: 212 ---PSPVSFVNVFPAV-------SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY 261
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
+ + SRRVFD RN+ VW MI YVQN +++ L E + ++V+
Sbjct: 262 AELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTY 321
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
+ A + L + +G+Q H F +K + N+L+ MYS+CGS+ + VF ++
Sbjct: 322 LLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE 381
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
RD ++W++MISA+ +G +E ++ +M + G K D ITV ++LSA S L ++ +G
Sbjct: 382 -RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAA--SNLRNKEIG 438
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL-DPGPSVWGSLLTASVM 524
Q + + ++DM +SG + + + +G + + W S+++
Sbjct: 439 KQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 525 HGNSMTRDLAYRCLLE 540
+G++ L +R +LE
Sbjct: 499 NGHTEKTFLVFRKMLE 514
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 196/405 (48%), Gaps = 26/405 (6%)
Query: 41 RLTQQCHAQILTNGFAQNPF-LTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
L +Q H + N F + P + L+ Y+ G ++ S VF S+ ++V WN++I+
Sbjct: 335 ELGRQFHGFVSKN-FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISA 393
Query: 100 YVKNREFGHALVLFREMGRSHGGDCVLPDDY-TLATISKVSGELQDLVYGKLIPGKSXXX 158
+V+N L+L EM + DY T+ + + L++ GK +
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQG-----FKIDYITVTALLSAASNLRNKEIGK--QTHAFLI 446
Query: 159 XXXXXXXXANS-VMAMYSRCGEFGDAMKVFD--EMPQRNVGSFNVMISGWASLGNFASTS 215
NS ++ MYS+ G + K+F+ +R+ ++N MISG+ G+ T
Sbjct: 447 RQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT- 505
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDV 275
+ FR+M + +A T+AS+LP C + G D G++LH + ++ LD +V
Sbjct: 506 ----FLVFRKMLEQNIRPNAVTVASILP-ACSQIGSVDLGKQLHGFSIRQYLD----QNV 556
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
+ S+L+DMYS++ + + +F Q K RN +T MI GY Q+G E A+ L MQ +
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ-E 615
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV-ELNGDTSLFNALIDMYSKCGSLD 394
G++P+ ++ ++VL AC+ G + G +I +V + + + + DM + G ++
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVN 675
Query: 395 YASRVFDNVSYFRD-AITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
A + + A W S++ + LHG E A +++ +
Sbjct: 676 EAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 314/587 (53%), Gaps = 21/587 (3%)
Query: 36 DHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNS 95
D RA R+ H Q + +G L + +V Y + +R VF + K+ LWN+
Sbjct: 134 DDRAGRVI---HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 96 LINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKS 155
+I+GY KN + ++ +FR++ C D TL I ELQ+L G I +
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINE---SCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS 215
+++YS+CG+ +F E + ++ ++N MI G+ S G +
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS- 306
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDV 275
F+ + G + T+ SL+PV +G +H Y +K+ S
Sbjct: 307 ----LSLFKELMLSGARLRSSTLVSLVPV----SGHLMLIYAIHGYCLKSNF----LSHA 354
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
+ ++L +YS+ ++ +R++FD+ ++L W AMI+GY QNG EDA+ L REMQ K
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ-K 413
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
PN V++ +L ACA LG L +GK +H + + ALI MY+KCGS+
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
A R+FD ++ ++ +TW++MIS YGLHG+G+EA+ + +ML GI P +T + VL ACS
Sbjct: 474 ARRLFDLMTK-KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVW 515
+GLV EG I+NS+I RY +P+V+ AC+VD+LGR+G L +AL+FI+ M ++PG SVW
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVW 592
Query: 516 GSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKER 575
+LL A +H ++ L EL+P+N ++ LSN +++ + + VR K+R
Sbjct: 593 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 652
Query: 576 GLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDG 622
L K PG + I I H F GD++HP IY+ L+ L M +
Sbjct: 653 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 257/531 (48%), Gaps = 34/531 (6%)
Query: 1 MVLRKTFTLTTSRYHTSATAFITPHNLLELLQ--LTVDHRAHRLTQQCHAQILTNGFAQN 58
M+LR T++++ T+A A I+ + L+ + ++ H A Q HAQI+ +GF +
Sbjct: 1 MLLR---TVSSATAETTA-ALISKNTYLDFFKRSTSISHLA-----QTHAQIILHGFRND 51
Query: 59 PFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGR 118
L T+L + G + +R +F S++ +V+L+N L+ G+ N +L +F + +
Sbjct: 52 ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRK 111
Query: 119 SHGGDCVLPDDYTLA-TISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRC 177
S + P+ T A IS SG +D G++I G++ ++++ MY +
Sbjct: 112 STD---LKPNSSTYAFAISAASG-FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG-YNADAF 236
DA KVFD MP+++ +N MISG+ + + FR + E D
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQ-----VFRDLINESCTRLDTT 222
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
T+ +LP + + G ++H K G S ++ + I +YS+ K+ +
Sbjct: 223 TLLDILP-AVAELQELRLGMQIHSLATKTGC----YSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 297 VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLG 356
+F + + ++ + AMI+GY NG E +L L +E+ M G R +L+S++P G
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGARLRSSTLVSLVPVS---G 333
Query: 357 GLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMI 416
L++ IH + K S+ AL +YSK ++ A ++FD S + +W++MI
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-SPEKSLPSWNAMI 392
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
S Y +G E+A+ +++M + P+ +T+ +LSAC++ G + G +++ L+
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDF 451
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
+ ++ + ++ M + G + +A M W ++++ +HG
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQ 501
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 198/423 (46%), Gaps = 25/423 (5%)
Query: 26 NLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI 85
LL++L + + RL Q H+ G + ++ T +S Y+ G + M +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 86 EAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDL 145
++ +N++I+GY N E +L LF+E+ S G TL ++ VSG L L
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS-GARL---RSSTLVSLVPVSGHLM-L 337
Query: 146 VYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGW 205
+Y I G + ++ +YS+ E A K+FDE P++++ S+N MISG+
Sbjct: 338 IYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 206 ASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKN 265
G D FR MQ ++ + TI +L C + G G+ +H +
Sbjct: 396 TQNG-----LTEDAISLFREMQKSEFSPNPVTITCILS-ACAQLGALSLGKWVHDLVRST 449
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
+ S +++ ++LI MY++ + +RR+FD M +N W MI+GY +G ++A
Sbjct: 450 DFE----SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNA 382
L + EM + G+ P V+ + VL AC+ G + G +I F++ + G +
Sbjct: 506 LNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGDEI--FNSMIHRYGFEPSVKHYAC 562
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
++D+ + G L A + + +S + W +++ A +H A +K+ +L P
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL--DP 620
Query: 443 DMI 445
D +
Sbjct: 621 DNV 623
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 304/581 (52%), Gaps = 49/581 (8%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
R + H++I+ N L +L+ AYA+ D+ +R VF I +NV + N +I Y
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
V N +G + +F M G V PD YT + K +V G+ I G +
Sbjct: 116 VNNGFYGEGVKVFGTMC----GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
N +++MY +CG +A V DEM +R+V S+N ++ G+A F D
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF-----DDAL 226
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
R M+ + DA T+ASLLP T
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTT------------------------------- 255
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
++ ++ + +F +M ++L W MI Y++N P +A+ L M+ DG P
Sbjct: 256 -------TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEP 307
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ VS+ SVLPAC L +GK+IH + + +L + L NALIDMY+KCG L+ A VF
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
+N+ RD ++W++MISAYG GRG +AV + K+ G+ PD I V+ L+ACS +GL+
Sbjct: 368 ENMKS-RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+EG + + Y++ P +E AC+VD+LGR+G++ +A FI+ M ++P VWG+LL
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
A +H ++ LA L +L PE Y+ LSN YA RW+ VT +R +MK +GLKK
Sbjct: 487 ACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Query: 581 PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
PG S + ++ H+F VGD++HP S IY LD LV M +
Sbjct: 547 PGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 311/578 (53%), Gaps = 16/578 (2%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H+ I+ A+N F+ LV YA G L +R +F + ++ WN++I YV++
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
A LF+ M ++ D LA+ K + L GK + S
Sbjct: 509 NESEAFDLFKRMNLCG----IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
+S++ MYS+CG DA KVF +P+ +V S N +I+G+ S N F+
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAV-----VLFQ 618
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
M G N T A+++ C K G + H + K G +LG SL+ M
Sbjct: 619 EMLTRGVNPSEITFATIVEAC-HKPESLTLGTQFHGQITKRGFS---SEGEYLGISLLGM 674
Query: 285 YSRSKKLVLSRRVFDQMKS-RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
Y S+ + + +F ++ S +++ +WT M++G+ QNG E+AL +EM+ DG+ P++
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR-HDGVLPDQA 733
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ ++VL C++L L G+ IH+ + + D N LIDMY+KCG + +S+VFD +
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ ++W+S+I+ Y +G E+A+ + M Q I PD IT + VL+ACS +G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
I+ +I +Y ++ V+ AC+VD+LGR G L +A +FI+ L P +W SLL A
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
+HG+ + +++ L+ELEP+N S Y+ LSN YAS W+ +R +M++RG+KKVPG
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
SWI + TH FA GDK+H I L+DL +M D
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKD 1011
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 229/481 (47%), Gaps = 18/481 (3%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HA+ + G A N ++ + LVS Y+ + + VF ++E KN WN++I GY N E
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
+ LF +M +S G + DD+T ++ DL G
Sbjct: 410 HKVMELFMDM-KSSGYNI---DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N+++ MY++CG DA ++F+ M R+ ++N +I + N + DL F+RM
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN--ESEAFDL---FKRM 520
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
G +D +AS L C G + G+++HC VK GLD D+H GSSLIDMYS
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQ-GKQVHCLSVKCGLD----RDLHTGSSLIDMYS 575
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ + +R+VF + ++ A+I GY QN E+A++L +EM + G+ P++++
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEM-LTRGVNPSEITFA 633
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN-ALIDMYSKCGSLDYASRVFDNVSY 405
+++ AC L +G Q H TK + + +L+ MY + A +F +S
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
+ + W+ M+S + +G EEA+ Y++M G+ PD T V+VL CS + EG
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
I+ SLI ++DM + G + + + M W SL+ +
Sbjct: 754 IH-SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 526 G 526
G
Sbjct: 813 G 813
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 206/409 (50%), Gaps = 17/409 (4%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
+++ Y G L +RL+F + + +V WN +I+G+ K A+ F M +S
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS---- 322
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
V TL ++ G + +L G ++ ++ +S+++MYS+C + A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
KVF+ + ++N +N MI G+A G + F M+ GYN D FT SLL
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGE-----SHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
C + + G + H ++K K+ ++ +G++L+DMY++ L +R++F++M R
Sbjct: 438 CAA-SHDLEMGSQFHSIIIKK----KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
+ W +I YVQ+ +A L + M + G+ + L S L AC + GL GKQ+
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLC-GIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
H S K L+ D ++LIDMYSKCG + A +VF ++ + ++ +++I+ Y
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW-SVVSMNALIAGYS-QNN 609
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
EEAVV +Q+ML G+ P IT +++ AC K + G + + R
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 208/464 (44%), Gaps = 52/464 (11%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H ++ G +N + LV YA ++ +R VF I N W L +GYVK
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
A+++F M R G PD T
Sbjct: 240 GLPEEAVLVFERM-RDEGHR---PDHLAFVT----------------------------- 266
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
V+ Y R G+ DA +F EM +V ++NVMISG G T + +F
Sbjct: 267 ------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG--CETVAIE---YF 315
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M+ + T+ S+L G D G +H +K GL S++++GSSL+
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAI-GIVANLDLGLVVHAEAIKLGL----ASNIYVGSSLVS 370
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
MYS+ +K+ + +VF+ ++ +N W AMI GY NG + L +M+ G +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK-SSGYNIDDF 429
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ S+L CA L +G Q H+ K +L + + NAL+DMY+KCG+L+ A ++F+ +
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
RD +TW+++I +Y EA +++M GI D + S L AC+ + +G
Sbjct: 490 CD-RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP 507
++ L + + + + ++DM + G + A + +P
Sbjct: 549 KQVH-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 188/399 (47%), Gaps = 20/399 (5%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H + G ++ + L+ Y+ G + +R VF S+ +V N+LI GY +N
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGK-SXXXXXXX 162
A+VLF+EM + G V P + T ATI + + + L G G+ +
Sbjct: 609 -NLEEAVVLFQEM-LTRG---VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQ-RNVGSFNVMISGWASLGNFASTSGGDLWC 221
S++ MY +A +F E+ +++ + M+SG + G +
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK----- 718
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F++ M+ +G D T ++L VC + + GR +H + DL D ++L
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLRE-GRAIHSLIFHLAHDL----DELTSNTL 773
Query: 282 IDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
IDMY++ + S +VFD+M+ R N+ W ++INGY +NG EDAL + M+ M P
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM-P 832
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFST-KVELNGDTSLFNALIDMYSKCGSLDYASRV 399
++++ + VL AC+ G + G++I + + ++D+ + G L A
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ + DA WSS++ A +HG ++ +K+++L
Sbjct: 893 IEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 180/384 (46%), Gaps = 50/384 (13%)
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
L GK + KS N+++ +Y++C + A K FD + +++V ++N M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
++S+G G L F + + + + FT + +L C +T ++GR++HC ++K
Sbjct: 135 YSSIGK----PGKVLRSFVSLFENQIF-PNKFTFSIVLSTCARETNV-EFGRQIHCSMIK 188
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPED 324
GL+ + + G +L+DMY++ ++ +RRVF+ + N WT + +GYV+ G PE+
Sbjct: 189 MGLE----RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALI 384
A+++ M+ +G RP+ ++ ++V I
Sbjct: 245 AVLVFERMR-DEGHRPDHLAFVTV-----------------------------------I 268
Query: 385 DMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDM 444
+ Y + G L A +F +S D + W+ MIS +G G A+ + M + +K
Sbjct: 269 NTYIRLGKLKDARLLFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 445 ITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
T+ SVLSA +D G+ ++ I + + + + + +V M + +++ A + +
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAI-KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 505 GMPLDPGPSVWGSLLTASVMHGNS 528
+ + W +++ +G S
Sbjct: 387 ALE-EKNDVFWNAMIRGYAHNGES 409
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 357 GLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMI 416
L +GK +H+ S + ++ + L NA++D+Y+KC + YA + FD + +D W+SM+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSML 132
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
S Y G+ + + ++ + + I P+ T VLS C++ V+ G I+ S+I + +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGL 191
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYR 536
+ +VDM + ++ A + + +DP W L + V G L +
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 537 CLLELEPENPSN--YISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW-ITISGN 591
+ + E P + ++++ NTY R + + R + E V ++W + ISG+
Sbjct: 251 RMRD-EGHRPDHLAFVTVINTYI---RLGKLKDARLLFGEMSSPDV--VAWNVMISGH 302
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 309/558 (55%), Gaps = 18/558 (3%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLI 97
++ +L H +IL + F ++ ++ L++ Y G + M+R VF ++ ++V WN++I
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 98 NGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXX 157
+GY +N AL++F M + V D T+ ++ V G L+DL G+ +
Sbjct: 191 SGYYRNGYMNDALMMFDWMV----NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
N+++ MY +CG +A VFD M +R+V ++ MI+G+ G+ +
Sbjct: 247 KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE- 305
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
R MQ EG +A TIASL+ VC G K + G+ LH + V+ ++ SD+ +
Sbjct: 306 ----LCRLMQFEGVRPNAVTIASLVSVC-GDALKVNDGKCLHGWAVRQ----QVYSDIII 356
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
+SLI MY++ K++ L RVF + W+A+I G VQN DAL L + M+ +D
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED- 415
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
+ PN +L S+LPA A L L IH + TK L+ +YSKCG+L+ A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 398 RVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
++F+ + +D + W ++IS YG+HG G A+ + +M++ G+ P+ IT S L+AC
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
S SGLV+EG+ ++ ++ Y+ C+VD+LGR+G+LD+A I +P +P +V
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 515 WGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKE 574
WG+LL A V H N ++A L ELEPEN NY+ L+N YA+ RW + +VR+MM+
Sbjct: 596 WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMEN 655
Query: 575 RGLKKVPGISWITISGNT 592
GL+K PG S I I N+
Sbjct: 656 VGLRKKPGHSTIEIRSNS 673
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 251/488 (51%), Gaps = 19/488 (3%)
Query: 43 TQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
T+ H ++T G L+T L YA G + +R +F + ++ +N +I YV+
Sbjct: 34 TKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVR 92
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+ A+ +F M S G CV PD YT ++K +GEL+ + G ++ G+
Sbjct: 93 EGLYHDAISVFIRM-VSEGVKCV-PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
N+++AMY G+ A VFD M R+V S+N MISG+ G D
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYM-----NDALMM 205
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F M E + D TI S+LPV CG + GR +H LV+ + ++G + + ++L+
Sbjct: 206 FDWMVNESVDLDHATIVSMLPV-CGHLKDLEMGRNVH-KLVE---EKRLGDKIEVKNALV 260
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
+MY + ++ +R VFD+M+ R++ WT MINGY ++G E+AL L R MQ +G+RPN
Sbjct: 261 NMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF-EGVRPNA 319
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
V++ S++ C + GK +H ++ + ++ D + +LI MY+KC +D RVF
Sbjct: 320 VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG 379
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
S + WS++I+ + +A+ +++M + ++P++ T+ S+L A + + +
Sbjct: 380 ASKYHTG-PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS---VWGSLL 519
M I+ +T+ +++ +V + + G L+ A + G+ +WG+L+
Sbjct: 439 AMNIH-CYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 520 TASVMHGN 527
+ MHG+
Sbjct: 498 SGYGMHGD 505
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 328/638 (51%), Gaps = 76/638 (11%)
Query: 43 TQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
T Q HA+IL +G + +++ +L+++Y+ N + LV SI +Y ++SLI K
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+ F ++ +F M SHG ++PD + L + KV EL GK I S
Sbjct: 94 AKLFTQSIGVFSRM-FSHG---LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG------------- 209
S+ MY RCG GDA KVFD M ++V + + ++ +A G
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 210 ------NFASTSG-----------GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW 252
N S +G + F+++ G+ D T++S+LP G +
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP-SVGDSEML 268
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK---------- 302
+ GR +H Y++K GL LK D + S++IDMY +S + +F+Q +
Sbjct: 269 NMGRLIHGYVIKQGL-LK---DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY 324
Query: 303 ----SRNLYV---------------------WTAMINGYVQNGAPEDALILLREMQMKDG 337
SRN V WT++I G QNG +AL L REMQ+ G
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-G 383
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
++PN V++ S+LPAC + L G+ H F+ +V L + + +ALIDMY+KCG ++ +
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQ 443
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
VF N+ ++ + W+S+++ + +HG+ +E + ++ +++ +KPD I+ S+LSAC +
Sbjct: 444 IVF-NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
GL DEG + + Y +KP +E +C+V++LGR+G+L +A + IK MP +P VWG+
Sbjct: 503 GLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGA 562
Query: 518 LLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
LL + + N ++A L LEPENP Y+ LSN YA+ W V +R M+ GL
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL 622
Query: 578 KKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
KK PG SWI + ++ GDK+HP I + +D++
Sbjct: 623 KKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEI 660
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 324/613 (52%), Gaps = 55/613 (8%)
Query: 44 QQCHAQ-ILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
+Q HAQ I T + + ++S Y L+ + L+F ++++ V W S+I +
Sbjct: 25 KQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
F AL F EM S G C PD ++ K + DL +G+ + G
Sbjct: 83 QSLFSKALASFVEMRAS--GRC--PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 163 XXXXANSVMAMYSRCGEFGDAM---KVFDEMPQR-------------------------- 193
N++M MY++ G + VFDEMPQR
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 194 -------NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCC 246
+V S+N +I+G+A G + D R M D+FT++S+LP+
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYE-----DALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 247 GKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL 306
G+E+H Y+++ G+D SDV++GSSL+DMY++S ++ S RVF ++ R+
Sbjct: 254 EYVDVIK-GKEIHGYVIRKGID----SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 307 YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA 366
W +++ GYVQNG +AL L R+M + ++P V+ SV+PACA L L +GKQ+H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 367 FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGE 426
+ + + + +AL+DMYSKCG++ A ++FD ++ D ++W+++I + LHG G
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGH 426
Query: 427 EAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
EAV +++M + G+KP+ + V+VL+ACS GLVDE G +NS+ Y + +E A V
Sbjct: 427 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486
Query: 487 VDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENP 546
D+LGR+G+L++A FI M ++P SVW +LL++ +H N + + ++ EN
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 547 SNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSS 606
Y+ + N YAS RW + ++R M+++GL+K P SWI + TH F GD++HPS
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMD 606
Query: 607 LIYDMLDDLVAIM 619
I + L ++ M
Sbjct: 607 KINEFLKAVMEQM 619
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 191/540 (35%), Positives = 298/540 (55%), Gaps = 24/540 (4%)
Query: 93 WNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP 152
WN + F ++ L+R M RS PD ++ I K L V G+ +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS----PDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS--FNVMISGWASLGN 210
++++MY +CG DA KVF+E PQ + S +N +ISG+
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT---- 132
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLK 270
A++ D FRRM+ G + D+ T+ L+P+C W GR LH VK GLD
Sbjct: 133 -ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLW-LGRSLHGQCVKGGLD-- 188
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLR 330
S+V + +S I MY + + RR+FD+M + L W A+I+GY QNG D L L
Sbjct: 189 --SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 331 EMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALIDMY 387
+M+ G+ P+ +L+SVL +CA LG +G H VE NG + + NA I MY
Sbjct: 247 QMK-SSGVCPDPFTLVSVLSSCAHLGAKKIG---HEVGKLVESNGFVPNVFVSNASISMY 302
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITV 447
++CG+L A VFD + + ++W++MI YG+HG GE ++ + M++ GI+PD
Sbjct: 303 ARCGNLAKARAVFD-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 448 VSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP 507
V VLSACS SGL D+G+ ++ ++ Y+++P E +C+VD+LGR+G+LD+A+EFI+ MP
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Query: 508 LDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTE 567
++P +VWG+LL A +H N +LA+ ++E EP N Y+ +SN Y+ K + +
Sbjct: 422 VEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR 481
Query: 568 VRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDGCADMD 627
+R MM+ER +K PG S++ G H F GD++H + ++ MLD+L + + +MD
Sbjct: 482 IRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMD 541
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 194/429 (45%), Gaps = 22/429 (5%)
Query: 13 RYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATS 72
R +S AF P L L++ QQ H + G PF+ T L+S Y
Sbjct: 46 RSGSSPDAFSFPFILKSCASLSLPVSG----QQLHCHVTKGGCETEPFVLTALISMYCKC 101
Query: 73 GDLNMSRLVFHS--IEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDY 130
G + +R VF ++ +N+LI+GY N + A +FR M + V D
Sbjct: 102 GLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG----VSVDSV 157
Query: 131 TLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM 190
T+ + + + L G+ + G+ NS + MY +CG ++FDEM
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM 217
Query: 191 PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG 250
P + + ++N +ISG++ G D+ + +M+ G D FT+ S+L C G
Sbjct: 218 PVKGLITWNAVISGYSQNG-----LAYDVLELYEQMKSSGVCPDPFTLVSVLS-SCAHLG 271
Query: 251 KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
G E+ + NG +V + ++ I MY+R L +R VFD M ++L WT
Sbjct: 272 AKKIGHEVGKLVESNGFV----PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWT 327
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI-HAFST 369
AMI Y +G E L+L +M +K G+RP+ + VL AC+ G G ++ A
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 370 KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
+ +L ++ L+D+ + G LD A +++ D W +++ A +H + A
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAE 446
Query: 430 VTYQKMLQL 438
+ + K+++
Sbjct: 447 LAFAKVIEF 455
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 308/572 (53%), Gaps = 16/572 (2%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
QQ HA GFA N + L++ YA D+ + F E +NV LWN ++ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ ++ +FR+M ++P+ YT +I K L DL G+ I +
Sbjct: 469 DDLRNSFRIFRQMQIEE----IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+ ++ MY++ G+ A + ++V S+ MI+G+ NF + F
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY-NFDDKA----LTTF 579
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
R+M G +D + + + C G + G+++H +G SD+ ++L+
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKE-GQQIHAQACVSGF----SSDLPFQNALVT 634
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+YSR K+ S F+Q ++ + W A+++G+ Q+G E+AL + M ++G+ N
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN-REGIDNNNF 693
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ S + A + + GKQ+HA TK + +T + NALI MY+KCGS+ A + F V
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
S ++ ++W+++I+AY HG G EA+ ++ +M+ ++P+ +T+V VLSACS GLVD+G
Sbjct: 754 ST-KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
+ + S+ + Y + P E CVVDML R+G L +A EFI+ MP+ P VW +LL+A V
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
+H N + A LLELEPE+ + Y+ LSN YA K+WD R MKE+G+KK PG
Sbjct: 873 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQ 932
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
SWI + + HSF VGD+ HP + I++ DL
Sbjct: 933 SWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 239/504 (47%), Gaps = 18/504 (3%)
Query: 23 TPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVF 82
TP+ +L + + +Q H +L GF+ + ++ LVS Y G+L + +F
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 83 HSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGEL 142
++ ++ +N+LING + A+ LF+ M D + PD TLA++
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL----DGLEPDSNTLASLVVACSAD 402
Query: 143 QDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMI 202
L G+ + + +++ +Y++C + A+ F E NV +NVM+
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 203 SGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYL 262
+ L + ++ + FR+MQ E + +T S+L C + G + G ++H +
Sbjct: 463 VAYGLLDDLRNS-----FRIFRQMQIEEIVPNQYTYPSILKTCI-RLGDLELGEQIHSQI 516
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
+K L + ++ S LIDMY++ KL + + + +++ WT MI GY Q
Sbjct: 517 IKTNFQL----NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
+ AL R+M + G+R ++V L + + ACA L L G+QIHA + + D NA
Sbjct: 573 DKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
L+ +YS+CG ++ + F+ D I W++++S + G EEA+ + +M + GI
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF 502
+ T S + A S++ + +G ++ ++IT+ E+C ++ M + G + A +
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVH-AVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 503 IKGMPLDPGPSVWGSLLTASVMHG 526
+ S W +++ A HG
Sbjct: 750 FLEVSTKNEVS-WNAIINAYSKHG 772
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 250/516 (48%), Gaps = 33/516 (6%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
A + +Q HA+IL G + + L+ Y+ +G ++++R VF + K+ W ++I+
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 99 GYVKNREFGHALVLFREM---GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKS 155
G KN A+ LF +M G ++P Y +++ +++ L G+ + G
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLG-------IMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS 215
N+++++Y G A +F M QR+ ++N +I+G + G
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG-----Y 369
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDV 275
G F+RM +G D+ T+ASL+ V C G G++LH Y K G S+
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLV-VACSADGTLFRGQQLHAYTTKLGF----ASNN 424
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
+ +L+++Y++ + + F + + N+ +W M+ Y ++ + R+MQ++
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
+ + PN+ + S+L C LG L +G+QIH+ K + + + LIDMY+K G LD
Sbjct: 485 E-IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 396 ASRVFDNVSYF--RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
A +D + F +D ++W++MI+ Y + ++A+ T+++ML GI+ D + + + +SA
Sbjct: 544 A---WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS 513
C+ + EG I+ + +V + R G+++++ ++ + G +
Sbjct: 601 CAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEES--YLAFEQTEAGDN 657
Query: 514 V-WGSLLTASVMHGNSMTRDLAYRCLLELEPENPSN 548
+ W +L++ GN+ + A R + + E N
Sbjct: 658 IAWNALVSGFQQSGNN---EEALRVFVRMNREGIDN 690
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 222/469 (47%), Gaps = 34/469 (7%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ H+QIL G N L+ +L Y GDL + VF + + ++ WN +I
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATI------SKVSGELQDLVYGKLIPGKSXX 157
G LF M + V P++ T + + V+ ++ + ++ +++
Sbjct: 165 NLIGEVFGLFVRMVSEN----VTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL-----Y 215
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
N ++ +YSR G A +VFD + ++ S+ MISG + N
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK--NECEAEAI 273
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG--SDV 275
L+C M G + +S+L C K + G +LH GL LK+G SD
Sbjct: 274 RLFC---DMYVLGIMPTPYAFSSVLSAC-KKIESLEIGEQLH------GLVLKLGFSSDT 323
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
++ ++L+ +Y L+ + +F M R+ + +ING Q G E A+ L + M +
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL- 382
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
DG+ P+ +L S++ AC+ G L G+Q+HA++TK+ + + AL+++Y+KC ++
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
A F + + W+ M+ AYGL + +++M I P+ T S+L C
Sbjct: 443 ALDYFLETE-VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 456 KSGLVDEGMGIYNSLI-TRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
+ G ++ G I++ +I T +Q+ V C+ ++DM + G+LD A + +
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDIL 548
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
T+ LL C G D GR+LH ++K GLD S+ L L D Y L + +
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLD----SNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 297 VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLG 356
VFD+M R ++ W MI + L M + + + PN+ + VL AC G
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACR--G 198
Query: 357 GLI---VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
G + V +QIHA L T + N LID+YS+ G +D A RVFD + +D +W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-LKDHSSWV 257
Query: 414 SMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
+MIS + EA+ + M LGI P SVLSAC K ++ G ++ L+ +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH-GLVLK 316
Query: 474 YQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
+C +V + G L A M
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 337 GMRPNKVSLISVLPACALLGG-LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
G+RPN +L +L C G L G+++H+ K+ L+ + L L D Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
A +VFD + R TW+ MI E + +M+ + P+ T VL AC
Sbjct: 139 AFKVFDEMPE-RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVW 515
+ + + ++ I ++ + +C ++D+ R+G +D A G+ L S W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-W 256
Query: 516 GSLLT 520
++++
Sbjct: 257 VAMIS 261
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 319/598 (53%), Gaps = 38/598 (6%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVS--AYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
+Q AQ++ NG +PF ++RL++ A + S L+ S + IE N++ WN I G+
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
++ + +L+++M R HG PD +T + KV +L+ G +I G
Sbjct: 130 ESENPKESFLLYKQMLR-HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+ + M++ CG+ +A KVFDE P R++ S+N +I+G+ +G
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKA-----IY 243
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG--------- 272
++ M+ EG D T+ L+ C G + G+E + Y+ +NGL + +
Sbjct: 244 VYKLMESEGVKPDDVTMIGLVS-SCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Query: 273 ---SDVHLG---------------SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
D+H +++I Y+R L +SR++FD M+ +++ +W AMI
Sbjct: 303 SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIG 362
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
G VQ +DAL L +EMQ + +P+++++I L AC+ LG L VG IH + K L+
Sbjct: 363 GSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS 421
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
+ +L +L+DMY+KCG++ A VF + R+++T++++I LHG A+ + +
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 435 MLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
M+ GI PD IT + +LSAC G++ G ++ + +R+ + P ++ + +VD+LGR+G
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAG 540
Query: 495 QLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSN 554
L++A ++ MP++ +VWG+LL MHGN + A + LLEL+P + Y+ L
Sbjct: 541 LLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDG 600
Query: 555 TYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
Y W+ R MM ERG++K+PG S I ++G F V DK+ P S IYD L
Sbjct: 601 MYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 336/652 (51%), Gaps = 50/652 (7%)
Query: 5 KTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTR 64
KTF+L + ++ + + H+ LL VD RA Q HA +++G + L +
Sbjct: 24 KTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPK 83
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
LV+ Y+ N ++ + + + + WN LI Y KN F + ++ M S G
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRM-VSKG--- 139
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
+ PD +T ++ K GE D+ +G+++ G N++++MY R G A
Sbjct: 140 IRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIAR 199
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFT------- 237
++FD M +R+ S+N +I+ +AS G ++ + + F +M G T
Sbjct: 200 RLFDRMFERDAVSWNAVINCYASEGMWS-----EAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 238 --------------------IASLLPV-------CCGKTGKWDYGRELHCYLVKNGLDLK 270
SL PV C G G+E+H + + D
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYD-- 312
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLR 330
G D ++ ++LI MYS+ K L + VF Q + +L W ++I+GY Q E+A LLR
Sbjct: 313 -GID-NVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLR 370
Query: 331 EMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD-TSLFNALIDMYSK 389
EM + G +PN ++L S+LP CA + L GK+ H + + + D T L+N+L+D+Y+K
Sbjct: 371 EM-LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAK 429
Query: 390 CGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS 449
G + A +V D +S RD +T++S+I YG G G A+ +++M + GIKPD +TVV+
Sbjct: 430 SGKIVAAKQVSDLMSK-RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVA 488
Query: 450 VLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD 509
VLSACS S LV EG ++ + Y ++P ++ +C+VD+ GR+G L +A + I MP
Sbjct: 489 VLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
Query: 510 PGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVR 569
P + W +LL A +HGN+ A LLE++PENP Y+ ++N YA+ W + EVR
Sbjct: 549 PSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVR 608
Query: 570 TMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
T+M++ G+KK PG +WI F+VGD + P + Y +LD L +M D
Sbjct: 609 TIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKD 660
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 194/603 (32%), Positives = 324/603 (53%), Gaps = 19/603 (3%)
Query: 12 SRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYAT 71
SR H + PH L+L V + H+ I+ G+ N F+ L++AY+
Sbjct: 135 SRLHREGHE-LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSV 193
Query: 72 SGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYT 131
G ++ +R VF I K++ +W +++ YV+N F +L L M R G +P++YT
Sbjct: 194 CGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM-RMAG---FMPNNYT 249
Query: 132 LATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP 191
T K S L + K + G+ ++ +Y++ G+ DA KVF+EMP
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCC-GKTG 250
+ +V ++ MI+ + N DL F RM+ + FT++S+L C GK
Sbjct: 310 KNDVVPWSFMIARFCQ--NGFCNEAVDL---FIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 251 KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
G +LH +VK G DL D+++ ++LID+Y++ +K+ + ++F ++ S+N W
Sbjct: 365 --GLGEQLHGLVVKVGFDL----DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
+I GY G A + RE +++ + +V+ S L ACA L + +G Q+H + K
Sbjct: 419 TVIVGYENLGEGGKAFSMFRE-ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
++ N+LIDMY+KCG + +A VF+ + D +W+++IS Y HG G +A+
Sbjct: 478 TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI-DVASWNALISGYSTHGLGRQALR 536
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
M KP+ +T + VLS CS +GL+D+G + S+I + ++P +E C+V +L
Sbjct: 537 ILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLL 596
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYI 550
GRSGQLD+A++ I+G+P +P +W ++L+AS+ N + +L++ P++ + Y+
Sbjct: 597 GRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYV 656
Query: 551 SLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYD 610
+SN YA K+W V +R MKE G+KK PG+SWI G+ H F+VG HP LI
Sbjct: 657 LVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLING 716
Query: 611 MLD 613
ML+
Sbjct: 717 MLE 719
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 163/339 (48%), Gaps = 23/339 (6%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N ++ Y + G DA+ +FDEMP+RN SF + G+A D + R+
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC---------QDPIGLYSRLH 138
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
EG+ + S L + K + LH +VK G D S+ +G++LI+ YS
Sbjct: 139 REGHELNPHVFTSFLKLFV-SLDKAEICPWLHSPIVKLGYD----SNAFVGAALINAYSV 193
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ +R VF+ + +++ VW +++ YV+NG ED+L LL M+M G PN + +
Sbjct: 194 CGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA-GFMPNNYTFDT 252
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
L A LG K +H K D + L+ +Y++ G + A +VF+ +
Sbjct: 253 ALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK-N 311
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK---SGLVDEGM 464
D + WS MI+ + +G EAV + +M + + P+ T+ S+L+ C+ SGL ++
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
G L+ + + + ++D+ + ++D A++
Sbjct: 372 G----LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 313/637 (49%), Gaps = 75/637 (11%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HA ++ +GF+ F+ RL+ AY+ G L R VF + +N+Y WNS++ G K
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 107 GHALVLFREM------------------GRSHGGDCVLP---------DDYTLATISKVS 139
A LFR M R C ++Y+ A++
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
L D+ G + ++++ MYS+CG DA +VFDEM RNV S+N
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
+I+ + G + D+ F+ M D T+AS++ C + G+E+H
Sbjct: 223 SLITCFEQNG--PAVEALDV---FQMMLESRVEPDEVTLASVISACASLSA-IKVGQEVH 276
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD-------------------- 299
+VKN K+ +D+ L ++ +DMY++ ++ +R +FD
Sbjct: 277 GRVVKND---KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 300 -----------QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+M RN+ W A+I GY QNG E+AL L ++ ++ + P S ++
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK-RESVCPTHYSFANI 392
Query: 349 LPACALLGGLIVGKQIH------AFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
L ACA L L +G Q H F + D + N+LIDMY KCG ++ VF
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ RD ++W++MI + +G G EA+ +++ML+ G KPD IT++ VLSAC +G V+E
Sbjct: 453 MME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G ++S+ + + P + C+VD+LGR+G L++A I+ MP+ P +WGSLL A
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPG 582
+H N LLE+EP N Y+ LSN YA +W+ V VR M++ G+ K PG
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPG 631
Query: 583 ISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
SWI I G+ H F V DK+HP I+ +LD L+A M
Sbjct: 632 CSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 202/430 (46%), Gaps = 48/430 (11%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H+ I + F + ++ + LV Y+ G++N ++ VF + +NV WNSLI + +N
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX-XXXXX 163
AL +F+ M S V PD+ TLA++ L + G+ + G+
Sbjct: 233 PAVEALDVFQMMLESR----VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND 288
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+N+ + MY++C +A +FD MP RNV + MISG+A AST L F
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA---ASTKAARL--MF 343
Query: 224 RRMQ---------------CEGYNADAFTIASLLP---VC------------CGKTGKWD 253
+M G N +A ++ LL VC C +
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
Query: 254 YGRELHCYLVKNGLDLKMGS--DVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTA 311
G + H +++K+G + G D+ +G+SLIDMY + + VF +M R+ W A
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNA 463
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV 371
MI G+ QNG +AL L REM ++ G +P+ +++I VL AC G + G+ H FS+
Sbjct: 464 MIIGFAQNGYGNEALELFREM-LESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSSMT 520
Query: 372 ELNGDTSL---FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEA 428
G L + ++D+ + G L+ A + + + D++ W S+++A +H
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 580
Query: 429 VVTYQKMLQL 438
+K+L++
Sbjct: 581 KYVAEKLLEV 590
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 37/306 (12%)
Query: 234 DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL 293
D+ A LL C Y R +H ++K+G +++ + + LID YS+ L
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGF----SNEIFIQNRLIDAYSKCGSLED 73
Query: 294 SRRVFDQMKSRNLY-------------------------------VWTAMINGYVQNGAP 322
R+VFD+M RN+Y W +M++G+ Q+
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
E+AL M K+G N+ S SVL AC+ L + G Q+H+ K D + +A
Sbjct: 134 EEALCYFAMMH-KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
L+DMYSKCG+++ A RVFD + R+ ++W+S+I+ + +G EA+ +Q ML+ ++P
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF 502
D +T+ SV+SAC+ + G ++ ++ +++ + + VDM + ++ +A
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 503 IKGMPL 508
MP+
Sbjct: 312 FDSMPI 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 359 IVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV--------------- 403
I + +HA K + + + N LID YSKCGSL+ +VFD +
Sbjct: 37 IYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 404 ----------SYF-----RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVV 448
S F RD TW+SM+S + H R EEA+ + M + G + +
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 449 SVLSACSKSGLVDEGMGI-YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP 507
SVLSAC SGL D G+ +SLI + V I + +VDM + G ++ A M
Sbjct: 157 SVLSAC--SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 508 LDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLE--LEPEN 545
D W SL+T +G ++ ++ +LE +EP+
Sbjct: 215 -DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 314/576 (54%), Gaps = 19/576 (3%)
Query: 45 QCHAQILTNGFAQNPFLTTR--LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
Q HA + GF NPFLT L+ +Y L+++ ++F I K+ +N+LI GY K
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+ + ++ LF +M R G P D+T + + K L D G+ + S
Sbjct: 228 DGLYTESIHLFLKM-RQSGHQ---PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
N ++ YS+ + +FDEMP+ + S+NV+IS ++ + ++ F
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS-----LHF 338
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
FR MQC G++ F A++L + GR+LHC + D S +H+G+SL+
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIA-ANLSSLQMGRQLHCQALLATAD----SILHVGNSLV 393
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
DMY++ + + +F + R WTA+I+GYVQ G L L +M+ + +R ++
Sbjct: 394 DMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQ 452
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+ +VL A A L++GKQ+HAF + + + L+DMY+KCGS+ A +VF+
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ R+A++W+++ISA+ +G GE A+ + KM++ G++PD ++++ VL+ACS G V++
Sbjct: 513 MPD-RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G + ++ Y + P + AC++D+LGR+G+ +A + + MP +P +W S+L A
Sbjct: 572 GTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Query: 523 VMHGNSMTRDLAYRCLLELEP-ENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+H N + A L +E + + Y+S+SN YA+ W+ V +V+ M+ERG+KKVP
Sbjct: 632 RIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVP 691
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVA 617
SW+ ++ H F+ D+ HP+ I +++L A
Sbjct: 692 AYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 205/420 (48%), Gaps = 20/420 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L QQ HA +T GF+++ + +++ Y+ + +R++F + + +N +I+ Y
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPD--DYTLATISKVSGELQDLVYGKLIPGKSXXXX 159
+ ++ +L FREM C+ D ++ AT+ ++ L L G+ + ++
Sbjct: 328 QADQYEASLHFFREM------QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 160 XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL 219
NS++ MY++C F +A +F +PQR S+ +ISG+ G G L
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG----LHGAGL 437
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
F +M+ AD T A++L G++LH +++++G +L+ +V GS
Sbjct: 438 K-LFTKMRGSNLRADQSTFATVLKA-SASFASLLLGKQLHAFIIRSG-NLE---NVFSGS 491
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
L+DMY++ + + +VF++M RN W A+I+ + NG E A+ +M ++ G++
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQ 550
Query: 340 PNKVSLISVLPACALLGGLIVGKQ-IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
P+ VS++ VL AC+ G + G + A S + + ++D+ + G A +
Sbjct: 551 PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 610
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
+ D + + D I WSS+++A +H A +K+ + D VS+ + + +G
Sbjct: 611 LMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 169/362 (46%), Gaps = 16/362 (4%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N++++ + + G+ A +FD MP R V ++ +++ +A +F + + FR+M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHF-----DEAFKLFRQM- 136
Query: 228 CEGYNA---DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
C + D T +LLP C + G ++H + VK G D + + + L+
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFD--TNPFLTVSNVLLKS 193
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
Y ++L L+ +F+++ ++ + +I GY ++G +++ L +M+ + G +P+ +
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR-QSGHQPSDFT 252
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
VL A L +G+Q+HA S + D S+ N ++D YSK + +FD +
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
D ++++ +IS+Y + E ++ +++M +G ++LS + + G
Sbjct: 313 EL-DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
++ + + + +VDM + ++A K +P S W +L++ V
Sbjct: 372 QLHCQALL-ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISGYVQ 429
Query: 525 HG 526
G
Sbjct: 430 KG 431
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 316/592 (53%), Gaps = 16/592 (2%)
Query: 25 HNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHS 84
NL+ +L++ Q H +L +G N + L+ Y + M+ VF S
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 85 IEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD 144
+ +NV W++L++G+V N + +L LF EMGR + P+++T +T K G L
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG----IYPNEFTFSTNLKACGLLNA 122
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
L G I G NS++ MYS+CG +A KVF + R++ S+N MI+G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNA--DAFTIASLLPVCCGKTGKWDYGRELHCYL 262
+ G G F MQ D FT+ SLL C TG G+++H +L
Sbjct: 183 FVHAG-----YGSKALDTFGMMQEANIKERPDEFTLTSLLKAC-SSTGMIYAGKQIHGFL 236
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
V++G S + SL+D+Y + L +R+ FDQ+K + + W+++I GY Q G
Sbjct: 237 VRSGFHCP--SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
+A+ L + +Q + + + +L S++ A L GKQ+ A + K+ +TS+ N+
Sbjct: 295 VEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
++DMY KCG +D A + F + +D I+W+ +I+ YG HG G+++V + +ML+ I+P
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQ-LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF 502
D + ++VLSACS SG++ EG +++ L+ + +KP VE ACVVD+LGR+G+L +A
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 503 IKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRW 562
I MP+ P +W +LL+ +HG+ + LL ++ +NP+NY+ +SN Y W
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYW 532
Query: 563 DVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDD 614
+ R + +GLKK G+SW+ I H F G+ +HP + +I + L +
Sbjct: 533 NEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/573 (34%), Positives = 305/573 (53%), Gaps = 14/573 (2%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HA IL G + L L+ +Y G + + +F+ + KN+ W +L++GY +N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
A+ LF M + + PD Y ++I L L +G + +
Sbjct: 329 ALHKEAMELFTSMSKFG----LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
NS++ MY++C DA KVFD +V FN MI G++ LG + F
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT--QWELHEALNIF 442
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
R M+ T SLL T +++H + K GL+L D+ GS+LID
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTS-LGLSKQIHGLMFKYGLNL----DIFAGSALID 497
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+YS L SR VFD+MK ++L +W +M GYVQ E+AL L E+Q+ RP++
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEF 556
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ +++ A L + +G++ H K L + + NAL+DMY+KCGS + A + FD+
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ RD + W+S+IS+Y HG G++A+ +KM+ GI+P+ IT V VLSACS +GLV++G
Sbjct: 617 AS-RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
+ + L+ R+ ++P E C+V +LGR+G+L++A E I+ MP P VW SLL+
Sbjct: 676 LKQFE-LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
GN + A + +P++ ++ LSN YAS W +VR MK G+ K PG
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGR 794
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
SWI I+ H F DK+H ++ IY++LDDL+
Sbjct: 795 SWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 240/500 (48%), Gaps = 29/500 (5%)
Query: 35 VDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWN 94
+D R + Q + ++ +GF ++ ++ T L+ Y G+++ +RLVF ++ K+ W
Sbjct: 159 LDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT 218
Query: 95 SLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGK 154
++I+G VK +L LF ++ D V+PD Y L+T+ L L GK I
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLME----DNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 155 SXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFAST 214
N ++ Y +CG A K+F+ MP +N+ S+ ++SG+ N
Sbjct: 275 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ--NALHK 332
Query: 215 SGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSD 274
+L F M G D + +S+L C +G ++H Y +K L G+D
Sbjct: 333 EAMEL---FTSMSKFGLKPDMYACSSIL-TSCASLHALGFGTQVHAYTIKANL----GND 384
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP---EDALILLRE 331
++ +SLIDMY++ L +R+VFD + ++ ++ AMI GY + G +AL + R+
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCG 391
M+ + +RP+ ++ +S+L A A L L + KQIH K LN D +ALID+YS C
Sbjct: 445 MRFR-LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 392 SLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
L + VFD + +D + W+SM + Y EEA+ + ++ +PD T +++
Sbjct: 504 CLKDSRLVFDEMK-VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 452 SACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG 511
+A V G + L+ R ++ I ++DM + G + A + D
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHK-----AFDSA 616
Query: 512 PS----VWGSLLTASVMHGN 527
S W S++++ HG
Sbjct: 617 ASRDVVCWNSVISSYANHGE 636
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/568 (24%), Positives = 269/568 (47%), Gaps = 37/568 (6%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
LLQL H QI+ G + +L+ L++ Y+ +G + +R VF + +N
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 90 VYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI----SKVSGELQDL 145
+ W+++++ + + +LV+F E R+ P++Y L++ S + G + +
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS---PNEYILSSFIQACSGLDGRGRWM 166
Query: 146 VYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGW 205
V+ + ++ Y + G A VFD +P+++ ++ MISG
Sbjct: 167 VFQ--LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 206 ASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKN 265
+G S L F++ M+ + D + ++++L C + G+++H ++++
Sbjct: 225 VKMGR----SYVSLQLFYQLME-DNVVPDGYILSTVLSA-CSILPFLEGGKQIHAHILRY 278
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
GL++ D L + LID Y + +++ + ++F+ M ++N+ WT +++GY QN ++A
Sbjct: 279 GLEM----DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEA 334
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
+ L M K G++P+ + S+L +CA L L G Q+HA++ K L D+ + N+LID
Sbjct: 335 MELFTSMS-KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY---GLHGRGEEAVVTYQKMLQLGIKP 442
MY+KC L A +VFD + D + +++MI Y G EA+ ++ M I+P
Sbjct: 394 MYAKCDCLTDARKVFD-IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRP 452
Query: 443 DMITVVSVLSACSKSGLVDEGMGI-YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
++T VS+L A + L G+ + L+ +Y + + + ++D+ L +
Sbjct: 453 SLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENP-----SNYISLSNTY 556
M + +W S+ V + L L+L E P +N ++ +
Sbjct: 511 VFDEMKV-KDLVIWNSMFAGYVQQSEN-EEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 557 ASYKRWDVVTEVRTMMKERGLKKVPGIS 584
AS + + E + +RGL+ P I+
Sbjct: 569 ASVQ---LGQEFHCQLLKRGLECNPYIT 593
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 29/292 (9%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L++Q H + G + F + L+ Y+ L SRLVF ++ K++ +WNS+ GYV
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+ E AL LF E+ S PD++T A + +G L + G+ +
Sbjct: 532 QQSENEEALNLFLELQLSRER----PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+++ MY++CG DA K FD R+V +N +IS +A+ G G
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE-----GKKALQ 642
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD-----LKMG--SD 274
+M EG + T +L C H LV++GL L+ G +
Sbjct: 643 MLEKMMSEGIEPNYITFVGVLSACS------------HAGLVEDGLKQFELMLRFGIEPE 690
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGYVQNGAPEDA 325
++ + R+ +L +R + ++M ++ VW ++++G + G E A
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
+L Q+ H Q+L G NP++T L+ YA G + F S +++V WNS+I+ Y
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631
Query: 101 VKNREFGHALVLFREM 116
+ E AL + +M
Sbjct: 632 ANHGEGKKALQMLEKM 647
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 310/593 (52%), Gaps = 38/593 (6%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
RL Q HA L + FA + + T + YA ++ ++++F + E N +N++I GY
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+ AL+LF + S G D+ +L+ + + ++ L G I G +
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLG----FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
AN+ + MY +C +A +VFDEM +R+ S+N +I+ G G +
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK-----GYETL 468
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F M D FT S+L C G G YG E+H +VK+G M S+ +G S
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTG--GSLGYGMEIHSSIVKSG----MASNSSVGCS 522
Query: 281 LIDMYSRSKKLVLSRRV----------------FDQMKSRNL----YVWTAMINGYVQNG 320
LIDMYS+ + + ++ ++M ++ L W ++I+GYV
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
EDA +L M M+ G+ P+K + +VL CA L +GKQIHA K EL D +
Sbjct: 583 QSEDAQMLFTRM-MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
+ L+DMYSKCG L + SR+ S RD +TW++MI Y HG+GEEA+ +++M+ I
Sbjct: 642 STLVDMYSKCGDL-HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
KP+ +T +S+L AC+ GL+D+G+ + + Y + P + + +VD+LG+SG++ +AL
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 501 EFIKGMPLDPGPSVWGSLLTASVMHGNSM-TRDLAYRCLLELEPENPSNYISLSNTYASY 559
E I+ MP + +W +LL +H N++ + A LL L+P++ S Y LSN YA
Sbjct: 761 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 820
Query: 560 KRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
W+ V+++R M+ LKK PG SW+ + H F VGDKAHP IY+ L
Sbjct: 821 GMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 257/553 (46%), Gaps = 68/553 (12%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
A L +Q HA ++ +GF F+ L+ Y S D + +VF + ++V WN +IN
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 99 -------------------------------GYVKNREFGHALVLFREMGRSHGGDCVLP 127
GY++N E ++ +F +MGR + +
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR----EGIEF 178
Query: 128 DDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVF 187
D T A I KV L+D G I G A++++ MY++ F ++++VF
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 188 DEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCG 247
+P++N S++ +I+G N S + FF+ MQ AS+L C
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQ-NNLLSLA----LKFFKEMQKVNAGVSQSIYASVLR-SCA 292
Query: 248 KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLY 307
+ G +LH + +K+ +D + ++ +DMY++ + ++ +FD ++ N
Sbjct: 293 ALSELRLGGQLHAHALKSDF----AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 308 VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF 367
+ AMI GY Q AL+L + M G+ +++SL V ACAL+ GL G QI+
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 368 STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
+ K L+ D + NA IDMY KC +L A RVFD + RDA++W+++I+A+ +G+G E
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYE 466
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVV 487
+ + ML+ I+PD T S+L AC+ G + GM I++S I + M + ++
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSS-IVKSGMASNSSVGCSLI 524
Query: 488 DMLGRSGQLDQA-------------------LEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
DM + G +++A LE + L W S+++ VM S
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 529 MTRDLAYRCLLEL 541
+ + ++E+
Sbjct: 585 EDAQMLFTRMMEM 597
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 248/555 (44%), Gaps = 44/555 (7%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L Q H ++ G + + L+ YA S VF I KN W+++I G V
Sbjct: 198 LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+N AL F+EM + + G A++ + L +L G + +
Sbjct: 258 QNNLLSLALKFFKEMQKVNAG----VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFA 313
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
+ + MY++C DA +FD N S+N MI+G++ G
Sbjct: 314 ADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ-----EEHGFKALL 368
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F R+ G D +++ + C G + G +++ +K+ L L DV + ++
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSE-GLQIYGLAIKSSLSL----DVCVANAA 423
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
IDMY + + L + RVFD+M+ R+ W A+I + QNG + L L M ++ + P+
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM-LRSRIEPD 482
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+ + S+L AC G L G +IH+ K + ++S+ +LIDMYSKCG ++ A ++
Sbjct: 483 EFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI-- 539
Query: 402 NVSYFRDA---------------------ITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
+ +F+ A ++W+S+IS Y + + E+A + + +M+++GI
Sbjct: 540 HSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 599
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL-DQA 499
PD T +VL C+ G I+ +I + +++ V IC+ +VDM + G L D
Sbjct: 600 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 500 LEFIKGMPLDPGPSVWGSLLTASVMHGNSMTR-DLAYRCLLELEPENPSNYISLSNTYAS 558
L F K + D W +++ HG L R +LE N +IS+ A
Sbjct: 659 LMFEKSLRRD--FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 559 YKRWDVVTEVRTMMK 573
D E MMK
Sbjct: 717 MGLIDKGLEYFYMMK 731
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 308/584 (52%), Gaps = 37/584 (6%)
Query: 58 NPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMG 117
N F L+ AY+ +G ++ F + ++ WN LI GY + G A+ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 118 RSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRC 177
R + TL T+ K+S + GK I G+ + ++ MY+
Sbjct: 131 RDFSANLT---RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISG-----------------------WASLGNFAST 214
G DA KVF + RN +N ++ G WA++ +
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 215 SG---GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKM 271
+G + CF R M+ +G D + S+LP C G G + G+++H +++
Sbjct: 248 NGLAKEAIECF-REMKVQGLKMDQYPFGSVLPAC-GGLGAINEGKQIHACIIRTNFQ--- 302
Query: 272 GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLRE 331
+++GS+LIDMY + K L ++ VFD+MK +N+ WTAM+ GY Q G E+A+ + +
Sbjct: 303 -DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCG 391
MQ + G+ P+ +L + ACA + L G Q H + L ++ N+L+ +Y KCG
Sbjct: 362 MQ-RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 392 SLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
+D ++R+F+ ++ RDA++W++M+SAY GR E + + KM+Q G+KPD +T+ V+
Sbjct: 421 DIDDSTRLFNEMN-VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 452 SACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG 511
SACS++GLV++G + + + Y + P++ +C++D+ RSG+L++A+ FI GMP P
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 512 PSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTM 571
W +LL+A GN A L+EL+P +P+ Y LS+ YAS +WD V ++R
Sbjct: 540 AIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRG 599
Query: 572 MKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
M+E+ +KK PG SWI G HSF+ D++ P IY L++L
Sbjct: 600 MREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 16/310 (5%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HA I+ F + ++ + L+ Y L+ ++ VF ++ KNV W +++ GY +
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
A+ +F +M RS + PD YTL + L G GK+
Sbjct: 350 GRAEEAVKIFLDMQRSG----IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+NS++ +Y +CG+ D+ ++F+EM R+ S+ M+S +A G T F
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ-----LF 460
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYG-RELHCYLVKNGLDLKMGSDVHLGSSLI 282
+M G D T+ ++ C + G + G R + G+ +G H S +I
Sbjct: 461 DKMVQHGLKPDGVTLTGVISA-CSRAGLVEKGQRYFKLMTSEYGIVPSIG---HY-SCMI 515
Query: 283 DMYSRSKKLVLSRRVFDQMK-SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
D++SRS +L + R + M + WT +++ G E + D P
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 342 KVSLISVLPA 351
+L+S + A
Sbjct: 576 GYTLLSSIYA 585
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 315/629 (50%), Gaps = 49/629 (7%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
L+Q HR Q HA+I+ + FL ++L+S Y + VF I +N
Sbjct: 28 LIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRN 87
Query: 90 VYLWNSLINGYVKNREFGHALVLFRE-MGRS-HGGDCVLPDDYTLATISKVSGELQDLVY 147
+ +N+L+ Y + A LF +G S + D PD +++ + K D
Sbjct: 88 AFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWL 147
Query: 148 GKL---IPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
G L + G N ++ Y++C A KVFDEM +R+V S+N MISG
Sbjct: 148 GSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISG 207
Query: 205 WASLGNFASTSGGDLWCFFRRM-QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
++ G+F D ++ M C + + T+ S+ C G++ +G E+H ++
Sbjct: 208 YSQSGSFE-----DCKKMYKAMLACSDFKPNGVTVISVFQAC-GQSSDLIFGLEVHKKMI 261
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRN------------------ 305
+N + + D+ L +++I Y++ L +R +FD+M ++
Sbjct: 262 ENHIQM----DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 306 -------------LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
L W AMI+G +QN E+ + REM ++ G RPN V+L S+LP+
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM-IRCGSRPNTVTLSSLLPSL 376
Query: 353 ALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITW 412
L GK+IHAF+ + + + + ++ID Y+K G L A RVFDN R I W
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD-RSLIAW 435
Query: 413 SSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLIT 472
+++I+AY +HG + A + +M LG KPD +T+ +VLSA + SG D I++S++T
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT 495
Query: 473 RYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRD 532
+Y ++P VE AC+V +L R+G+L A+EFI MP+DP VWG+LL + + G+
Sbjct: 496 KYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIAR 555
Query: 533 LAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNT 592
A L E+EPEN NY ++N Y RW+ VR MK GLKK+PG SWI
Sbjct: 556 FACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGL 615
Query: 593 HSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
SF D + S +Y++++ LV M+D
Sbjct: 616 RSFIAKDSSCERSKEMYEIIEGLVESMSD 644
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 311/576 (53%), Gaps = 17/576 (2%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L Q H ++ +G + L+S Y+ G + + +F + + WN +I+GYV
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
++ +L F EM S VLPD T +++ + ++L Y K I
Sbjct: 317 QSGLMEESLTFFYEMISSG----VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
++++ Y +C A +F + +V F MISG+ G + D
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI-----DSLE 427
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
FR + + + T+ S+LPV G GRELH +++K G D + ++G ++
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVI-GILLALKLGRELHGFIIKKGFD----NRCNIGCAV 482
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
IDMY++ ++ L+ +F+++ R++ W +MI Q+ P A+ + R+M + G+ +
Sbjct: 483 IDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV-SGICYD 541
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
VS+ + L ACA L GK IH F K L D + LIDMY+KCG+L A VF
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL-GIKPDMITVVSVLSACSKSGLV 460
+ ++ ++W+S+I+A G HG+ ++++ + +M++ GI+PD IT + ++S+C G V
Sbjct: 602 TMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
DEG+ + S+ Y ++P E ACVVD+ GR+G+L +A E +K MP P VWG+LL
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
A +H N ++A L++L+P N Y+ +SN +A+ + W+ VT+VR++MKER ++K+
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 581 PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
PG SWI I+ TH F GD HP SS IY +L+ L+
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLL 816
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 240/474 (50%), Gaps = 18/474 (3%)
Query: 54 GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLF 113
G N F+ + L+ AY G +++ +F + K+ +WN ++NGY K + F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 114 REMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAM 173
M D + P+ T + V + G + G NS+++M
Sbjct: 228 SVMRM----DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 174 YSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNA 233
YS+CG F DA K+F M + + ++N MISG+ G + FF M G
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES-----LTFFYEMISSGVLP 338
Query: 234 DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL 293
DA T +SLLP K +Y +++HCY++++ + L D+ L S+LID Y + + + +
Sbjct: 339 DAITFSSLLP-SVSKFENLEYCKQIHCYIMRHSISL----DIFLTSALIDAYFKCRGVSM 393
Query: 294 SRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
++ +F Q S ++ V+TAMI+GY+ NG D+L + R + +K + PN+++L+S+LP
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-VKVKISPNEITLVSILPVIG 452
Query: 354 LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
+L L +G+++H F K + ++ A+IDMY+KCG ++ A +F+ +S RD ++W+
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK-RDIVSWN 511
Query: 414 SMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
SMI+ A+ +++M GI D +++ + LSAC+ G I+ +I +
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-K 570
Query: 474 YQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
+ + V + ++DM + G L A+ K M + W S++ A HG
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGK 623
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 246/526 (46%), Gaps = 23/526 (4%)
Query: 4 RKTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTT 63
+K+ L S T P L LLQ + R +Q HA ++ N + + +
Sbjct: 18 KKSLPLRNSSRFLEET---IPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74
Query: 64 RLVSAYATSGDLNMSRLVFHSIEAK--NVYLWNSLINGYVKNREFGHALVLFREMGRSHG 121
R++ YA G + +F+ ++ + ++ WNS+I+ +V+N AL + +M G
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKM-LCFG 133
Query: 122 GDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
V PD T + K L++ + A+S++ Y G+
Sbjct: 134 ---VSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKID 190
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASL 241
K+FD + Q++ +NVM++G+A G S G F M+ + + +A T +
Sbjct: 191 VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG-----FSVMRMDQISPNAVTFDCV 245
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
L VC K D G +LH +V +G+D + GS + +SL+ MYS+ + + ++F M
Sbjct: 246 LSVCASKL-LIDLGVQLHGLVVVSGVDFE-GS---IKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
+ W MI+GYVQ+G E++L EM + G+ P+ ++ S+LP+ + L
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEM-ISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
KQIH + + ++ D L +ALID Y KC + A +F + D + +++MIS Y
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV-DVVVFTAMISGYLH 418
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
+G +++ ++ ++++ I P+ IT+VS+L + G ++ +I +
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCN 477
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
I V+DM + G+++ A E + + S W S++T N
Sbjct: 478 IGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRCAQSDN 522
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 22 ITPHN--LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
I+P+ L+ +L + A +L ++ H I+ GF + ++ YA G +N++
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
+F + +++ WNS+I ++ A+ +FR+MG S G C D +++
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS--GICY--DCVSISAALSAC 552
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
L +GK I G ++++ MY++CG AM VF M ++N+ S+N
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRM-QCEGYNADAFTIASLLPVCCGKTGKWDYG 255
+I+ + G D C F M + G D T ++ CC G D G
Sbjct: 613 SIIAACGNHGKLK-----DSLCLFHEMVEKSGIRPDQITFLEIISSCC-HVGDVDEG 663
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 195/610 (31%), Positives = 328/610 (53%), Gaps = 54/610 (8%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGD---LNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
HAQ++ G + ++L+ S L + VF +I+ N+ +WN++ G+ +
Sbjct: 53 HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALS 112
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ AL L+ M S G +LP+ YT + K + + G+ I G
Sbjct: 113 SDPVSALKLYVCM-ISLG---LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSF------------------------- 198
S+++MY + G DA KVFD+ P R+V S+
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 199 ------NVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW 252
N MISG+A GN+ F+ M D T+ +++ C ++G
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALE-----LFKDMMKTNVRPDESTMVTVVSAC-AQSGSI 282
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM 312
+ GR++H ++ +G GS++ + ++LID+YS+ +L + +F+++ +++ W +
Sbjct: 283 ELGRQVHLWIDDHGF----GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
I GY ++AL+L +EM ++ G PN V+++S+LPACA LG + +G+ IH + K
Sbjct: 339 IGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-R 396
Query: 373 LNGDT---SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
L G T SL +LIDMY+KCG ++ A +VF+++ + + +W++MI + +HGR + +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH-KSLSSWNAMIFGFAMHGRADASF 455
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
+ +M ++GI+PD IT V +LSACS SG++D G I+ ++ Y+M P +E C++D+
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
LG SG +A E I M ++P +W SLL A MHGN + L+++EPENP +Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIY 609
+ LSN YAS RW+ V + R ++ ++G+KKVPG S I I H F +GDK HP + IY
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635
Query: 610 DMLDDLVAIM 619
ML+++ ++
Sbjct: 636 GMLEEMEVLL 645
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
L +Q H I +GF N + L+ Y+ G+L + +F + K+V WN+LI GY
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPG--KSXXX 158
+ AL+LF+EM RS G+ P+D T+ +I L + G+ I
Sbjct: 343 THMNLYKEALLLFQEMLRS--GET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
S++ MY++CG+ A +VF+ + +++ S+N MI G+A G + + D
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR--ADASFD 456
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
L F RM+ G D T LL C +G D GR + + + D KM +
Sbjct: 457 L---FSRMRKIGIQPDDITFVGLLSA-CSHSGMLDLGRHIFRTMTQ---DYKMTPKLEHY 509
Query: 279 SSLIDMYSRS 288
+ID+ S
Sbjct: 510 GCMIDLLGHS 519
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 327/615 (53%), Gaps = 35/615 (5%)
Query: 13 RYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQN-PFLTTRLVSAYAT 71
+H AT T LQ + + QQ H ++ GF + P T LV+ YA
Sbjct: 56 EHHNVATCIAT-------LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK 108
Query: 72 SGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYT 131
G + + LVF E ++V+ +N+LI+G+V N A+ +REM R++G +LPD YT
Sbjct: 109 CGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREM-RANG---ILPDKYT 163
Query: 132 LATISKVSG--ELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDE 189
++ K S EL D+ K + G + + ++ YS+ DA KVFDE
Sbjct: 164 FPSLLKGSDAMELSDV---KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDE 220
Query: 190 MPQRNVGS-FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGK 248
+P R+ +N +++G++ + F D F +M+ EG TI S+L
Sbjct: 221 LPDRDDSVLWNALVNGYSQIFRFE-----DALLVFSKMREEGVGVSRHTITSVLSAFT-V 274
Query: 249 TGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV 308
+G D GR +H VK G GSD+ + ++LIDMY +SK L + +F+ M R+L+
Sbjct: 275 SGDIDNGRSIHGLAVKTG----SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT 330
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
W +++ + G + L L M + G+RP+ V+L +VLP C L L G++IH +
Sbjct: 331 WNSVLCVHDYCGDHDGTLALFERM-LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Query: 369 TKVEL----NGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
L + + + N+L+DMY KCG L A VFD++ +D+ +W+ MI+ YG+
Sbjct: 390 IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR-VKDSASWNIMINGYGVQSC 448
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
GE A+ + M + G+KPD IT V +L ACS SG ++EG + T Y + PT + A
Sbjct: 449 GELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA 508
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE 544
CV+DMLGR+ +L++A E P+ P VW S+L++ +HGN +A + L ELEPE
Sbjct: 509 CVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPE 568
Query: 545 NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPS 604
+ Y+ +SN Y +++ V +VR M+++ +KK PG SWI + H+F G++ HP
Sbjct: 569 HCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPE 628
Query: 605 SSLIYDMLDDLVAIM 619
I+D L +++ M
Sbjct: 629 FKSIHDWLSLVISHM 643
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 312/579 (53%), Gaps = 25/579 (4%)
Query: 30 LLQLTVDHRAHRLTQQCHAQIL-TNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
LL+ + + RL + HA+I+ T PFL L++ Y+ +RLV A+
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
NV W SLI+G +N F ALV F EM R + V+P+D+T K L+ V G
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRR----EGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASL 208
K I + S MY + DA K+FDE+P+RN+ ++N IS +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 209 GNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW---DYGRELHCYLVKN 265
G + + FRR+ +G+ ++ T + L C W + G +LH ++++
Sbjct: 188 GR--PREAIEAFIEFRRI--DGH-PNSITFCAFLNAC----SDWLHLNLGMQLHGLVLRS 238
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
G D +DV + + LID Y + K++ S +F +M ++N W +++ YVQN E A
Sbjct: 239 GFD----TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
+L + KD + + + SVL ACA + GL +G+ IHA + K + + +AL+D
Sbjct: 295 SVLYLRSR-KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVD 353
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI--KPD 443
MY KCG ++ + + FD + ++ +T +S+I Y G+ + A+ +++M G P+
Sbjct: 354 MYGKCGCIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPN 412
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
+T VS+LSACS++G V+ GM I++S+ + Y ++P E +C+VDMLGR+G +++A EFI
Sbjct: 413 YMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI 472
Query: 504 KGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWD 563
K MP+ P SVWG+L A MHG LA L +L+P++ N++ LSNT+A+ RW
Sbjct: 473 KKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWA 532
Query: 564 VVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAH 602
VR +K G+KK G SWIT+ H+F D++H
Sbjct: 533 EANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSH 571
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 322/617 (52%), Gaps = 20/617 (3%)
Query: 5 KTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTR 64
+ F+L R+H + T LL +L VDH+ + + H ++ GF +
Sbjct: 230 RIFSLMR-RFHDEVNS-TTVSTLLSVLG-HVDHQ--KWGRGIHGLVVKMGFDSVVCVCNT 284
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
L+ YA +G + LVF + K++ WNSL+ +V + AL L M S G
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS--GKS 342
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
V +T A + + + + G+++ G N++++MY + GE ++
Sbjct: 343 VNYVTFTSALAACFTPDFFE--KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 400
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
+V +MP+R+V ++N +I G+A F+ M+ EG +++ T+ S+L
Sbjct: 401 RVLLQMPRRDVVAWNALIGGYAE-----DEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 455
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
C + G+ LH Y+V G + SD H+ +SLI MY++ L S+ +F+ + +R
Sbjct: 456 CLLPGDLLERGKPLHAYIVSAGFE----SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
N+ W AM+ +G E+ L L+ +M+ G+ ++ S L A A L L G+Q+
Sbjct: 512 NIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
H + K+ D+ +FNA DMYSKCG + ++ S R +W+ +ISA G HG
Sbjct: 571 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGY 629
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
EE T+ +ML++GIKP +T VS+L+ACS GLVD+G+ Y+ + + ++P +E C
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE 544
CV+D+LGRSG+L +A FI MP+ P VW SLL + +HGN A L +LEPE
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
Query: 545 NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPS 604
+ S Y+ SN +A+ RW+ V VR M + +KK SW+ + SF +GD+ HP
Sbjct: 750 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 809
Query: 605 SSLIYDMLDDLVAIMTD 621
+ IY L+D+ ++ +
Sbjct: 810 TMEIYAKLEDIKKLIKE 826
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 238/492 (48%), Gaps = 31/492 (6%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L +Q Q++ +G + L+S + G+++ + +F + ++ WNS+ Y
Sbjct: 161 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+N + +F M R H D V + T++T+ V G + +G+ I G
Sbjct: 221 QNGHIEESFRIFSLMRRFH--DEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 276
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+++ MY+ G +A VF +MP +++ S+N +++ + + G G L C
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG--LLC 334
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
M G + + T S L C ++ GR LH +V +GL +G++L
Sbjct: 335 ---SMISSGKSVNYVTFTSALAACF-TPDFFEKGRILHGLVVVSGLFYNQ----IIGNAL 386
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+ MY + ++ SRRV QM R++ W A+I GY ++ P+ AL + M++ +G+ N
Sbjct: 387 VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV-EGVSSN 445
Query: 342 KVSLISVLPACALLGGLIV-GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
++++SVL AC L G L+ GK +HA+ D + N+LI MY+KCG L + +F
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
+ + R+ ITW++M++A HG GEE + KM G+ D + LSA +K ++
Sbjct: 506 NGLDN-RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 564
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV------ 514
+EG ++ L + + I DM + G++ E +K +P PSV
Sbjct: 565 EEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLP----PSVNRSLPS 616
Query: 515 WGSLLTASVMHG 526
W L++A HG
Sbjct: 617 WNILISALGRHG 628
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 227/483 (46%), Gaps = 17/483 (3%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H + +G + +++T ++ Y G ++ SR VF + +NV W SL+ GY
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
E + +++ M R G C ++ +++ + G L+D G+ I G+
Sbjct: 123 EPEEVIDIYKGM-RGEGVGC---NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
NS+++M G A +FD+M +R+ S+N + + +A G+ + ++ R
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF--RIFSLMR 236
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
R E ++ T+++LL V G +GR +H +VK G D S V + ++L+ M
Sbjct: 237 RFHDE---VNSTTVSTLLSV-LGHVDHQKWGRGIHGLVVKMGFD----SVVCVCNTLLRM 288
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
Y+ + + V + VF QM +++L W +++ +V +G DAL LL M + G N V+
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVT 347
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
S L AC G+ +H L + + NAL+ MY K G + + RV +
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
RD + W+++I Y ++A+ +Q M G+ + ITVVSVLSAC G + E
Sbjct: 408 R-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
++ I + + ++ M + G L + + G+ + W ++L A+
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAH 525
Query: 525 HGN 527
HG+
Sbjct: 526 HGH 528
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 20/404 (4%)
Query: 190 MPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKT 249
MP RN S+N M+SG +G + FFR+M G +F IASL+ CG++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGME-----FFRKMCDLGIKPSSFVIASLV-TACGRS 54
Query: 250 GK-WDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV 308
G + G ++H ++ K+GL SDV++ ++++ +Y + SR+VF++M RN+
Sbjct: 55 GSMFREGVQVHGFVAKSGLL----SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 110
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
WT+++ GY G PE+ + + + M+ +G+ N+ S+ V+ +C LL +G+QI
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 169
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEA 428
K L ++ N+LI M G++DYA+ +FD +S RD I+W+S+ +AY +G EE+
Sbjct: 170 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEES 228
Query: 429 VVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
+ M + + + TV ++LS G GI+ L+ + V +C ++
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG-LVVKMGFDSVVCVCNTLLR 287
Query: 489 MLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSN 548
M +G+ +A K MP S W SL+ + V G S+ L C + + N
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLIS-WNSLMASFVNDGRSLDA-LGLLCSM-ISSGKSVN 344
Query: 549 YISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNT 592
Y++ ++ A+ D + R + GL V G+ + I GN
Sbjct: 345 YVTFTSALAACFTPDFFEKGRIL---HGLVVVSGLFYNQIIGNA 385
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 193/426 (45%), Gaps = 28/426 (6%)
Query: 88 KNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVL---PDDYTLATISKVSGELQD 144
+N WN++++G V+ + + FR+M C L P + +A++ G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKM-------CDLGIKPSSFVIASLVTACGRSGS 56
Query: 145 LVY-GKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
+ G + G + +++ +Y G + KVF+EMP RNV S+ ++
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
G++ G ++ ++ M+ EG + ++ SL+ CG GR++ +V
Sbjct: 117 GYSDKGEPE-----EVIDIYKGMRGEGVGCNENSM-SLVISSCGLLKDESLGRQIIGQVV 170
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
K+GL+ K+ + +SLI M + + +FDQM R+ W ++ Y QNG E
Sbjct: 171 KSGLESKLAVE----NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 226
Query: 324 DALILLREM-QMKDGMRPNKVS-LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN 381
++ + M + D + VS L+SVL + G+ IH K+ + + N
Sbjct: 227 ESFRIFSLMRRFHDEVNSTTVSTLLSVL---GHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
L+ MY+ G A+ VF + +D I+W+S+++++ GR +A+ M+ G
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
+ +T S L+AC ++G I + L+ + I +V M G+ G++ ++
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 502 FIKGMP 507
+ MP
Sbjct: 402 VLLQMP 407
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 322/617 (52%), Gaps = 20/617 (3%)
Query: 5 KTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTR 64
+ F+L R+H + T LL +L VDH+ + + H ++ GF +
Sbjct: 247 RIFSLMR-RFHDEVNS-TTVSTLLSVLG-HVDHQ--KWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
L+ YA +G + LVF + K++ WNSL+ +V + AL L M S G
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS--GKS 359
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
V +T A + + + + G+++ G N++++MY + GE ++
Sbjct: 360 VNYVTFTSALAACFTPDFFE--KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
+V +MP+R+V ++N +I G+A F+ M+ EG +++ T+ S+L
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAE-----DEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
C + G+ LH Y+V G + SD H+ +SLI MY++ L S+ +F+ + +R
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFE----SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
N+ W AM+ +G E+ L L+ +M+ G+ ++ S L A A L L G+Q+
Sbjct: 529 NIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
H + K+ D+ +FNA DMYSKCG + ++ S R +W+ +ISA G HG
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGY 646
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
EE T+ +ML++GIKP +T VS+L+ACS GLVD+G+ Y+ + + ++P +E C
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE 544
CV+D+LGRSG+L +A FI MP+ P VW SLL + +HGN A L +LEPE
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Query: 545 NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPS 604
+ S Y+ SN +A+ RW+ V VR M + +KK SW+ + SF +GD+ HP
Sbjct: 767 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 826
Query: 605 SSLIYDMLDDLVAIMTD 621
+ IY L+D+ ++ +
Sbjct: 827 TMEIYAKLEDIKKLIKE 843
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 238/492 (48%), Gaps = 31/492 (6%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L +Q Q++ +G + L+S + G+++ + +F + ++ WNS+ Y
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+N + +F M R H D V + T++T+ V G + +G+ I G
Sbjct: 238 QNGHIEESFRIFSLMRRFH--DEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+++ MY+ G +A VF +MP +++ S+N +++ + + G G L C
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG--LLC 351
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
M G + + T S L C ++ GR LH +V +GL +G++L
Sbjct: 352 ---SMISSGKSVNYVTFTSALAACF-TPDFFEKGRILHGLVVVSGLFYNQ----IIGNAL 403
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+ MY + ++ SRRV QM R++ W A+I GY ++ P+ AL + M++ +G+ N
Sbjct: 404 VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV-EGVSSN 462
Query: 342 KVSLISVLPACALLGGLIV-GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
++++SVL AC L G L+ GK +HA+ D + N+LI MY+KCG L + +F
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
+ + R+ ITW++M++A HG GEE + KM G+ D + LSA +K ++
Sbjct: 523 NGLDN-RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 581
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV------ 514
+EG ++ L + + I DM + G++ E +K +P PSV
Sbjct: 582 EEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLP----PSVNRSLPS 633
Query: 515 WGSLLTASVMHG 526
W L++A HG
Sbjct: 634 WNILISALGRHG 645
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 227/483 (46%), Gaps = 17/483 (3%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H + +G + +++T ++ Y G ++ SR VF + +NV W SL+ GY
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
E + +++ M R G C ++ +++ + G L+D G+ I G+
Sbjct: 140 EPEEVIDIYKGM-RGEGVGC---NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 195
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
NS+++M G A +FD+M +R+ S+N + + +A G+ + ++ R
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF--RIFSLMR 253
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
R E ++ T+++LL V G +GR +H +VK G D S V + ++L+ M
Sbjct: 254 RFHDE---VNSTTVSTLLSV-LGHVDHQKWGRGIHGLVVKMGFD----SVVCVCNTLLRM 305
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
Y+ + + V + VF QM +++L W +++ +V +G DAL LL M + G N V+
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVT 364
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
S L AC G+ +H L + + NAL+ MY K G + + RV +
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
RD + W+++I Y ++A+ +Q M G+ + ITVVSVLSAC G + E
Sbjct: 425 R-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
++ I + + ++ M + G L + + G+ + W ++L A+
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAH 542
Query: 525 HGN 527
HG+
Sbjct: 543 HGH 545
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 213/421 (50%), Gaps = 20/421 (4%)
Query: 173 MYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN 232
MY++ G A +FD MP RN S+N M+SG +G + FFR+M G
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGME-----FFRKMCDLGIK 55
Query: 233 ADAFTIASLLPVCCGKTGK-WDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKL 291
+F IASL+ CG++G + G ++H ++ K+GL SDV++ ++++ +Y +
Sbjct: 56 PSSFVIASLV-TACGRSGSMFREGVQVHGFVAKSGLL----SDVYVSTAILHLYGVYGLV 110
Query: 292 VLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPA 351
SR+VF++M RN+ WT+++ GY G PE+ + + + M+ +G+ N+ S+ V+ +
Sbjct: 111 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR-GEGVGCNENSMSLVISS 169
Query: 352 CALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAIT 411
C LL +G+QI K L ++ N+LI M G++DYA+ +FD +S RD I+
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTIS 228
Query: 412 WSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLI 471
W+S+ +AY +G EE+ + M + + + TV ++LS G GI+ L+
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG-LV 287
Query: 472 TRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTR 531
+ V +C ++ M +G+ +A K MP S W SL+ + V G S+
Sbjct: 288 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMASFVNDGRSLDA 346
Query: 532 DLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGN 591
L C + + NY++ ++ A+ D + R + GL V G+ + I GN
Sbjct: 347 -LGLLCSM-ISSGKSVNYVTFTSALAACFTPDFFEKGRIL---HGLVVVSGLFYNQIIGN 401
Query: 592 T 592
Sbjct: 402 A 402
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 201/445 (45%), Gaps = 28/445 (6%)
Query: 69 YATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVL-- 126
Y G + +R +F + +N WN++++G V+ + + FR+M C L
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-------CDLGI 54
Query: 127 -PDDYTLATISKVSGELQDLVY-GKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
P + +A++ G + G + G + +++ +Y G +
Sbjct: 55 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 114
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
KVF+EMP RNV S+ ++ G++ G ++ ++ M+ EG + ++ SL+
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPE-----EVIDIYKGMRGEGVGCNENSM-SLVIS 168
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
CG GR++ +VK+GL+ K+ + +SLI M + + +FDQM R
Sbjct: 169 SCGLLKDESLGRQIIGQVVKSGLESKLAVE----NSLISMLGSMGNVDYANYIFDQMSER 224
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREM-QMKDGMRPNKVS-LISVLPACALLGGLIVGK 362
+ W ++ Y QNG E++ + M + D + VS L+SVL + G+
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL---GHVDHQKWGR 281
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
IH K+ + + N L+ MY+ G A+ VF + +D I+W+S+++++
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVND 340
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI 482
GR +A+ M+ G + +T S L+AC ++G I + L+ + I
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQII 399
Query: 483 CACVVDMLGRSGQLDQALEFIKGMP 507
+V M G+ G++ ++ + MP
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMP 424
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 285/518 (55%), Gaps = 27/518 (5%)
Query: 111 VLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSV 170
+L R G + D T+ K + L+ G+++ N++
Sbjct: 42 LLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTL 101
Query: 171 MAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG 230
+ MY++CG +A KVF++MPQR+ ++ +ISG++ D FF +M G
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ-----HDRPCDALLFFNQMLRFG 156
Query: 231 YNADAFTIASLLPV-------CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
Y+ + FT++S++ CCG +LH + VK G D S+VH+GS+L+D
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCG--------HQLHGFCVKCGFD----SNVHVGSALLD 204
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+Y+R + ++ VFD ++SRN W A+I G+ + E AL L + M ++DG RP+
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSHF 263
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
S S+ AC+ G L GK +HA+ K N L+DMY+K GS+ A ++FD +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ RD ++W+S+++AY HG G+EAV +++M ++GI+P+ I+ +SVL+ACS SGL+DEG
Sbjct: 324 AK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
Y L+ + + P VVD+LGR+G L++AL FI+ MP++P ++W +LL A
Sbjct: 383 WHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
MH N+ A + EL+P++P ++ L N YAS RW+ VR MKE G+KK P
Sbjct: 442 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 501
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
SW+ I H F D+ HP I ++++A + +
Sbjct: 502 SWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 198/398 (49%), Gaps = 19/398 (4%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HA IL + F + + L++ YA G L +R VF + ++ W +LI+GY ++
Sbjct: 83 HAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
AL+ F +M R P+++TL+++ K + + G + G
Sbjct: 143 CDALLFFNQMLRFGYS----PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC-FFRR 225
++++ +Y+R G DA VFD + RN S+N +I+G A SG + F+
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG------HARRSGTEKALELFQG 252
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
M +G+ F+ ASL C TG + G+ +H Y++K+G L + G++L+DMY
Sbjct: 253 MLRDGFRPSHFSYASLFGA-CSSTGFLEQGKWVHAYMIKSGEKLVAFA----GNTLLDMY 307
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
++S + +R++FD++ R++ W +++ Y Q+G ++A+ EM+ + G+RPN++S
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR-RVGIRPNEISF 366
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
+SVL AC+ G L G + K + + + ++D+ + G L+ A R + +
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
A W ++++A +H E + + +L PD
Sbjct: 427 EPTAAIWKALLNACRMHKNTELGAYAAEHVFEL--DPD 462
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 15/273 (5%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
Q H + GF N + + L+ Y G ++ ++LVF ++E++N WN+LI G+ +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
AL LF+ M R D P ++ A++ L GK +
Sbjct: 241 SGTEKALELFQGMLR----DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
N+++ MY++ G DA K+FD + +R+V S+N +++ +A G G + +F
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG-----FGKEAVWWF 351
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M+ G + + S+L C +G D G + + K+G+ + V +++D
Sbjct: 352 EEMRRVGIRPNEISFLSVL-TACSHSGLLDEGWHYYELMKKDGIVPEAWHYV----TVVD 406
Query: 284 MYSRSKKLVLSRRVFDQMK-SRNLYVWTAMING 315
+ R+ L + R ++M +W A++N
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 300/556 (53%), Gaps = 17/556 (3%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
LV+ Y +R VF ++ ++ +N++I GY+K ++ +F E D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-----NLDQ 302
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
PD T++++ + G L+DL K I N ++ +Y++CG+ A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
VF+ M ++ S+N +ISG+ G+ F+ M AD T L+ V
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMK-----LFKMMMIMEEQADHITYLMLISV 417
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
+ +G+ LH +K+G+ + D+ + ++LIDMY++ ++ S ++F M +
Sbjct: 418 ST-RLADLKFGKGLHSNGIKSGICI----DLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
+ W +I+ V+ G L + +M+ K + P+ + + LP CA L +GK+I
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMR-KSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
H + + + NALI+MYSKCG L+ +SRVF+ +S RD +TW+ MI AYG++G
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR-RDVVTWTGMIYAYGMYGE 590
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
GE+A+ T+ M + GI PD + ++++ ACS SGLVDEG+ + + T Y++ P +E A
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE 544
CVVD+L RS ++ +A EFI+ MP+ P S+W S+L A G+ T + R ++EL P+
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 545 NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPS 604
+P I SN YA+ ++WD V+ +R +K++ + K PG SWI + N H F+ GD + P
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQ 770
Query: 605 SSLIYDMLDDLVAIMT 620
S IY L+ L ++M
Sbjct: 771 SEAIYKSLEILYSLMA 786
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 254/489 (51%), Gaps = 22/489 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE-AKNVYLWNSLINGYVK 102
++ HA +++ G + F + +L+ Y+ + S VF + AKNVYLWNS+I + K
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
N F AL + ++ S V PD YT ++ K L D G L+ +
Sbjct: 84 NGLFPEALEFYGKLRESK----VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
N+++ MYSR G A +VFDEMP R++ S+N +ISG++S G +
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE-----I 194
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
+ ++ D+FT++S+LP G G+ LH + +K+ + S V + + L+
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKS----GVNSVVVVNNGLV 249
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
MY + ++ +RRVFD+M R+ + MI GY++ E+++ + ++ D +P+
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDL 307
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+++ SVL AC L L + K I+ + K ++++ N LID+Y+KCG + A VF++
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ +D ++W+S+IS Y G EA+ ++ M+ + + D IT + ++S ++ +
Sbjct: 368 ME-CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV-WGSLLTA 521
G G++++ I + + + + ++DM + G++ +L+ M G +V W ++++A
Sbjct: 427 GKGLHSNGI-KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM--GTGDTVTWNTVISA 483
Query: 522 SVMHGNSMT 530
V G+ T
Sbjct: 484 CVRFGDFAT 492
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 237/481 (49%), Gaps = 19/481 (3%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
+ QIL GF + F+ LV Y+ G L +R VF + +++ WNSLI+GY + +
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
AL ++ E+ S ++PD +T++++ G L + G+ + G +
Sbjct: 189 EEALEIYHELKNSW----IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N ++AMY + DA +VFDEM R+ S+N MI G+ L + + F +
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES----VRMFLENL 300
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ + D T++S+L CG + ++ Y++K G L + + + LID+Y+
Sbjct: 301 --DQFKPDLLTVSSVLRA-CGHLRDLSLAKYIYNYMLKAGFVL----ESTVRNILIDVYA 353
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ ++ +R VF+ M+ ++ W ++I+GY+Q+G +A+ L + M + + + + ++ +
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYL 412
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
++ L L GK +H+ K + D S+ NALIDMY+KCG + + ++F ++
Sbjct: 413 MLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT- 471
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
D +TW+++ISA G + +M + + PDM T + L C+ G I
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 467 YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ L+ R+ + ++I +++M + G L+ + + M W ++ A M+G
Sbjct: 532 HCCLL-RFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYG 589
Query: 527 N 527
Sbjct: 590 E 590
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 200/409 (48%), Gaps = 22/409 (5%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLI 97
R L + + +L GF + L+ YA GD+ +R VF+S+E K+ WNS+I
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 98 NGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXX 157
+GY+++ + A+ LF+ M D T + VS L DL +GK +
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQ----ADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
+N+++ MY++CGE GD++K+F M + ++N +IS G+FA +G
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA--TGL 494
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
+ R+ + D T LP+C K G+E+HC L++ G + S++ +
Sbjct: 495 QVTTQMRKSEVV---PDMATFLVTLPMCASLAAK-RLGKEIHCCLLRFGYE----SELQI 546
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
G++LI+MYS+ L S RVF++M R++ WT MI Y G E AL +M+ K G
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME-KSG 605
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFS---TKVELNGDTSLFNALIDMYSKCGSLD 394
+ P+ V I+++ AC+ G +V + + F T +++ + ++D+ S+ +
Sbjct: 606 IVPDSVVFIAIIYACSHSG--LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKIS 663
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
A + DA W+S++ A G E A +++++L PD
Sbjct: 664 KAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN--PD 710
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 189/376 (50%), Gaps = 24/376 (6%)
Query: 174 YSRCGEFGDAMKVFDEM-PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN 232
YS E ++ VF + P +NV +N +I ++ G F F+ +++ +
Sbjct: 49 YSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-----FYGKLRESKVS 103
Query: 233 ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLV 292
D +T S++ C G + E+ + + LD+ SD+ +G++L+DMYSR L
Sbjct: 104 PDKYTFPSVIKACAGL-----FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLT 158
Query: 293 LSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
+R+VFD+M R+L W ++I+GY +G E+AL + E++ + P+ ++ SVLPA
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPA- 216
Query: 353 ALLGGLIVGKQ---IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDA 409
G L+V KQ +H F+ K +N + N L+ MY K A RVFD + RD+
Sbjct: 217 --FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD-VRDS 273
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNS 469
+++++MI Y EE+V + + L KPD++TV SVL AC + IYN
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 470 LITR-YQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
++ + ++ TV ++D+ + G + A + M S W S+++ + G+
Sbjct: 333 MLKAGFVLESTVR--NILIDVYAKCGDMITARDVFNSMECKDTVS-WNSIISGYIQSGDL 389
Query: 529 MTRDLAYRCLLELEPE 544
M ++ ++ +E +
Sbjct: 390 MEAMKLFKMMMIMEEQ 405
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 318/592 (53%), Gaps = 16/592 (2%)
Query: 25 HNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHS 84
+N LL++ D R+ ++ H ++ +GF+ + F T L + YA +N +R VF
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 85 IEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD 144
+ +++ WN+++ GY +N AL EM +S + + P T+ ++ L+
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMAL----EMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
+ GK I G + + +++ MY++CG A ++FD M +RNV S+N MI
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
+ N + F++M EG ++ L C G + GR +H V+
Sbjct: 312 YVQNEN-----PKEAMLIFQKMLDEGVKPTDVSVMGALHAC-ADLGDLERGRFIHKLSVE 365
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPED 324
GLD +V + +SLI MY + K++ + +F +++SR L W AMI G+ QNG P D
Sbjct: 366 LGLD----RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALI 384
AL +M+ + ++P+ + +SV+ A A L K IH + L+ + + AL+
Sbjct: 422 ALNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 385 DMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDM 444
DMY+KCG++ A +FD +S R TW++MI YG HG G+ A+ +++M + IKP+
Sbjct: 481 DMYAKCGAIMIARLIFDMMSE-RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 445 ITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
+T +SV+SACS SGLV+ G+ + + Y ++ +++ +VD+LGR+G+L++A +FI
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 505 GMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDV 564
MP+ P +V+G++L A +H N + A L EL P++ ++ L+N Y + W+
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEK 659
Query: 565 VTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
V +VR M +GL+K PG S + I HSF G AHP S IY L+ L+
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 257/501 (51%), Gaps = 29/501 (5%)
Query: 36 DHRAHRLTQQCHA-----QIL----TNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
+H A L ++C + QIL NG Q F T+LVS + G ++ + VF I+
Sbjct: 37 EHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
+K L+++++ G+ K + AL F M D V P Y + KV G+ +L
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY----DDVEPVVYNFTYLLKVCGDEAELR 152
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
GK I G + MY++C + +A KVFD MP+R++ S+N +++G++
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAF-TIASLLPVCCGKTGKWDYGRELHCYLVKN 265
G + + CE +F TI S+LP G+E+H Y +++
Sbjct: 213 QNGM------ARMALEMVKSMCEENLKPSFITIVSVLPAVSA-LRLISVGKEIHGYAMRS 265
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
G D S V++ ++L+DMY++ L +R++FD M RN+ W +MI+ YVQN P++A
Sbjct: 266 GFD----SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
+++ ++M + +G++P VS++ L ACA LG L G+ IH S ++ L+ + S+ N+LI
Sbjct: 322 MLIFQKM-LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMI 445
MY KC +D A+ +F + R ++W++MI + +GR +A+ + +M +KPD
Sbjct: 381 MYCKCKEVDTAASMFGKLQS-RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKG 505
T VSV++A ++ + I+ ++ R + V + +VDM + G + A I
Sbjct: 440 TYVSVITAIAELSITHHAKWIH-GVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFD 497
Query: 506 MPLDPGPSVWGSLLTASVMHG 526
M + + W +++ HG
Sbjct: 498 MMSERHVTTWNAMIDGYGTHG 518
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 309/580 (53%), Gaps = 18/580 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H ++ G +P++ T L+S Y+ G + + VF + K + +WN+++ Y +N
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
AL LF M + VLPD +TL+ + L YGK + +
Sbjct: 352 DYGYSALDLFGFMRQKS----VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQST 407
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNF--ASTSGGDLWC 221
++++ +YS+CG DA VF M ++++ ++ +ISG G F A GD+
Sbjct: 408 STIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM-- 465
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
+ + D+ + S+ C G +G ++H ++K GL L +V +GSSL
Sbjct: 466 ---KDDDDSLKPDSDIMTSVTNACAGLEA-LRFGLQVHGSMIKTGLVL----NVFVGSSL 517
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
ID+YS+ ++ +VF M + N+ W +MI+ Y +N PE ++ L M + G+ P+
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM-LSQGIFPD 576
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
VS+ SVL A + L+ GK +H ++ ++ + DT L NALIDMY KCG YA +F
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ + + ITW+ MI YG HG A+ + +M + G PD +T +S++SAC+ SG V+
Sbjct: 637 KMQH-KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVE 695
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
EG I+ + Y ++P +E A +VD+LGR+G L++A FIK MP++ S+W LL+A
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
S H N L+ LL +EPE S Y+ L N Y + ++ +MKE+GL K P
Sbjct: 756 SRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQP 815
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
G SWI +S T+ F G + P + I+++L+ L + M D
Sbjct: 816 GCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 238/486 (48%), Gaps = 30/486 (6%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVF-------HSIEAKNVYLWNSLING 99
H ++ G+ +PF+ T LV+ Y G L+ + VF + A++V +WNS+I+G
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 100 YVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDL--VYGKLIPGKSXX 157
Y K R F + FR M G V PD ++L+ + V + + GK I G
Sbjct: 143 YFKFRRFKEGVGCFRRM-LVFG---VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR-NVGSFNVMISGWASLGNFASTSG 216
+++ MY + G DA +VF E+ + NV +NVMI G+ G+ S
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG--GSGICESS 256
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
DL+ + + + +FT A C ++ +GR++HC +VK GL +D +
Sbjct: 257 LDLYMLAKNNSVK-LVSTSFTGA---LGACSQSENSGFGRQIHCDVVKMGLH----NDPY 308
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
+ +SL+ MYS+ + + VF + + L +W AM+ Y +N AL L M+ K
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
+ P+ +L +V+ C++LG GK +HA K + +++ +AL+ +YSKCG A
Sbjct: 369 -VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML--QLGIKPDMITVVSVLSAC 454
VF ++ +D + W S+IS +G+ +EA+ + M +KPD + SV +AC
Sbjct: 428 YLVFKSMEE-KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
+ + G+ ++ S+I + + V + + ++D+ + G + AL+ M +
Sbjct: 487 AGLEALRFGLQVHGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVA 544
Query: 515 WGSLLT 520
W S+++
Sbjct: 545 WNSMIS 550
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 211/443 (47%), Gaps = 27/443 (6%)
Query: 94 NSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPG 153
NS I ++ E+ AL L+ + G +T ++ K L +L YGK I G
Sbjct: 28 NSGIRALIQKGEYLQALHLY---SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 154 KSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQ-------RNVGSFNVMISGWA 206
A S++ MY +CG A++VFD Q R+V +N MI G+
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW--DYGRELHCYLVK 264
F G C FRRM G DAF+++ ++ V C K G + + G+++H ++++
Sbjct: 145 KFRRFKEGVG----C-FRRMLVFGVRPDAFSLSIVVSVMC-KEGNFRREEGKQIHGFMLR 198
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGYVQNGAPE 323
N LD +D L ++LIDMY + + + RVF +++ + N+ +W MI G+ +G E
Sbjct: 199 NSLD----TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
+L L + + ++ S L AC+ G+QIH K+ L+ D + +L
Sbjct: 255 SSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
+ MYSKCG + A VF V R I W++M++AY + G A+ + M Q + PD
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEI-WNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
T+ +V+S CS GL + G ++ L R ++ T I + ++ + + G A
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 504 KGMPLDPGPSVWGSLLTASVMHG 526
K M + WGSL++ +G
Sbjct: 432 KSME-EKDMVAWGSLISGLCKNG 453
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 307/599 (51%), Gaps = 21/599 (3%)
Query: 17 SATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLN 76
SAT+ + L + TV+H +Q H ++ + + FL L+
Sbjct: 8 SATSKVQQIKTLISVACTVNH-----LKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK 62
Query: 77 MSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATIS 136
S L+F + N++L+NSLING+V N F L LF + R HG + +T +
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSI-RKHG---LYLHGFTFPLVL 118
Query: 137 KVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG 196
K G + S++++YS G DA K+FDE+P R+V
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGR 256
++ + SG+ + G DL F++M G D++ I +L C G D G
Sbjct: 179 TWTALFSGYTTSGR--HREAIDL---FKKMVEMGVKPDSYFIVQVLSACV-HVGDLDSGE 232
Query: 257 ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGY 316
++VK +++M + + ++L+++Y++ K+ +R VFD M +++ W+ MI GY
Sbjct: 233 ----WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 317 VQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD 376
N P++ + L +M +++ ++P++ S++ L +CA LG L +G+ + + E +
Sbjct: 289 ASNSFPKEGIELFLQM-LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML 436
+ NALIDMY+KCG++ VF + +D + ++ IS +G + + + +
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTE 406
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+LGI PD T + +L C +GL+ +G+ +N++ Y +K TVE C+VD+ GR+G L
Sbjct: 407 KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGML 466
Query: 497 DQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTY 556
D A I MP+ P VWG+LL+ + ++ + + L+ LEP N NY+ LSN Y
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIY 526
Query: 557 ASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
+ RWD EVR MM ++G+KK+PG SWI + G H F DK+HP S IY L+DL
Sbjct: 527 SVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDL 585
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 300/581 (51%), Gaps = 19/581 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+ HA ++ + F + F+ T V + ++ + VF + ++ WN++++G+ ++
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
A LFREM + + PD T+ T+ + + + L + +
Sbjct: 132 GHTDKAFSLFREMRLNE----ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQ--RNVGSFNVMISGWASLGNFASTSGGDLWC 221
AN+ ++ Y +CG+ A VF+ + + R V S+N M ++ G G L+C
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG--LYC 245
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
R E + D T +L C GR +H + + G D D+ ++
Sbjct: 246 LMLR---EEFKPDLSTFINL-AASCQNPETLTQGRLIHSHAIHLGTD----QDIEAINTF 297
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
I MYS+S+ +R +FD M SR WT MI+GY + G ++AL L M +K G +P+
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPD 356
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF-NALIDMYSKCGSLDYASRVF 400
V+L+S++ C G L GK I A + D + NALIDMYSKCGS+ A +F
Sbjct: 357 LVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
DN + +TW++MI+ Y L+G EA+ + KM+ L KP+ IT ++VL AC+ SG +
Sbjct: 417 DNTPE-KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSL 475
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
++G ++ + Y + P ++ +C+VD+LGR G+L++ALE I+ M P +WG+LL
Sbjct: 476 EKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLN 535
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
A +H N + A L LEP+ + Y+ ++N YA+ WD +R++MK+R +KK
Sbjct: 536 ACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKY 595
Query: 581 PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
PG S I ++G HSF VG+ H + +IY L+ L D
Sbjct: 596 PGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 200/442 (45%), Gaps = 23/442 (5%)
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
+V WN I V + +L+LFREM R GG P+++T ++K L D+
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKR--GG--FEPNNFTFPFVAKACARLADVGCC 71
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASL 208
+++ + + M+ +C A KVF+ MP+R+ ++N M+SG+
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 209 GNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD 268
G+ + FR M+ D+ T+ +L+ + + L + +
Sbjct: 132 GH-----TDKAFSLFREMRLNEITPDSVTVMTLIQSA-------SFEKSLKLLEAMHAVG 179
Query: 269 LKMGSDVH--LGSSLIDMYSRSKKLVLSRRVFDQMK--SRNLYVWTAMINGYVQNGAPED 324
+++G DV + ++ I Y + L ++ VF+ + R + W +M Y G D
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALI 384
A L M +++ +P+ + I++ +C L G+ IH+ + + + D N I
Sbjct: 240 AFGLYCLM-LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 385 DMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDM 444
MYSK A +FD ++ R ++W+ MIS Y G +EA+ + M++ G KPD+
Sbjct: 299 SMYSKSEDTCSARLLFDIMTS-RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 445 ITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
+T++S++S C K G ++ G I + V IC ++DM + G + +A +
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 505 GMPLDPGPSVWGSLLTASVMHG 526
P + W +++ ++G
Sbjct: 418 NTP-EKTVVTWTTMIAGYALNG 438
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 192/433 (44%), Gaps = 31/433 (7%)
Query: 22 ITPHNL--LELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
ITP ++ + L+Q ++ +L + HA + G + +S Y GDL+ ++
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 208
Query: 80 LVFHSIEA--KNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISK 137
LVF +I+ + V WNS+ Y E A L+ M R PD T ++
Sbjct: 209 LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE----FKPDLSTFINLAA 264
Query: 138 VSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS 197
+ L G+LI + N+ ++MYS+ + A +FD M R S
Sbjct: 265 SCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGK-----TGKW 252
+ VMISG+A G+ + F M G D T+ SL+ CGK TGKW
Sbjct: 325 WTVMISGYAEKGDM-----DEALALFHAMIKSGEKPDLVTLLSLIS-GCGKFGSLETGKW 378
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM 312
R Y K +V + ++LIDMYS+ + +R +FD + + WT M
Sbjct: 379 IDARA-DIYGCKR-------DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG-KQIHAFSTKV 371
I GY NG +AL L +M D +PN ++ ++VL ACA G L G + H
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
++ ++ ++D+ + G L+ A + N+S DA W ++++A +H + A
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 432 YQKMLQLGIKPDM 444
+ + L +P M
Sbjct: 550 AESLFNL--EPQM 560
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 292 VLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPA 351
++ RR++ ++ W I V P ++L+L REM+ + G PN + V A
Sbjct: 3 LIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKA 61
Query: 352 CALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAIT 411
CA L + + +HA K D + A +DM+ KC S+DYA++VF+ + RDA T
Sbjct: 62 CARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE-RDATT 120
Query: 412 WSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS--KSGLVDEGMGIYNS 469
W++M+S + G ++A +++M I PD +TV++++ + S KS + E M ++
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAM---HA 177
Query: 470 LITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL-DPGPSVWGSLLTASVMHGNS 528
+ R + V + + G+ G LD A + + D W S+ A + G +
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Query: 529 MTRDLAYRCLLELEPENP--SNYISLSNTYASYKRWDVVTEVR 569
Y CL+ E P S +I+L+ AS + + +T+ R
Sbjct: 238 FDAFGLY-CLMLREEFKPDLSTFINLA---ASCQNPETLTQGR 276
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 200/638 (31%), Positives = 333/638 (52%), Gaps = 53/638 (8%)
Query: 21 FITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQ-NPFLTTRLVSAYATSGDLNMSR 79
+ T N+L + + A R +Q H+ ++ + Q + F+ LVS Y G + +
Sbjct: 224 YATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAA 283
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
+F + +K++ WN +I GY N E+ A LF + H GD V PD T+ +I V
Sbjct: 284 SLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL--VHKGD-VSPDSVTIISILPVC 340
Query: 140 GELQDLVYGKLIPGKSXXXXXXXX-XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSF 198
+L DL GK I N++++ Y+R G+ A F M +++ S+
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 199 NVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGREL 258
N ++ +A S + E D+ TI SLL C G +E+
Sbjct: 401 NAILDAFAD-----SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV-KEV 454
Query: 259 HCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK--------LVLSRR-------------- 296
H Y VK GL L + LG++L+D Y++ L LS R
Sbjct: 455 HGYSVKAGL-LHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 297 ----------VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+F +M + +L W+ M+ Y ++ P +A+ + RE+Q + GMRPN V+++
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR-GMRPNTVTIM 572
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
++LP CA L L + +Q H + + L GD L L+D+Y+KCGSL +A VF + +
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDAR- 630
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
RD + +++M++ Y +HGRG+EA++ Y M + IKPD + + ++L+AC +GL+ +G+ I
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 467 YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
Y+S+ T + MKPT+E AC VD++ R G+LD A F+ MP++P ++WG+LL A +
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY- 749
Query: 527 NSMTRDLAYRC---LLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
N M DL + LL+ E ++ N++ +SN YA+ +W+ V E+R +MK++ +KK G
Sbjct: 750 NRM--DLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGC 807
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
SW+ + G + F GD +HP I+D+++ L M +
Sbjct: 808 SWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 176/379 (46%), Gaps = 20/379 (5%)
Query: 128 DDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVF 187
D + K + DL G+ + G + SV+ MY++C D K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 188 DEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ-CEGYNADAFTIASLLPVCC 246
+M + +N++++G + + G + FF+ M + + T A +LP+C
Sbjct: 80 RQMDSLDPVVWNIVLTG------LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 247 GKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL-SRRVFDQMKSRN 305
+ G G+ +H Y++K GL+ D +G++L+ MY++ + + FD + ++
Sbjct: 134 -RLGDSYNGKSMHSYIIKAGLE----KDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 306 LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV---GK 362
+ W A+I G+ +N DA M +K+ PN ++ +VLP CA + I G+
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLM-LKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 363 QIHAFSTKVE-LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
QIH++ + L + N+L+ Y + G ++ A+ +F + +D ++W+ +I+ Y
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS-KDLVSWNVVIAGYAS 306
Query: 422 HGRGEEAVVTYQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTV 480
+ +A + ++ G + PD +T++S+L C++ + G I++ ++ +
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 481 EICACVVDMLGRSGQLDQA 499
+ ++ R G A
Sbjct: 367 SVGNALISFYARFGDTSAA 385
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 246 CGKTGKWDYGRELHCYLVKNGLDLKMGSDV--HLGSSLIDMYSRSKKLVLSRRVFDQMKS 303
C GR LH G K+G + S+++MY++ +++ +++F QM S
Sbjct: 31 CASVSDLTSGRALH------GCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDS 84
Query: 304 RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ 363
+ VW ++ G + + + + M D +P+ V+ VLP C LG GK
Sbjct: 85 LDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 364 IHAFSTKVELNGDTSLFNALIDMYSKCGSL-DYASRVFDNVSYFRDAITWSSMISAYGLH 422
+H++ K L DT + NAL+ MY+K G + A FD ++ +D ++W+++I+ + +
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD-KDVVSWNAIIAGFSEN 202
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS---KSGLVDEGMGIYNSLITRYQMKPT 479
+A ++ ML+ +P+ T+ +VL C+ K+ G I++ ++ R ++
Sbjct: 203 NMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 480 VEICACVVDMLGRSGQLDQALEFIKGM 506
V +C +V R G++++A M
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 8/230 (3%)
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMY 387
++ ++ G + + V+ ACA + L G+ +H K+ + + ++++MY
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM-LQLGIKPDMIT 446
+KC +D ++F + D + W+ +++ + G E + ++ M KP +T
Sbjct: 67 AKCRRMDDCQKMFRQMDSL-DPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVT 124
Query: 447 VVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL-DQALEFIKG 505
VL C + G G +++ +I K T+ + +V M + G + A G
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTL-VGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 506 MPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNT 555
+ D W +++ A N M CL+ EP P NY +++N
Sbjct: 184 IA-DKDVVSWNAII-AGFSENNMMADAFRSFCLMLKEPTEP-NYATIANV 230
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 326/601 (54%), Gaps = 21/601 (3%)
Query: 23 TPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVF 82
T HN +LL+ +D R+ + A +L +GF ++LV A GD++ +R VF
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVF 122
Query: 83 HSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGEL 142
+ +++ WNSLI +K+R A+ ++R M ++ VLPD+YTL+++ K +L
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN----VLPDEYTLSSVFKAFSDL 178
Query: 143 QDLVYGKLIPGKSXXXXXXXXXXXANSVMA-MYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
+ G + S + MY + G+ +A V D + +++V +
Sbjct: 179 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITAL 238
Query: 202 ISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY 261
I G++ G F+ M E + +T AS+L + CG G+ +H
Sbjct: 239 IVGYSQKGEDTEAVKA-----FQSMLVEKVQPNEYTYASVL-ISCGNLKDIGNGKLIHGL 292
Query: 262 LVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGA 321
+VK+G + + S +SL+ MY R + S RVF ++ N WT++I+G VQNG
Sbjct: 293 MVKSGFESALASQ----TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 322 PEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN 381
E ALI R+M M+D ++PN +L S L C+ L G+QIH TK + D +
Sbjct: 349 EEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGS 407
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
LID+Y KCG D A VFD +S D I+ ++MI +Y +G G EA+ +++M+ LG++
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEV-DVISLNTMIYSYAQNGFGREALDLFERMINLGLQ 466
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
P+ +TV+SVL AC+ S LV+EG +++S + ++ T + AC+VD+LGR+G+L++A E
Sbjct: 467 PNDVTVLSVLLACNNSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEA-E 524
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKR 561
+ ++P +W +LL+A +H + R +LE+EP + I +SN YAS +
Sbjct: 525 MLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGK 584
Query: 562 WDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDK-AHPSSSLIYDMLDDLVAIMT 620
W+ V E+++ MK+ LKK P +SW+ I+ TH+F GD +HP+S I + L++L+
Sbjct: 585 WNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSK 644
Query: 621 D 621
D
Sbjct: 645 D 645
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 319/606 (52%), Gaps = 50/606 (8%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYAT--SGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
+Q H+Q +T G A NP +L + + G ++ + +F I +V +WN++I G+
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD---LVYGKLIPGKSXXX 158
K G + L+ M + + V PD +T + ++G +D L GK +
Sbjct: 111 KVDCDGEGVRLYLNMLK----EGVTPDSHTFPFL--LNGLKRDGGALACGKKLHCHVVKF 164
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
N+++ MYS CG A VFD + +V S+N+MISG+ + + + +
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI--E 222
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPV--CCGKTGKWDYGRELHCYL----------VKNG 266
L R N + T +LL V C K D + +H Y+ ++N
Sbjct: 223 LLVEMER------NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA 276
Query: 267 L----------DLKM-------GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVW 309
L D+ + DV +S++ Y L L+R FDQM R+ W
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
T MI+GY++ G ++L + REMQ GM P++ +++SVL ACA LG L +G+ I +
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQ-SAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 370 KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
K ++ D + NALIDMY KCG + A +VF ++ RD TW++M+ +G+G+EA+
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ-RDKFTWTAMVVGLANNGQGQEAI 454
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
+ +M + I+PD IT + VLSAC+ SG+VD+ + + + ++++P++ C+VDM
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
LGR+G + +A E ++ MP++P VWG+LL AS +H + +LA + +LELEP+N + Y
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVY 574
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIY 609
L N YA KRW + EVR + + +KK PG S I ++G H F GDK+H S IY
Sbjct: 575 ALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIY 634
Query: 610 DMLDDL 615
L++L
Sbjct: 635 MKLEEL 640
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 312/581 (53%), Gaps = 34/581 (5%)
Query: 43 TQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
+Q HAQI+ ++ + +L+SA + N++ VF+ ++ NV+L NSLI + +
Sbjct: 35 VKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQ 94
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
N + A +F EM R + D++T + K L K++
Sbjct: 95 NSQPYQAFFVFSEMQRFG----LFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 163 XXXXANSVMAMYSRCGEFG--DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
N+++ YSRCG G DAMK+F++M +R+ S+N M+ G G
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA------ 204
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL--KMGSDVHLG 278
RR+ E D + ++L Y R C + +L KM +
Sbjct: 205 ---RRLFDEMPQRDLISWNTMLD---------GYAR---CREMSKAFELFEKMPERNTVS 249
Query: 279 -SSLIDMYSRSKKLVLSRRVFDQMK--SRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
S+++ YS++ + ++R +FD+M ++N+ WT +I GY + G ++A L+ +M +
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM-VA 308
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
G++ + ++IS+L AC G L +G +IH+ + L + + NAL+DMY+KCG+L
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
A VF+++ +D ++W++M+ G+HG G+EA+ + +M + GI+PD +T ++VL +C+
Sbjct: 369 AFDVFNDIPK-KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVW 515
+GL+DEG+ + S+ Y + P VE C+VD+LGR G+L +A++ ++ MP++P +W
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 516 GSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKER 575
G+LL A MH L++L+P +P NY LSN YA+ + W+ V ++R+ MK
Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 547
Query: 576 GLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
G++K G S + + H F V DK+HP S IY ML L+
Sbjct: 548 GVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 311/589 (52%), Gaps = 28/589 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L +Q HAQ++ + + L++ Y ++ + VF+ I K++ W+S+I G+
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 102 K-NREFGHALVLFREM---GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXX 157
+ EF AL +EM G H P++Y + K L YG I G
Sbjct: 246 QLGFEF-EALSHLKEMLSFGVFH------PNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
S+ MY+RCG A +VFD++ + + S+NV+I+G A+ G
Sbjct: 299 SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG-----YAD 353
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG--KWDYGRELHCYLVKNGLDLKMGSDV 275
+ F +M+ G+ DA ++ SLL C +T G ++H Y++K G +D+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLL---CAQTKPMALSQGMQIHSYIIKWGF----LADL 406
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV-WTAMINGYVQNGAPEDALILLREMQM 334
+ +SL+ MY+ L +F+ ++ V W ++ +Q+ P + L L + M +
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV 466
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
+ P+ +++ ++L C + L +G Q+H +S K L + + N LIDMY+KCGSL
Sbjct: 467 SE-CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
A R+FD++ RD ++WS++I Y G GEEA++ +++M GI+P+ +T V VL+AC
Sbjct: 526 QARRIFDSMDN-RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
S GLV+EG+ +Y ++ T + + PT E C+CVVD+L R+G+L++A FI M L+P V
Sbjct: 585 SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVV 644
Query: 515 WGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKE 574
W +LL+A GN A +L+++P N + ++ L + +AS W+ +R+ MK+
Sbjct: 645 WKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKK 704
Query: 575 RGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDGC 623
+KK+PG SWI I H F D HP IY +L ++ + M D C
Sbjct: 705 HDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDEC 753
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 14/380 (3%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N +++MY +CG DA +VFD MP+RN+ S+ +I+G++ G G + + +M
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ-----GAEAIRLYLKML 160
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
E D F S++ C + G++LH ++K L+ S + ++LI MY R
Sbjct: 161 QEDLVPDQFAFGSIIKA-CASSSDVGLGKQLHAQVIK----LESSSHLIAQNALIAMYVR 215
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
++ + RVF + ++L W+++I G+ Q G +AL L+EM PN+ S
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
L AC+ L G QIH K EL G+ +L DMY++CG L+ A RVFD +
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER-P 334
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
D +W+ +I+ +G +EAV + +M G PD I++ S+L A +K + +GM I+
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
S I ++ + +C ++ M L + + W ++LTA + H
Sbjct: 395 -SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Query: 528 SMTRDLAYRCLL--ELEPEN 545
+ ++ +L E EP++
Sbjct: 454 PVEMLRLFKLMLVSECEPDH 473
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 224/465 (48%), Gaps = 19/465 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ H IL + + L ++S Y G L +R VF + +N+ + S+I GY +N
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQN 146
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ A+ L+ +M + ++PD + +I K D+ GK + +
Sbjct: 147 GQGAEAIRLYLKMLQED----LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSH 202
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG-NFASTSGGDLWCF 222
N+++AMY R + DA +VF +P +++ S++ +I+G++ LG F + S
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS------H 256
Query: 223 FRRMQCEG-YNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
+ M G ++ + + S L C + DYG ++H +K+ ++ + G SL
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKA-CSSLLRPDYGSQIHGLCIKS----ELAGNAIAGCSL 311
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
DMY+R L +RRVFDQ++ + W +I G NG ++A+ + +M+ G P+
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR-SSGFIPD 370
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+SL S+L A L G QIH++ K D ++ N+L+ MY+ C L +F+
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ D+++W+++++A H + E + ++ ML +PD IT+ ++L C + +
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
G ++ + + + P I ++DM + G L QA M
Sbjct: 491 LGSQVHCYSL-KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 9/286 (3%)
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
L C + GR++H +++ + D L + ++ MY + L +R VFD M
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKY----DTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
RNL +T++I GY QNG +A+ L +M +++ + P++ + S++ ACA + +G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
KQ+HA K+E + NALI MY + + ASRVF + +D I+WSS+I+ +
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSIIAGFSQ 246
Query: 422 HGRGEEAVVTYQKMLQLGI-KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTV 480
G EA+ ++ML G+ P+ S L ACS D G I+ I +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 481 EICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
C+ + DM R G L+ A + P + W ++ +G
Sbjct: 307 AGCS-LCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 7/240 (2%)
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
IN ++ +AL Q + + IS++ AC+ L G++IH
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
DT L N ++ MY KCGSL A VFD + R+ ++++S+I+ Y +G+G EA+ Y
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA--CVVDML 490
KMLQ + PD S++ AC+ S V G ++ +I +++ + + A ++ M
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI---KLESSSHLIAQNALIAMY 213
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYI 550
R Q+ A G+P+ S W S++ G + +L +P+ YI
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLIS-WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
LL+ V+ + +L Q H L G A F+ L+ YA G L +R +F S++ ++
Sbjct: 479 LLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRD 538
Query: 90 VYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG- 148
V W++LI GY ++ AL+LF+EM +S G + P+ T + + + G
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEM-KSAG---IEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP-QRNVGSFNVMISGWAS 207
KL + V+ + +R G +A + DEM + +V + ++S +
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 208 LGN 210
GN
Sbjct: 655 QGN 657
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 262/460 (56%), Gaps = 16/460 (3%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
A ++ MYS G A KVFD+ +R + +N + G+ G ++ + +M
Sbjct: 115 ATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH-----GEEVLGLYWKM 169
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDY---GRELHCYLVKNGLDLKMGSDVHLGSSLID 283
G +D FT +L C ++ G+E+H +L + G S V++ ++L+D
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS----SHVYIMTTLVD 225
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREM--QMKDGMRPN 341
MY+R + + VF M RN+ W+AMI Y +NG +AL REM + KD PN
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS-SPN 284
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
V+++SVL ACA L L GK IH + + L+ + +AL+ MY +CG L+ RVFD
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ + RD ++W+S+IS+YG+HG G++A+ +++ML G P +T VSVL ACS GLV+
Sbjct: 345 RM-HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
EG ++ ++ + +KP +E AC+VD+LGR+ +LD+A + ++ M +PGP VWGSLL +
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+HGN + A R L LEP+N NY+ L++ YA + WD V V+ +++ RGL+K+P
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
G W+ + +SF D+ +P I+ L L M +
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 195/420 (46%), Gaps = 21/420 (5%)
Query: 29 ELLQLTVDHRAHRLTQ-QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEA 87
ELL L HR+ + H IL NG Q+PFL T+L+ Y+ G ++ +R VF
Sbjct: 81 ELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK 140
Query: 88 KNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVY 147
+ +Y+WN+L L L+ +M R Y L + L+
Sbjct: 141 RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMK 200
Query: 148 GKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWAS 207
GK I +++ MY+R G A VF MP RNV S++ MI+ +A
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 208 LGN-FASTSGGDLWCFFRRMQCEGYNA--DAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
G F + FR M E ++ ++ T+ S+L C + G+ +H Y+++
Sbjct: 261 NGKAFEALRT------FREMMRETKDSSPNSVTMVSVLQA-CASLAALEQGKLIHGYILR 313
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPED 324
GLD S + + S+L+ MY R KL + +RVFD+M R++ W ++I+ Y +G +
Sbjct: 314 RGLD----SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK 369
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFN 381
A+ + EM + +G P V+ +SVL AC+ G + GK++ F T +G +
Sbjct: 370 AIQIFEEM-LANGASPTPVTFVSVLGACSHEGLVEEGKRL--FETMWRDHGIKPQIEHYA 426
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
++D+ + LD A+++ ++ W S++ + +HG E A +++ L K
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 26/303 (8%)
Query: 328 LLREMQMKDGMR-------PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
L +E ++K +R P++ + ++ C L ++H + D L
Sbjct: 56 LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLA 115
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
LI MYS GS+DYA +VFD R W+++ A L G GEE + Y KM ++G+
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRK-RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGV 174
Query: 441 KPDMITVVSVLSACSKSGL----VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+ D T VL AC S + +G I+ L TR V I +VDM R G +
Sbjct: 175 ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL-TRRGYSSHVYIMTTLVDMYARFGCV 233
Query: 497 DQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTY 556
D A GMP+ S W +++ +G + +R ++ ++ N +++ +
Sbjct: 234 DYASYVFGGMPVRNVVS-WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 557 ---ASYKRWDVVTEVRTMMKERGLKKV-PGIS-WITISGNTHSFAVGDKAHPSSSLIYDM 611
AS + + + RGL + P IS +T+ G VG + ++D
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR-------VFDR 345
Query: 612 LDD 614
+ D
Sbjct: 346 MHD 348
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 312/582 (53%), Gaps = 17/582 (2%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L + H ++ +G+ + + + LV YA S VF + ++V WN++I+ +
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
++ E AL LF M S G + P+ +L L L GK I K
Sbjct: 185 QSGEAEKALELFGRM-ESSGFE---PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
++++ MY +C A +VF +MP++++ ++N MI G+ + G+ S
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE----- 295
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
RM EG T+ S+L + C ++ +G+ +H Y++++ ++ +D+++ SL
Sbjct: 296 ILNRMIIEGTRPSQTTLTSIL-MACSRSRNLLHGKFIHGYVIRSVVN----ADIYVNCSL 350
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
ID+Y + + L+ VF + + W MI+ Y+ G A+ + +M + G++P+
Sbjct: 351 IDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKPD 409
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
V+ SVLPAC+ L L GKQIH ++ L D L +AL+DMYSKCG+ A R+F+
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
++ +D ++W+ MISAYG HG+ EA+ + +M + G+KPD +T+++VLSAC +GL+D
Sbjct: 470 SIPK-KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP-LDPGPSVWGSLLT 520
EG+ ++ + ++Y ++P +E +C++D+LGR+G+L +A E I+ P + +L +
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
A +H D R L+E P++ S Y+ L N YAS + WD VR MKE GL+K
Sbjct: 589 ACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK 648
Query: 581 PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDG 622
PG SWI +S F D++H + +Y+ L L M G
Sbjct: 649 PGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHMESG 690
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/505 (30%), Positives = 266/505 (52%), Gaps = 21/505 (4%)
Query: 26 NLLELL-QLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHS 84
LL LL + T ++ R + H +ILT G ++ L L++ Y T D +R VF +
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN 64
Query: 85 IEAK-NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQ 143
+ + +VY+WNSL++GY KN F L +F+ + + CV PD +T + K G L
Sbjct: 65 FDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRL--LNCSICV-PDSFTFPNVIKAYGALG 121
Query: 144 DLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
G++I A+S++ MY++ F ++++VFDEMP+R+V S+N +IS
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
+ + S F RM+ G+ ++ ++ + C + + G+E+H V
Sbjct: 182 CF-----YQSGEAEKALELFGRMESSGFEPNSVSLTVAISA-CSRLLWLERGKEIHRKCV 235
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
K G +L D ++ S+L+DMY + L ++R VF +M ++L W +MI GYV G +
Sbjct: 236 KKGFEL----DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK 291
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
+ +L M + +G RP++ +L S+L AC+ L+ GK IH + + +N D + +L
Sbjct: 292 SCVEILNRMII-EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSL 350
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRD-AITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
ID+Y KCG + A VF +D A +W+ MIS+Y G +AV Y +M+ +G+KP
Sbjct: 351 IDLYFKCGEANLAETVFSKTQ--KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF 502
D++T SVL ACS+ +++G I+ S I+ +++ + + ++DM + G +A
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 503 IKGMPLDPGPSVWGSLLTASVMHGN 527
+P S W +++A HG
Sbjct: 468 FNSIPKKDVVS-WTVMISAYGSHGQ 491
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
SLL C T + +H + L L + DV L SLI++Y K +R VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVH----QRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 300 QMKSR-NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGL 358
R ++Y+W ++++GY +N D L + + + P+ + +V+ A LG
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 359 IVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
+G+ IH K D + ++L+ MY+K + + +VFD + RD +W+++IS
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE-RDVASWNTVISC 182
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR-YQMK 477
+ G E+A+ + +M G +P+ +++ +SACS+ ++ G I+ + + +++
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 478 PTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
V + +VDM G+ L+ A E + MP W S++ V G+S
Sbjct: 243 EYVN--SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDS 290
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 314/586 (53%), Gaps = 22/586 (3%)
Query: 24 PHNLLELLQLTVDHRAHRLTQ-QC-HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
P LLE+L ++ +TQ QC H + GF + + +++ Y + ++ +
Sbjct: 147 PVTLLEMLSGVLE-----ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL 201
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
F +E +++ WN++I+GY L L M GD + PD T VSG
Sbjct: 202 FDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR----GDGLRPDQQTFGASLSVSGT 257
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
+ DL G+++ + +++ MY +CG+ + +V + +P ++V + VM
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 202 ISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY 261
ISG LG F M G + + IAS++ C + G +D G +H Y
Sbjct: 318 ISGLMRLGRAEKA-----LIVFSEMLQSGSDLSSEAIASVVA-SCAQLGSFDLGASVHGY 371
Query: 262 LVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGA 321
++++G L D +SLI MY++ L S +F++M R+L W A+I+GY QN
Sbjct: 372 VLRHGYTL----DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVD 427
Query: 322 PEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN 381
AL+L EM+ K + + +++S+L AC+ G L VGK IH + + + +
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDT 487
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
AL+DMYSKCG L+ A R FD++S+ +D ++W +I+ YG HG+G+ A+ Y + L G++
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISW-KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME 546
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
P+ + ++VLS+CS +G+V +G+ I++S++ + ++P E ACVVD+L R+ +++ A +
Sbjct: 547 PNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFK 606
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKR 561
F K P V G +L A +G + D+ ++EL+P + +Y+ L +++A+ KR
Sbjct: 607 FYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKR 666
Query: 562 WDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSL 607
WD V+E M+ GLKK+PG S I ++G T +F + +H ++
Sbjct: 667 WDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTV 712
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 253/482 (52%), Gaps = 22/482 (4%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H Q+L NGF+ + ++++ LV+ YA G L +R VF + ++V W ++I Y +
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
G A L EM R G + P TL + +SG L+ + + + +
Sbjct: 129 GEACSLVNEM-RFQG---IKPGPVTL--LEMLSGVLE-ITQLQCLHDFAVIYGFDCDIAV 181
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
NS++ +Y +C GDA +FD+M QR++ S+N MISG+AS+GN + ++ RM
Sbjct: 182 MNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMS-----EILKLLYRM 236
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ +G D T + L V G + GR LHC +VK G D+ D+HL ++LI MY
Sbjct: 237 RGDGLRPDQQTFGASLSV-SGTMCDLEMGRMLHCQIVKTGFDV----DMHLKTALITMYL 291
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ K S RV + + ++++ WT MI+G ++ G E ALI+ EM ++ G + ++
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM-LQSGSDLSSEAIA 350
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
SV+ +CA LG +G +H + + DT N+LI MY+KCG LD + +F+ ++
Sbjct: 351 SVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE- 409
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKM-LQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
RD ++W+++IS Y + +A++ +++M + + D TVVS+L ACS +G + G
Sbjct: 410 RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKL 469
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
I+ ++ R ++P + +VDM + G L+ A + S WG L+ H
Sbjct: 470 IH-CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFH 527
Query: 526 GN 527
G
Sbjct: 528 GK 529
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 143/286 (50%), Gaps = 13/286 (4%)
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F M D FT SLL C + +G +H ++ NG SD ++ SSL+
Sbjct: 34 FSSMLANKLLPDTFTFPSLLKAC-ASLQRLSFGLSIHQQVLVNGF----SSDFYISSSLV 88
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
++Y++ L +R+VF++M+ R++ WTAMI Y + G +A L+ EM+ + G++P
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ-GIKPGP 147
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
V+L+ +L + L + +H F+ + D ++ N+++++Y KC + A +FD
Sbjct: 148 VTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ RD ++W++MIS Y G E + +M G++PD T + LS + D
Sbjct: 205 MEQ-RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV--SGTMCDL 261
Query: 463 GMG-IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP 507
MG + + I + + + ++ M + G+ + + ++ +P
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
+ + IN +G + L M + + + P+ + S+L ACA L L G IH
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSM-LANKLLPDTFTFPSLLKACASLQRLSFGLSIH--- 69
Query: 369 TKVELNGDTSLF---NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRG 425
+V +NG +S F ++L+++Y+K G L +A +VF+ + RD + W++MI Y G
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE-RDVVHWTAMIGCYSRAGIV 128
Query: 426 EEAVVTYQKMLQLGIKPDMITVVSVLSA 453
EA +M GIKP +T++ +LS
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSG 156
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 266/449 (59%), Gaps = 12/449 (2%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N ++ YS+CG A +VFD M +R++ S+N MI + N + D+ F M+
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR--NRMESEALDI---FLEMR 154
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
EG+ FTI+S+L C G ++LHC VK +DL ++++G++L+D+Y++
Sbjct: 155 NEGFKFSEFTISSVLSAC-GVNCDALECKKLHCLSVKTCIDL----NLYVGTALLDLYAK 209
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ + +VF+ M+ ++ W++M+ GYVQN E+AL+L R Q + + N+ +L S
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ-RMSLEQNQFTLSS 268
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
V+ AC+ L LI GKQ+HA K + + ++ +DMY+KCGSL + +F V +
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE-K 327
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
+ W+++IS + H R +E ++ ++KM Q G+ P+ +T S+LS C +GLV+EG +
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
+ T Y + P V +C+VD+LGR+G L +A E IK +P DP S+WGSLL + ++ N
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447
Query: 528 SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
++A L ELEPEN N++ LSN YA+ K+W+ + + R ++++ +KKV G SWI
Sbjct: 448 LELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWID 507
Query: 588 ISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
I H+F+VG+ HP I LD+LV
Sbjct: 508 IKDKVHTFSVGESGHPRIREICSTLDNLV 536
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 210/411 (51%), Gaps = 16/411 (3%)
Query: 29 ELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
E+LQL + A + CH +I+ + L L++AY+ G + ++R VF + +
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
++ WN++I Y +NR AL +F EM R+ G ++T++++ G D +
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEM-RNEGFK---FSEFTISSVLSACGVNCDALEC 181
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASL 208
K + S +++ +Y++CG DA++VF+ M ++ +++ M++G+
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 209 GNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD 268
N+ + +RR Q + FT++S++ C + G+++H + K+G
Sbjct: 242 KNYE-----EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE-GKQMHAVICKSGF- 294
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALIL 328
GS+V + SS +DMY++ L S +F +++ +NL +W +I+G+ ++ P++ +IL
Sbjct: 295 ---GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 329 LREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF-STKVELNGDTSLFNALIDMY 387
+MQ +DGM PN+V+ S+L C G + G++ T L+ + ++ ++D+
Sbjct: 352 FEKMQ-QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ G L A + ++ + A W S++++ ++ E A V +K+ +L
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 3/189 (1%)
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
+L CA G ++ K H +++L GD +L N LI+ YSKCG ++ A +VFD + R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LER 125
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
++W++MI Y + EA+ + +M G K T+ SVLSAC + E ++
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
L + + + + ++D+ + G + A++ + M D W S++ V + N
Sbjct: 186 -CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKN 243
Query: 528 SMTRDLAYR 536
L YR
Sbjct: 244 YEEALLLYR 252
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 291/557 (52%), Gaps = 25/557 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q AQ+L + + FL + V GD N S +F E N Y +N +I G
Sbjct: 54 RQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 109
Query: 104 -REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+ AL L+R M S + PD +T + +L+++ G+ +
Sbjct: 110 WNDHEAALSLYRRMKFS----GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER 165
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
+S++ MY++CG+ G A K+FDE+ +R+ S+N MISG++ G D
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG-----YAKDAMDL 220
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
FR+M+ EG+ D T+ S+L C G GR L + + K+G LGS LI
Sbjct: 221 FRKMEEEGFEPDERTLVSMLGAC-SHLGDLRTGR----LLEEMAITKKIGLSTFLGSKLI 275
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
MY + L +RRVF+QM ++ WTAMI Y QNG +A L EM+ K G+ P+
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KTGVSPDA 334
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+L +VL AC +G L +GKQI ++++ L + + L+DMY KCG ++ A RVF+
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ +A TW++MI+AY G +EA++ + +M + P IT + VLSAC +GLV +
Sbjct: 395 MPVKNEA-TWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQ 450
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G ++ + + + + P +E ++D+L R+G LD+A EF++ P P + ++L A
Sbjct: 451 GCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGAC 510
Query: 523 VMHGNSMTRDLAYRCLLEL-EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+ R+ A R L+E+ E +N NY+ SN A K WD ++R +M++RG+ K P
Sbjct: 511 HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTP 570
Query: 582 GISWITISGNTHSFAVG 598
G SWI I G F G
Sbjct: 571 GCSWIEIEGELMEFLAG 587
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 310/578 (53%), Gaps = 19/578 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ H ++ G+ + + L++ Y GD+ +RL+F + +++ WN++I+GY +N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
L LF M G V PD TL ++ L D G+ I
Sbjct: 276 GMCHEGLELFFAMR----GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
NS+ MY G + +A K+F M ++++ S+ MISG+ NF D +
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY--NFLPDKAIDT---Y 386
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
R M + D T+A++L C G D G ELH K + ++ S V + ++LI+
Sbjct: 387 RMMDQDSVKPDEITVAAVLSAC-ATLGDLDTGVELH----KLAIKARLISYVIVANNLIN 441
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
MYS+ K + + +F + +N+ WT++I G N +ALI LR+M+M ++PN +
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAI 499
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+L + L ACA +G L+ GK+IHA + + D L NAL+DMY +CG ++ A F+
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-- 557
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
S +D +W+ +++ Y G+G V + +M++ ++PD IT +S+L CSKS +V +G
Sbjct: 558 SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
+ +Y S + Y + P ++ ACVVD+LGR+G+L +A +FI+ MP+ P P+VWG+LL A
Sbjct: 618 L-MYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACR 676
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
+H +L+ + + EL+ ++ YI L N YA +W V +VR MMKE GL G
Sbjct: 677 IHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGC 736
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
SW+ + G H+F DK HP + I +L+ M++
Sbjct: 737 SWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 261/527 (49%), Gaps = 20/527 (3%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
+ L++L RA + ++ L++ + L ++ + G+L + VF +
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
+N++ WN L+ GY K F A+ L+ M G V PD YT + + G + DL
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG---VKPDVYTFPCVLRTCGGIPDLA 213
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
GK + N+++ MY +CG+ A +FD MP+R++ S+N MISG+
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY- 272
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
N G +L F M+ + D T+ S++ C G GR++H Y++ G
Sbjct: 273 -FENGMCHEGLEL---FFAMRGLSVDPDLMTLTSVISA-CELLGDRRLGRDIHAYVITTG 327
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
+ D+ + +SL MY + + ++F +M+ +++ WT MI+GY N P+ A+
Sbjct: 328 FAV----DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
R M +D ++P+++++ +VL ACA LG L G ++H + K L + N LI+M
Sbjct: 384 DTYRMMD-QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
YSKC +D A +F N+ ++ I+W+S+I+ L+ R EA++ ++M ++ ++P+ IT
Sbjct: 443 YSKCKCIDKALDIFHNIPR-KNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAIT 500
Query: 447 VVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
+ + L+AC++ G + G I+ ++ R + + ++DM R G+++ A
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVL-RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 507 PLDPGPSVWGSLLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISL 552
D + W LLT G SM +L R + + +ISL
Sbjct: 560 KKD--VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 189/404 (46%), Gaps = 23/404 (5%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
RL + HA ++T GFA + + L Y +G + +F +E K++ W ++I+GY
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
N A+ +R M + D V PD+ T+A + L DL G + +
Sbjct: 374 EYNFLPDKAIDTYRMMDQ----DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
AN+++ MYS+C A+ +F +P++NV S+ +I+G L N +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-LRLNNRCFEA----L 484
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F R+M+ A+L + G G+E+H ++++ G+ G D L ++
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAAC--ARIGALMCGKEIHAHVLRTGV----GLDDFLPNA 538
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
L+DMY R ++ + F+ K +++ W ++ GY + G + L M +K +RP
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRM-VKSRVRP 596
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT---SLFNALIDMYSKCGSLDYAS 397
++++ IS+L C+ +V + + FS K+E G T + ++D+ + G L A
Sbjct: 597 DEITFISLLCGCS--KSQMVRQGLMYFS-KMEDYGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
+ + D W ++++A +H + + ++ Q + +L K
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 148/339 (43%), Gaps = 52/339 (15%)
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
++G NG E+A+ LL MQ + + ++ ++++ C G ++++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
+ L NA + M+ + G+L A VF +S R+ +W+ ++ Y G +EA+ Y
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 433 QKMLQL-GIKPDMITVVSVLSACSKSGLVDEGMG-----------------IYNSLITRY 474
+ML + G+KPD+ T VL C G+ D G + N+LIT Y
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 475 QMKPTVEICACVVDMLGR---------------SGQLDQALEF---IKGMPLDPGPSVWG 516
V+ + D + R +G + LE ++G+ +DP
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 517 SLLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKER 575
S+++A + G+ + RD+ + + S SL+ Y + W ++ + M+ +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 576 GLKKVPGISWIT-ISGNTHSFAVGDKAHPSSSLIYDMLD 613
+ +SW T ISG ++F + DKA + Y M+D
Sbjct: 362 DI-----VSWTTMISGYEYNF-LPDKAIDT----YRMMD 390
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 284/539 (52%), Gaps = 44/539 (8%)
Query: 109 ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN 168
A +LF + R GG D ++ I K ++ L G + G +
Sbjct: 94 ATILFYQRIRHVGGRL---DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVET 150
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQC 228
M MY+ CG A VFDEM R+V ++N MI + G + + F M+
Sbjct: 151 GFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV-----DEAFKLFEEMKD 205
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
D + +++ C G+TG Y R ++ +L++N D++M D HL ++L+ MY+ +
Sbjct: 206 SNVMPDEMILCNIVSAC-GRTGNMRYNRAIYEFLIEN--DVRM--DTHLLTALVTMYAGA 260
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD------------ 336
+ ++R F +M RNL+V TAM++GY + G +DA ++ + + KD
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 337 ------------------GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTS 378
G++P+ VS+ SV+ ACA LG L K +H+ L + S
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ NALI+MY+KCG LD VF+ + R+ ++WSSMI+A +HG +A+ + +M Q
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPR-RNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQ 498
++P+ +T V VL CS SGLV+EG I+ S+ Y + P +E C+VD+ GR+ L +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLRE 499
Query: 499 ALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYAS 558
ALE I+ MP+ +WGSL++A +HG A + +LELEP++ + +SN YA
Sbjct: 500 ALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAR 559
Query: 559 YKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVA 617
+RW+ V +R +M+E+ + K G+S I +G +H F +GDK H S+ IY LD++V+
Sbjct: 560 EQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 261/454 (57%), Gaps = 13/454 (2%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
+N ++ Y R G+ +A KVFDEMP R + ++N MI+G L F G FR M
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG---LIQFEFNEEG--LSLFREM 82
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
G++ D +T+ S+ G G+++H Y +K GL+L D+ + SSL MY
Sbjct: 83 HGLGFSPDEYTLGSVFSGSAG-LRSVSIGQQIHGYTIKYGLEL----DLVVNSSLAHMYM 137
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
R+ KL V M RNL W +I G QNG PE L L + M++ G RPNK++ +
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKI-SGCRPNKITFV 196
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
+VL +C+ L G+QIHA + K+ + ++ ++LI MYSKCG L A++ F
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED- 255
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKML-QLGIKPDMITVVSVLSACSKSGLVDEGMG 465
D + WSSMISAYG HG+G+EA+ + M Q ++ + + +++L ACS SGL D+G+
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 315
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
+++ ++ +Y KP ++ CVVD+LGR+G LDQA I+ MP+ +W +LL+A +H
Sbjct: 316 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 375
Query: 526 GNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
N+ ++ +L+++P + + Y+ L+N +AS KRW V+EVR M+++ +KK GISW
Sbjct: 376 KNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Query: 586 ITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
G H F +GD++ S IY L +L M
Sbjct: 436 FEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 469
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 181/385 (47%), Gaps = 19/385 (4%)
Query: 57 QNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM 116
+N + L++ Y +GDL +R VF + + + WN++I G ++ L LFREM
Sbjct: 23 KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM 82
Query: 117 GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
HG PD+YTL ++ S L+ + G+ I G + +S+ MY R
Sbjct: 83 ---HGLG-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 177 CGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAF 236
G+ D V MP RN+ ++N +I +GN + + ++ M+ G +
Sbjct: 139 NGKLQDGEIVIRSMPVRNLVAWNTLI-----MGNAQNGCPETVLYLYKMMKISGCRPNKI 193
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
T ++L C + G+++H +K G + SSLI MYS+ L + +
Sbjct: 194 TFVTVLSSCSDLAIRGQ-GQQIHAEAIKIGASSVVAVV----SSLISMYSKCGCLGDAAK 248
Query: 297 VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLG 356
F + + + +W++MI+ Y +G ++A+ L M + M N+V+ +++L AC+ G
Sbjct: 249 AFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 308
Query: 357 GLIVGKQIHAFSTKVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
+ K + F VE G + ++D+ + G LD A + ++ D + W
Sbjct: 309 --LKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWK 366
Query: 414 SMISAYGLHGRGEEAVVTYQKMLQL 438
+++SA +H E A ++++LQ+
Sbjct: 367 TLLSACNIHKNAEMAQRVFKEILQI 391
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 252/436 (57%), Gaps = 14/436 (3%)
Query: 170 VMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
++ Y +C DA KV DEMP++NV S+ MIS ++ G+ S L F M+ +
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGH----SSEALTVFAEMMRSD 148
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSK 289
G + FT A++L C +G G+++H +VK D S + +GSSL+DMY+++
Sbjct: 149 G-KPNEFTFATVLTSCIRASG-LGLGKQIHGLIVKWNYD----SHIFVGSSLLDMYAKAG 202
Query: 290 KLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVL 349
++ +R +F+ + R++ TA+I GY Q G E+AL + + +GM PN V+ S+L
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH-SEGMSPNYVTYASLL 261
Query: 350 PACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDA 409
A + L L GKQ H + EL L N+LIDMYSKCG+L YA R+FDN+ R A
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE-RTA 320
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKML-QLGIKPDMITVVSVLSACSKSGLVDEGMGIYN 468
I+W++M+ Y HG G E + ++ M + +KPD +T+++VLS CS + D G+ I++
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFD 380
Query: 469 SLIT-RYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
++ Y KP E C+VDMLGR+G++D+A EFIK MP P V GSLL A +H +
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLS 440
Query: 528 SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
+ R L+E+EPEN NY+ LSN YAS RW V VR MM ++ + K PG SWI
Sbjct: 441 VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Query: 588 ISGNTHSFAVGDKAHP 603
H F D+ HP
Sbjct: 501 HEQTLHYFHANDRTHP 516
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 192/408 (47%), Gaps = 32/408 (7%)
Query: 25 HNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHS 84
H LL +D RA R Q+ HA ++ + +L TRL+ Y L +R V
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 85 IEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD 144
+ KNV W ++I+ Y + AL +F EM RS G P+++T AT+
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK----PNEFTFATVLTSCIRASG 168
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
L GK I G +S++ MY++ G+ +A ++F+ +P+R+V S +I+G
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
+A LG + F R+ EG + + T ASLL G D+G++ HC++++
Sbjct: 229 YAQLG-----LDEEALEMFHRLHSEGMSPNYVTYASLLTALSG-LALLDHGKQAHCHVLR 282
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPED 324
L L +SLIDMYS+ L +RR+FD M R W AM+ GY ++G +
Sbjct: 283 RELPFY----AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACA----------LLGGLIVGKQIHAFSTKVELN 374
L L R M+ + ++P+ V+L++VL C+ + G++ G+ + TK
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE----YGTK---- 390
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
T + ++DM + G +D A + A S++ A +H
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 309/582 (53%), Gaps = 28/582 (4%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H ++ NG + ++ L++ Y G++ +R++F E K+V WNS+I+GY N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
AL +F M ++ V + + A++ K+ L++L + + +
Sbjct: 275 LDLEALGMFYSMRLNY----VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMP-QRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
++M YS+C DA+++F E+ NV S+ MISG+ L N DL F
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF--LQNDGKEEAVDL---F 385
Query: 224 RRMQCEGYNADAFT---IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
M+ +G + FT I + LPV E+H +VK + +G++
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVISPS--------EVHAQVVKTNYE----RSSTVGTA 433
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
L+D Y + K+ + +VF + +++ W+AM+ GY Q G E A+ + E+ K G++P
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKP 492
Query: 341 NKVSLISVLPACALLGGLI-VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
N+ + S+L CA + GKQ H F+ K L+ + +AL+ MY+K G+++ A V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F +D ++W+SMIS Y HG+ +A+ +++M + +K D +T + V +AC+ +GL
Sbjct: 553 FKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
V+EG ++ ++ ++ PT E +C+VD+ R+GQL++A++ I+ MP G ++W ++L
Sbjct: 612 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 671
Query: 520 TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
A +H + LA ++ ++PE+ + Y+ LSN YA W +VR +M ER +KK
Sbjct: 672 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 731
Query: 580 VPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
PG SWI + T+SF GD++HP IY L+DL + D
Sbjct: 732 EPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 234/490 (47%), Gaps = 28/490 (5%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H Q + GF + + T LV Y + R VF ++ +NV W +LI+GY +N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
L LF M + P+ +T A V E G +
Sbjct: 173 SMNDEVLTLFMRM----QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF- 222
+NS++ +Y +CG A +FD+ ++V ++N MISG+A+ +G DL
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA-------NGLDLEALG 281
Query: 223 -FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F M+ + AS++ + C + + +LHC +VK G D ++ ++L
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKL-CANLKELRFTEQLHCSVVKYGFLF----DQNIRTAL 336
Query: 282 IDMYSRSKKLVLSRRVFDQMKS-RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
+ YS+ ++ + R+F ++ N+ WTAMI+G++QN E+A+ L EM+ K G+RP
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK-GVRP 395
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
N+ + +L A +I ++HA K +++ AL+D Y K G ++ A++VF
Sbjct: 396 NEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
+ +D + WS+M++ Y G E A+ + ++ + GIKP+ T S+L+ C+ +
Sbjct: 452 SGIDD-KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN-A 509
Query: 461 DEGMGI-YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
G G ++ + ++ ++ + + ++ M + G ++ A E K + W S++
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK-RQREKDLVSWNSMI 568
Query: 520 TASVMHGNSM 529
+ HG +M
Sbjct: 569 SGYAQHGQAM 578
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 203/424 (47%), Gaps = 22/424 (5%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
++ + +++L + + R T+Q H ++ GF + + T L+ AY+ + + +
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 82 FHSIE-AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSG 140
F I NV W ++I+G+++N A+ LF EM R V P+++T + I
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG----VRPNEFTYSVILTA-- 406
Query: 141 ELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNV 200
++ + + +++ Y + G+ +A KVF + +++ +++
Sbjct: 407 --LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 201 MISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHC 260
M++G+A G + F + G + FT +S+L VC G++ H
Sbjct: 465 MLAGYAQTGETEAAIK-----MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 261 YLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG 320
+ +K+ LD S + + S+L+ MY++ + + VF + + ++L W +MI+GY Q+G
Sbjct: 520 FAIKSRLD----SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
AL + +EM+ K ++ + V+ I V AC G + G++ + T
Sbjct: 576 QAMKALDVFKEMK-KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 381 NA-LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
N+ ++D+YS+ G L+ A +V +N+ + W ++++A +H + E + +K+ +
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI--IA 692
Query: 440 IKPD 443
+KP+
Sbjct: 693 MKPE 696
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 14/275 (5%)
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASL 241
+A +FD+ P R+ S+ ++ G++ G + L+ R+ G D +S+
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGR--TQEAKRLFLNIHRL---GMEMDCSIFSSV 99
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNG-LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
L V + +GR+LHC +K G LD DV +G+SL+D Y + R+VFD+
Sbjct: 100 LKVSATLCDEL-FGRQLHCQCIKFGFLD-----DVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
MK RN+ WT +I+GY +N ++ L L MQ +G +PN + + L A G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
G Q+H K L+ + N+LI++Y KCG++ A +FD + +TW+SMIS Y
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE-VKSVVTWNSMISGYA 271
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
+G EA+ + M ++ + SV+ C+
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 297/545 (54%), Gaps = 24/545 (4%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHS---IEAKNVYLWNSLINGYV 101
Q HA + +GF + + L+S Y+ SGD+++S VF I+ +N+ N +I +
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
++++ G A+ LF M + + + D++++ ++ V L L GK + G +
Sbjct: 430 QSKKPGKAIRLFTRMLQ----EGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLV 482
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
+S+ +YS+CG ++ K+F +P ++ + MISG+ G G
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG----- 537
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F M +G + D T+A++L VC G+E+H Y ++ G+D M LGS+L
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPS-LPRGKEIHGYTLRAGIDKGM----DLGSAL 592
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
++MYS+ L L+R+V+D++ + +++I+GY Q+G +D +L R+M M G +
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMD 651
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
++ S+L A AL +G Q+HA+ TK+ L + S+ ++L+ MYSK GS+D + F
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
++ D I W+++I++Y HG+ EA+ Y M + G KPD +T V VLSACS GLV+
Sbjct: 712 QING-PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
E NS++ Y ++P C+VD LGRSG+L +A FI M + P VWG+LL A
Sbjct: 771 ESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+HG +A + +ELEP + YISLSN A WD V E R +MK G++K P
Sbjct: 831 CKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEP 890
Query: 582 GISWI 586
G S +
Sbjct: 891 GWSSV 895
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 245/494 (49%), Gaps = 33/494 (6%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
R + A+++ G A++ F+ T +V YA G + + VF I +V W +++GY
Sbjct: 268 RFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
K+ + AL +F+EM H G V ++ T+ ++ G + +
Sbjct: 327 TKSNDAFSALEIFKEM--RHSG--VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVF---DEMPQRNVGSFNVMISGWASLGNFASTSGG 217
A ++++MYS+ G+ + +VF D++ ++N+ NVMI+ ++ S G
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI--VNVMITSFSQ-----SKKPG 435
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
F RM EG D F++ SLL V + G+++H Y +K+GL L D+ +
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSV----LDCLNLGKQVHGYTLKSGLVL----DLTV 487
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
GSSL +YS+ L S ++F + ++ W +MI+G+ + G +A+ L EM + DG
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM-LDDG 546
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
P++ +L +VL C+ L GK+IH ++ + ++ L +AL++MYSKCGSL A
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+V+D + D ++ SS+IS Y HG ++ + ++ M+ G D + S+L A + S
Sbjct: 607 QVYDRLPEL-DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD---QALEFIKGMPLDPGPSV 514
G ++ + IT+ + + + ++ M + G +D +A I G P
Sbjct: 666 DESSLGAQVH-AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING----PDLIA 720
Query: 515 WGSLLTASVMHGNS 528
W +L+ + HG +
Sbjct: 721 WTALIASYAQHGKA 734
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 232/470 (49%), Gaps = 27/470 (5%)
Query: 60 FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRS 119
FLT L+S Y+ SG + + +F +I +V N +I+GY ++R F +L F +M
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM-HF 143
Query: 120 HGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE 179
G + ++ + ++ LQ ++ +L+ + ++++ ++S+
Sbjct: 144 LGFE---ANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN-ADAFTI 238
F DA KVF + NV +N +I+G N+ G ++ F M C G+ D++T
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNY-----GAVFDLFHEM-CVGFQKPDSYTY 254
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
+S+L C K +G+ + ++K G + DV + ++++D+Y++ + + VF
Sbjct: 255 SSVLAAC-ASLEKLRFGKVVQARVIKCGAE-----DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 299 DQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGL 358
++ + ++ WT M++GY ++ AL + +EM+ G+ N ++ SV+ AC +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMV 367
Query: 359 IVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
Q+HA+ K D+S+ ALI MYSK G +D + +VF+++ + + MI++
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA--CSKSGLVDEGMGIYNSLITRYQM 476
+ + +A+ + +MLQ G++ D +V S+LS C G G + + L+
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVL---- 483
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ + + + + + G L+++ + +G+P + W S+++ +G
Sbjct: 484 --DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 7/248 (2%)
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ 333
DV L SL+ YS S + + ++FD + ++ MI+GY Q+ E++L +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
G N++S SV+ AC+ L + + + + K+ + +ALID++SK
Sbjct: 143 FL-GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI-KPDMITVVSVLS 452
+ A +VF + S + W+++I+ L + AV + +G KPD T SVL+
Sbjct: 202 EDAYKVFRD-SLSANVYCWNTIIAG-ALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 453 ACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
AC+ + G + +I V +C +VD+ + G + +A+E +P +P
Sbjct: 260 ACASLEKLRFGKVVQARVIK--CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSV 316
Query: 513 SVWGSLLT 520
W +L+
Sbjct: 317 VSWTVMLS 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
L +L + H + ++ H L G + L + LV+ Y+ G L ++R V+ +
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
+ +SLI+GY ++ +LFR+M S D + +++I K + +
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG----FTMDSFAISSILKAAALSDESS 669
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
G + +S++ MYS+ G D K F ++ ++ ++ +I+ +A
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVC 245
G + + M+ +G+ D T +L C
Sbjct: 730 QHGK-----ANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 286/540 (52%), Gaps = 21/540 (3%)
Query: 81 VFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSG 140
VF + NV W +I ++ A+ F +M S D +TL+++
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG----FESDKFTLSSVFSACA 280
Query: 141 ELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRC---GEFGDAMKVFDEMPQRNVGS 197
EL++L GK + S S++ MY++C G D KVFD M +V S
Sbjct: 281 ELENLSLGKQL--HSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGY-NADAFTIASLLPVCCGKTGKWDYGR 256
+ +I+G+ N A+ + F M +G+ + FT +S C G G+
Sbjct: 339 WTALITGYMKNCNLATEAIN----LFSEMITQGHVEPNHFTFSSAFKAC-GNLSDPRVGK 393
Query: 257 ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGY 316
++ K GL S+ + +S+I M+ +S ++ ++R F+ + +NL + ++G
Sbjct: 394 QVLGQAFKRGL----ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 317 VQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD 376
+N E A LL E+ ++ + + + S+L A +G + G+QIH+ K+ L+ +
Sbjct: 450 CRNLNFEQAFKLLSEITERE-LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML 436
+ NALI MYSKCGS+D ASRVF N R+ I+W+SMI+ + HG + T+ +M+
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVF-NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+ G+KP+ +T V++LSACS GLV EG +NS+ +++KP +E AC+VD+L R+G L
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 497 DQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTY 556
A EFI MP VW + L A +H N+ LA R +LEL+P P+ YI LSN Y
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIY 687
Query: 557 ASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
A +W+ TE+R MKER L K G SWI + H F VGD AHP++ IYD LD L+
Sbjct: 688 ACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLI 747
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 200/421 (47%), Gaps = 24/421 (5%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYA---TSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
L +Q H+ + +G + + LV YA G ++ R VF +E +V W +LI
Sbjct: 287 LGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 99 GYVKNREFG-HALVLFREM-GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSX 156
GY+KN A+ LF EM + H V P+ +T ++ K G L D GK + G++
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGH----VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
ANSV++M+ + DA + F+ + ++N+ S+N + G NF
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA-- 458
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
+ + AFT ASLL G G ++H +VK GL
Sbjct: 459 ---FKLLSEITERELGVSAFTFASLLS-GVANVGSIRKGEQIHSQVVKLGLSCNQP---- 510
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
+ ++LI MYS+ + + RVF+ M++RN+ WT+MI G+ ++G L +M +++
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM-IEE 569
Query: 337 GMRPNKVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
G++PN+V+ +++L AC+ +G + G + ++ ++ + ++D+ + G L
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI-KPDMITVVSVLSAC 454
A + + + D + W + + A +H E + +K+L+L +P +S + AC
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 455 S 455
+
Sbjct: 690 A 690
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 239/510 (46%), Gaps = 36/510 (7%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE--- 86
LL+ + R RL + HA+++ + L L+S Y+ SGD + VF ++
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 87 AKNVYLWNSLINGYVKN-REFG--HALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQ 143
++V W++++ Y N RE V F E+G ++P+DY + +
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG-------LVPNDYCYTAVIRACSNSD 180
Query: 144 DLVYGKLIPGKSXXXXXXXXXXXAN-SVMAMYSRCGE--FGDAMKVFDEMPQRNVGSFNV 200
+ G++ G S++ M+ + GE F +A KVFD+M + NV ++ +
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTL 239
Query: 201 MISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHC 260
MI+ +G F + FF M G+ +D FT++S+ C + G++LH
Sbjct: 240 MITRCMQMG-FPREAIR----FFLDMVLSGFESDKFTLSSVFSA-CAELENLSLGKQLHS 293
Query: 261 YLVKNGLDLKMGSDVHLGSSLIDMYSRSK---KLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+ +++GL DV SL+DMY++ + R+VFD+M+ ++ WTA+I GY+
Sbjct: 294 WAIRSGL----VDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 318 QN-GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD 376
+N +A+ L EM + + PN + S AC L VGKQ+ + K L +
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML 436
+S+ N++I M+ K ++ A R F+++S ++ +++++ + + E+A ++
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSE-KNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+ + T S+LS + G + +G I+ S + + + +C ++ M + G +
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIH-SQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 497 DQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
D A M + W S++T HG
Sbjct: 526 DTASRVFNFME-NRNVISWTSMITGFAKHG 554
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 182/387 (47%), Gaps = 24/387 (6%)
Query: 123 DCVLP-DDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
D + P D T +++ K +D GKL+ + NS++++YS+ G+
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA 114
Query: 182 DAMKVFDEMP---QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTI 238
A VF+ M +R+V S++ M++ + + G ++ F + G + +
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGR--ELDAIKVFVEFLEL---GLVPNDYCY 169
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK-LVLSRRV 297
+++ C + GR +L+K G SDV +G SLIDM+ + + + +V
Sbjct: 170 TAVIRAC-SNSDFVGVGRVTLGFLMKTG---HFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
FD+M N+ WT MI +Q G P +A+ +M + G +K +L SV ACA L
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELEN 284
Query: 358 LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKC---GSLDYASRVFDNVSYFRDAITWSS 414
L +GKQ+H+++ + L D +L+DMY+KC GS+D +VFD + ++W++
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED-HSVMSWTA 341
Query: 415 MISAYGLHGR-GEEAVVTYQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLIT 472
+I+ Y + EA+ + +M+ G ++P+ T S AC G +
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 473 RYQMKPTVEICACVVDMLGRSGQLDQA 499
R + + V+ M +S +++ A
Sbjct: 402 R-GLASNSSVANSVISMFVKSDRMEDA 427
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 331 EMQMKDGMRP-NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSK 389
++ +DG+RP + V+ S+L +C +GK +HA + ++ D+ L+N+LI +YSK
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 390 CGSLDYASRVFDNVSYF--RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITV 447
G A VF+ + F RD ++WS+M++ YG +GR +A+ + + L+LG+ P+
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 448 VSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
+V+ ACS S V G L+ + V + ++DM
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 291/544 (53%), Gaps = 22/544 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ H Q++ N LT L+ YA G++ + VF+ I +NV W S+I GYVKN
Sbjct: 162 KKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
LVLF M ++ VL ++YT T+ +L L GK G
Sbjct: 221 DLCEEGLVLFNRMRENN----VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
S++ MY +CG+ +A +VF+E ++ + MI G+ G S + F
Sbjct: 277 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG-----SVNEALSLF 331
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGS-DVHLGSSLI 282
++M+ + TIAS+L CG + GR +H GL +K+G D ++ ++L+
Sbjct: 332 QKMKGVEIKPNCVTIASVLS-GCGLIENLELGRSVH------GLSIKVGIWDTNVANALV 384
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
MY++ + ++ VF+ +++ W ++I+G+ QNG+ +AL L M + + PN
Sbjct: 385 HMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN-SESVTPNG 443
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF--NALIDMYSKCGSLDYASRVF 400
V++ S+ ACA LG L VG +HA+S K+ +S+ AL+D Y+KCG A +F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
D + ++ ITWS+MI YG G ++ +++ML+ KP+ T S+LSAC +G+V
Sbjct: 504 DTIEE-KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+EG ++S+ Y P+ + C+VDML R+G+L+QAL+ I+ MP+ P +G+ L
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLH 622
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
MH ++ + +L+L P++ S Y+ +SN YAS RW+ EVR +MK+RGL K+
Sbjct: 623 GCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKI 682
Query: 581 PGIS 584
G S
Sbjct: 683 AGHS 686
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 251/511 (49%), Gaps = 21/511 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H + NG + + T+LVS Y G +RLVF I + YLW ++ Y N
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+E + L+ ++ HG DD + K ELQDL GK I +
Sbjct: 121 KESVEVVKLY-DLLMKHG---FRYDDIVFSKALKACTELQDLDNGKKIHCQ-LVKVPSFD 175
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
++ MY++CGE A KVF+++ RNV + MI+G+ N G F
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK--NDLCEEG---LVLF 230
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
RM+ + +T +L+ + C K G+ H LVK+G++L L +SL+D
Sbjct: 231 NRMRENNVLGNEYTYGTLI-MACTKLSALHQGKWFHGCLVKSGIELSSC----LVTSLLD 285
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
MY + + +RRVF++ +L +WTAMI GY NG+ +AL L ++M+ + ++PN V
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCV 344
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
++ SVL C L+ L +G+ +H S KV + DT++ NAL+ MY+KC A VF+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
S +D + W+S+IS + +G EA+ + +M + P+ +TV S+ SAC+ G + G
Sbjct: 404 SE-KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 464 MGIYN-SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
++ S+ + +V + ++D + G Q+ I + W +++
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 523 VMHGNSM-TRDLAYRCLLELEPENPSNYISL 552
G+++ + +L L + + N S + S+
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSI 552
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 316/591 (53%), Gaps = 18/591 (3%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTR-LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSL 96
+ R Q HA +++ G N +R L+++ G+++ +R VF + + V ++NS+
Sbjct: 28 KLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSM 87
Query: 97 INGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSX 156
I Y + + L L+ +M + + PD T K L G+ + K+
Sbjct: 88 IVVYSRGKNPDEVLRLYDQMI----AEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
+SV+ +Y +CG+ +A +F +M +R+V + M++G+A G
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
F+R MQ EG+ D + LL G G GR +H YL + GL + +V
Sbjct: 204 -----FYREMQNEGFGRDRVVMLGLLQAS-GDLGDTKMGRSVHGYLYRTGLPM----NVV 253
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
+ +SL+DMY++ + ++ RVF +M + W ++I+G+ QNG A + EMQ
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ-SL 312
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
G +P+ V+L+ VL AC+ +G L G+ +H + K + D AL+DMYSKCG+L +
Sbjct: 313 GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL-DRVTATALMDMYSKCGALSSS 371
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK 456
+F++V +D + W++MIS YG+HG G+E V + KM + I+PD T S+LSA S
Sbjct: 372 REIFEHVGR-KDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSH 430
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWG 516
SGLV++G ++ +I +Y+++P+ + C++D+L R+G++++AL+ I LD +W
Sbjct: 431 SGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWV 490
Query: 517 SLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERG 576
+LL+ + H N D+A +L+L P++ +SN +A+ +W V +VR +M+
Sbjct: 491 ALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGA 550
Query: 577 LKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDGCADMD 627
++KVPG S I ++G +F + D +H + +L +L + D C+ ++
Sbjct: 551 MEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDVCSGVE 601
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 15/294 (5%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
+L LLQ + D ++ + H + G N + T LV YA G + ++ VF +
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
K W SLI+G+ +N A EM +S G PD TL + ++ L
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEM-QSLGFQ---PDLVTLVGVLVACSQVGSLK 335
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
G+L+ A ++M MYS+CG + ++F+ + ++++ +N MIS +
Sbjct: 336 TGRLVHC-YILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYG 394
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
GN G ++ F +M D T ASLL +G + G+ ++ N
Sbjct: 395 IHGN-----GQEVVSLFLKMTESNIEPDHATFASLLSA-LSHSGLVEQGQHWFSVMI-NK 447
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRN-LYVWTAMINGYVQN 319
++ S+ H LID+ +R+ ++ + + + K N L +W A+++G + +
Sbjct: 448 YKIQ-PSEKHY-VCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 302/576 (52%), Gaps = 24/576 (4%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
+ H L GF + ++ L+ Y+ + +R++F + +++ WN++I+GY ++
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 105 EFGHALVL---FREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
AL L R M D T+ ++ E D G I S
Sbjct: 231 NAKEALTLSNGLRAM-----------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
+N ++ +Y+ G D KVFD M R++ S+N +I + N L
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL--NEQPLRAISL-- 335
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F+ M+ D T+ SL + + G R + + ++ G L+ D+ +G+++
Sbjct: 336 -FQEMRLSRIQPDCLTLISLASIL-SQLGDIRACRSVQGFTLRKGWFLE---DITIGNAV 390
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+ MY++ + +R VF+ + + ++ W +I+GY QNG +A+ + M+ + + N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+ + +SVLPAC+ G L G ++H K L D + +L DMY KCG L+ A +F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ +++ W+++I+ +G HG GE+AV+ +++ML G+KPD IT V++LSACS SGLVD
Sbjct: 511 QIPRV-NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
EG + + T Y + P+++ C+VDM GR+GQL+ AL+FIK M L P S+WG+LL+A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+HGN +A L E+EPE+ ++ LSN YAS +W+ V E+R++ +GL+K P
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVA 617
G S + + F G++ HP +Y L L A
Sbjct: 690 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQA 725
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 258/497 (51%), Gaps = 28/497 (5%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HA+++ + QN ++ +LV+ Y G++ ++R F I+ ++VY WN +I+GY +
Sbjct: 74 HARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNS 133
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
+ F S G + PD T ++ K + D G I +
Sbjct: 134 SEVIRCFSLFMLSSG---LTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYV 187
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
A S++ +YSR G+A +FDEMP R++GS+N MISG+ GN + L R M
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN--AKEALTLSNGLRAM 245
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
D+ T+ SLL C + G ++ G +H Y +K+GL+ S++ + + LID+Y+
Sbjct: 246 -------DSVTVVSLLSACT-EAGDFNRGVTIHSYSIKHGLE----SELFVSNKLIDLYA 293
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+L ++VFD+M R+L W ++I Y N P A+ L +EM++ ++P+ ++LI
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLI 352
Query: 347 SVLPACALLGGLIVGKQIHAFS-TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
S+ + LG + + + F+ K D ++ NA++ MY+K G +D A VF+ +
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGM 464
D I+W+++IS Y +G EA+ Y M + G I + T VSVL ACS++G + +GM
Sbjct: 413 -TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP-LDPGPSVWGSLLTASV 523
++ L+ + + V + + DM G+ G+L+ AL +P ++ P W +L+
Sbjct: 472 KLHGRLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP--WNTLIACHG 528
Query: 524 MHGNSMTRDLAYRCLLE 540
HG+ + ++ +L+
Sbjct: 529 FHGHGEKAVMLFKEMLD 545
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 136/265 (51%), Gaps = 16/265 (6%)
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
LH LV + K +V + + L+++Y + L+R FD +++R++Y W MI+GY
Sbjct: 73 LHARLVVS----KQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYG 128
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
+ G + + + G+ P+ + SVL AC +I G +IH + K D
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDV 185
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
+ +LI +YS+ ++ A +FD + RD +W++MIS Y G +EA+ L
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMP-VRDMGSWNAMISGYCQSGNAKEALT-----LS 239
Query: 438 LGIKP-DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
G++ D +TVVS+LSAC+++G + G+ I++ I ++ ++ + + ++D+ G+L
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI-KHGLESELFVSNKLIDLYAEFGRL 298
Query: 497 DQALEFIKGMPLDPGPSVWGSLLTA 521
+ M + S W S++ A
Sbjct: 299 RDCQKVFDRMYVRDLIS-WNSIIKA 322
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 304/552 (55%), Gaps = 34/552 (6%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
++S YA +G ++ +R VF + KN WN+L++ YV+N + A +LF+
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------- 214
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGEFGDA 183
+++ L + + + G + K++ + + N+++ Y++ G+ +A
Sbjct: 215 ---ENWALVSWNCLLGGF--VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 184 MKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLP 243
++FDE P ++V ++ M+SG+ + N +L F +M + + ++L
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGY--IQNRMVEEAREL---FDKMP----ERNEVSWNAMLA 320
Query: 244 VCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKS 303
Y + + K D+ +V +++I Y++ K+ ++ +FD+M
Sbjct: 321 ---------GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 304 RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ 363
R+ W AMI GY Q+G +AL L +M+ ++G R N+ S S L CA + L +GKQ
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQME-REGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 364 IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHG 423
+H K + NAL+ MY KCGS++ A+ +F ++ +D ++W++MI+ Y HG
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHG 489
Query: 424 RGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEIC 483
GE A+ ++ M + G+KPD T+V+VLSACS +GLVD+G + ++ Y + P +
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 484 ACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEP 543
AC+VD+LGR+G L+ A +K MP +P ++WG+LL AS +HGN+ + A + +EP
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 544 ENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHP 603
EN Y+ LSN YAS RW V ++R M+++G+KKVPG SWI I TH+F+VGD+ HP
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 604 SSSLIYDMLDDL 615
I+ L++L
Sbjct: 670 EKDEIFAFLEEL 681
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 189/412 (45%), Gaps = 62/412 (15%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGH 108
Q+ Q+ F T +VS Y + + +R +F + +N WN+++ GYV+
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEM 330
Query: 109 ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN 168
A LF ++P ++ N
Sbjct: 331 AKELF-----------------------------------DVMPCRNVSTW--------N 347
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-FASTSGGDLWCFFRRMQ 227
+++ Y++CG+ +A +FD+MP+R+ S+ MI+G++ G+ F + F +M+
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR------LFVQME 401
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
EG + + +S L C + G++LH LVK G + + +G++L+ MY +
Sbjct: 402 REGGRLNRSSFSSALSTCADVVA-LELGKQLHGRLVKGGYE----TGCFVGNALLLMYCK 456
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ + +F +M +++ W MI GY ++G E AL M+ ++G++P+ ++++
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK-REGLKPDDATMVA 515
Query: 348 VLPACALLGGLIVGKQ-IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
VL AC+ G + G+Q + + + ++ + ++D+ + G L+ A + N+ +
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD---MITVVSVLSACS 455
DA W +++ A +HG E A K+ ++P+ M ++S L A S
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKI--FAMEPENSGMYVLLSNLYASS 625
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 181/404 (44%), Gaps = 58/404 (14%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FASTSGGDLW 220
N +++ Y R GEF A K+FDEMP+R++ S+NVMI G+ N F D+
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV- 157
Query: 221 CFFRRMQCEGYNA-----DAFTIASLLPVCCGKTGKWDY---------GRELHCYLVKNG 266
C + M GY DA ++ +P W+ E C L K+
Sbjct: 158 CSWNTM-LSGYAQNGCVDDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
+ + S + L+ + + KK+V +R+ FD M R++ W +I GY Q+G ++A
Sbjct: 215 ENWALVS----WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 327 ILLREMQMKD---------GMRPNKV-----SLISVLPA------CALLGGLIVGKQIHA 366
L E ++D G N++ L +P A+L G + G+++
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEM 330
Query: 367 FSTKVELNG--DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
++ + S +N +I Y++CG + A +FD + RD ++W++MI+ Y G
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQSGH 389
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
EA+ + +M + G + + + S LS C+ ++ G ++ L+ + + +
Sbjct: 390 SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV-KGGYETGCFVGN 448
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSV--WGSLLTASVMHG 526
++ M + G +++A + K M G + W +++ HG
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEM---AGKDIVSWNTMIAGYSRHG 489
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 34/315 (10%)
Query: 269 LKMG-SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALI 327
LK G SD+ + I Y R+ + + RVF +M + + MI+GY++NG E A
Sbjct: 57 LKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARK 116
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLI----VGKQIHAFSTKVELNGDTSLFNAL 383
L EM +D + N ++ G + +GK F E D +N +
Sbjct: 117 LFDEMPERDLVSWN-----------VMIKGYVRNRNLGKARELFEIMPER--DVCSWNTM 163
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
+ Y++ G +D A VFD + D ++W++++SAY + + EEA + ++ +
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEKND-VSWNALLSAYVQNSKMEEACMLFKSRENWAL--- 219
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
++ +L K + E ++S+ R V ++ +SG++D+A +
Sbjct: 220 -VSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLF 273
Query: 504 KGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE-NPSNYISLSNTYASYKRW 562
P+ W ++++ + N M + R L + PE N ++ ++ Y +R
Sbjct: 274 DESPVQD-VFTWTAMVSGYIQ--NRMVEEA--RELFDKMPERNEVSWNAMLAGYVQGERM 328
Query: 563 DVVTEVRTMMKERGL 577
++ E+ +M R +
Sbjct: 329 EMAKELFDVMPCRNV 343
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 308/576 (53%), Gaps = 17/576 (2%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
L+ +L + R L + H + + L L+ Y+ G + ++++F
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
KNV WN+++ G+ + + R+M GG+ V D+ T+ V L
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQM--LAGGEDVKADEVTILNAVPVCFHESFLP 412
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
K + S AN+ +A Y++CG A +VF + + V S+N +I G A
Sbjct: 413 SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
+ + L +M+ G D+FT+ SLL C K G+E+H ++++N
Sbjct: 473 QSNDPRLSLDAHL-----QMKISGLLPDSFTVCSLLSAC-SKLKSLRLGKEVHGFIIRNW 526
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
L+ D+ + S++ +Y +L + +FD M+ ++L W +I GY+QNG P+ AL
Sbjct: 527 LE----RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
+ R+M + G++ +S++ V AC+LL L +G++ HA++ K L D + +LIDM
Sbjct: 583 GVFRQMVLY-GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
Y+K GS+ +S+VF+ + + +W++MI YG+HG +EA+ +++M + G PD +T
Sbjct: 642 YAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLT 700
Query: 447 VVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI-KG 505
+ VL+AC+ SGL+ EG+ + + + + +KP ++ ACV+DMLGR+GQLD+AL + +
Sbjct: 701 FLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEE 760
Query: 506 MPLDPGPSVWGSLLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDV 564
M + +W SLL++ +H N M +A + L ELEPE P NY+ LSN YA +W+
Sbjct: 761 MSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK-LFELEPEKPENYVLLSNLYAGLGKWED 819
Query: 565 VTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDK 600
V +VR M E L+K G SWI ++ SF VG++
Sbjct: 820 VRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 252/518 (48%), Gaps = 21/518 (4%)
Query: 15 HTSATAFITPHNLLELL-QLTVDHRAHRLTQQCHAQILTNGFAQNP-FLTTRLVSAYATS 72
+S+ AF+ L LL Q + + + ++ H + + +N L TR+++ YA
Sbjct: 74 ESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC 133
Query: 73 GDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTL 132
G + SR VF ++ +KN++ WN++I+ Y +N + L F EM + +LPD +T
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD---LLPDHFTY 190
Query: 133 ATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQ 192
+ K + D+ G + G N++++ Y G DA+++FD MP+
Sbjct: 191 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250
Query: 193 RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW 252
RN+ S+N MI ++ G F+ S L + D T+ ++LPV C + +
Sbjct: 251 RNLVSWNSMIRVFSDNG-FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV-CAREREI 308
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM 312
G+ +H + VK L++ ++ L ++L+DMYS+ + ++ +F ++N+ W M
Sbjct: 309 GLGKGVHGWAVK----LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 313 INGYVQNGAPEDALILLREMQM-KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV 371
+ G+ G +LR+M + ++ ++V++++ +P C L K++H +S K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
E + + NA + Y+KCGSL YA RVF + + +W+++I G H + + ++
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS-KTVNSWNALI---GGHAQSNDPRLS 480
Query: 432 YQKMLQL---GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
LQ+ G+ PD TV S+LSACSK + G ++ I R ++ + + V+
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH-GFIIRNWLERDLFVYLSVLS 539
Query: 489 MLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ G+L M D W +++T + +G
Sbjct: 540 LYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNG 576
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 240/483 (49%), Gaps = 18/483 (3%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H ++ G ++ F+ LVS Y T G + + +F + +N+ WNS+I + N
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
+ +L EM +G +PD TL T+ V +++ GK + G +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N++M MYS+CG +A +F +NV S+N M+ G+++ G+ T + R+M
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT-----FDVLRQM 384
Query: 227 QC--EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
E AD TI + +PVC ++ +ELHCY +K + + + ++ +
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSL-KELHCYSLKQ----EFVYNELVANAFVAS 439
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK-DGMRPNKV 343
Y++ L ++RVF ++S+ + W A+I G+ Q+ P L L +QMK G+ P+
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR--LSLDAHLQMKISGLLPDSF 497
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
++ S+L AC+ L L +GK++H F + L D ++ +++ +Y CG L +FD +
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ ++W+++I+ Y +G + A+ +++M+ GI+ I+++ V ACS + G
Sbjct: 558 ED-KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
+ + ++ ++ I ++DM ++G + Q+ + G+ + + W +++
Sbjct: 617 REAH-AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYG 674
Query: 524 MHG 526
+HG
Sbjct: 675 IHG 677
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 160/333 (48%), Gaps = 20/333 (6%)
Query: 208 LGNFASTSGGDLWCFFRRMQC----EGYNADAFTIA----SLLPVCCGKTGKWDYGRELH 259
+ NF T GDL FR +Q + ++DAF + LL GK + GR++H
Sbjct: 50 ISNFCET--GDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH 107
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
LV L+ +D L + +I MY+ SR VFD ++S+NL+ W A+I+ Y +N
Sbjct: 108 -QLVSGSTRLR--NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN 164
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
++ L EM + P+ + V+ ACA + + +G +H K L D +
Sbjct: 165 ELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFV 224
Query: 380 FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL- 438
NAL+ Y G + A ++FD + R+ ++W+SMI + +G EE+ + +M++
Sbjct: 225 GNALVSFYGTHGFVTDALQLFD-IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 439 ---GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQ 495
PD+ T+V+VL C++ + G G++ + + ++ + + ++DM + G
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV-KLRLDKELVLNNALMDMYSKCGC 342
Query: 496 LDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
+ A + I M + W +++ G++
Sbjct: 343 ITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 279/552 (50%), Gaps = 65/552 (11%)
Query: 60 FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN-REFGHALVLFREMGR 118
F ++++ SGD++ + VFH + AKN WNSL+ G K+ A LF E+
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 119 SHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCG 178
PD ++ N +++ Y R
Sbjct: 122 --------PDTFSY-----------------------------------NIMLSCYVRNV 138
Query: 179 EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTI 238
F A FD MP ++ S+N MI+G+A G F+ M+ + +A
Sbjct: 139 NFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARE----LFYSMMEKNEVSWNAMIS 194
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
+ CG D + H + V V +++I Y ++KK+ L+ +F
Sbjct: 195 GY---IECG-----DLEKASHFFKVAPV------RGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 299 DQMK-SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
M ++NL W AMI+GYV+N PED L L R M +++G+RPN L S L C+ L
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSALLGCSELSA 299
Query: 358 LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMIS 417
L +G+QIH +K L D + +LI MY KCG L A ++F+ V +D + W++MIS
Sbjct: 300 LQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE-VMKKKDVVAWNAMIS 358
Query: 418 AYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMK 477
Y HG ++A+ +++M+ I+PD IT V+VL AC+ +GLV+ GM + S++ Y+++
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 478 PTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRC 537
P + C+VD+LGR+G+L++AL+ I+ MP P +V+G+LL A +H N + A
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 538 LLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAV 597
LL+L +N + Y+ L+N YAS RW+ V VR MKE + KVPG SWI I H F
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 598 GDKAHPSSSLIY 609
D+ HP I+
Sbjct: 539 SDRIHPELDSIH 550
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 185/620 (29%), Positives = 315/620 (50%), Gaps = 81/620 (13%)
Query: 63 TRLVSAYATSGDLNMSRLVFHS--IEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSH 120
T +VS Y SGD+ ++R VF + ++ ++N++I G+ N + A+ LF +M H
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM--KH 141
Query: 121 GGDCVLPDDYTLATI----SKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
G PD++T A++ + V+ + + V KS +N+++++YS+
Sbjct: 142 EG--FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV---SNALVSVYSK 196
Query: 177 CGE----FGDAMKVFDEMPQRNVGSFNVMISGWASLGNF--------------------A 212
C A KVFDE+ +++ S+ M++G+ G F A
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 213 STSGGDLWCFF-------RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKN 265
SG F+ RRM G D FT S++ C G G+++H Y+++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC-ATAGLLQLGKQVHAYVLR- 314
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
+ H +SL+ +Y + K +R +F++M +++L W A+++GYV +G +A
Sbjct: 315 ----REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 326 LILLREMQMK------------------------------DGMRPNKVSLISVLPACALL 355
++ +EM+ K +G P + + +CA+L
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
G G+Q HA K+ + S NALI MY+KCG ++ A +VF + D+++W+++
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNAL 489
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
I+A G HG G EAV Y++ML+ GI+PD IT+++VL+ACS +GLVD+G ++S+ T Y+
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAY 535
+ P + A ++D+L RSG+ A I+ +P P +W +LL+ +HGN +A
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 536 RCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSF 595
L L PE+ Y+ LSN +A+ +W+ V VR +M++RG+KK SWI + H+F
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669
Query: 596 AVGDKAHPSSSLIYDMLDDL 615
V D +HP + +Y L DL
Sbjct: 670 LVDDTSHPEAEAVYIYLQDL 689
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 149/355 (41%), Gaps = 77/355 (21%)
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
R +H ++ G + H+ + LID+Y +S +L +R++FD++ + T M++
Sbjct: 33 ARAVHGNIITFGFQPR----AHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 315 GY-------VQNGAPEDALILLREMQM-------------------------KDGMRPNK 342
GY + G E A + +R+ M +G +P+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 343 VSLISVLPACALLG-GLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS----LDYAS 397
+ SVL AL+ Q HA + K TS+ NAL+ +YSKC S L A
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 398 RVFDNVSYFRDAITWSSMISAY------------------------------GLHGRG-- 425
+VFD + +D +W++M++ Y G RG
Sbjct: 209 KVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 426 EEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICAC 485
+EA+ ++M+ GI+ D T SV+ AC+ +GL+ G ++ ++ R +
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNS 325
Query: 486 VVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLE 540
+V + + G+ D+A + MP S W +LL+ V G+ L ++ + E
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALLSGYVSSGHIGEAKLIFKEMKE 379
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 304/577 (52%), Gaps = 20/577 (3%)
Query: 41 RLTQQCHAQIL-TNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
+L ++ HA +L ++ + ++ L++ Y G + + + + +V WNSLI G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 100 YVKNREFGHALVLFREM-GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX 158
YV+N + AL F +M H D + ++ +I SG L +L+ G +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSD-----EVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
N+++ MYS+C + F M +++ S+ +I+G+A N +
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ--NDCHVEALE 473
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
L FR + + D + S+L +E+HC++++ GL D +
Sbjct: 474 L---FRDVAKKRMEIDEMILGSILRAS-SVLKSMLIVKEIHCHILRKGL-----LDTVIQ 524
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
+ L+D+Y + + + + RVF+ +K +++ WT+MI+ NG +A+ L R M ++ G+
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGL 583
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
+ V+L+ +L A A L L G++IH + + + S+ A++DMY+ CG L A
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
VFD + + + ++SMI+AYG+HG G+ AV + KM + PD I+ +++L ACS +G
Sbjct: 644 VFDRIER-KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Query: 459 LVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSL 518
L+DEG G + Y+++P E C+VDMLGR+ + +A EF+K M +P VW +L
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Query: 519 LTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
L A H ++A + LLELEP+NP N + +SN +A RW+ V +VR MK G++
Sbjct: 763 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Query: 579 KVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
K PG SWI + G H F DK+HP S IY+ L ++
Sbjct: 823 KHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 253/519 (48%), Gaps = 32/519 (6%)
Query: 30 LLQLTVDHRAHRLTQQCHAQIL-TNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
+L+L RA +Q H++I T + FL +LV Y G L+ + VF + +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
+ WN++I YV N E AL L+ M R G L + + K +L+D+ G
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLS---SFPALLKACAKLRDIRSG 201
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASL 208
+ N++++MY++ + A ++FD ++ W S+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL------WNSI 255
Query: 209 GNFASTSGGDLWC--FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
+ STSG L FR M G +++TI S L C G + G+E+H ++K+
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA-KLGKEIHASVLKSS 314
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
S++++ ++LI MY+R K+ + R+ QM + ++ W ++I GYVQN ++AL
Sbjct: 315 TH---SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
+M + G + ++VS+ S++ A L L+ G ++HA+ K + + + N LIDM
Sbjct: 372 EFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
YSKC Y R F + + +D I+W+++I+ Y + EA+ ++ + + ++ D +
Sbjct: 431 YSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 447 VVSVLSACS--KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRS---GQLDQALE 501
+ S+L A S KS L+ + + + I R + TV I +VD+ G+ G + E
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCH---ILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFE 545
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLE 540
IKG + W S++++S ++GN +R ++E
Sbjct: 546 SIKGKDV----VSWTSMISSSALNGNESEAVELFRRMVE 580
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 151/319 (47%), Gaps = 13/319 (4%)
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F+R+ N+ A +L +C GK GR+LH + K ++ L L+
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELC-GKRRAVSQGRQLHSRIFKTFPSFELD---FLAGKLV 123
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
MY + L + +VFD+M R + W MI YV NG P AL L M++ +G+
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGL 182
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
S ++L ACA L + G ++H+ K+ + + NAL+ MY+K L A R+FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
DA+ W+S++S+Y G+ E + +++M G P+ T+VS L+AC
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G I+ S++ + +C ++ M R G++ QA ++ M + W SL+
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGY 361
Query: 523 VMHGNSMTRDLAYRCLLEL 541
V ++L Y+ LE
Sbjct: 362 V-------QNLMYKEALEF 373
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 304/603 (50%), Gaps = 47/603 (7%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H I+ G+A++ F+ LV YA G+L+ +R VF + +NV W S+I GY + R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR-R 213
Query: 105 EFGH-ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+F A+ LF M R V P+ T+ + +L+DL G+ +
Sbjct: 214 DFAKDAVDLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
++++ MY +C A ++FDE N+ N M S + G G F
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG-----VF 325
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M G D ++ S + C + +G+ H Y+++NG + S ++ ++LID
Sbjct: 326 NLMMDSGVRPDRISMLSAIS-SCSQLRNILWGKSCHGYVLRNGFE----SWDNICNALID 380
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP--------------------- 322
MY + + + R+FD+M ++ + W +++ GYV+NG
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 323 ----------EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
E+A+ + MQ ++G+ + V+++S+ AC LG L + K I+ + K
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
+ D L L+DM+S+CG + A +F++++ RD W++ I A + G E A+ +
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
M++ G+KPD + V L+ACS GLV +G I+ S++ + + P C+VD+LGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 493 SGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISL 552
+G L++A++ I+ MP++P +W SLL A + GN A + L PE +Y+ L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 553 SNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
SN YAS RW+ + +VR MKE+GL+K PG S I I G TH F GD++HP I ML
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 613 DDL 615
D++
Sbjct: 740 DEV 742
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 256/545 (46%), Gaps = 65/545 (11%)
Query: 1 MVLRKTFTLTTSRYHTSATAFITP---HNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQ 57
MVL T T S + S TP N + +L + HR+ LT+Q G
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRS--LTKQ--------GLDN 62
Query: 58 NPFLTTRLVS---AYATSGDLNMSRLVFHSIEA-KNVYLWNSLINGYVKNREFGHALVLF 113
+ T+LV+ T L+ ++ VF + E+ +++NSLI GY + A++LF
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 114 REMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAM 173
M S + PD YT + + G I G NS++
Sbjct: 123 LRMMNSG----ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 174 YSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNA 233
Y+ CGE A KVFDEM +RNV S+ MI G+A +FA DL FFR ++ E
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DFAK-DAVDL--FFRMVRDEEVTP 234
Query: 234 DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL 293
++ T+ ++ C K + G +++ ++ +G+++ +D+ + S+L+DMY + + +
Sbjct: 235 NSVTMVCVISA-CAKLEDLETGEKVYAFIRNSGIEV---NDLMV-SALVDMYMKCNAIDV 289
Query: 294 SRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
++R+FD+ + NL + AM + YV+ G +AL + M M G+RP+++S++S + +C+
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISMLSAISSCS 348
Query: 354 LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
L ++ GK H + + ++ NALIDMY KC D A R+FD +S + +TW+
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN-KTVVTWN 407
Query: 414 SMISAYGLHGRGEEAVVTYQKM--------------------------------LQLGIK 441
S+++ Y +G + A T++ M Q G+
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
D +T++S+ SAC G +D IY I + ++ V + +VDM R G + A+
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 502 FIKGM 506
+
Sbjct: 527 IFNSL 531
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 187/392 (47%), Gaps = 16/392 (4%)
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
+N +I G+AS G + F RM G + D +T L C K + G +
Sbjct: 102 YNSLIRGYASSG-----LCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN-GIQ 155
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H +VK G D+ + +SL+ Y+ +L +R+VFD+M RN+ WT+MI GY
Sbjct: 156 IHGLIVKMGY----AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
+ +DA+ L M + + PN V+++ V+ ACA L L G++++AF + +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
+ +AL+DMY KC ++D A R+FD + ++M S Y G EA+ + M+
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMD 330
Query: 438 LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
G++PD I+++S +S+CS+ + G + + R + IC ++DM + + D
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCH-GYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 498 QALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 557
A M + W S++ V +G D A+ + +N ++ ++ +
Sbjct: 390 TAFRIFDRMS-NKTVVTWNSIVAGYVENGEV---DAAWETFETMPEKNIVSWNTIISGLV 445
Query: 558 SYKRWDVVTEVRTMMKERGLKKVPGISWITIS 589
++ EV M+ + G++ ++I+
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 288/549 (52%), Gaps = 20/549 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYAT---SGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
Q H ++ + +N +RL+ T + +L+ +R VF SI+ +VY+WNS+I GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+ AL+ ++EM R PD +T + K L+D+ +G + G
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYS----PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF 138
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+ ++ MY CGE ++VF+++PQ NV ++ +ISG+ + F+ D
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFS-----DAI 193
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL----KMGSDVH 276
FR MQ G A+ + LL V CG+ G+ H +L G D K+G +V
Sbjct: 194 EAFREMQSNGVKANETIMVDLL-VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVI 252
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
L +SLIDMY++ L +R +FD M R L W ++I GY QNG E+AL + +M +
Sbjct: 253 LATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDL 311
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
G+ P+KV+ +SV+ A + G +G+ IHA+ +K D ++ AL++MY+K G + A
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDMITVVSVLSACS 455
+ F+++ +D I W+ +I HG G EA+ +Q+M + G PD IT + VL ACS
Sbjct: 372 KKAFEDLEK-KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVW 515
GLV+EG + + + ++PTVE C+VD+L R+G+ ++A +K MP+ P ++W
Sbjct: 431 HIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIW 490
Query: 516 GSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKER 575
G+LL +H N D + E E Y+ LSN YA RW V +R MK +
Sbjct: 491 GALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSK 550
Query: 576 GLKKVPGIS 584
+ KV G S
Sbjct: 551 RVDKVLGHS 559
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 304/603 (50%), Gaps = 47/603 (7%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H I+ G+A++ F+ LV YA G+L+ +R VF + +NV W S+I GY + R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR-R 213
Query: 105 EFGH-ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+F A+ LF M R V P+ T+ + +L+DL G+ +
Sbjct: 214 DFAKDAVDLFFRMVRDEE---VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
++++ MY +C A ++FDE N+ N M S + G G F
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG-----VF 325
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M G D ++ S + C + +G+ H Y+++NG + S ++ ++LID
Sbjct: 326 NLMMDSGVRPDRISMLSAIS-SCSQLRNILWGKSCHGYVLRNGFE----SWDNICNALID 380
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP--------------------- 322
MY + + + R+FD+M ++ + W +++ GYV+NG
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 323 ----------EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
E+A+ + MQ ++G+ + V+++S+ AC LG L + K I+ + K
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
+ D L L+DM+S+CG + A +F++++ RD W++ I A + G E A+ +
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
M++ G+KPD + V L+ACS GLV +G I+ S++ + + P C+VD+LGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 493 SGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISL 552
+G L++A++ I+ MP++P +W SLL A + GN A + L PE +Y+ L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 553 SNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
SN YAS RW+ + +VR MKE+GL+K PG S I I G TH F GD++HP I ML
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 613 DDL 615
D++
Sbjct: 740 DEV 742
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 256/545 (46%), Gaps = 65/545 (11%)
Query: 1 MVLRKTFTLTTSRYHTSATAFITP---HNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQ 57
MVL T T S + S TP N + +L + HR+ LT+Q G
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRS--LTKQ--------GLDN 62
Query: 58 NPFLTTRLVS---AYATSGDLNMSRLVFHSIEA-KNVYLWNSLINGYVKNREFGHALVLF 113
+ T+LV+ T L+ ++ VF + E+ +++NSLI GY + A++LF
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 114 REMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAM 173
M S + PD YT + + G I G NS++
Sbjct: 123 LRMMNSG----ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 174 YSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNA 233
Y+ CGE A KVFDEM +RNV S+ MI G+A +FA DL FFR ++ E
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DFAK-DAVDL--FFRMVRDEEVTP 234
Query: 234 DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL 293
++ T+ ++ C K + G +++ ++ +G+++ +D+ + S+L+DMY + + +
Sbjct: 235 NSVTMVCVISA-CAKLEDLETGEKVYAFIRNSGIEV---NDLMV-SALVDMYMKCNAIDV 289
Query: 294 SRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
++R+FD+ + NL + AM + YV+ G +AL + M M G+RP+++S++S + +C+
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISMLSAISSCS 348
Query: 354 LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
L ++ GK H + + ++ NALIDMY KC D A R+FD +S + +TW+
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN-KTVVTWN 407
Query: 414 SMISAYGLHGRGEEAVVTYQKML--------------------------------QLGIK 441
S+++ Y +G + A T++ M Q G+
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
D +T++S+ SAC G +D IY I + ++ V + +VDM R G + A+
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 502 FIKGM 506
+
Sbjct: 527 IFNSL 531
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 187/392 (47%), Gaps = 16/392 (4%)
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
+N +I G+AS G + F RM G + D +T L C K + G +
Sbjct: 102 YNSLIRGYASSG-----LCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN-GIQ 155
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H +VK G D+ + +SL+ Y+ +L +R+VFD+M RN+ WT+MI GY
Sbjct: 156 IHGLIVKMGY----AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
+ +DA+ L M + + PN V+++ V+ ACA L L G++++AF + +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
+ +AL+DMY KC ++D A R+FD + ++M S Y G EA+ + M+
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 438 LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
G++PD I+++S +S+CS+ + G + + R + IC ++DM + + D
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCH-GYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 498 QALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 557
A M + W S++ V +G D A+ + +N ++ ++ +
Sbjct: 390 TAFRIFDRMS-NKTVVTWNSIVAGYVENGEV---DAAWETFETMPEKNIVSWNTIISGLV 445
Query: 558 SYKRWDVVTEVRTMMKERGLKKVPGISWITIS 589
++ EV M+ + G++ ++I+
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/587 (32%), Positives = 305/587 (51%), Gaps = 60/587 (10%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HA + NG + L T L++ Y G + + +VF + K+V WN +I+GYV+
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 104 REFGHALVLFREMGRSH-GGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
A+ + + M DCV TLAT+ + ++L GK +
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCV-----TLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
A++VM MY++CG DA KVFD ++++ +N +++ +A G SG L F
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG----LSGEALRLF 464
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
+ MQ EG + T W+ + L++NG
Sbjct: 465 YG-MQLEGVPPNVIT--------------WNL---IILSLLRNG---------------- 490
Query: 283 DMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
++ ++ +F QM+S NL WT M+NG VQNG E+A++ LR+MQ + G+
Sbjct: 491 -------QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ-ESGL 542
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAFSTK-VELNGDTSLFNALIDMYSKCGSLDYAS 397
RPN S+ L ACA L L +G+ IH + + ++ + S+ +L+DMY+KCG ++ A
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAE 602
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+VF + Y ++ ++MISAY L+G +EA+ Y+ + +G+KPD IT+ +VLSAC+ +
Sbjct: 603 KVFGSKLYSELPLS-NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHA 661
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
G +++ + I+ ++++ MKP +E +VD+L +G+ ++AL I+ MP P + S
Sbjct: 662 GDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQS 721
Query: 518 LLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
L+ + + D R LLE EPEN NY+++SN YA WD V ++R MMK +GL
Sbjct: 722 LVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGL 781
Query: 578 KKVPGISWITISGN--THSFAVGDKAHPSSSLIYDMLDDLVAIMTDG 622
KK PG SWI I+G H F DK H + I ML L+ M G
Sbjct: 782 KKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGTG 828
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 233/448 (52%), Gaps = 18/448 (4%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNG--FAQNPFLTTRLVSAYATSGDLNMSR 79
I P E+LQ V R +Q HA+IL NG +A+N ++ T+LV YA L ++
Sbjct: 68 IGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAE 127
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
++F + +NV+ W ++I + AL+ F EM + + PD++ + + K
Sbjct: 128 VLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE----IFPDNFVVPNVCKAC 183
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
G L+ +G+ + G A+S+ MY +CG DA KVFDE+P RN ++N
Sbjct: 184 GALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWN 243
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
++ G+ G + F M+ +G T+++ L G + G++ H
Sbjct: 244 ALMVGYVQNGK-----NEEAIRLFSDMRKQGVEPTRVTVSTCLSA-SANMGGVEEGKQSH 297
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
+ NG++L D LG+SL++ Y + + + VFD+M +++ W +I+GYVQ
Sbjct: 298 AIAIVNGMEL----DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
G EDA+ + + M++ + ++ + V+L +++ A A L +GK++ + + D L
Sbjct: 354 GLVEDAIYMCQLMRL-EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 380 FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
+ ++DMY+KCGS+ A +VFD+ + +D I W+++++AY G EA+ + M G
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIY 467
+ P++IT ++ + ++G VDE ++
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMF 499
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 295/571 (51%), Gaps = 20/571 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ HA ++ GF + ++ L+S Y G + VF + +++ WNS+I+GY+
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ +L+LF+EM + PD ++ + + GK I +
Sbjct: 210 GDGFSSLMLFKEMLKCG----FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 164 XXXA-NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
S++ MYS+ GE A ++F+ M QRN+ ++NVMI +A G CF
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA----FLCF 321
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
+ + G D T +LLP G R +H Y ++ G M L ++LI
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILEG-----RTIHGYAMRRGFLPHMV----LETALI 372
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
DMY +L + +FD+M +N+ W ++I YVQNG AL L +E+ + P+
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDS 431
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
++ S+LPA A L G++IHA+ K +T + N+L+ MY+ CG L+ A + F++
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ +D ++W+S+I AY +HG G +V + +M+ + P+ T S+L+ACS SG+VDE
Sbjct: 492 I-LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G + S+ Y + P +E C++D++GR+G A F++ MP P +WGSLL AS
Sbjct: 551 GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNAS 610
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPG 582
H + + A + ++E +N Y+ L N YA RW+ V ++ +M+ +G+ +
Sbjct: 611 RNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSS 670
Query: 583 ISWITISGNTHSFAVGDKAHPSSSLIYDMLD 613
S + G +H F GD++H +++ IY++LD
Sbjct: 671 RSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 190/351 (54%), Gaps = 20/351 (5%)
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASL 241
DA+++FDEM + + +NVMI G+ S G + F+ RM G AD FT +
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQ-----FYSRMVFAGVKADTFTYPFV 136
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
+ G + G+++H ++K G SDV++ +SLI +Y + + +VF++M
Sbjct: 137 IKSVAG-ISSLEEGKKIHAMVIKLGF----VSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
R++ W +MI+GY+ G +L+L +EM +K G +P++ S +S L AC+ + +G
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 362 KQIHAFSTKVELN-GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
K+IH + + + GD + +++DMYSK G + YA R+F+ + R+ + W+ MI Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ-RNIVAWNVMIGCYA 309
Query: 421 LHGRGEEAVVTYQKM-LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
+GR +A + +QKM Q G++PD+IT +++L A + + EG I+ + R P
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPH 364
Query: 480 VEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMT 530
+ + ++DM G GQL A E I + W S++ A V +G + +
Sbjct: 365 MVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 296 RVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
++FD+M + ++W MI G+ G +A+ M G++ + + V+ + A +
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGI 143
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
L GK+IHA K+ D + N+LI +Y K G A +VF+ + RD ++W+SM
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE-RDIVSWNSM 202
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
IS Y G G +++ +++ML+ G KPD + +S L ACS G I+ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAY 535
V + ++DM + G++ A GM + W ++ +G A+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTD---AF 318
Query: 536 RCLLELEPEN 545
C ++ +N
Sbjct: 319 LCFQKMSEQN 328
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 297/571 (52%), Gaps = 30/571 (5%)
Query: 58 NPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMG 117
N F +V AYA ++++R +F I + +N+LI+GY RE A+VLF+ M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM- 131
Query: 118 RSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRC 177
R G + D +TL+ + + DL+ K + S N+ + YS+
Sbjct: 132 RKLGFEV---DGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 178 GEFGDAMKVFDEMPQ-RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAF 236
G +A+ VF M + R+ S+N MI + G ++ M +G+ D F
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQ-----HKEGAKALALYKEMIFKGFKIDMF 241
Query: 237 TIASLLPVCCGKTGKWDY---GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS---KK 290
T+AS+L D+ GR+ H L+K G + H+GS LID YS+
Sbjct: 242 TLASVL----NALTSLDHLIGGRQFHGKLIKAGFH----QNSHVGSGLIDFYSKCGGCDG 293
Query: 291 LVLSRRVFDQMKSRNLYVWTAMINGYVQNGA-PEDALILLREMQMKDGMRPNKVSLISVL 349
+ S +VF ++ S +L VW MI+GY N E+A+ R+MQ + G RP+ S + V
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ-RIGHRPDDCSFVCVT 352
Query: 350 PACALLGGLIVGKQIHAFSTKVELNGD-TSLFNALIDMYSKCGSLDYASRVFDNVSYFRD 408
AC+ L KQIH + K + + S+ NALI +Y K G+L A VFD + +
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL-N 411
Query: 409 AITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYN 468
A++++ MI Y HG G EA++ YQ+ML GI P+ IT V+VLSAC+ G VDEG +N
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471
Query: 469 SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
++ ++++P E +C++D+LGR+G+L++A FI MP PG W +LL A H N
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM 531
Query: 529 MTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITI 588
+ A L+ ++P + Y+ L+N YA ++W+ + VR M+ + ++K PG SWI +
Sbjct: 532 ALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591
Query: 589 SGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
H F D +HP + + L++++ M
Sbjct: 592 KKKKHVFVAEDWSHPMIREVNEYLEEMMKKM 622
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 186/386 (48%), Gaps = 18/386 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI-EAKNVYLWNSLINGY 100
L +Q H ++ GF + V+ Y+ G L + VF+ + E ++ WNS+I Y
Sbjct: 156 LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAY 215
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+++E AL L++EM G + D +TLA++ L L+ G+ GK
Sbjct: 216 GQHKEGAKALALYKEM--IFKGFKI--DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 161 XXXXXXANSVMAMYSRCG---EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
+ ++ YS+CG D+ KVF E+ ++ +N MISG++ + +
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVK 331
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
FR+MQ G+ D + + C + +++H +K+ + + + +
Sbjct: 332 S----FRQMQRIGHRPDDCSFVCVTSACSNLSSP-SQCKQIHGLAIKSHIP---SNRISV 383
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
++LI +Y +S L +R VFD+M N + MI GY Q+G +AL+L + M + G
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM-LDSG 442
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQ-IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
+ PNK++ ++VL ACA G + G++ + ++ + ++ +ID+ + G L+ A
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLH 422
R D + Y ++ W++++ A H
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKH 528
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 297/562 (52%), Gaps = 18/562 (3%)
Query: 57 QNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM 116
++ L T L+ +Y G + +R +F + ++V W ++I GY + A F EM
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 117 GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
+ P+++TL+++ K ++ L YG L+ G N++M MY+
Sbjct: 103 VKQGTS----PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 177 CG-EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADA 235
C A +F ++ +N ++ +I+G+ LG+ G +++M E
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGD-----GIGGLKMYKQMLLENAEVTP 213
Query: 236 FTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSR 295
+ I ++ G+++H ++K G S++ + +S++D+Y R L ++
Sbjct: 214 YCI-TIAVRASASIDSVTTGKQIHASVIKRGFQ----SNLPVMNSILDLYCRCGYLSEAK 268
Query: 296 RVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
F +M+ ++L W +I+ ++ + E AL++ + + G PN + S++ ACA +
Sbjct: 269 HYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFE-SQGFVPNCYTFTSLVAACANI 326
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
L G+Q+H + N + L NALIDMY+KCG++ + RVF + R+ ++W+SM
Sbjct: 327 AALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSM 386
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
+ YG HG G EAV + KM+ GI+PD I ++VLSAC +GLV++G+ +N + + Y
Sbjct: 387 MIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYG 446
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG-NSMTRDLA 534
+ P +I CVVD+LGR+G++ +A E ++ MP P S WG++L A H N + LA
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLA 506
Query: 535 YRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHS 594
R ++EL+P+ Y+ LS YA+ +W VR MM+ G KK G+SWI + S
Sbjct: 507 ARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFS 566
Query: 595 FAVGDKAHPSSSLIYDMLDDLV 616
FAV DK P++S +Y +L L+
Sbjct: 567 FAVSDKMCPNASSVYSVLGLLI 588
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 20 AFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
A +TP+ + ++ + + +Q HA ++ GF N + ++ Y G L+ ++
Sbjct: 209 AEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAK 268
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
FH +E K++ WN+LI+ ++ + AL++F+ S G +P+ YT ++
Sbjct: 269 HYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRF-ESQG---FVPNCYTFTSLVAAC 323
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM-PQRNVGSF 198
+ L G+ + G+ AN+++ MY++CG D+ +VF E+ +RN+ S+
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383
Query: 199 NVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGREL 258
M+ G+ S G G + F +M G D ++L C
Sbjct: 384 TSMMIGYGSHG-----YGAEAVELFDKMVSSGIRPDRIVFMAVLSAC------------R 426
Query: 259 HCYLVKNGL--------DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
H LV+ GL + + D + + ++D+ R+ K+ + + ++M
Sbjct: 427 HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 301/577 (52%), Gaps = 20/577 (3%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L QQ H L G ++ L++ Y +R VF ++ +++ WNS+I G
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 102 KNREFGHALVLFREMGRSHGGDCVL-PDDYTLATISKVSGELQD-LVYGKLIPGKSXXXX 159
+N A+ LF ++ R C L PD YT+ ++ K + L + L K + +
Sbjct: 393 QNGLEVEAVCLFMQLLR-----CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 160 XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL 219
+ +++ YSR +A +F E ++ ++N M++G+ S G
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQ-----SHDGHKT 501
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
F M +G +D FT+A++ C G + G+++H Y +K+G DL D+ + S
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTC-GFLFAINQGKQVHAYAIKSGYDL----DLWVSS 556
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
++DMY + + ++ FD + + WT MI+G ++NG E A + +M++ G+
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM-GVL 615
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
P++ ++ ++ A + L L G+QIHA + K+ D + +L+DMY+KCGS+D A +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F + + W++M+ HG G+E + +++M LGIKPD +T + VLSACS SGL
Sbjct: 676 FKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
V E S+ Y +KP +E +C+ D LGR+G + QA I+ M ++ S++ +LL
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 520 TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
A + G++ T LLELEP + S Y+ LSN YA+ +WD + RTMMK +KK
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 854
Query: 580 VPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLV 616
PG SWI + H F V D+++ + LIY + D++
Sbjct: 855 DPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 891
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 191/416 (45%), Gaps = 57/416 (13%)
Query: 47 HAQILTNGFAQNP--FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
HA+ILT F +NP FL L+S Y+ G L +R VF + +++ WNS++ Y ++
Sbjct: 62 HARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSS 119
Query: 105 E-----FGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXX 159
E A +LFR + + D V TL+ + K+ + + G +
Sbjct: 120 ECVVENIQQAFLLFRILRQ----DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 160 XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL 219
A +++ +Y + G+ + +F+EMP R+V +N+M+ + +G DL
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG--FKEEAIDL 233
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
F G N + T+ LL G D G+ VK+ G+D S
Sbjct: 234 SSAF---HSSGLNPNEITL-RLLARISGDDS--DAGQ------VKS---FANGND---AS 275
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
S+ ++ R+K L + Y+ +G L +M D +
Sbjct: 276 SVSEIIFRNKGL----------------------SEYLHSGQYSALLKCFADMVESD-VE 312
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
++V+ I +L + L +G+Q+H + K+ L+ ++ N+LI+MY K +A V
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
FDN+S RD I+W+S+I+ +G EAV + ++L+ G+KPD T+ SVL A S
Sbjct: 373 FDNMSE-RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 144 DLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
DL+ GK + N++++MYS+CG A +VFD+MP R++ S+N +++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
+A + + FR ++ + T++ +L +C W H Y
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW-ASESFHGYAC 172
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
K GLD D + +L+++Y + K+ + +F++M R++ +W M+ Y++ G E
Sbjct: 173 KIGLD----GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE 228
Query: 324 DALILLREMQMKDGMRPNKVSL 345
+A+ L G+ PN+++L
Sbjct: 229 EAIDLSSAFH-SSGLNPNEITL 249
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 358 LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMIS 417
L++GK HA E N + L N LI MYSKCGSL YA RVFD + RD ++W+S+++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWNSILA 113
Query: 418 AYGLHGRG-----EEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
AY ++A + ++ + Q + +T+ +L C SG V
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/575 (30%), Positives = 288/575 (50%), Gaps = 20/575 (3%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H ++ NG +Q FL L+ Y+ G L+ + +F + ++ WNSLI+GYV+
Sbjct: 171 HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAA 230
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKV------SGELQDLVYGKLIPGKSXXXXX 160
L L +M R D + Y L ++ K G ++ G I +
Sbjct: 231 EEPLNLLAKMHR----DGLNLTTYALGSVLKACCINLNEGFIEK---GMAIHCYTAKLGM 283
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+++ MY++ G +A+K+F MP +NV ++N MISG+ + + + +
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F MQ G T + +L C +YGR++H + KN SD +GS+
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSA-AKTLEYGRQIHALICKNNFQ----SDEFIGSA 398
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
LI++Y+ + F +++ WT+MI+ +VQN E A L R++ +RP
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRP 457
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ ++ ++ ACA L G+QI ++ K ++ TS+ + I MY+K G++ A++VF
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
V D T+S+MIS+ HG EA+ ++ M GIKP+ + VL AC GLV
Sbjct: 518 IEVQN-PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+G+ + + Y++ P + C+VD+LGR+G+L A I P W +LL+
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
+ ++ +S+ L+ELEPE +Y+ L N Y EVR +M++RG+KK
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 581 PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
P +SWI I THSFAV D +HPSS +IY ML+ +
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 241/518 (46%), Gaps = 60/518 (11%)
Query: 69 YATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPD 128
Y +L +R +F + +N+ +NSLI+GY + + A+ LF E ++ + D
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN----LKLD 147
Query: 129 DYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFD 188
+T A GE DL G+L+ G N ++ MYS+CG+ AM +FD
Sbjct: 148 KFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Query: 189 EMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCG- 247
+R+ S+N +ISG+ +G + + +M +G N + + S+L CC
Sbjct: 208 RCDERDQVSWNSLISGYVRVG-----AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCIN 262
Query: 248 -KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL 306
G + G +HCY K G++ D+ + ++L+DMY+++ L + ++F M S+N+
Sbjct: 263 LNEGFIEKGMAIHCYTAKLGMEF----DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
Query: 307 YVWTAMINGYVQ-----NGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
+ AMI+G++Q + A +A L +MQ + G+ P+ + VL AC+ L G
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQ-RRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
+QIHA K D + +ALI++Y+ GS + + F + S +D +W+SMI +
Sbjct: 378 RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK-QDIASWTSMIDCHVQ 436
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
+ + E A ++++ I+P+ TV ++SAC+ + G
Sbjct: 437 NEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG------------------ 478
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV-MHGNSMTRDLAYRCLLE 540
E I+G + G + S+ T+S+ M+ S LA + +E
Sbjct: 479 -------------------EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 541 LEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
++ + + Y ++ ++ A + + + MK G+K
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 181/365 (49%), Gaps = 21/365 (5%)
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
+V GKL G N+++ MY +C E G A ++FD MP+RN+ SFN +ISG
Sbjct: 63 VVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISG 122
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
+ +G + F + D FT A L CG+ D G LH +V
Sbjct: 123 YTQMGFYEQAME-----LFLEAREANLKLDKFTYAGALGF-CGERCDLDLGELLHGLVVV 176
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPED 324
NGL V L + LIDMYS+ KL + +FD+ R+ W ++I+GYV+ GA E+
Sbjct: 177 NGL----SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACAL---LGGLIVGKQIHAFSTKVELNGDTSLFN 381
L LL +M +DG+ +L SVL AC + G + G IH ++ K+ + D +
Sbjct: 233 PLNLLAKMH-RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT 291
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR-----GEEAVVTYQKML 436
AL+DMY+K GSL A ++F + ++ +T+++MIS + EA + M
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPS-KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+ G++P T VL ACS + ++ G I+ +LI + + I + ++++ G
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIH-ALICKNNFQSDEFIGSALIELYALMGST 409
Query: 497 DQALE 501
+ ++
Sbjct: 410 EDGMQ 414
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 17/221 (7%)
Query: 319 NGAPEDALILLREMQMKDGMR-------PNKVSLIS-----VLPACALLGGLIVGKQIHA 366
N +D+L+ L ++ G R P +L S + A G +++GK H
Sbjct: 12 NNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHG 71
Query: 367 FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGE 426
K LN L N L++MY KC L +A ++FD + R+ I+++S+IS Y G E
Sbjct: 72 HMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE-RNIISFNSLISGYTQMGFYE 130
Query: 427 EAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
+A+ + + + +K D T L C + +D G + + L+ + V + +
Sbjct: 131 QAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVL 189
Query: 487 VDMLGRSGQLDQALEFIKGMPLDPGPSV-WGSLLTASVMHG 526
+DM + G+LDQA+ D V W SL++ V G
Sbjct: 190 IDMYSKCGKLDQAMSLFD--RCDERDQVSWNSLISGYVRVG 228
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 305/593 (51%), Gaps = 34/593 (5%)
Query: 31 LQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNV 90
L V L Q + ++ G + + ++ Y+ SG +R VF + K++
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM 240
Query: 91 YLWNSLINGYVKNREFG-HALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK 149
WNSL++G + FG A+V+FR+M R + V D + ++ DL +
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMR----EGVELDHVSFTSVITTCCHETDLKLAR 296
Query: 150 LIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG 209
I G N +M+ YS+CG VF +M +RNV S+ MIS
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS------ 350
Query: 210 NFASTSGGDLWCFFRRMQCEGYNADAFTIASLL-PVCCGKTGKWDYGRELHCYLVKNGLD 268
++ D F M+ +G + T L+ V C + K G ++H +K G
Sbjct: 351 ----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK--EGLKIHGLCIKTGFV 404
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALIL 328
S+ +G+S I +Y++ + L +++ F+ + R + W AMI+G+ QNG +AL +
Sbjct: 405 ----SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 329 LREMQMKDGMRPNKVSLISVLPACALLGGLIV--GKQIHAFSTKVELNGDTSLFNALIDM 386
+ PN+ + SVL A A + V G++ HA K+ LN + +AL+DM
Sbjct: 461 F--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
Y+K G++D + +VF+ +S ++ W+S+ISAY HG E + + KM++ + PD++T
Sbjct: 519 YAKRGNIDESEKVFNEMSQ-KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 447 VVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
+SVL+AC++ G+VD+G I+N +I Y ++P+ E +C+VDMLGR+G+L +A E + +
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 507 PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVT 566
P PG S+ S+L + +HGN +E++PE +Y+ + N YA + WD
Sbjct: 638 PGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAA 697
Query: 567 EVRTMMKERGLKKVPGISWITISGNT------HSFAVGDKAHPSSSLIYDMLD 613
E+R M+++ + K G SWI + G+T F+ GDK+HP S IY M++
Sbjct: 698 EIRKAMRKKNVSKEAGFSWIDV-GDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 231/488 (47%), Gaps = 28/488 (5%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H T+GF ++ ++ Y +G + + +F ++ +V WN++++G+ N+
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ 156
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
+ +V + G V+ D +T +T + + G +
Sbjct: 157 IALNFVVRMKSAG-------VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDL 209
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
NS + MYSR G F A +VFDEM +++ S+N ++SG + G F G + FR
Sbjct: 210 VVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF----GFEAVVIFR 265
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
M EG D + S++ CC +T R++H +K G + S + +G+ L+
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHET-DLKLARQIHGLCIKRGYE----SLLEVGNILMSR 320
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
YS+ L + VF QM RN+ WT MI + +DA+ + M+ DG+ PN+V+
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRF-DGVYPNEVT 374
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
+ ++ A + G +IH K + S+ N+ I +Y+K +L+ A + F++++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC--SKSGLVDE 462
FR+ I+W++MIS + +G EA+ + + P+ T SVL+A ++ V +
Sbjct: 435 -FREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQ 492
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G + L+ + + + + ++DM + G +D++ + M VW S+++A
Sbjct: 493 GQRCHAHLL-KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAY 550
Query: 523 VMHGNSMT 530
HG+ T
Sbjct: 551 SSHGDFET 558
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 174/339 (51%), Gaps = 22/339 (6%)
Query: 144 DLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
DL G I G S +N+VM MY + G F +A+ +F+ + +V S+N ++S
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 150
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
G+ F RM+ G DAFT ++ L C G G + G +L +V
Sbjct: 151 GF--------DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG-FLLGLQLQSTVV 201
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGA-P 322
K GL+ SD+ +G+S I MYSRS +RRVFD+M +++ W ++++G Q G
Sbjct: 202 KTGLE----SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
+A+++ R+M M++G+ + VS SV+ C L + +QIH K + N
Sbjct: 258 FEAVVIFRDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
L+ YSKCG L+ VF +S R+ ++W++MIS+ ++AV + M G+ P
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSE-RNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYP 370
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLI-TRYQMKPTV 480
+ +T V +++A + + EG+ I+ I T + +P+V
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 20/276 (7%)
Query: 183 AMKVFDEMPQRN-VGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE--GYNADAFTIA 239
A K+FD QRN S N IS SL ++ L F +Q G + D T+
Sbjct: 27 AHKLFDGSSQRNATTSINHSIS--ESLRR--NSPARALSIFKENLQLGYFGRHMDEVTLC 82
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
L C G + G ++H + +G S V + ++++ MY ++ + + +F+
Sbjct: 83 LALKACRGDLKR---GCQIHGFSTTSGFT----SFVCVSNAVMGMYRKAGRFDNALCIFE 135
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
+ ++ W +++G+ N + ++ ++ G+ + + + L C G +
Sbjct: 136 NLVDPDVVSWNTILSGFDDNQIALNFVVRMKSA----GVVFDAFTYSTALSFCVGSEGFL 191
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY 419
+G Q+ + K L D + N+ I MYS+ GS A RVFD +S F+D I+W+S++S
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLLSGL 250
Query: 420 GLHGR-GEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
G G EAVV ++ M++ G++ D ++ SV++ C
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 296/583 (50%), Gaps = 57/583 (9%)
Query: 75 LNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLAT 134
+NMS L + ++ ++N ++ + F L LF E+ R G + PD++TL
Sbjct: 1 MNMSLL-----QTPSLLMYNKMLKSLADGKSFTKVLALFGEL-RGQG---LYPDNFTLPV 51
Query: 135 ISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRN 194
+ K G L+ ++ G+ + G + +NS+M MY+ G+ KVFDEMPQR+
Sbjct: 52 VLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRD 111
Query: 195 VGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE-GYNADAFTIASLLPVCCGKTGKWD 253
V S+N +IS + G F G F+RM E D TI S L C +
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIG-----VFKRMSQESNLKFDEGTIVSTLSACSA-LKNLE 165
Query: 254 YGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMI 313
G ++ ++V + +M V +G++L+DM+ + L +R VFD M+ +N+ WT+M+
Sbjct: 166 IGERIYRFVVT---EFEMS--VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 314 NGYVQNGAPEDALILLREMQMKD------------------------------GMRPNKV 343
GYV G ++A +L +KD G+RP+
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
L+S+L CA G L GK IH + + + D + AL+DMY+KCG ++ A VF +
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
RD +W+S+I ++G A+ Y +M +G++ D IT V+VL+AC+ G V EG
Sbjct: 341 KE-RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS---VWGSLLT 520
I++S+ R+ ++P E C+C++D+L R+G LD+A E I M + + V+ SLL+
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
A+ +GN + L ++E + S + L++ YAS RW+ VT VR MK+ G++K
Sbjct: 460 AARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKF 519
Query: 581 PGISWITISGNTHSFAVGDK--AHPSSSLIYDMLDDLVAIMTD 621
PG S I I G H F VGD +HP I ML +M D
Sbjct: 520 PGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLD 562
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 200/427 (46%), Gaps = 40/427 (9%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ H + G + +++ L+ YA+ G + ++ VF + ++V WN LI+ YV N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
F A+ +F+ M S + + ++T+S S L++L G+ I +
Sbjct: 126 GRFEDAIGVFKRM--SQESNLKFDEGTIVSTLSACSA-LKNLEIGERIY-RFVVTEFEMS 181
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FASTSG 216
N+++ M+ +CG A VFD M +NV + M+ G+ S G F +
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPV 241
Query: 217 GD--LWC-----------------FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
D LW FR MQ G D F + SLL C +TG + G+
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLL-TGCAQTGALEQGKW 300
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H Y+ +N ++ D +G++L+DMY++ + + VF ++K R+ WT++I G
Sbjct: 301 IHGYINEN----RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLA 356
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI-HAFSTKVELNGD 376
NG AL L EM+ G+R + ++ ++VL AC G + G++I H+ + + +
Sbjct: 357 MNGMSGRALDLYYEME-NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAI---TWSSMISAYGLHGRGEEAVVTYQ 433
+ + LID+ + G LD A + D + D + S++SA +G + A +
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 434 KMLQLGI 440
K+ ++ +
Sbjct: 476 KLEKVEV 482
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 324/668 (48%), Gaps = 94/668 (14%)
Query: 30 LLQLTVDHRAHRLTQQ-CHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
LLQ +V+ R T Q H +++ +G + +L L++ Y+ +G +R +F + +
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 89 NVYLWNSLINGYVKNREFGHA------------------LVLFREMGRSHG-----GDCV 125
+ WN++++ Y K + +V ++ +G+ H GD V
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 126 L----PDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
P +TL + + + GK + +NS++ MY++CG+
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 182 DAMKVFDEMPQRNVGSFNVMIS------------------------GWASLGNFASTSGG 217
A VFD M R++ S+N MI+ W S+ + + G
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 218 DLWC---FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSD 274
DL F + ++ + D FT+AS+L C K G+++H ++V G D+ S
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSAC-ANLEKLCIGKQIHSHIVTTGFDI---SG 314
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQ---------------------------------M 301
+ L ++LI MYSR + +RR+ +Q +
Sbjct: 315 IVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
K R++ WTAMI GY Q+G+ +A+ L R M + G RPN +L ++L + L L G
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRPNSYTLAAMLSVASSLASLSHG 432
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
KQIH + K S+ NALI MY+K G++ ASR FD + RD ++W+SMI A
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
HG EEA+ ++ ML G++PD IT V V SAC+ +GLV++G ++ + ++ PT+
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLEL 541
AC+VD+ GR+G L +A EFI+ MP++P WGSLL+A +H N +A LL L
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLL 612
Query: 542 EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKA 601
EPEN Y +L+N Y++ +W+ ++R MK+ +KK G SWI + H F V D
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGT 672
Query: 602 HPSSSLIY 609
HP + IY
Sbjct: 673 HPEKNEIY 680
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 303/563 (53%), Gaps = 31/563 (5%)
Query: 33 LTVDHRAHRL--TQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEA--K 88
LT+ +A L TQQ HA+++ +GF L + L +AY S L+ + F+ I +
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 89 NVYLWNSLINGYVKNRE--FGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
N + WN++++GY K++ + L+L+ M R G D + L K L L
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDG----VDSFNLVFAIKACVGLGLLE 126
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
G LI G + A S++ MY++ G A KVFDE+P RN + V++ G+
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY- 185
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVC----CGKTGKWDYGRELHCYL 262
+ +++ F M+ G DA T+ L+ C GK GK +G +
Sbjct: 186 ----LKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
+ SD +L +S+IDMY + + L +R++F+ RN+ +WT +I+G+ +
Sbjct: 242 IDQ-------SD-YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
+A L R+M +++ + PN+ +L ++L +C+ LG L GK +H + + + D F +
Sbjct: 294 VEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTS 352
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
IDMY++CG++ A VFD + R+ I+WSSMI+A+G++G EEA+ + KM + P
Sbjct: 353 FIDMYARCGNIQMARTVFDMMPE-RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVP 411
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF 502
+ +T VS+LSACS SG V EG + S+ Y + P E AC+VD+LGR+G++ +A F
Sbjct: 412 NSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSF 471
Query: 503 IKGMPLDPGPSVWGSLLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKR 561
I MP+ P S WG+LL+A +H + ++A + LL +EPE S Y+ LSN YA
Sbjct: 472 IDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEK-LLSMEPEKSSVYVLLSNIYADAGM 530
Query: 562 WDVVTEVRTMMKERGLKKVPGIS 584
W++V VR M +G +K G S
Sbjct: 531 WEMVNCVRRKMGIKGYRKHVGQS 553
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 302/586 (51%), Gaps = 36/586 (6%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HA ++ + ++ T LV Y +G + VF + +N Y W+++++GY
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 104 REFGHALVLF----REMGRSHGGDCVLPDDYTLATISKVSGELQDLVY---GKLIPGKSX 156
A+ +F RE + G D DY + V L +Y G+ I +
Sbjct: 198 GRVEEAIKVFNLFLRE--KEEGSD----SDYVF---TAVLSSLAATIYVGLGRQIHCITI 248
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
+N+++ MYS+C +A K+FD RN +++ M++G++ G
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
F RM G +TI +L C + G++LH +L LK+G + H
Sbjct: 309 -----LFSRMFSAGIKPSEYTIVGVLNAC-SDICYLEEGKQLHSFL------LKLGFERH 356
Query: 277 L--GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
L ++L+DMY+++ L +R+ FD ++ R++ +WT++I+GYVQN E+ALIL R M+
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
G+ PN ++ SVL AC+ L L +GKQ+H + K + + +AL MYSKCGSL+
Sbjct: 417 A-GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
+ VF +D ++W++MIS +G+G+EA+ +++ML G++PD +T V+++SAC
Sbjct: 476 DGNLVFRRTPN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
S G V+ G +N + + + P V+ AC+VD+L R+GQL +A EFI+ +D G +
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 515 WGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKE 574
W LL+A HG A L+ L S Y+ LS Y + R V V M+
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 575 RGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMT 620
G+ K G SWI + H F VGD HP + + DLV +++
Sbjct: 655 NGVSKEVGCSWIELKNQYHVFVVGDTMHP----MIEETKDLVCLVS 696
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 241/481 (50%), Gaps = 20/481 (4%)
Query: 22 ITPHNLLELLQLTVDHRAHRLT--QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
+ PH L +LT + L + H QI+ G + LV+ YA G L +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHA---LVLFREMGRSHGGDCVLPDDYTLATIS 136
+F++I K+V WNSLI GY +N + + LFREM R+ +LP+ YTLA I
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQD---ILPNAYTLAGIF 125
Query: 137 KVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG 196
K LQ G+ S++ MY + G D +KVF MP+RN
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGR 256
+++ M+SG+A+ G ++ F R + EG ++D A L + T GR
Sbjct: 186 TWSTMVSGYATRGRVEEAI--KVFNLFLREKEEGSDSDYVFTAVLSSL--AATIYVGLGR 241
Query: 257 ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGY 316
++HC +KNGL +G V L ++L+ MYS+ + L + ++FD RN W+AM+ GY
Sbjct: 242 QIHCITIKNGL---LGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 317 VQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD 376
QNG +A+ L M G++P++ +++ VL AC+ + L GKQ+H+F K+
Sbjct: 298 SQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML 436
AL+DMY+K G L A + FD + RD W+S+IS Y + EEA++ Y++M
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQE-RDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
GI P+ T+ SVL ACS ++ G ++ I ++ V I + + M + G L
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGSL 474
Query: 497 D 497
+
Sbjct: 475 E 475
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 207/398 (52%), Gaps = 17/398 (4%)
Query: 143 QDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMI 202
++LV G+ + G+ AN ++ Y++CG+ A +F+ + ++V S+N +I
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 203 SGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYL 262
+G++ G +S+ + FR M+ + +A+T+A + GR+ H +
Sbjct: 88 TGYSQNGGISSSY--TVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS-TVGRQAHALV 144
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
VK + D+++ +SL+ MY ++ + +VF M RN Y W+ M++GY G
Sbjct: 145 VK----MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 323 EDAL----ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTS 378
E+A+ + LRE + +++S L A +G +G+QIH + K L G +
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG---LGRQIHCITIKNGLLGFVA 257
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
L NAL+ MYSKC SL+ A ++FD+ S R++ITWS+M++ Y +G EAV + +M
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQ 498
GIKP T+V VL+ACS ++EG ++ S + + + + +VDM ++G L
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLH-SFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 499 ALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYR 536
A + + + ++W SL++ V + ++ + YR
Sbjct: 376 ARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYR 412
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 16/399 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L +Q H + NG L+ LV+ Y+ LN + +F S +N W++++ GY
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+N E A+ LF M + + P +YT+ + ++ L GK +
Sbjct: 299 QNGESLEAVKLFSRMFSAG----IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
+++ MY++ G DA K FD + +R+V + +ISG+ ++ +
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQ-----NSDNEEALI 409
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
+RRM+ G + T+AS+L C + G+++H + +K+G L +V +GS+L
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKA-CSSLATLELGKQVHGHTIKHGFGL----EVPIGSAL 464
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
MYS+ L VF + ++++ W AMI+G NG ++AL L EM + +GM P+
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPD 523
Query: 342 KVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
V+ ++++ AC+ G + G + S ++ L+ + ++D+ S+ G L A
Sbjct: 524 DVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI 583
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
++ + W ++SA HG+ E V +K++ LG
Sbjct: 584 ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 14 YHTSATAFITPHN--LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYAT 71
Y TA I P++ + +L+ L +Q H + +GF + + L + Y+
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 72 SGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYT 131
G L LVF K+V WN++I+G N + AL LF EM + + PDD T
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM----LAEGMEPDDVT 526
Query: 132 LATI 135
I
Sbjct: 527 FVNI 530
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 259/454 (57%), Gaps = 17/454 (3%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N ++ MY + DA ++FD+MPQRNV S+ MIS ++ +L R
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK--IHQKALELLVLMLR- 155
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ + +T +S+L C G + R LHC ++K GL+ SDV + S+LID+++
Sbjct: 156 --DNVRPNVYTYSSVLRSCNGMSDV----RMLHCGIIKEGLE----SDVFVRSALIDVFA 205
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ + + VFD+M + + VW ++I G+ QN + AL L + M+ + G + +L
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK-RAGFIAEQATLT 264
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
SVL AC L L +G Q H K + D L NAL+DMY KCGSL+ A RVF+ +
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKE- 321
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
RD ITWS+MIS +G +EA+ +++M G KP+ IT+V VL ACS +GL+++G
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYY 381
Query: 467 YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ S+ Y + P E C++D+LG++G+LD A++ + M +P W +LL A +
Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQR 441
Query: 527 NSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWI 586
N + + A + ++ L+PE+ Y LSN YA+ ++WD V E+RT M++RG+KK PG SWI
Sbjct: 442 NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Query: 587 TISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMT 620
++ H+F +GD +HP + L+ L+ +T
Sbjct: 502 EVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 535
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 27/394 (6%)
Query: 29 ELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
EL++ + +RA + NG FL L++ Y LN + +F + +
Sbjct: 66 ELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR 125
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
NV W ++I+ Y K + AL L M R D V P+ YT +++ + + D+
Sbjct: 126 NVISWTTMISAYSKCKIHQKALELLVLMLR----DNVRPNVYTYSSVLRSCNGMSDV--- 178
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASL 208
+++ ++++ ++++ GE DA+ VFDEM + +N +I G
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG---- 234
Query: 209 GNFASTSGGDLWC-FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL 267
FA S D+ F+RM+ G+ A+ T+ S+L C G + G + H ++VK
Sbjct: 235 --FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG-LALLELGMQAHVHIVKYDQ 291
Query: 268 DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALI 327
DL L ++L+DMY + L + RVF+QMK R++ W+ MI+G QNG ++AL
Sbjct: 292 DLI------LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL---FNALI 384
L M+ G +PN ++++ VL AC+ G L G + F + +L G + + +I
Sbjct: 346 LFERMK-SSGTKPNYITIVGVLFACSHAGLLEDG--WYYFRSMKKLYGIDPVREHYGCMI 402
Query: 385 DMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
D+ K G LD A ++ + + DA+TW +++ A
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 296/561 (52%), Gaps = 21/561 (3%)
Query: 62 TTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHG 121
+RL+ + N++ L ++ +V+ WNS+I ++ + AL+ F M +
Sbjct: 13 VSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL-- 70
Query: 122 GDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
+ P + K L D+ GK ++ +++++ MYS CG+
Sbjct: 71 --SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQC-EGYNADAFTIAS 240
DA KVFDE+P+RN+ S+ MI G+ GN D F+ + E + DA + S
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGN-----ALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 241 LLPV----CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK--LVLS 294
+ V C + +H +++K G D V +G++L+D Y++ + + ++
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFD----RGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 295 RRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
R++FDQ+ ++ + ++++ Y Q+G +A + R + + N ++L +VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 355 LGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSS 414
G L +GK IH ++ L D + ++IDMY KCG ++ A + FD + ++ +W++
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN-KNVRSWTA 358
Query: 415 MISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRY 474
MI+ YG+HG +A+ + M+ G++P+ IT VSVL+ACS +GL EG +N++ R+
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLA 534
++P +E C+VD+LGR+G L +A + I+ M + P +W SLL A +H N +++
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEIS 478
Query: 535 YRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHS 594
L EL+ N Y+ LS+ YA RW V VR +MK RGL K PG S + ++G H
Sbjct: 479 VARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHV 538
Query: 595 FAVGDKAHPSSSLIYDMLDDL 615
F +GD+ HP IY+ L +L
Sbjct: 539 FLIGDEEHPQREKIYEFLAEL 559
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 199/400 (49%), Gaps = 15/400 (3%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H Q G+ + F+++ L+ Y+T G L +R VF I +N+ W S+I GY N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 104 REFGHALVLFREM--GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
A+ LF+++ + D + D L ++ + + I
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 162 XXXXXANSVMAMYSRCGEFGDAM--KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL 219
N+++ Y++ GE G A+ K+FD++ ++ S+N ++S +A G S
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG----MSNEAF 271
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
F R ++ + +A T++++L + +G G+ +H +++ GL+ DV +G+
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVL-LAVSHSGALRIGKCIHDQVIRMGLE----DDVIVGT 326
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
S+IDMY + ++ +R+ FD+MK++N+ WTAMI GY +G AL L M + G+R
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM-IDSGVR 385
Query: 340 PNKVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
PN ++ +SVL AC+ G + G + +A + + + ++D+ + G L A
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ + D+I WSS+++A +H E A ++ ++ +L
Sbjct: 446 LIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFEL 485
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGD--LNMSRLVFHSIEAKNVYLWNSL 96
A LT+ H+ ++ GF + + L+ AYA G+ + ++R +F I K+ +NS+
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 97 INGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSX 156
++ Y ++ A +FR + ++ V + TL+T+ L GK I +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKN---KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI 314
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
S++ MY +CG A K FD M +NV S+ MI+G+ G+ A
Sbjct: 315 RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 374
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVC 245
F M G + T S+L C
Sbjct: 375 -----LFPAMIDSGVRPNYITFVSVLAAC 398
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 210/685 (30%), Positives = 345/685 (50%), Gaps = 89/685 (12%)
Query: 1 MVLRKTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCH---------AQIL 51
++LR+ F L + T + T + ++ LQL +H++ L + C+ AQI+
Sbjct: 5 LLLRRGFRL----FGTECGSKTTKWDPVQSLQL--NHQSLVLLENCNSRNQFKQVLAQIM 58
Query: 52 TNGFAQNPFLTTRLV--SAYATSGDLNMSRLVFHSIEAK-NVYLWNSLINGYV--KNREF 106
+ F +RL+ SA +L++++L+F + NV+++N++I+ KN F
Sbjct: 59 RFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECF 118
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD--------LVYGKLIPGKSXXX 158
G L+ M R V PD T + K S L + +V G L G
Sbjct: 119 G----LYSSMIRHR----VSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGN---- 166
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
NS++ Y G FG A KVF MP +V SFNVMI G+A G S
Sbjct: 167 ------YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG----FSLEA 216
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
L +F+ M +G D +T+ SLL VCCG G+ +H ++ + G S++ L
Sbjct: 217 LKLYFK-MVSDGIEPDEYTVLSLL-VCCGHLSDIRLGKGVHGWIERRGP--VYSSNLILS 272
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG-----------APEDALI 327
++L+DMY + K+ L++R FD MK +++ W M+ G+V+ G P+ L+
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 328 ---------------------LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA 366
L EM + + ++P++V+++S++ A G L G+ +H
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 367 FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGE 426
+++L GD L +ALIDMY KCG ++ A VF + +D W+SMI+ HG G+
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE-KDVALWTSMITGLAFHGNGQ 451
Query: 427 EAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
+A+ + +M + G+ P+ +T+++VL+ACS SGLV+EG+ ++N + ++ P E +
Sbjct: 452 QALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSL 511
Query: 487 VDMLGRSGQLDQALEFI-KGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPEN 545
VD+L R+G++++A + + K MP+ P S+WGS+L+A + T +LA LL+LEPE
Sbjct: 512 VDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEK 571
Query: 546 PSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKA-HPS 604
Y+ LSN YA+ RW + R M+ RG+KK G S + H F +K HP
Sbjct: 572 EGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPR 631
Query: 605 SSLIYDMLDDLVAIMTDGCADMDIL 629
+ I +L L M +D+L
Sbjct: 632 WTEIKRILQHLYNEMKPKLDCLDLL 656
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/585 (31%), Positives = 301/585 (51%), Gaps = 22/585 (3%)
Query: 44 QQCHAQILTNGFAQNPF-LTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
++ H ++T G + LV+ YA G + +R VF+ + K+ WNS+I G +
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
N F A+ ++ M R +LP +TL + L+ G+ I G+S
Sbjct: 393 NGCFIEAVERYKSMRRHD----ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
+N++M +Y+ G + K+F MP+ + S+N +I A + S +
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR----SERSLPEAVVC 504
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F Q G + T +S+L + + G+++H +KN + + ++LI
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFG-ELGKQIHGLALKNNI----ADEATTENALI 559
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYV-WTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
Y + ++ ++F +M R V W +MI+GY+ N AL L+ M ++ G R +
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM-LQTGQRLD 618
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+VL A A + L G ++HA S + L D + +AL+DMYSKCG LDYA R F+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM-LQLGIKPDMITVVSVLSACSKSGLV 460
+ R++ +W+SMIS Y HG+GEEA+ ++ M L PD +T V VLSACS +GL+
Sbjct: 679 TMP-VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+EG + S+ Y + P +E +C+ D+LGR+G+LD+ +FI+ MP+ P +W ++L
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 521 ASVMHGNSMTRDL---AYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
A N +L A L +LEPEN NY+ L N YA+ RW+ + + R MK+ +
Sbjct: 798 ACC-RANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADV 856
Query: 578 KKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDG 622
KK G SW+T+ H F GDK+HP + +IY L +L M D
Sbjct: 857 KKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDA 901
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 243/506 (48%), Gaps = 34/506 (6%)
Query: 28 LELLQLTVDHR-AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
L +Q V HR A R H+++ N ++ +L L++AY +GD +R VF +
Sbjct: 7 LSFVQSCVGHRGAARFF---HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD-- 144
+N W +++GY +N E ALV R+M + + + + Y ++ + E+
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVK----EGIFSNQYAFVSVLRACQEIGSVG 119
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRC-GEFGDAMKVFDEMPQRNVGSFNVMIS 203
+++G+ I G +N +++MY +C G G A+ F ++ +N S+N +IS
Sbjct: 120 ILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIIS 179
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG-KWDYGRELHCYL 262
++ G+ S + F MQ +G +T SL+ C T ++ C +
Sbjct: 180 VYSQAGDQRSA-----FRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
K+GL +D+ +GS L+ +++S L +R+VF+QM++RN ++ G V+
Sbjct: 235 QKSGLL----TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG 290
Query: 323 EDALILLREMQMKDGMRPNK-VSLISVLPACALLG--GLIVGKQIHAFSTKVEL-NGDTS 378
E+A L +M + P V L+S P +L GL G+++H L +
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVG 350
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYF---RDAITWSSMISAYGLHGRGEEAVVTYQKM 435
+ N L++MY+KCGS+ A RVF YF +D+++W+SMI+ +G EAV Y+ M
Sbjct: 351 IGNGLVNMYAKCGSIADARRVF----YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 436 LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQ 495
+ I P T++S LS+C+ G I+ + + + V + ++ + +G
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGY 465
Query: 496 LDQALEFIKGMPLDPGPSVWGSLLTA 521
L++ + MP S W S++ A
Sbjct: 466 LNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 177/377 (46%), Gaps = 52/377 (13%)
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
S + C G G R H L KN LD DV+L ++LI+ Y + V +R+VFD
Sbjct: 8 SFVQSCVGHRGA---ARFFHSRLYKNRLD----KDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLG--G 357
+M RN W +++GY +NG ++AL+ LR+M +K+G+ N+ + +SVL AC +G G
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM-VKEGIFSNQYAFVSVLRACQEIGSVG 119
Query: 358 LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKC-GSLDYASRVFDNVSYFRDAITWSSMI 416
++ G+QIH K+ D + N LI MY KC GS+ YA F ++ +++++W+S+I
Sbjct: 120 ILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE-VKNSVSWNSII 178
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS-VLSACSKSGLVDEGMGIYNSLITRYQ 475
S Y G A + M G +P T S V +ACS L + + + ++ Q
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQ 235
Query: 476 ---MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV-----------WGSLLTA 521
+ + + + +V +SG L A + M ++ WG T
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
M NSM +++ PE +Y+ L +++ Y ++ +E GLKK
Sbjct: 296 LFMDMNSM---------IDVSPE---SYVILLSSFPEY----------SLAEEVGLKKGR 333
Query: 582 GISWITISGNTHSFAVG 598
+ I+ F VG
Sbjct: 334 EVHGHVITTGLVDFMVG 350
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 295/557 (52%), Gaps = 15/557 (2%)
Query: 60 FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRS 119
++ + L+ Y G + + +F +E ++ W+S+++G+ KN A+ FR M +
Sbjct: 97 YVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMA 156
Query: 120 HGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE 179
V PD TL T+ +L + G+ + G NS++ Y++
Sbjct: 157 SD---VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
F +A+ +F + +++V S++ +I+ + G + + F M +G + T+
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNG-----AAAEALLVFNDMMDDGTEPNVATVL 268
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
+L C + GR+ H ++ GL+ ++V + ++L+DMY + + VF
Sbjct: 269 CVLQACAA-AHDLEQGRKTHELAIRKGLE----TEVKVSTALVDMYMKCFSPEEAYAVFS 323
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
++ +++ W A+I+G+ NG ++ M +++ RP+ + ++ VL +C+ LG L
Sbjct: 324 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLE 383
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY 419
K H++ K + + + +L+++YS+CGSL AS+VF+ ++ +D + W+S+I+ Y
Sbjct: 384 QAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA-LKDTVVWTSLITGY 442
Query: 420 GLHGRGEEAVVTYQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
G+HG+G +A+ T+ M++ +KP+ +T +S+LSACS +GL+ EG+ I+ ++ Y++ P
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAP 502
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL 538
+E A +VD+LGR G LD A+E K MP P P + G+LL A +H N + + L
Sbjct: 503 NLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKL 562
Query: 539 LELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVG 598
ELE + Y+ +SN Y W+ V ++R +K+RG+KK S I I H F
Sbjct: 563 FELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVAD 622
Query: 599 DKAHPSSSLIYDMLDDL 615
D+ HP +Y +L +L
Sbjct: 623 DELHPEKEPVYGLLKEL 639
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 234/453 (51%), Gaps = 21/453 (4%)
Query: 78 SRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISK 137
+R +F + +++Y WN+L+ + +++ L F M R D PD++TL K
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR----DEEKPDNFTLPVALK 68
Query: 138 VSGELQDLVYGKLIPG-KSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG 196
GEL+++ YG++I G +S++ MY +CG +A+++FDE+ + ++
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRM-QCEGYNADAFTIASLLPVCCGKTGKWDYG 255
+++ M+SG+ G S FFRRM D T+ +L+ C K G
Sbjct: 129 TWSSMVSGFEKNG-----SPYQAVEFFRRMVMASDVTPDRVTLITLVSACT-KLSNSRLG 182
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
R +H ++++ G +D+ L +SL++ Y++S+ + +F + +++ W+ +I
Sbjct: 183 RCVHGFVIRRGF----SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIAC 238
Query: 316 YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG 375
YVQNGA +AL++ +M M DG PN +++ VL ACA L G++ H + + L
Sbjct: 239 YVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
+ + AL+DMY KC S + A VF + +D ++W ++IS + L+G ++ + M
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPR-KDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 436 -LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
L+ +PD I +V VL +CS+ G +++ ++S + +Y I A +V++ R G
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 495 QLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
L A + G+ L VW SL+T +HG
Sbjct: 416 SLGNASKVFNGIAL-KDTVVWTSLITGYGIHGK 447
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 200/368 (54%), Gaps = 21/368 (5%)
Query: 177 CGEFG---DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNA 233
C +F DA ++F EM +R++ +N ++ + + ++ F M +
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWE-----EVLYHFSHMFRDEEKP 58
Query: 234 DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL 293
D FT+ L C G+ + +YG +H ++ K D+ +GSD+++GSSLI MY + +++
Sbjct: 59 DNFTLPVALKAC-GELREVNYGEMIHGFVKK---DVTLGSDLYVGSSLIYMYIKCGRMIE 114
Query: 294 SRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
+ R+FD+++ ++ W++M++G+ +NG+P A+ R M M + P++V+LI+++ AC
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 354 LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
L +G+ +H F + + D SL N+L++ Y+K + A +F ++ +D I+WS
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-KDVISWS 233
Query: 414 SMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
++I+ Y +G EA++ + M+ G +P++ TV+ VL AC+ + +++G + L R
Sbjct: 234 TVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIR 292
Query: 474 YQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDL 533
++ V++ +VDM + ++A +P S W +L++ ++G +
Sbjct: 293 KGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNG------M 345
Query: 534 AYRCLLEL 541
A+R + E
Sbjct: 346 AHRSIEEF 353
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 192/421 (45%), Gaps = 18/421 (4%)
Query: 22 ITPH--NLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
+TP L+ L+ RL + H ++ GF+ + L L++ YA S +
Sbjct: 159 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV 218
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
+F I K+V W+++I YV+N AL++F +M D P+ T+ + +
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM----MDDGTEPNVATVLCVLQAC 274
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
DL G+ + + +++ MY +C +A VF +P+++V S+
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCE-GYNADAFTIASLLPVCCGKTGKWDYGREL 258
+ISG+ +L A S + F M E DA + +L C + G + +
Sbjct: 335 ALISGF-TLNGMAHRSIEE----FSIMLLENNTRPDAILMVKVLG-SCSELGFLEQAKCF 388
Query: 259 HCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQ 318
H Y++K G D S+ +G+SL+++YSR L + +VF+ + ++ VWT++I GY
Sbjct: 389 HSYVIKYGFD----SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 444
Query: 319 NGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK-VELNGDT 377
+G AL M ++PN+V+ +S+L AC+ G + G +I L +
Sbjct: 445 HGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNL 504
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
+ L+D+ + G LD A + + + +++ A +H GE A +K+ +
Sbjct: 505 EHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE 564
Query: 438 L 438
L
Sbjct: 565 L 565
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 245/453 (54%), Gaps = 43/453 (9%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A VFD + + +N+MI G++ S ++RM C +A+T SLL
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFS-----CSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD--- 299
C + ++ ++H + K G + +DV+ +SLI+ Y+ + L+ +FD
Sbjct: 123 KACSNLSA-FEETTQIHAQITKLGYE----NDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 300 ----------------------------QMKSRNLYVWTAMINGYVQNGAPEDALILLRE 331
+M +N WT MI+GYVQ ++AL L E
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCG 391
MQ D + P+ VSL + L ACA LG L GK IH++ K + D+ L LIDMY+KCG
Sbjct: 238 MQNSD-VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 392 SLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
++ A VF N+ + W+++IS Y HG G EA+ + +M ++GIKP++IT +VL
Sbjct: 297 EMEEALEVFKNIKK-KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 452 SACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG 511
+ACS +GLV+EG I+ S+ Y +KPT+E C+VD+LGR+G LD+A FI+ MPL P
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 512 PSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTM 571
+WG+LL A +H N + L+ ++P + Y+ +N +A K+WD E R +
Sbjct: 416 AVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRL 475
Query: 572 MKERGLKKVPGISWITISGNTHSFAVGDKAHPS 604
MKE+G+ KVPG S I++ G TH F GD++HP
Sbjct: 476 MKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPE 508
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 193/443 (43%), Gaps = 43/443 (9%)
Query: 18 ATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVS--AYATSGD- 74
+ +F HNL E + +Q HA++L G Q+ + T+ +S +TS D
Sbjct: 5 SCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 75 LNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLAT 134
L +++VF + + +LWN +I G+ + E +L+L++ M S + YT +
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH----NAYTFPS 120
Query: 135 ISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRN 194
+ K L I + NS++ Y+ G F A +FD +P+ +
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180
Query: 195 VGSFNVMISGWASLGNF---------ASTSGGDLWC-----------------FFRRMQC 228
S+N +I G+ G + W F MQ
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
D ++A+ L C + G + G+ +H YL K + + D LG LIDMY++
Sbjct: 241 SDVEPDNVSLANALSAC-AQLGALEQGKWIHSYLNKTRIRM----DSVLGCVLIDMYAKC 295
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
++ + VF +K +++ WTA+I+GY +G +A+ EMQ K G++PN ++ +V
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAV 354
Query: 349 LPACALLGGLIVGKQI-HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
L AC+ G + GK I ++ L + ++D+ + G LD A R +
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 408 DAITWSSMISAYGLHGR---GEE 427
+A+ W +++ A +H GEE
Sbjct: 415 NAVIWGALLKACRIHKNIELGEE 437
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/578 (30%), Positives = 301/578 (52%), Gaps = 26/578 (4%)
Query: 44 QQCHAQILTNG--FAQNPFLTTRLVSAYATSG-DLNMSRLVFHSIEAKNVYLWNSLIN-- 98
+Q H +LT+ + + +RL+ T+ +R + ++ ++ LW+SLI
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHF 77
Query: 99 --GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSX 156
G NR + + +R M R + V+P +T + K +L+D +
Sbjct: 78 SGGITLNRRL--SFLAYRHMRR----NGVIPSRHTFPPLLKAVFKLRDSNPFQF-HAHIV 130
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
NS+++ YS G F A ++FD ++V ++ MI G+ G S
Sbjct: 131 KFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG-----SA 185
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
+ +F M+ G A+ T+ S+L GK +GR +H ++ G ++ DV
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAA-GKVEDVRFGRSVHGLYLETG---RVKCDVF 241
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
+GSSL+DMY + +++VFD+M SRN+ WTA+I GYVQ+ + +++ EM +K
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM-LKS 300
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
+ PN+ +L SVL ACA +G L G+++H + K + +T+ LID+Y KCG L+ A
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK 456
VF+ + + ++ TW++MI+ + HG +A + ML + P+ +T ++VLSAC+
Sbjct: 361 ILVFERL-HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAH 419
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWG 516
GLV+EG ++ S+ R+ M+P + AC+VD+ GR G L++A I+ MP++P VWG
Sbjct: 420 GGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWG 479
Query: 517 SLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERG 576
+L + ++H + A +++L+P + Y L+N Y+ + WD V VR MK++
Sbjct: 480 ALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQ 539
Query: 577 LKKVPGISWITISGNTHSFAVGDKAHP-SSSLIYDMLD 613
+ K PG SWI + G F D P S +Y LD
Sbjct: 540 VVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLD 577
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 257/475 (54%), Gaps = 54/475 (11%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A K+F++MPQRN S+N +I G++ + L F+ M E + FT S+L
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITL--FYEMMSDEFVEPNRFTFPSVL 135
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY----------------- 285
C KTGK G+++H +K G G D + S+L+ MY
Sbjct: 136 KAC-AKTGKIQEGKQIHGLALKYGF----GGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 286 ------------SRSKKLVL----------------SRRVFDQMKSRNLYVWTAMINGYV 317
R ++VL +R +FD+M+ R++ W MI+GY
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
NG +DA+ + REM+ D +RPN V+L+SVLPA + LG L +G+ +H ++ + D
Sbjct: 251 LNGFFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
L +ALIDMYSKCG ++ A VF+ + + ITWS+MI+ + +HG+ +A+ + KM Q
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPR-ENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 438 LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
G++P + +++L+ACS GLV+EG ++ +++ ++P +E C+VD+LGRSG LD
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 498 QALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 557
+A EFI MP+ P +W +LL A M GN L+++ P + Y++LSN YA
Sbjct: 429 EAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 558 SYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
S W V+E+R MKE+ ++K PG S I I G H F V D +HP + I ML
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 196/443 (44%), Gaps = 70/443 (15%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSG----DLNMSRLVFHSIEAKNVYLW 93
R R Q HA + +G ++ ++ ATS DL+ + +F+ + +N + W
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSW 93
Query: 94 NSLINGYVKNREFGH--ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLI 151
N++I G+ ++ E A+ LF EM + V P+ +T ++ K + + GK I
Sbjct: 94 NTIIRGFSESDEDKALIAITLFYEM---MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 152 PGKSXXXXXXXXXXXANSVMAMYSRCGEFGD----------------------------- 182
G + ++++ MY CG D
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 183 ----------------AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
A +FD+M QR+V S+N MISG++ G F D FR M
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK-----DAVEVFREM 265
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ + T+ S+LP + G + G LH Y +G+ + D LGS+LIDMYS
Sbjct: 266 KKGDIRPNYVTLVSVLPA-ISRLGSLELGEWLHLYAEDSGIRI----DDVLGSALIDMYS 320
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ + + VF+++ N+ W+AMING+ +G DA+ +M+ + G+RP+ V+ I
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYI 379
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNV 403
++L AC+ G + G++ FS V ++G + ++D+ + G LD A N+
Sbjct: 380 NLLTACSHGGLVEEGRRY--FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 404 SYFRDAITWSSMISAYGLHGRGE 426
D + W +++ A + G E
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVE 460
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 146/325 (44%), Gaps = 62/325 (19%)
Query: 257 ELHCYLVKNGL--DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
++H +K+G D +++ + D++ R L + ++F+QM RN + W +I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 315 GYVQNGAPED--ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
G+ ++ + A+ L EM + + PN+ + SVL ACA G + GKQIH + K
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 373 LNGDT---------------------------------------------SLFNALIDMY 387
GD L+N +ID Y
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITV 447
+ G A +FD + R ++W++MIS Y L+G ++AV +++M + I+P+ +T+
Sbjct: 219 MRLGDCKAARMLFDKMRQ-RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 448 VSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI----CACVVDMLGRSGQLDQALEFI 503
VSVL A S+ G ++ G ++ Y + I + ++DM + G +++A+
Sbjct: 278 VSVLPAISRLGSLELGEWLH-----LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 504 KGMPLDPGPSVWGSLLTASVMHGNS 528
+ +P + W +++ +HG +
Sbjct: 333 ERLPRE-NVITWSAMINGFAIHGQA 356
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 183/596 (30%), Positives = 307/596 (51%), Gaps = 23/596 (3%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L +Q H ++ G+ N ++ + LV YA + + F I N WN+LI G+V
Sbjct: 119 LGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFV 178
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP---GKSXXX 158
+ R+ A L +G V D T A + + L D ++ L+ K
Sbjct: 179 QVRDIKTAFWL---LGLMEMKAAVTMDAGTFAPLLTL---LDDPMFCNLLKQVHAKVLKL 232
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP-QRNVGSFNVMISGWASLGNFASTSGG 217
N++++ Y+ CG DA +VFD + +++ S+N MI+G++ + S
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK--HELKESAF 290
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
+L F +MQ D +T LL C G+ + +G+ LH ++K GL+ + L
Sbjct: 291 EL---FIQMQRHWVETDIYTYTGLLSACSGEEHQI-FGKSLHGMVIKKGLEQVTSATNAL 346
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
S I + + + LS +F+ +KS++L W ++I G+ Q G EDA+ ++ +
Sbjct: 347 ISMYIQFPTGTMEDALS--LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE- 403
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
++ + + ++L +C+ L L +G+QIHA +TK + + ++LI MYSKCG ++ A
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+ F +S + W++MI Y HG G+ ++ + +M +K D +T ++L+ACS +
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
GL+ EG+ + N + Y+++P +E A VD+LGR+G +++A E I+ MPL+P P V +
Sbjct: 524 GLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKT 583
Query: 518 LLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
L G LLE+EPE+ Y+SLS+ Y+ K+W+ V+ MMKERG+
Sbjct: 584 FLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGV 643
Query: 578 KKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM----TDGCADMDIL 629
KKVPG SWI I +F D+++P IY M+ DL M +D D D L
Sbjct: 644 KKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWLDSDNGVDADSL 699
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 184/384 (47%), Gaps = 54/384 (14%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
+N ++ Y + G G A +FDEMP+R+ S+N MISG+ S G D WC F M
Sbjct: 38 SNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLE-----DAWCLFTCM 92
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ G + D ++ + LL ++D G ++H ++K G + +V++GSSL+DMY+
Sbjct: 93 KRSGSDVDGYSFSRLLK-GIASVKRFDLGEQVHGLVIKGGYE----CNVYVGSSLVDMYA 147
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ +++ + F ++ N W A+I G+VQ + A LL M+MK + + +
Sbjct: 148 KCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFA 207
Query: 347 SVLPA------CALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+L C LL KQ+HA K+ L + ++ NA+I Y+ CGS+ A RVF
Sbjct: 208 PLLTLLDDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS----- 455
D + +D I+W+SMI+ + H E A + +M + ++ D+ T +LSACS
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 456 -----------KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
K GL ++ N+LI+ Y PT G ++ AL +
Sbjct: 322 IFGKSLHGMVIKKGL-EQVTSATNALISMYIQFPT--------------GTMEDALSLFE 366
Query: 505 GMPLDPGPSVWGSLLTASVMHGNS 528
+ S W S++T G S
Sbjct: 367 SLKSKDLIS-WNSIITGFAQKGLS 389
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 222/488 (45%), Gaps = 29/488 (5%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H + G + +++ R++ +Y G L + ++F + ++ WN++I+GY +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
A LF M RS G D D Y+ + + K ++ G+ + G
Sbjct: 83 EDAWCLFTCMKRS-GSDV---DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
+S++ MY++C DA + F E+ + N S+N +I+G+ + + + W
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA----FWLLGLME 194
Query: 227 QCEGYNADAFTIASLL-----PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
DA T A LL P+ C + +++H ++K GL ++ + +++
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFC------NLLKQVHAKVLKLGLQ----HEITICNAM 244
Query: 282 IDMYSRSKKLVLSRRVFDQM-KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
I Y+ + ++RVFD + S++L W +MI G+ ++ E A L +MQ + +
Sbjct: 245 ISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ-RHWVET 303
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSK--CGSLDYASR 398
+ + +L AC+ I GK +H K L TS NALI MY + G+++ A
Sbjct: 304 DIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALS 363
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
+F+++ +D I+W+S+I+ + G E+AV + + IK D ++L +CS
Sbjct: 364 LFESLKS-KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 459 LVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSL 518
+ G I+ +L T+ + + ++ M + G ++ A + + + W ++
Sbjct: 423 TLQLGQQIH-ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 519 LTASVMHG 526
+ HG
Sbjct: 482 ILGYAQHG 489
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 25/428 (5%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI-EAK 88
LL L D L +Q HA++L G + ++S+YA G ++ ++ VF + +K
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTL-ATISKVSGELQDLVY 147
++ WNS+I G+ K+ A LF +M R V D YT +S SGE + ++
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHW----VETDIYTYTGLLSACSGE-EHQIF 323
Query: 148 GKLIPGKSXXXXXXXXXXXANSVMAMYSR--CGEFGDAMKVFDEMPQRNVGSFNVMISGW 205
GK + G N++++MY + G DA+ +F+ + +++ S+N +I+G+
Sbjct: 324 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 383
Query: 206 ASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKN 265
A G D FF ++ D + ++LL C G+++H K+
Sbjct: 384 AQKG-----LSEDAVKFFSYLRSSEIKVDDYAFSALLR-SCSDLATLQLGQQIHALATKS 437
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV-WTAMINGYVQNGAPED 324
G S+ + SSLI MYS+ + +R+ F Q+ S++ V W AMI GY Q+G +
Sbjct: 438 GF----VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV-ELNGDTSLFNAL 383
+L L +M ++ + V+ ++L AC+ G + G ++ V ++ + A
Sbjct: 494 SLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP- 442
+D+ + G ++ A + +++ D + + + G E A +L+ I+P
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE--IEPE 610
Query: 443 DMITVVSV 450
D T VS+
Sbjct: 611 DHFTYVSL 618
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 254/436 (58%), Gaps = 15/436 (3%)
Query: 183 AMKVFDEMPQR-NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG-YNADAFTIAS 240
A KVF ++ + NV +N +I G+A +GN S + +R M+ G D T
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISA-----FSLYREMRVSGLVEPDTHTYPF 126
Query: 241 LLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
L+ G +H ++++G GS +++ +SL+ +Y+ + + +VFD+
Sbjct: 127 LIKAVT-TMADVRLGETIHSVVIRSGF----GSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
M ++L W ++ING+ +NG PE+AL L EM K G++P+ +++S+L ACA +G L +
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTL 240
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
GK++H + KV L + N L+D+Y++CG ++ A +FD + +++++W+S+I
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLA 299
Query: 421 LHGRGEEAVVTYQKMLQL-GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
++G G+EA+ ++ M G+ P IT V +L ACS G+V EG + + Y+++P
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 480 VEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLL 539
+E C+VD+L R+GQ+ +A E+IK MP+ P +W +LL A +HG+S + A +L
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 540 ELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGD 599
+LEP + +Y+ LSN YAS +RW V ++R M G+KKVPG S + + H F +GD
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 600 KAHPSSSLIYDMLDDL 615
K+HP S IY L ++
Sbjct: 480 KSHPQSDAIYAKLKEM 495
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 180/360 (50%), Gaps = 15/360 (4%)
Query: 81 VFHSIEAK-NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
VF IE NV++WN+LI GY + A L+REM S V PD +T + K
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVS---GLVEPDTHTYPFLIKAV 131
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
+ D+ G+ I NS++ +Y+ CG+ A KVFD+MP++++ ++N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
+I+G+A G + + M +G D FTI SLL C K G G+ +H
Sbjct: 192 SVINGFAENGK-----PEEALALYTEMNSKGIKPDGFTIVSLLS-ACAKIGALTLGKRVH 245
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
Y++K GL ++H + L+D+Y+R ++ ++ +FD+M +N WT++I G N
Sbjct: 246 VYMIKVGLT----RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTS 378
G ++A+ L + M+ +G+ P +++ + +L AC+ G + G + + ++
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
F ++D+ ++ G + A ++ + + W +++ A +HG + A ++LQL
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
RL + H+ ++ +GF ++ L+ YA GD+ + VF + K++ WNS+ING+
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+N + AL L+ EM S G + PD +T+ ++ ++ L GK +
Sbjct: 198 AENGKPEEALALYTEMN-SKG---IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 253
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+N ++ +Y+RCG +A +FDEM +N S+ +I G A G G +
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG-----FGKEAI 308
Query: 221 CFFRRMQ-CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL--------DLKM 271
F+ M+ EG T +L C HC +VK G + K+
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACS------------HCGMVKEGFEYFRRMREEYKI 356
Query: 272 GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNG 320
+ ++D+ +R+ ++ ++ ++ +KS N+ +W ++ +G
Sbjct: 357 EPRIEHFGCMVDLLARAGQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 253/434 (58%), Gaps = 12/434 (2%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A +F+ M + ++ FN M G++ T+ +++ F + +G D +T SLL
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRF-----TNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
C + GR+LHC +K GLD +V++ +LI+MY+ + + +R VFD++
Sbjct: 137 KAC-AVAKALEEGRQLHCLSMKLGLD----DNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
+ + AMI GY + P +AL L REMQ K ++PN+++L+SVL +CALLG L +GK
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGK-YLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
IH ++ K + ALIDM++KCGSLD A +F+ + Y +D WS+MI AY H
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY-KDTQAWSAMIVAYANH 309
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI 482
G+ E++++ +++M ++PD IT + +L+ACS +G V+EG ++ +++++ + P+++
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 483 CACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELE 542
+VD+L R+G L+ A EFI +P+ P P +W LL A H N + + EL+
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
Query: 543 PENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAH 602
+ +Y+ LSN YA K+W+ V +R +MK+R KVPG S I ++ H F GD
Sbjct: 430 DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVK 489
Query: 603 PSSSLIYDMLDDLV 616
+++ ++ LD++V
Sbjct: 490 SATTKLHRALDEMV 503
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 173/369 (46%), Gaps = 16/369 (4%)
Query: 71 TSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDY 130
T ++ +R +F ++ ++ ++NS+ GY + LF E+ D +LPD+Y
Sbjct: 75 TESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE----DGILPDNY 130
Query: 131 TLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM 190
T ++ K + L G+ + S +++ MY+ C + A VFD +
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 191 PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG 250
+ V +N MI+G+A + FR MQ + + T+ S+L C G
Sbjct: 191 VEPCVVCYNAMITGYAR-----RNRPNEALSLFREMQGKYLKPNEITLLSVLS-SCALLG 244
Query: 251 KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
D G+ +H Y K+ V + ++LIDM+++ L + +F++M+ ++ W+
Sbjct: 245 SLDLGKWIHKYAKKHSF----CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA-FST 369
AMI Y +G E ++++ M+ + ++P++++ + +L AC+ G + G++ + +
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMR-SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVS 359
Query: 370 KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
K + + +++D+ S+ G+L+ A D + + W +++A H + A
Sbjct: 360 KFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAE 419
Query: 430 VTYQKMLQL 438
+++ +L
Sbjct: 420 KVSERIFEL 428
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 17/283 (6%)
Query: 22 ITPHN--LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
I P N LL+ +A +Q H + G N ++ L++ Y D++ +R
Sbjct: 125 ILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR 184
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
VF I V +N++I GY + AL LFREM G + P++ TL ++
Sbjct: 185 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM----QGKYLKPNEITLLSVLSSC 240
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
L L GK I + +++ M+++CG DA+ +F++M ++ +++
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
MI +A+ G + F RM+ E D T LL C TG+ + GR+
Sbjct: 301 AMIVAYANHGKAEKS-----MLMFERMRSENVQPDEITFLGLLNA-CSHTGRVEEGRKYF 354
Query: 260 CYLV-KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
+V K G+ + S H G S++D+ SR+ L + D++
Sbjct: 355 SQMVSKFGI---VPSIKHYG-SMVDLLSRAGNLEDAYEFIDKL 393
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 281/570 (49%), Gaps = 16/570 (2%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+ HA + + ++ + L+ Y G ++ S VF + +N W ++I G V
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ L F EM RS L D YT A K L+ + YGK I
Sbjct: 188 GRYKEGLTYFSEMSRSEE----LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
ANS+ MY+ CGE D + +F+ M +R+V S+ +I + +G F
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET-----F 298
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
+M+ + T AS+ C + +G +LHC N L L + + + +S++
Sbjct: 299 IKMRNSQVPPNEQTFASMFSAC-ASLSRLVWGEQLHC----NVLSLGLNDSLSVSNSMMK 353
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
MYS LV + +F M+ R++ W+ +I GY Q G E+ M+ + G +P
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGTKPTDF 412
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+L S+L + + G+Q+HA + L ++++ ++LI+MYSKCGS+ AS +F
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET 472
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
D ++ ++MI+ Y HG+ +EA+ ++K L++G +PD +T +SVL+AC+ SG +D G
Sbjct: 473 DR-DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
+N + Y M+P E C+VD+L R+G+L A + I M VW +LL A
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
G+ A +LEL+P + ++L+N Y+S + VR MK +G+ K PG
Sbjct: 592 AKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGW 651
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLD 613
S I I +F GD+ HP S IY++L+
Sbjct: 652 SSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 222/472 (47%), Gaps = 25/472 (5%)
Query: 28 LELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEA 87
+ LLQ V+ R++ Q + F N L + L++A G+L +R VF +
Sbjct: 19 ISLLQKPVEENIVRISNQVMVK-----FDPNSHLRS-LINA----GNLRAARQVFDKMPH 68
Query: 88 KNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVY 147
++ W S+I YV AL+LF M V PD L+ + K G+ ++ Y
Sbjct: 69 GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA--VSPDTSVLSVVLKACGQSSNIAY 126
Query: 148 GKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWAS 207
G+ + + +S++ MY R G+ + +VF EMP RN ++ +I+G
Sbjct: 127 GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVH 186
Query: 208 LGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL 267
G + + +F M +D +T A L C G + YG+ +H +++ G
Sbjct: 187 AGRYK-----EGLTYFSEMSRSEELSDTYTFAIALKACAG-LRQVKYGKAIHTHVIVRGF 240
Query: 268 DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALI 327
+ + + +SL MY+ ++ +F+ M R++ WT++I Y + G A+
Sbjct: 241 V----TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMY 387
+M+ + PN+ + S+ ACA L L+ G+Q+H + LN S+ N+++ MY
Sbjct: 297 TFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITV 447
S CG+L AS +F + RD I+WS++I Y G GEE + M Q G KP +
Sbjct: 356 STCGNLVSASVLFQGMR-CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414
Query: 448 VSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
S+LS +++ G ++ +L + ++ + + +++M + G + +A
Sbjct: 415 ASLLSVSGNMAVIEGGRQVH-ALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 291/575 (50%), Gaps = 64/575 (11%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
LVS Y +G+++ +R VF + +NV W +L+ GYV N + A LF +M
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM-------- 136
Query: 125 VLPDDYTLATISKVSGELQD-------LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRC 177
P+ ++ + G LQD +Y ++IP K S++ +
Sbjct: 137 --PEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDNIAR--------TSMIHGLCKE 185
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFT 237
G +A ++FDEM +R+V ++ M++G+ DA
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD---------------------DARK 224
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNG--------LDLKMGSDVHLGSSLIDMYSRSK 289
I ++P + + + L Y V+NG ++ V +++I +
Sbjct: 225 IFDVMP----EKTEVSWTSMLMGY-VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 290 KLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVL 349
++ +RRVFD MK RN W +I + +NG +AL L MQ K G+RP +LIS+L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ-KQGVRPTFPTLISIL 338
Query: 350 PACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDA 409
CA L L GKQ+HA + + + D + + L+ MY KCG L + +FD +D
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KDI 397
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKM-LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYN 468
I W+S+IS Y HG GEEA+ + +M L KP+ +T V+ LSACS +G+V+EG+ IY
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 469 SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
S+ + + +KP AC+VDMLGR+G+ ++A+E I M ++P +VWGSLL A H
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 529 MTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITI 588
+ + L+E+EPEN YI LSN YAS RW V E+R +MK R ++K PG SW +
Sbjct: 518 DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Query: 589 SGNTHSFAVGD-KAHPSSSLIYDMLDDLVAIMTDG 622
H+F G +HP I +LD+L ++ +
Sbjct: 578 ENKVHAFTRGGINSHPEQESILKILDELDGLLREA 612
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 188/385 (48%), Gaps = 31/385 (8%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
T ++ G ++ +R +F + ++V W +++ GY +N A +F
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD-------- 227
Query: 123 DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGEFG 181
V+P+ ++ S + G +Q+ G++ + A N++++ + GE
Sbjct: 228 --VMPEKTEVSWTSMLMGYVQN---GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIA 282
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF--FRRMQCEGYNADAFTIA 239
A +VFD M +RN S W ++ +G +L F MQ +G T+
Sbjct: 283 KARRVFDSMKERNDAS-------WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
S+L VC +G+++H LV+ D+ DV++ S L+ MY + +LV S+ +FD
Sbjct: 336 SILSVC-ASLASLHHGKQVHAQLVRCQFDV----DVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
+ S+++ +W ++I+GY +G E+AL + EM + +PN+V+ ++ L AC+ G +
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 360 VGKQIH-AFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
G +I+ + + + T+ + ++DM + G + A + D+++ DA W S++ A
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPD 443
H + + A +K+++ I+P+
Sbjct: 511 CRTHSQLDVAEFCAKKLIE--IEPE 533
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 192/482 (39%), Gaps = 129/482 (26%)
Query: 73 GDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTL 132
G ++ +R +F S ++K++ WNS++ GY N A LF EM PD +
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----------PDRNII 80
Query: 133 ATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQ 192
+ VSG Y + GE +A KVFD MP+
Sbjct: 81 SWNGLVSG---------------------------------YMKNGEIDEARKVFDLMPE 107
Query: 193 RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQC-----------EGYNADAFTIASL 241
RNV S+ ++ G+ G + W + + +G DA + +
Sbjct: 108 RNVVSWTALVKGYVHNGK-VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEM 166
Query: 242 LP-------------VCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
+P +C K G+ D RE+ D V ++++ Y ++
Sbjct: 167 IPDKDNIARTSMIHGLC--KEGRVDEAREI--------FDEMSERSVITWTTMVTGYGQN 216
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
++ +R++FD M + WT+M+ GYVQNG EDA L M +K
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP------------ 264
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRD 408
+ AC NA+I + G + A RVFD++ D
Sbjct: 265 VIAC----------------------------NAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 409 AITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYN 468
A +W ++I + +G EA+ + M + G++P T++S+LS C+ + G ++
Sbjct: 297 A-SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 469 SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS----VWGSLLTASVM 524
L+ R Q V + + ++ M + G+L ++ + D PS +W S+++
Sbjct: 356 QLV-RCQFDVDVYVASVLMTMYIKCGELVKS-----KLIFDRFPSKDIIMWNSIISGYAS 409
Query: 525 HG 526
HG
Sbjct: 410 HG 411
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 72/342 (21%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
AN + SR G+ +A K+FD +++ S+N M++G+ FA+ D F M
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-----FANLMPRDARKLFDEM 74
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
D I+ W NGL + Y
Sbjct: 75 ------PDRNIIS------------W------------NGL--------------VSGYM 90
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
++ ++ +R+VFD M RN+ WTA++ GYV NG + A L +M K NKVS
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK-----NKVSWT 145
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVEL--NGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
+L G + +I E+ + D ++I K G +D A +FD +S
Sbjct: 146 ------VMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
R ITW++M++ YG + R ++A +K+ + + ++ S+L ++G +++
Sbjct: 200 E-RSVITWTTMVTGYGQNNRVDDA----RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
++ + +KP + C ++ LG+ G++ +A M
Sbjct: 255 ELFEVM----PVKPVI-ACNAMISGLGQKGEIAKARRVFDSM 291
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 24/247 (9%)
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
I SR K+ +R++FD S+++ W +M+ GY N P DA L EM P+
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-------PD 76
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL--FNALIDMYSKCGSLDYASRV 399
+ +++ L+ G + +I +L + ++ + AL+ Y G +D A +
Sbjct: 77 R----NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F + ++ ++W+ M+ + GR ++A K+ ++ D I S++ K G
Sbjct: 133 FWKMPE-KNKVSWTVMLIGFLQDGRIDDAC----KLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
VDE I++ + R +V +V G++ ++D A + MP S W S+L
Sbjct: 188 VDEAREIFDEMSER-----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSML 241
Query: 520 TASVMHG 526
V +G
Sbjct: 242 MGYVQNG 248
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HAQ++ F + ++ + L++ Y G+L S+L+F +K++ +WNS+I+GY +
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYT-LATISKVS--GELQDLVYGKLIPGKSXXXXX 160
AL +F EM S P++ T +AT+S S G +++ + K+
Sbjct: 411 GLGEEALKVFCEMPLSGSTK---PNEVTFVATLSACSYAGMVEEGL--KIYESMESVFGV 465
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEM 190
++ M R G F +AM++ D M
Sbjct: 466 KPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 292/545 (53%), Gaps = 23/545 (4%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSG-DLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
Q HA ++ +G + + L+S Y G + +R VF K+ W S+++GYV
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+E AL +F EM S G D +++TL++ K EL ++ G+ G
Sbjct: 142 KEHVKALEVFVEM-VSFGLD---ANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWN 197
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
++++ +Y E DA +VFDEMP+ +V + ++S ++ + G F+
Sbjct: 198 HFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALG----LFY 253
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
+ +G D T ++L C G + G+E+H L+ NG+ GS+V + SSL+D
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTAC-GNLRRLKQGKEIHGKLITNGI----GSNVVVESSLLD 308
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
MY + + +R+VF+ M +N W+A++ GY QNG E A+ + REM+ KD
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD-----LY 363
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+VL ACA L + +GK+IH + G+ + +ALID+Y K G +D ASRV+ +
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
S R+ ITW++M+SA +GRGEEAV + M++ GIKPD I+ +++L+AC +G+VDEG
Sbjct: 424 S-IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL--TA 521
+ + Y +KP E +C++D+LGR+G ++A ++ S+WG LL A
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+ + + +A R ++ELEP+ +Y+ LSN Y + R +R +M RG+ K
Sbjct: 543 ANADASRVAERIAKR-MMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTV 601
Query: 582 GISWI 586
G SWI
Sbjct: 602 GQSWI 606
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 14/309 (4%)
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR-SKKLVLSRRV 297
ASLL C K + +G + H ++VK+GL+ +D ++G+SL+ +Y + + +RRV
Sbjct: 65 ASLLQTC-NKVFSFIHGIQFHAHVVKSGLE----TDRNVGNSLLSLYFKLGPGMRETRRV 119
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
FD ++ WT+M++GYV AL + EM + G+ N+ +L S + AC+ LG
Sbjct: 120 FDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM-VSFGLDANEFTLSSAVKACSELGE 178
Query: 358 LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMIS 417
+ +G+ H + + + L +Y A RVFD + D I W++++S
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE-PDVICWTAVLS 237
Query: 418 AYGLHGRGEEAVVTYQKMLQ-LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
A+ + EEA+ + M + G+ PD T +VL+AC + +G I+ LIT +
Sbjct: 238 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GI 296
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYR 536
V + + ++DM G+ G + +A + GM S W +LL +G + A
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVS-WSALLGGYCQNGE---HEKAIE 352
Query: 537 CLLELEPEN 545
E+E ++
Sbjct: 353 IFREMEEKD 361
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 33 LTVDHRAHRLTQ--QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNV 90
LT RL Q + H +++TNG N + + L+ Y G + +R VF+ + KN
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 91 YLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKL 150
W++L+ GY +N E A+ +FREM D Y T+ K L + GK
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEE--------KDLYCFGTVLKACAGLAAVRLGKE 383
Query: 151 IPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN 210
I G+ ++++ +Y + G A +V+ +M RN+ ++N M+S A G
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLK 270
G + FF M +G D + ++L CG TG D GR + K+ +K
Sbjct: 444 -----GEEAVSFFNDMVKKGIKPDYISFIAILTA-CGHTGMVDEGRNYFVLMAKS-YGIK 496
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRN 305
G++ + S +ID+ R+ + + ++ + RN
Sbjct: 497 PGTEHY--SCMIDLLGRAGLFEEAENLLERAECRN 529
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 302/568 (53%), Gaps = 36/568 (6%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDL-NMSRLVFHSIEAK 88
LL+L + R+ +Q Q++T ++ + ++V+ S D + S ++ HSI +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 89 -NVYLWNSLINGYV---KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD 144
+ + +N+L++ Y K R A F G S PD +T + K G+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-------PDMFTFPPVFKACGKFSG 121
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
+ GK I G NS++ Y CGE +A KVF EMP R+V S+ +I+G
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
+ G + F +M E A + V G+ G G+ +H
Sbjct: 182 FTRTGLYKEALDT-----FSKMDVEPNLATYVCVL----VSSGRVGCLSLGKGIH----- 227
Query: 265 NGLDLKMGSDVHL--GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
GL LK S + L G++LIDMY + ++L + RVF +++ ++ W +MI+G V
Sbjct: 228 -GLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERS 286
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
++A+ L MQ G++P+ L SVL ACA LG + G+ +H + + DT + A
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTA 346
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
++DMY+KCG ++ A +F+ + ++ TW++++ +HG G E++ +++M++LG KP
Sbjct: 347 IVDMYAKCGYIETALEIFNGIRS-KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP 405
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITR-YQMKPTVEICACVVDMLGRSGQLDQALE 501
+++T ++ L+AC +GLVDEG ++ + +R Y + P +E C++D+L R+G LD+ALE
Sbjct: 406 NLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALE 465
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL---LELEPENPSNYISLSNTYAS 558
+K MP+ P + G++L+A G M +L L L++E E+ Y+ LSN +A+
Sbjct: 466 LVKAMPVKPDVRICGAILSACKNRGTLM--ELPKEILDSFLDIEFEDSGVYVLLSNIFAA 523
Query: 559 YKRWDVVTEVRTMMKERGLKKVPGISWI 586
+RWD V +R +MK +G+ KVPG S+I
Sbjct: 524 NRRWDDVARIRRLMKVKGISKVPGSSYI 551
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 302/598 (50%), Gaps = 45/598 (7%)
Query: 43 TQQCHAQILTNGFAQNPFLTTRLVSAYATSGD---LNMSRLVFHSI--------EAKNVY 91
Q H +++ G +N LTTR+V A+A+S + +R VFH E ++ +
Sbjct: 28 VNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPF 87
Query: 92 LWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLI 151
LWN++I + ++ AL+L M + V D ++L+ + K L + G I
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLE----NGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 152 PGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNF 211
G N ++ +Y +CG G + ++FD MP+R+ S+N MI G+ G
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 212 ASTSGGDLWCFFRRMQCE------------GY--NADAFTIASLLPVCCGKTGKWDYGRE 257
S F M E GY +D IAS L + +
Sbjct: 204 VSARE-----LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSM 258
Query: 258 LHCYLVKNG--------LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVW 309
+ Y VK+G D+ DV +++ID Y++ + ++ +FDQM R++ +
Sbjct: 259 IDGY-VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
+M+ GYVQN +AL + +M+ + + P+ +L+ VLPA A LG L +H +
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 370 KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
+ + L ALIDMYSKCGS+ +A VF+ + + W++MI +HG GE A
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN-KSIDHWNAMIGGLAIHGLGESAF 436
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
++ +L +KPD IT V VL+ACS SGLV EG+ + + +++++P ++ C+VD+
Sbjct: 437 DMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDI 496
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
L RSG ++ A I+ MP++P +W + LTA H T +L + L+ NPS+Y
Sbjct: 497 LSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSY 556
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSL 607
+ LSN YAS+ W V VRTMMKER ++K+PG SWI + G H F V D SS+L
Sbjct: 557 VLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV-DSIEVSSTL 613
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 291/543 (53%), Gaps = 15/543 (2%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H+ + + FA + ++ T LV YA G+L M+ VF + +++ WN++I+G+ +
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL 185
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
+ LF +M R G + P+ T+ + G L GK + G
Sbjct: 186 TDVIGLFLDMRRIDG---LSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
++ +Y++ A +VFD ++N +++ MI G+ N G++ FF+ +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE--NEMIKEAGEV--FFQML 298
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ L+ + C + G GR +HCY VK G L D+ + +++I Y+
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL----DLTVQNTIISFYA 354
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ L + R F ++ +++ + ++I G V N PE++ L EM+ G+RP+ +L+
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR-TSGIRPDITTLL 413
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
VL AC+ L L G H + +TS+ NAL+DMY+KCG LD A RVFD + +
Sbjct: 414 GVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HK 472
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
RD ++W++M+ +G+HG G+EA+ + M + G+ PD +T++++LSACS SGLVDEG +
Sbjct: 473 RDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Query: 467 YNSLIT-RYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
+NS+ + + P ++ C+ D+L R+G LD+A +F+ MP +P V G+LL+A +
Sbjct: 533 FNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTY 592
Query: 526 GNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
N+ + + + L E + + LSNTY++ +RW+ +R + K+RGL K PG SW
Sbjct: 593 KNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSW 651
Query: 586 ITI 588
+ +
Sbjct: 652 VDV 654
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 159/300 (53%), Gaps = 17/300 (5%)
Query: 173 MYSRCGEFGDAMKVFDEMPQRNVG--SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG 230
+Y+ C E A VFDE+P + ++++MI +AS +FA + + +M G
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYAS-NDFAEKALD----LYYKMLNSG 98
Query: 231 YNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK 290
+T +L C G D G+ +H ++ N D +D+++ ++L+D Y++ +
Sbjct: 99 VRPTKYTYPFVLKACAGLRA-IDDGKLIHSHV--NCSDF--ATDMYVCTALVDFYAKCGE 153
Query: 291 LVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
L ++ +VFD+M R++ W AMI+G+ + D + L +M+ DG+ PN +++ + P
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAI 410
A G L GK +H + T++ + D + ++D+Y+K + YA RVFD + + ++ +
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFKKNEV 272
Query: 411 TWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS---VLSACSKSGLVDEGMGIY 467
TWS+MI Y + +EA + +ML + M+T V+ +L C++ G + G ++
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQML-VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVH 331
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 345 LISVLPACALLGGLIVGKQIHAFSTK--VELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+S+L C L++G+ IH K + L+ T L N L +Y+ C ++ A VFD
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 403 VSYFR-DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ + R + I W MI AY + E+A+ Y KML G++P T VL AC+ +D
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
+G I+ S + + +C +VD + G+L+ A++ MP W ++++
Sbjct: 121 DGKLIH-SHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISG 178
Query: 522 SVMH 525
+H
Sbjct: 179 FSLH 182
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 302/578 (52%), Gaps = 72/578 (12%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
+VS +A +G+L+++R +F+++ K+V NSL++GY+ N AL LF+E+ S
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS----- 184
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
D TL T+ K EL+ L GK I + +S++ +Y++CG+ A
Sbjct: 185 --ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSG---------GDLW--------------- 220
+ +++ + + S + +ISG+A+ G + G LW
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 221 --CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
F M+ E D+ T+A+++ C G G + G+++HC+ K GL D+ +
Sbjct: 303 ALVLFNEMRNET-REDSRTLAAVINACIG-LGFLETGKQMHCHACKFGLI----DDIVVA 356
Query: 279 SSLIDMYSR---------------SKKLVL----------------SRRVFDQMKSRNLY 307
S+L+DMYS+ S +L ++RVF+++++++L
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLI 416
Query: 308 VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF 367
W +M NG+ QNG + L +M D + ++VSL SV+ ACA + L +G+Q+ A
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLD-LPTDEVSLSSVISACASISSLELGEQVFAR 475
Query: 368 STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
+T V L+ D + ++LID+Y KCG +++ RVFD + D + W+SMIS Y +G+G E
Sbjct: 476 ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK-SDEVPWNSMISGYATNGQGFE 534
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVV 487
A+ ++KM GI+P IT + VL+AC+ GLV+EG ++ S+ + P E +C+V
Sbjct: 535 AIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMV 594
Query: 488 DMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPS 547
D+L R+G +++A+ ++ MP D S+W S+L V +G A ++ELEPEN
Sbjct: 595 DLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSV 654
Query: 548 NYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
Y+ LS +A+ W+ VR +M+E + K PG SW
Sbjct: 655 AYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/559 (23%), Positives = 243/559 (43%), Gaps = 118/559 (21%)
Query: 28 LELLQLTVDHRAHRLTQQCHAQILTNGFAQN-PFLTTRLVSAYATSGDLNMSRLVFHSIE 86
+ LLQ L +Q + +L GF + + L+ Y+ SG + ++R +F +
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
+N + WN++I GY+ + E G +L F M G Y+
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDG--------YSW-------------- 127
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
N V++ +++ GE A ++F+ MP+++V + N ++ G+
Sbjct: 128 ---------------------NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI 166
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
L +A + R + ++ADA T+ ++L C + G+++H ++ G
Sbjct: 167 -LNGYAEEA-------LRLFKELNFSADAITLTTVLKA-CAELEALKCGKQIHAQILIGG 217
Query: 267 L------------------DLKMGS---------DVHLGSSLIDMYSRSKKLVLSRRVFD 299
+ DL+M S D H S+LI Y+ ++ SR +FD
Sbjct: 218 VECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFD 277
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
+ +R + +W +MI+GY+ N +AL+L E M++ R + +L +V+ AC LG L
Sbjct: 278 RKSNRCVILWNSMISGYIANNMKMEALVLFNE--MRNETREDSRTLAAVINACIGLGFLE 335
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS--------------------------- 392
GKQ+H + K L D + + L+DMYSKCGS
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 393 ----LDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVV 448
+D A RVF+ + + I+W+SM + + +G E + + +M +L + D +++
Sbjct: 396 SCGRIDDAKRVFERIEN-KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLS 454
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM-P 507
SV+SAC+ ++ G ++ + T + + + ++D+ + G ++ M
Sbjct: 455 SVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 508 LDPGPSVWGSLLTASVMHG 526
D P W S+++ +G
Sbjct: 514 SDEVP--WNSMISGYATNG 530
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 16/265 (6%)
Query: 58 NPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMG 117
+ L ++ Y + G ++ ++ VF IE K++ WNS+ NG+ +N L F +M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM- 441
Query: 118 RSHGGDCVLP-DDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
H D LP D+ +L+++ + L G+ + ++ ++S++ +Y +
Sbjct: 442 --HKLD--LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCK 497
Query: 177 CGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAF 236
CG +VFD M + + +N MISG+A+ G G + F++M G
Sbjct: 498 CGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ-----GFEAIDLFKKMSVAGIRPTQI 552
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
T +L C G + GR+L +D D S ++D+ +R+ + +
Sbjct: 553 TFMVVLTA-CNYCGLVEEGRKL---FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 297 VFDQMK-SRNLYVWTAMINGYVQNG 320
+ ++M + +W++++ G V NG
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANG 633
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 187/661 (28%), Positives = 302/661 (45%), Gaps = 115/661 (17%)
Query: 63 TRLVSA----YATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGR 118
TR+VSA Y L + +F + ++ WN ++ +++ + A+ LFREM
Sbjct: 23 TRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQF 82
Query: 119 SHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCG 178
S D T+ + +V + G+ I G NS++ MYSR G
Sbjct: 83 SGAK----AYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNG 138
Query: 179 EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG---------------------- 216
+ + KVF+ M RN+ S+N ++S + LG G
Sbjct: 139 KLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS 198
Query: 217 --------GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD 268
D +RMQ G +I+SLL + G G+ +H Y+++N
Sbjct: 199 GYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA-VAEPGHLKLGKAIHGYILRN--- 254
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMI--------------- 313
++ DV++ ++LIDMY ++ L +R VFD M ++N+ W +++
Sbjct: 255 -QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEAL 313
Query: 314 --------------------NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
+GY G PE AL ++ +M+ K G+ PN VS ++ C+
Sbjct: 314 MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAIFSGCS 372
Query: 354 --------------------------------LLGGLIV---GKQIHAFSTKVELNGDTS 378
+LG L + GK++H F + L D
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ AL+DMY K G L A +F + + +W+ M+ Y + GRGEE + + ML+
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKN-KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEA 491
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQ 498
G++PD IT SVLS C SGLV EG ++ + +RY + PT+E C+C+VD+LGRSG LD+
Sbjct: 492 GMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Query: 499 ALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYAS 558
A +FI+ M L P ++WG+ L++ +H + ++A++ L LEP N +NY+ + N Y++
Sbjct: 552 AWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSN 611
Query: 559 YKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAI 618
RW+ V +R +M+ ++ SWI I H F K HP IY L LV+
Sbjct: 612 LNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSE 671
Query: 619 M 619
M
Sbjct: 672 M 672
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 177/381 (46%), Gaps = 66/381 (17%)
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
G +H L+K GLD SD + S+ + Y R L + ++FD+M R+ W ++
Sbjct: 6 GLTIHGGLIKRGLD---NSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
+++G E A+ L REMQ G + +++ +L C+ G G+QIH + ++ L
Sbjct: 63 VNLRSGNWEKAVELFREMQF-SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVS------------------YFRDAI------ 410
+ S+ N+LI MYS+ G L+ + +VF+++ Y DAI
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 411 ----------TWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
TW+S++S Y G ++A+ ++M G+KP ++ S+L A ++ G +
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
G I+ I R Q+ V + ++DM ++G L A V+ +
Sbjct: 242 KLGKAIH-GYILRNQLWYDVYVETTLIDMYIKTGYLPYA------------RMVFDMMDA 288
Query: 521 ASVMHGNSMTRDLAYRCLLE--------LEPE----NPSNYISLSNTYASYKRWDVVTEV 568
+++ NS+ L+Y CLL+ +E E + + SL++ YA+ + + +V
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 569 RTMMKERGLKKVPG-ISWITI 588
MKE+G+ P +SW I
Sbjct: 349 IGKMKEKGV--APNVVSWTAI 367
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 181/411 (44%), Gaps = 55/411 (13%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
LLQ + +L + H IL N + ++ T L+ Y +G L +R+VF ++AKN
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 90 VYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK 149
+ WNSL++G +A C+L D L + G D +
Sbjct: 291 IVAWNSLVSG------LSYA--------------CLLKDAEALMIRMEKEGIKPDAI--- 327
Query: 150 LIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGW 205
NS+ + Y+ G+ A+ V +M ++ NV S+ + SG
Sbjct: 328 ----------------TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 206 ASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKN 265
+ GNF + F +MQ EG +A T+++LL + G G+E+H + ++
Sbjct: 372 SKNGNFRNALK-----VFIKMQEEGVGPNAATMSTLLKI-LGCLSLLHSGKEVHGFCLRK 425
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
L D ++ ++L+DMY +S L + +F +K+++L W M+ GY G E+
Sbjct: 426 NLI----CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTSLFNALI 384
+ M ++ GM P+ ++ SVL C G + G K ++ + + ++
Sbjct: 482 IAAFSVM-LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMV 540
Query: 385 DMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
D+ + G LD A +S DA W + +S+ +H E A + ++++
Sbjct: 541 DLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 591
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 190/659 (28%), Positives = 307/659 (46%), Gaps = 99/659 (15%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK---- 102
H + + +G + +LV+ Y+ SG L +R VF + +NVY WN++I YVK
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 103 --NREF---------------------------GHALVLFREMGRSHGGDCVLPDDYTLA 133
RE A+ +F EM R D + DD+T+
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD-IWIDDFTVT 129
Query: 134 TISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR 193
T+ K+S +L ++ YG+ + G +S++ MYS+CG+F + +F+
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 194 NVGSF--NVMISGWASLGNFASTSGGDLWCFFRRMQCE----------GYNADAFTIASL 241
V S N MI+ + G+ L F+R + GY + + +L
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKA----LSVFWRNPELNDTISWNTLIAGYAQNGYEEEAL 245
Query: 242 -LPVCCGKTG-KWD------------------YGRELHCYLVKNGL-------------- 267
+ V + G KWD G+E+H ++KNG
Sbjct: 246 KMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVY 305
Query: 268 ----DLKMGSDVHL---------GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
++K HL SS+I YS K+V ++R+FD + +NL VWTAM
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFL 365
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
GY+ P+ L L R + P+ + ++SVL AC+L + GK+IH S + +
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
D L A +DMYSKCG+++YA R+FD+ S+ RD + +++MI+ HG ++ ++
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFED 484
Query: 435 MLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
M + G KPD IT +++LSAC GLV EG + S+I Y + P C++D+ G++
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAY 544
Query: 495 QLDQALEFIKGM-PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLS 553
+LD+A+E ++G+ ++ + G+ L A + N+ LL +E N S YI ++
Sbjct: 545 RLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIA 604
Query: 554 NTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
N YAS RWD + +R M+ + L+ G SW I H F D +H + IY ML
Sbjct: 605 NAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 24 PHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNM------ 77
H+ +L + ++ ++ ++ HA++L NG N F+++ +V Y G++
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 78 -------------------------SRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVL 112
++ +F S+ KN+ +W ++ GY+ R+ L L
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 113 FREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMA 172
R + PD + ++ + GK I G S + +
Sbjct: 380 ARAF---IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVD 436
Query: 173 MYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN 232
MYS+CG A ++FD +R+ +N MI+G A G+ A + + F M G+
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKS-----FQHFEDMTEGGFK 491
Query: 233 ADAFTIASLLPVC 245
D T +LL C
Sbjct: 492 PDEITFMALLSAC 504
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 293/580 (50%), Gaps = 31/580 (5%)
Query: 17 SATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLN 76
S ++P L+ L+L + H +TNGF N L L+ Y GD+
Sbjct: 5 SENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVK 64
Query: 77 MSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATIS 136
+R +F I ++V W ++I+ + + AL+LF+EM R V + +T ++
Sbjct: 65 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED----VKANQFTYGSVL 120
Query: 137 KVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG 196
K +L L G I G ++++++Y+RCG+ +A FD M +R++
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLP----VCCGKTGKW 252
S+N MI G+ A+ + F+ M EG D FT SLL V C
Sbjct: 181 SWNAMIDGYT-----ANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC-----L 230
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM 312
+ ELH +K G G L SL++ Y + L + ++ + K R+L TA+
Sbjct: 231 EIVSELHGLAIKLGF----GRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTAL 286
Query: 313 INGYVQ-NGAPEDALILLREM-QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
I G+ Q N DA + ++M +MK M ++V + S+L C + + +G+QIH F+ K
Sbjct: 287 ITGFSQQNNCTSDAFDIFKDMIRMKTKM--DEVVVSSMLKICTTIASVTIGRQIHGFALK 344
Query: 371 V-ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
++ D +L N+LIDMY+K G ++ A F+ + +D +W+S+I+ YG HG E+A+
Sbjct: 345 SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE-KDVRSWTSLIAGYGRHGNFEKAI 403
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
Y +M IKP+ +T +S+LSACS +G + G IY+++I ++ ++ E +C++DM
Sbjct: 404 DLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDM 463
Query: 490 LGRSGQLDQALEFIKGMP--LDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPS 547
L RSG L++A I+ + S WG+ L A HGN +A LL +EP P
Sbjct: 464 LARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPV 523
Query: 548 NYISLSNTYASYKRWDVVTEVRTMMKERG-LKKVPGISWI 586
NYI+L++ YA+ WD R +MKE G K PG S +
Sbjct: 524 NYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/590 (31%), Positives = 290/590 (49%), Gaps = 69/590 (11%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
+VS Y ++G +R +F + +NV WN L++GY+KNR A +F
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFE---------- 103
Query: 125 VLPDDYTLATISKVSGELQD----------------------LVYGKLIP-GKSXXXXXX 161
++P+ ++ + V G +Q+ +++G LI G+
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKL 163
Query: 162 XXXXXANSVMAMYS------RCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS 215
V+A + R G +A +FDEM +RNV ++ MI+G+
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKT--GKWDYGRELHCYLVKNGLDLKMGS 273
F M + T S + G T G+ + E ++
Sbjct: 224 K-----LFEVMPEK-------TEVSWTSMLLGYTLSGRIEDAEEF--------FEVMPMK 263
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ 333
V +++I + ++ +RRVFD M+ R+ W MI Y + G +AL L +MQ
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
K G+RP+ SLIS+L CA L L G+Q+HA + + + D + + L+ MY KCG L
Sbjct: 324 -KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
A VFD S +D I W+S+IS Y HG GEEA+ + +M G P+ +T++++L+A
Sbjct: 383 VKAKLVFDRFSS-KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS 513
CS +G ++EG+ I+ S+ +++ + PTVE +C VDMLGR+GQ+D+A+E I+ M + P +
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 514 VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMK 573
VWG+LL A H ++A + L E EP+N Y+ LS+ AS +W V VR M+
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMR 561
Query: 574 ERGLKKVPGISWITISGNTHSFAVGD-KAHPSSSLIYDMLDDLVAIMTDG 622
+ K PG SWI + H F G K HP ++I ML+ TDG
Sbjct: 562 TNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEK-----TDG 606
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 196/403 (48%), Gaps = 38/403 (9%)
Query: 62 TTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHG 121
+T ++ G ++ +RL+F + +NV W ++I GY +N A LF
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE------- 227
Query: 122 GDCVLPDDYTLATIS-----KVSGELQDLV-YGKLIPGKSXXXXXXXXXXXANSVMAMYS 175
V+P+ ++ S +SG ++D + +++P K N+++ +
Sbjct: 228 ---VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA--------CNAMIVGFG 276
Query: 176 RCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADA 235
GE A +VFD M R+ ++ MI + G DL F +MQ +G
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKG--FELEALDL---FAQMQKQGVRPSF 331
Query: 236 FTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSR 295
++ S+L VC YGR++H +LV+ D DV++ S L+ MY + +LV ++
Sbjct: 332 PSLISILSVC-ATLASLQYGRQVHAHLVRCQFD----DDVYVASVLMTMYVKCGELVKAK 386
Query: 296 RVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
VFD+ S+++ +W ++I+GY +G E+AL + EM G PNKV+LI++L AC+
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYA 445
Query: 356 GGLIVGKQI-HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSS 414
G L G +I + +K + ++ +DM + G +D A + ++++ DA W +
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGA 505
Query: 415 MISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
++ A H R + A V +K+ + +PD +LS+ + S
Sbjct: 506 LLGACKTHSRLDLAEVAAKKLFE--NEPDNAGTYVLLSSINAS 546
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 44/257 (17%)
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
I SR K+ +R+ FD ++ + + W ++++GY NG P++A L EM ++
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN----- 78
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL--FNALIDMYSKCGSLDYASRV 399
V+ L+ G I + I EL + ++ + A++ Y + G + A +
Sbjct: 79 ------VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESL 132
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F + R+ ++W+ M GR ++A +K+ + D++ +++ + G
Sbjct: 133 FWRMPE-RNEVSWTVMFGGLIDDGRIDKA----RKLYDMMPVKDVVASTNMIGGLCREGR 187
Query: 460 VDEGMGIYN-----------SLITRYQMKPTVEICACVVDMLGR---------------S 493
VDE I++ ++IT Y+ V++ + +++ S
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 494 GQLDQALEFIKGMPLDP 510
G+++ A EF + MP+ P
Sbjct: 248 GRIEDAEEFFEVMPMKP 264
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 26 NLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI 85
+L+ +L + + + +Q HA ++ F + ++ + L++ Y G+L ++LVF
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 86 EAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI 135
+K++ +WNS+I+GY + AL +F EM S +P+ TL I
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG----TMPNKVTLIAI 438
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 224/362 (61%), Gaps = 7/362 (1%)
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
G +H ++++G GS +++ +SL+ +Y+ + + +VFD+M ++L W ++IN
Sbjct: 7 GETIHSVVIRSGF----GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
G+ +NG PE+AL L EM K G++P+ +++S+L ACA +G L +GK++H + KV L
Sbjct: 63 GFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
+ N L+D+Y++CG ++ A +FD + +++++W+S+I ++G G+EA+ ++
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 435 MLQL-GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRS 493
M G+ P IT V +L ACS G+V EG + + Y+++P +E C+VD+L R+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 494 GQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLS 553
GQ+ +A E+IK MP+ P +W +LL A +HG+S + A +L+LEP + +Y+ LS
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 554 NTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLD 613
N YAS +RW V ++R M G+KKVPG S + + H F +GDK+HP S IY L
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 614 DL 615
++
Sbjct: 361 EM 362
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
RL + H+ ++ +GF ++ L+ YA GD+ + VF + K++ WNS+ING+
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+N + AL L+ EM S G + PD +T+ ++ ++ L GK +
Sbjct: 65 AENGKPEEALALYTEMN-SKG---IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+N ++ +Y+RCG +A +FDEM +N S+ +I G A G G +
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG-----FGKEAI 175
Query: 221 CFFRRMQ-CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL--------DLKM 271
F+ M+ EG T +L C HC +VK G + K+
Sbjct: 176 ELFKYMESTEGLLPCEITFVGILYACS------------HCGMVKEGFEYFRRMREEYKI 223
Query: 272 GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNG 320
+ ++D+ +R+ ++ ++ ++ +KS N+ +W ++ +G
Sbjct: 224 EPRIEHFGCMVDLLARAGQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY 419
+G+ IH+ + + N+L+ +Y+ CG + A +VFD + +D + W+S+I+ +
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGF 64
Query: 420 GLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
+G+ EEA+ Y +M GIKPD T+VS+LSAC+K G + G ++ +I + +
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTRN 123
Query: 480 VEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ ++D+ R G++++A M +D W SL+ ++G
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 279/565 (49%), Gaps = 17/565 (3%)
Query: 57 QNP--FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFR 114
+NP L ++ Y L + +F + N ++I+ Y + A+ LF
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 115 EMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMY 174
M S GD P T+ K + L +G+ I ++ MY
Sbjct: 174 GMLAS--GD--KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 175 SRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNAD 234
+CG A +VFD+M + + ++ G+ G D F + EG D
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR-----ARDALKLFVDLVTEGVEWD 284
Query: 235 AFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
+F + +L C + + G+++H + K GL+ S+V +G+ L+D Y + +
Sbjct: 285 SFVFSVVLKAC-ASLEELNLGKQIHACVAKLGLE----SEVSVGTPLVDFYIKCSSFESA 339
Query: 295 RRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
R F +++ N W+A+I+GY Q E+A+ + ++ K+ N + S+ AC++
Sbjct: 340 CRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSV 399
Query: 355 LGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSS 414
L +G Q+HA + K L G +ALI MYSKCG LD A+ VF+++ D + W++
Sbjct: 400 LADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN-PDIVAWTA 458
Query: 415 MISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRY 474
IS + +G EA+ ++KM+ G+KP+ +T ++VL+ACS +GLV++G ++++ +Y
Sbjct: 459 FISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKY 518
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLA 534
+ PT++ C++D+ RSG LD+AL+F+K MP +P W L+ H N ++A
Sbjct: 519 NVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIA 578
Query: 535 YRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHS 594
L +L+PE+ + Y+ N Y +W+ E+ +M ER LKK SWI G H
Sbjct: 579 GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHR 638
Query: 595 FAVGDKAHPSSSLIYDMLDDLVAIM 619
F VGDK HP + IY+ L + M
Sbjct: 639 FIVGDKHHPQTQEIYEKLKEFDGFM 663
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 195/428 (45%), Gaps = 19/428 (4%)
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
K+R+ A +EM ++ V Y+ + + EL+ L +G+L+ +
Sbjct: 60 KHRKLNEAFEFLQEMDKAG----VSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIEN 115
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N V+ MY C DA K+FDEM + N S MIS +A G G
Sbjct: 116 PSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG----- 170
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F M G + +LL D+GR++H ++++ GL S+ + + +
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRA-LDFGRQIHAHVIRAGL----CSNTSIETGI 225
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
++MY + LV ++RVFDQM + T ++ GY Q G DAL L ++ + +G+ +
Sbjct: 226 VNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEWD 284
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
VL ACA L L +GKQIHA K+ L + S+ L+D Y KC S + A R F
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP-DMITVVSVLSACSKSGLV 460
+ D ++WS++IS Y + EEAV T++ + + T S+ ACS
Sbjct: 345 EIREPND-VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+ G ++ I R + A ++ M + G LD A E + M +P W + ++
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESA-LITMYSKCGCLDDANEVFESMD-NPDIVAWTAFIS 461
Query: 521 ASVMHGNS 528
+GN+
Sbjct: 462 GHAYYGNA 469
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 12/247 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L +Q HA + G + T LV Y + F I N W+++I+GY
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+ +F A+ F+ + RS + + +T +I + L D G + +
Sbjct: 363 QMSQFEEAVKTFKSL-RSKNAS--ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
++++ MYS+CG DA +VF+ M ++ ++ ISG A GN +
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN-----ASEALR 474
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F +M G ++ T ++L C G + G+ HC L + + +
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTA-CSHAGLVEQGK--HC-LDTMLRKYNVAPTIDHYDCM 530
Query: 282 IDMYSRS 288
ID+Y+RS
Sbjct: 531 IDIYARS 537
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 292/578 (50%), Gaps = 24/578 (4%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
R+ + H QI F + L L++ Y+ GDL S +F I KN W ++I+ Y
Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+ AL F EM +S + P+ TL ++ G + + GK + G +
Sbjct: 279 NRGEFSEKALRSFSEMIKSG----IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 161 XXXXXXAN-SVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL 219
+ +++ +Y+ CG+ D V + RN+ ++N +IS +A G G
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG--- 391
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
FR+M + DAFT+AS + C G G+++H ++++ + SD + +
Sbjct: 392 --LFRQMVTQRIKPDAFTLASSISAC-ENAGLVPLGKQIHGHVIRTDV-----SDEFVQN 443
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
SLIDMYS+S + + VF+Q+K R++ W +M+ G+ QNG +A+ L M +
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM-YHSYLE 502
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN--ALIDMYSKCGSLDYAS 397
N+V+ ++V+ AC+ +G L GK +H K+ ++G LF ALIDMY+KCG L+ A
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHH---KLIISGLKDLFTDTALIDMYAKCGDLNAAE 559
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
VF +S SSMI+AYG+HGR A+ T+ +M++ G KP+ + ++VLSAC S
Sbjct: 560 TVFRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
G V+EG +N L+ + + P E AC +D+L RSG L +A IK MP SVWGS
Sbjct: 619 GSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 518 LLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
L+ +H L ++ ++ Y LSN YA W+ +R+ MK L
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 578 KKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
KKVPG S I I F G++ + IY L +L
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 246/512 (48%), Gaps = 34/512 (6%)
Query: 41 RLTQQCHAQILTNG-FAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
RL Q HA +L G ++P T+L+ +YA G + SRLVF + + +++ LI
Sbjct: 15 RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKC 74
Query: 100 YVKNREFGHALVLFREM--GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXX 157
V A+ L+ + + V P + + +G + L G + G+
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFP-----SVLRACAGSREHLSVGGKVHGRIIK 129
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
S++ MY + G DA KVFD MP R++ +++ ++S + G
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS--------SCLENG 181
Query: 218 DLWCFFRRMQC---EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSD 274
++ R +C +G DA T+ S++ C + G R +H + + DL D
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVE-GCAELGCLRIARSVHGQITRKMFDL----D 236
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
L +SL+ MYS+ L+ S R+F+++ +N WTAMI+ Y + E AL EM +
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-I 295
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD-TSLFNALIDMYSKCGSL 393
K G+ PN V+L SVL +C L+G + GK +H F+ + EL+ + SL AL+++Y++CG L
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL 355
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
V VS R+ + W+S+IS Y G +A+ +++M+ IKPD T+ S +SA
Sbjct: 356 SDCETVLRVVSD-RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS 513
C +GLV G I+ +I V+ ++DM +SG +D A +
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQ--NSLIDMYSKSGSVDSASTVFNQIK-HRSVV 471
Query: 514 VWGSLLTASVMHGNSMTR----DLAYRCLLEL 541
W S+L +GNS+ D Y LE+
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 247/496 (49%), Gaps = 21/496 (4%)
Query: 14 YH--TSATAFITPHNLLELLQLTVDHRAH-RLTQQCHAQILTNGFAQNPFLTTRLVSAYA 70
YH S T I+ +L+ R H + + H +I+ G + + T L+ Y
Sbjct: 88 YHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYG 147
Query: 71 TSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDY 130
+G+L+ + VF + +++ W++L++ ++N E AL +F+ M D V PD
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV----DDGVEPDAV 203
Query: 131 TLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM 190
T+ ++ + EL L + + G+ NS++ MYS+CG+ + ++F+++
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 191 PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG 250
++N S+ MIS + + G F+ + F M G + T+ S+L CG G
Sbjct: 264 AKKNAVSWTAMISSY-NRGEFSEKALRS----FSEMIKSGIEPNLVTLYSVLS-SCGLIG 317
Query: 251 KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
G+ +H + V+ LD S L +L+++Y+ KL V + RN+ W
Sbjct: 318 LIREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
++I+ Y G AL L R+M + ++P+ +L S + AC G + +GKQIH +
Sbjct: 375 SLISLYAHRGMVIQALGLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
+++ D + N+LIDMYSK GS+D AS VF+ + + R +TW+SM+ + +G EA+
Sbjct: 434 TDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKH-RSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
+ M ++ + +T ++V+ ACS G +++G +++ LI +K A ++DM
Sbjct: 492 LFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS-GLKDLFTDTA-LIDMY 549
Query: 491 GRSGQLDQALEFIKGM 506
+ G L+ A + M
Sbjct: 550 AKCGDLNAAETVFRAM 565
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 293/545 (53%), Gaps = 34/545 (6%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H + G + + T L+S Y+ G+L ++ +F +IE ++V W+++I Y + +
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
A+ LFR+M R H + P+ TL ++ + + GK I +
Sbjct: 383 DEAISLFRDMMRIH----IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
A +V++MY++CG F A+K F+ +P ++ +FN + G+ +G+ + D+ ++ M
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD--ANKAFDV---YKNM 493
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY--LVKNGLDLKMGSDVHLGSSLIDM 284
+ G D+ T+ +L C + DY R Y ++K+G D S+ H+ +LI+M
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCS---DYARGSCVYGQIIKHGFD----SECHVAHALINM 546
Query: 285 YSRSKKLVLSRRVFDQMK-SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+++ L + +FD+ ++ W M+NGY+ +G E+A+ R+M++ + +PN V
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKV-EKFQPNAV 605
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ ++++ A A L L VG +H+ + T + N+L+DMY+KCG ++ + + F +
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI 665
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
S + ++W++M+SAY HG AV + M + +KPD ++ +SVLSAC +GLV+EG
Sbjct: 666 SN-KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEG 724
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
I+ + R++++ VE AC+VD+LG++G +A+E ++ M + VWG+LL +S
Sbjct: 725 KRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSR 784
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGI 583
MH N + A L++LEP NPS+ Y+ +R V V +KKVP
Sbjct: 785 MHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKVPAC 831
Query: 584 SWITI 588
SWI +
Sbjct: 832 SWIEV 836
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 234/485 (48%), Gaps = 22/485 (4%)
Query: 24 PHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFH 83
P N LL + + + R Q H ++ +G + +L++AY+ ++SR++F
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFD 57
Query: 84 SIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQ 143
S+ V LWNS+I GY + AL F M G D PD Y+ K
Sbjct: 58 SVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGID---PDKYSFTFALKACAGSM 114
Query: 144 DLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
D G I +++ MY + + A +VFD+M ++V ++N M+S
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
G A G +S L F M+ + D ++ +L+P K K D R LH
Sbjct: 175 GLAQNG---CSSAALL--LFHDMRSCCVDIDHVSLYNLIPAV-SKLEKSDVCRCLH---- 224
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
GL +K G S LIDMY L + VF+++ ++ W M+ Y NG E
Sbjct: 225 --GLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
+ L L M+ D +R NKV+ S L A A +G L+ G IH ++ + L GD S+ +L
Sbjct: 283 EVLELFDLMRNYD-VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
+ MYSKCG L+ A ++F N+ RD ++WS+MI++Y G+ +EA+ ++ M+++ IKP+
Sbjct: 342 MSMYSKCGELEIAEQLFINIED-RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
+T+ SVL C+ G I+ I + ++ +E V+ M + G+ AL+
Sbjct: 401 AVTLTSVLQGCAGVAASRLGKSIHCYAI-KADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 504 KGMPL 508
+ +P+
Sbjct: 460 ERLPI 464
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 179/405 (44%), Gaps = 19/405 (4%)
Query: 22 ITPH--NLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
I P+ L +LQ A RL + H + T ++S YA G + +
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
F + K+ +N+L GY + + A +++ M + HG V PD T+ + +
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM-KLHG---VCPDSRTMVGMLQTC 512
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP-QRNVGSF 198
D G + G+ A++++ M+++C A+ +FD+ +++ S+
Sbjct: 513 AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 199 NVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGREL 258
N+M++G+ G FR+M+ E + +A T +++ + G +
Sbjct: 573 NIMMNGYLLHGQAEEAVAT-----FRQMKVEKFQPNAVTFVNIVRA-AAELSALRVGMSV 626
Query: 259 HCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQ 318
H L++ G S +G+SL+DMY++ + S + F ++ ++ + W M++ Y
Sbjct: 627 HSSLIQCGF----CSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA 682
Query: 319 NGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI-HAFSTKVELNGDT 377
+G A+ L MQ ++ ++P+ VS +SVL AC G + GK+I + ++ +
Sbjct: 683 HGLASCAVSLFLSMQ-ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEV 741
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
+ ++D+ K G A + + W +++++ +H
Sbjct: 742 EHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 255/478 (53%), Gaps = 47/478 (9%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A VF + NV + MI G+ S G A D + RM D + I S+L
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSA-----DGVSLYHRMIHNSVLPDNYVITSVL 134
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
C K RE+H ++K G GS +G ++++Y +S +LV ++++FD+M
Sbjct: 135 KACDLKVC-----REIHAQVLKLGF----GSSRSVGLKMMEIYGKSGELVNAKKMFDEMP 185
Query: 303 SR---------NLY----------------------VWTAMINGYVQNGAPEDALILLRE 331
R N Y WTAMI+G V+N AL L RE
Sbjct: 186 DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFRE 245
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCG 391
MQM++ + N+ + + VL AC+ LG L +G+ +H+F + + NALI+MYS+CG
Sbjct: 246 MQMEN-VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCG 304
Query: 392 SLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
++ A RVF V +D I++++MIS +HG EA+ ++ M+ G +P+ +T+V++L
Sbjct: 305 DINEARRVF-RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALL 363
Query: 452 SACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG 511
+ACS GL+D G+ ++NS+ + ++P +E C+VD+LGR G+L++A FI+ +P++P
Sbjct: 364 NACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPD 423
Query: 512 PSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTM 571
+ G+LL+A +HGN + + L E E + Y+ LSN YAS +W TE+R
Sbjct: 424 HIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRES 483
Query: 572 MKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDGCADMDIL 629
M++ G++K PG S I + H F VGD AHP IY L +L I+ +DI+
Sbjct: 484 MRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQIDII 541
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 210/452 (46%), Gaps = 44/452 (9%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HA+I+ Q+ F+ L+ +T ++ + VF + NVYL+ ++I+G+V +
Sbjct: 49 HAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRS 108
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISK---------VSGELQDL------------ 145
+ L+ M + VLPD+Y + ++ K + ++ L
Sbjct: 109 ADGVSLYHRMIH----NSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKM 164
Query: 146 --VYGK---LIPGKSXXXXXXXXXXXANSVMA-MYSRCGEFGDAMKVFDEMPQRNVGSFN 199
+YGK L+ K A +VM YS CG +A+++F ++ ++ +
Sbjct: 165 MEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWT 224
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
MI G N +L FR MQ E +A+ FT +L C G + GR +H
Sbjct: 225 AMIDGLVR--NKEMNKALEL---FREMQMENVSANEFTAVCVLSA-CSDLGALELGRWVH 278
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
++ ++L +G++LI+MYSR + +RRVF M+ +++ + MI+G +
Sbjct: 279 SFVENQRMELSN----FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMH 334
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV-ELNGDTS 378
GA +A+ R+M + G RPN+V+L+++L AC+ G L +G ++ +V +
Sbjct: 335 GASVEAINEFRDM-VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIE 393
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ ++D+ + G L+ A R +N+ D I +++SA +HG E +++ +
Sbjct: 394 HYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE- 452
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSL 470
PD T V + + + SG E I S+
Sbjct: 453 SENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+ +LISVL +C + + IHA + + D + LI + S S+DYA VF
Sbjct: 29 RKTLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
VS + +++MI + GR + V Y +M+ + PD + SVL AC +
Sbjct: 86 YVSN-PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE 144
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP 507
++ + + + + ++++ G+SG+L A + MP
Sbjct: 145 -----IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMP 185
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/612 (28%), Positives = 313/612 (51%), Gaps = 54/612 (8%)
Query: 5 KTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTR 64
+TF+L RY + + F+ ++ LL V QQ HA +++G + L +
Sbjct: 67 RTFSLL--RYQSGSHEFVL-YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
LV+ Y+ L+ ++ + + E + WN LI Y++N+ F ++ +++ M S G
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM-MSKG--- 179
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
+ D++T ++ K L D YG+++ G N++++MY R G+ A
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
++FD M +R+ S+N +I+ + S G+ + RM G A T ++
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKL-----GEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 245 C----------------------------------CGKTGKWDYGRELHCYLVKNGLDLK 270
C C G +G+ HC ++++
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS---CS 351
Query: 271 MGSDV-HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILL 329
D+ ++ +SLI MYSR L + VF Q+++ +L W ++I+G+ N E+ LL
Sbjct: 352 FSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLL 411
Query: 330 REMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT-SLFNALIDMYS 388
+EM + G PN ++L S+LP A +G L GK+ H + + + D L+N+L+DMY+
Sbjct: 412 KEMLL-SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 389 KCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVV 448
K G + A RVFD++ RD +T++S+I YG G+GE A+ ++ M + GIKPD +T+V
Sbjct: 471 KSGEIIAAKRVFDSMRK-RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMV 529
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL 508
+VLSACS S LV EG ++ + + ++ +E +C+VD+ R+G LD+A + +P
Sbjct: 530 AVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPY 589
Query: 509 DPGPSVWGSLLTASVMHGNSMTRDLAY-RCLLELEPENPSNYISLSNTYASYKRWDVVTE 567
+P ++ +LL A ++HGN+ + A + LLE +PE+ +Y+ L++ YA W +
Sbjct: 590 EPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVT 649
Query: 568 VRTMMKERGLKK 579
V+T++ + G++K
Sbjct: 650 VKTLLSDLGVQK 661
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/612 (28%), Positives = 313/612 (51%), Gaps = 54/612 (8%)
Query: 5 KTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTR 64
+TF+L RY + + F+ ++ LL V QQ HA +++G + L +
Sbjct: 67 RTFSLL--RYQSGSHEFVL-YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
LV+ Y+ L+ ++ + + E + WN LI Y++N+ F ++ +++ M S G
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM-MSKG--- 179
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
+ D++T ++ K L D YG+++ G N++++MY R G+ A
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
++FD M +R+ S+N +I+ + S G+ + RM G A T ++
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKL-----GEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 245 C----------------------------------CGKTGKWDYGRELHCYLVKNGLDLK 270
C C G +G+ HC ++++
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS---CS 351
Query: 271 MGSDV-HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILL 329
D+ ++ +SLI MYSR L + VF Q+++ +L W ++I+G+ N E+ LL
Sbjct: 352 FSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLL 411
Query: 330 REMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT-SLFNALIDMYS 388
+EM + G PN ++L S+LP A +G L GK+ H + + + D L+N+L+DMY+
Sbjct: 412 KEMLL-SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 389 KCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVV 448
K G + A RVFD++ RD +T++S+I YG G+GE A+ ++ M + GIKPD +T+V
Sbjct: 471 KSGEIIAAKRVFDSMRK-RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMV 529
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL 508
+VLSACS S LV EG ++ + + ++ +E +C+VD+ R+G LD+A + +P
Sbjct: 530 AVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPY 589
Query: 509 DPGPSVWGSLLTASVMHGNSMTRDLAY-RCLLELEPENPSNYISLSNTYASYKRWDVVTE 567
+P ++ +LL A ++HGN+ + A + LLE +PE+ +Y+ L++ YA W +
Sbjct: 590 EPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVT 649
Query: 568 VRTMMKERGLKK 579
V+T++ + G++K
Sbjct: 650 VKTLLSDLGVQK 661
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 259/483 (53%), Gaps = 36/483 (7%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N++++ Y + G A VFD MP+R+V S+N M+ G+A GN LW F++ +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA----LW-FYKEFR 171
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELH---------------CYLV--------- 263
G + F+ A LL C K+ + R+ H C ++
Sbjct: 172 RSGIKFNEFSFAGLLTACV-KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 264 ---KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG 320
K D D+H+ ++LI Y++ + + ++F +M +N WTA+I GYV+ G
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
+ AL L R+M + G++P + + S L A A + L GK+IH + + + + +
Sbjct: 291 SGNRALDLFRKM-IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
++LIDMYSK GSL+ + RVF D + W++MISA HG G +A+ M++ +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
+P+ T+V +L+ACS SGLV+EG+ + S+ ++ + P E AC++D+LGR+G + +
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 501 EFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYK 560
I+ MP +P +W ++L +HGN A L++L+PE+ + YI LS+ YA +
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 561 RWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGD--KAHPSSSLIYDMLDDLVAI 618
+W++V ++R +MK+R + K +SWI I +F V D AH IY +L +L A+
Sbjct: 530 KWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAV 589
Query: 619 MTD 621
+ +
Sbjct: 590 IEE 592
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 214/484 (44%), Gaps = 46/484 (9%)
Query: 15 HTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGD 74
H T F P+ LL + + + + C ++ +N + +VS Y SG
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDAC--KVFDQMHLRNLYSWNNMVSGYVKSGM 128
Query: 75 LNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLAT 134
L +R+VF S+ ++V WN+++ GY ++ AL ++E RS + ++++ A
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSG----IKFNEFSFAG 184
Query: 135 ISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRN 194
+ + + L + G+ + S++ Y++CG+ A + FDEM ++
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 195 VGSFNVMISGWASLGNFAST--------------------------SGGDLWCFFRRMQC 228
+ + +ISG+A LG+ + SG FR+M
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
G + FT +S L +G+E+H Y+++ + + + SSLIDMYS+S
Sbjct: 305 LGVKPEQFTFSSCL-CASASIASLRHGKEIHGYMIRTNVR----PNAIVISSLIDMYSKS 359
Query: 289 KKLVLSRRVFDQMKSRNLYV-WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
L S RVF ++ V W MI+ Q+G AL +L +M +K ++PN+ +L+
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM-IKFRVQPNRTTLVV 418
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNVS 404
+L AC+ G +V + + F + +G D + LID+ + G R + +
Sbjct: 419 ILNACSHSG--LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDM--ITVVSVLSACSKSGLVDE 462
+ D W++++ +HG E ++++L + I + S+ + K LV++
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 463 GMGI 466
G+
Sbjct: 537 LRGV 540
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 151/350 (43%), Gaps = 67/350 (19%)
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRV 297
+ASLL C G T G+ +H +L G + L + LI MY + K + + +V
Sbjct: 49 LASLLQQC-GDTKSLKQGKWIHRHLKITGFK---RPNTLLSNHLIGMYMKCGKPIDACKV 104
Query: 298 FDQMKSRNLYVWTAMINGYVQNG-----------APE--------------------DAL 326
FDQM RNLY W M++GYV++G PE +AL
Sbjct: 105 FDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEAL 164
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
+E + + G++ N+ S +L AC L + +Q H + L ++ID
Sbjct: 165 WFYKEFR-RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 387 YSKCGSLDYASRVFDNVSYF------------------------------RDAITWSSMI 416
Y+KCG ++ A R FD ++ ++ ++W+++I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
+ Y G G A+ ++KM+ LG+KP+ T S L A + + G I+ +I R +
Sbjct: 284 AGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI-RTNV 342
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+P + + ++DM +SG L+ + + W ++++A HG
Sbjct: 343 RPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 235/418 (56%), Gaps = 11/418 (2%)
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
FN MI G+ ++ +F + CF+ M G D FT LL C + G++
Sbjct: 100 FNTMIRGYVNVMSFE-----EALCFYNEMMQRGNEPDNFTYPCLLKAC-TRLKSIREGKQ 153
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H + K GL+ +DV + +SLI+MY R ++ LS VF++++S+ W++M++
Sbjct: 154 IHGQVFKLGLE----ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
G + L+L R M + ++ + ++S L ACA G L +G IH F + +
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
+ +L+DMY KCG LD A +F + R+ +T+S+MIS LHG GE A+ + KM++
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEK-RNNLTYSAMISGLALHGEGESALRMFSKMIK 328
Query: 438 LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
G++PD + VSVL+ACS SGLV EG ++ ++ +++PT E C+VD+LGR+G L+
Sbjct: 329 EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLE 388
Query: 498 QALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 557
+ALE I+ +P++ +W + L+ + N +A + LL+L NP +Y+ +SN Y+
Sbjct: 389 EALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYS 448
Query: 558 SYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
+ WD V RT + +GLK+ PG S + + G TH F D++HP IY ML +
Sbjct: 449 QGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 182/368 (49%), Gaps = 21/368 (5%)
Query: 75 LNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLAT 134
+N + +F I+ + +N++I GYV F AL + EM + G + PD++T
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNE---PDNFTYPC 137
Query: 135 ISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRN 194
+ K L+ + GK I G+ NS++ MY RCGE + VF+++ +
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 195 VGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE-GYNADAFTIASLLPVCCGKTGKWD 253
S++ M+S A +G ++ + FR M E A+ + S L + C TG +
Sbjct: 198 AASWSSMVSARAGMGMWS-----ECLLLFRGMCSETNLKAEESGMVSAL-LACANTGALN 251
Query: 254 YGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMI 313
G +H +L++N +L ++ + +SL+DMY + L + +F +M+ RN ++AMI
Sbjct: 252 LGMSIHGFLLRNISEL----NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMI 307
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA---FSTK 370
+G +G E AL + +M +K+G+ P+ V +SVL AC+ G + G+++ A K
Sbjct: 308 SGLALHGEGESALRMFSKM-IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGK 366
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
VE + + L+D+ + G L+ A ++ ++ + W + +S + E +
Sbjct: 367 VEPTAEH--YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQI 424
Query: 431 TYQKMLQL 438
Q++L+L
Sbjct: 425 AAQELLKL 432
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 143/375 (38%), Gaps = 24/375 (6%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
LL+ ++ R +Q H Q+ G + F+ L++ Y G++ +S VF +E+K
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 90 VYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK 149
W+S+++ + L+LFR M + ++ + + L G
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETN---LKAEESGMVSALLACANTGALNLGM 254
Query: 150 LIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG 209
I G S++ MY +CG A+ +F +M +RN +++ MISG A G
Sbjct: 255 SIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG 314
Query: 210 NFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL 269
G F +M EG D S+L C +G GR + ++K G
Sbjct: 315 -----EGESALRMFSKMIKEGLEPDHVVYVSVLNA-CSHSGLVKEGRRVFAEMLKEG--- 365
Query: 270 KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK-SRNLYVWTAMINGYVQNGAPEDALIL 328
K+ L+D+ R+ L + + +N +W ++ E I
Sbjct: 366 KVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIA 425
Query: 329 LREMQMKDGMRPNKVSLISVLPACALLGGLIVG----------KQIHAFSTKVELNGDTS 378
+E+ P LIS L + + + KQ FS VEL G T
Sbjct: 426 AQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI-VELKGKTH 484
Query: 379 LFNALIDMYSKCGSL 393
F + + KC +
Sbjct: 485 RFVSQDRSHPKCKEI 499
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 262/481 (54%), Gaps = 34/481 (7%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FASTSGGDLW 220
N ++ MY++CG DA KVFDEMP R++ S+NVM++G+A +G F + D +
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 221 C-------FFRRMQCE-------------GYNADAFTIASLLPVCCGKTGKWDYGRELHC 260
+ ++ Q E + FT+ S+ G+E+H
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV-SIAVAAAAAVKCIRRGKEIHG 242
Query: 261 YLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG 320
++V+ GLD SD L SSL+DMY + + +R +FD++ +++ WT+MI+ Y ++
Sbjct: 243 HIVRAGLD----SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
+ L E+ + RPN+ + VL ACA L +GKQ+H + T+V + +
Sbjct: 299 RWREGFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
++L+DMY+KCG+++ A V D D ++W+S+I +G+ +EA+ + +L+ G
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPK-PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
KPD +T V+VLSAC+ +GLV++G+ + S+ ++++ T + C+VD+L RSG+ +Q
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 501 EFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYK 560
I MP+ P +W S+L +GN + A + L ++EPENP Y++++N YA+
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 561 RWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMT 620
+W+ ++R M+E G+ K PG SW I H F D +HP + I + L +L M
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 621 D 621
+
Sbjct: 597 E 597
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 207/463 (44%), Gaps = 52/463 (11%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRL------------------------ 65
L+Q+ RA ++ H I T+GF + RL
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150
Query: 66 -------VSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGR 118
V+ YA G L +R +F + K+ Y W +++ GYVK + ALVL+ M R
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 119 SHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCG 178
P+ +T++ + ++ + GK I G +S+M MY +CG
Sbjct: 211 VPNSR---PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 179 EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTI 238
+A +FD++ +++V S+ MI + F S+ + + F + + +T
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRY-----FKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
A +L C T + + G+++H Y+ + G D + SSL+DMY++ + ++ V
Sbjct: 323 AGVLNACADLTTE-ELGKQVHGYMTRVGFDPYSFA----SSSLVDMYTKCGNIESAKHVV 377
Query: 299 DQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGL 358
D +L WT++I G QNG P++AL ++ +K G +P+ V+ ++VL AC G +
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYF-DLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 359 IVGKQ-IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMIS 417
G + ++ + K L+ + + L+D+ ++ G + V + W+S++
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 418 AYGLHGRGEEAVVTYQKMLQLGIKPD----MITVVSVLSACSK 456
+G + A Q++ + I+P+ +T+ ++ +A K
Sbjct: 497 GCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGK 537
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 39/324 (12%)
Query: 235 AFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
A T +L+ VC +T + G+++H ++ +G + + + L+ MY++ LV +
Sbjct: 85 ASTYCNLIQVC-SQTRALEEGKKVHEHIRTSGF----VPGIVIWNRLLRMYAKCGSLVDA 139
Query: 295 RRVFDQMKSRNLYVWTAMINGYVQNG-------------------------------APE 323
R+VFD+M +R+L W M+NGY + G PE
Sbjct: 140 RKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPE 199
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
+AL+L MQ RPN ++ + A A + + GK+IH + L+ D L+++L
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
+DMY KCG +D A +FD + +D ++W+SMI Y R E + +++ +P+
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVE-KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPN 318
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
T VL+AC+ + G ++ +TR P + +VDM + G ++ A +
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHG-YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 504 KGMPLDPGPSVWGSLLTASVMHGN 527
G P P W SL+ +G
Sbjct: 378 DGCP-KPDLVSWTSLIGGCAQNGQ 400
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 13/240 (5%)
Query: 328 LLRE--MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
LLRE + +P + +++ C+ L GK++H ++N L+
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMI 445
MY+KCGSL A +VFD + RD +W+ M++ Y G EEA + +M + D
Sbjct: 129 MYAKCGSLVDARKVFDEMPN-RDLCSWNVMVNGYAEVGLLEEARKLFDEMTE----KDSY 183
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF--- 502
+ ++++ K +E + +Y+ + +P + + V + + E
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 503 IKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRW 562
I LD +W SL+ M+G D A ++ ++ ++ S+ + Y RW
Sbjct: 244 IVRAGLDSDEVLWSSLMD---MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 284/558 (50%), Gaps = 19/558 (3%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
L+S YA G L + +F + ++V N + G+++NRE VL + M S G D
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFD- 154
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
TL + V + + K+I + N ++ Y +CG
Sbjct: 155 ----HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
VFD M RNV + +ISG + N G L+ RR + ++ T S L
Sbjct: 211 GVFDGMSHRNVITLTAVISGL--IENELHEDGLRLFSLMRRGLV---HPNSVTYLSALAA 265
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
C G + + G+++H L K G++ S++ + S+L+DMYS+ + + +F+
Sbjct: 266 CSG-SQRIVEGQQIHALLWKYGIE----SELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 305 NLYVWTAMINGYVQNGAPEDAL-ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ 363
+ T ++ G QNG+ E+A+ +R +Q + N VS +VL + L +GKQ
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS--AVLGVSFIDNSLGLGKQ 378
Query: 364 IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHG 423
+H+ K + +G+T + N LI+MYSKCG L + VF + R+ ++W+SMI+A+ HG
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK-RNYVSWNSMIAAFARHG 437
Query: 424 RGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEIC 483
G A+ Y++M L +KP +T +S+L ACS GL+D+G + N + + ++P E
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY 497
Query: 484 ACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEP 543
C++DMLGR+G L +A FI +PL P +W +LL A HG++ + A L + P
Sbjct: 498 TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
Query: 544 ENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHP 603
++ S +I ++N Y+S +W + MK G+ K GIS I I THSF V DK HP
Sbjct: 558 DSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHP 617
Query: 604 SSSLIYDMLDDLVAIMTD 621
+ IYD+L L +M D
Sbjct: 618 QAEAIYDVLSGLFPVMVD 635
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 218/424 (51%), Gaps = 35/424 (8%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
NS++++Y++CG+ DA+K+FDEMP R+V S N++ G+ L N + SG + +RM
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGF--LRNRETESG---FVLLKRML 148
Query: 228 CEGYNADAFTIASLLPVC-----CGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
G D T+ +L VC C T + +H + +G D ++ +G+ LI
Sbjct: 149 GSG-GFDHATLTIVLSVCDTPEFCLVT------KMIHALAILSGYD----KEISVGNKLI 197
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
Y + V R VFD M RN+ TA+I+G ++N ED L L M+ + + PN
Sbjct: 198 TSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMR-RGLVHPNS 256
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
V+ +S L AC+ ++ G+QIHA K + + + +AL+DMYSKCGS++ A +F++
Sbjct: 257 VTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ D ++ + ++ +G EEA+ + +MLQ G++ D +V+SA +D
Sbjct: 317 TTEV-DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID----ANVVSAVLGVSFIDN 371
Query: 463 GMGI---YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
+G+ +SL+ + + + +++M + G L + + MP S W S++
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMI 430
Query: 520 TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
A HG+ + Y + LE + P++ LS +A ++ + R ++ E +K+
Sbjct: 431 AAFARHGHGLAALKLYEEMTTLEVK-PTDVTFLSLLHAC-SHVGLIDKGRELLNE--MKE 486
Query: 580 VPGI 583
V GI
Sbjct: 487 VHGI 490
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 185/404 (45%), Gaps = 20/404 (4%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
+T+ HA + +G+ + + +L+++Y G R VF + +NV ++I+G +
Sbjct: 173 VTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLI 232
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYT-LATISKVSGELQDLVYGKLIPGKSXXXXX 160
+N L LF M R V P+ T L+ ++ SG Q +V G+ I
Sbjct: 233 ENELHEDGLRLFSLMRRG----LVHPNSVTYLSALAACSGS-QRIVEGQQIHALLWKYGI 287
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+++M MYS+CG DA +F+ + + S V++ G A G S +
Sbjct: 288 ESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNG-----SEEEAI 342
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
FF RM G DA ++++L V G++LH ++K K + + +
Sbjct: 343 QFFIRMLQAGVEIDANVVSAVLGVSF-IDNSLGLGKQLHSLVIKR----KFSGNTFVNNG 397
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
LI+MYS+ L S+ VF +M RN W +MI + ++G AL L EM + ++P
Sbjct: 398 LINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKP 456
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVE-LNGDTSLFNALIDMYSKCGSLDYASRV 399
V+ +S+L AC+ +G + G+++ +V + T + +IDM + G L A
Sbjct: 457 TDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSF 516
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
D++ D W +++ A HG E +++ Q PD
Sbjct: 517 IDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA--PD 558
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 177/602 (29%), Positives = 293/602 (48%), Gaps = 58/602 (9%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLV--SAYATSGDLNMSR 79
I H+ L LL + RA LTQ H + G + + T +L+ A + S L +R
Sbjct: 3 IAIHHCLSLLNSCKNLRA--LTQ-IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYAR 59
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
+ + +++N+L+ GY ++ E +++ +F EM R V PD ++ A + K
Sbjct: 60 RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRK---GFVFPDSFSFAFVIKAV 116
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
+ L G + ++ +++ MY CG A KVFDEM Q N+ ++N
Sbjct: 117 ENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWN 176
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
+I+ A G D+ A A I +
Sbjct: 177 AVIT--------ACFRGNDV-------------AGAREIFDKM----------------- 198
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
LV+N + ++ Y ++ +L ++R+F +M R+ W+ MI G N
Sbjct: 199 --LVRNHTSWNV---------MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
G+ ++ + RE+Q + GM PN+VSL VL AC+ G GK +H F K + S+
Sbjct: 248 GSFNESFLYFRELQ-RAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 380 FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
NALIDMYS+CG++ A VF+ + R ++W+SMI+ +HG+GEEAV + +M G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
+ PD I+ +S+L ACS +GL++EG ++ + Y ++P +E C+VD+ GRSG+L +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 500 LEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASY 559
+FI MP+ P VW +LL A HGN + + L EL+P N + + LSN YA+
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 560 KRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
+W V +R M + +KK S + + + F G+K ++ L +++ +
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 620 TD 621
D
Sbjct: 547 KD 548
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 283/558 (50%), Gaps = 53/558 (9%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
+ L +Q H L GF + L L+ YA + D+N + L+F + NV WN +I
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX 158
G+ + ++ M R G P++ T
Sbjct: 324 GFGQEYRSDKSVEFLTRM-RDSG---FQPNEVTCI------------------------- 354
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
SV+ R G+ ++F +PQ +V ++N M+SG+++ ++
Sbjct: 355 ----------SVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN- 403
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
FR+MQ + D T++ +L C + + G+++H +++ ++ + H+
Sbjct: 404 ----FRQMQFQNLKPDKTTLSVILSSC-ARLRFLEGGKQIHGVVIRT----EISKNSHIV 454
Query: 279 SSLIDMYSRSKKLVLSRRVFDQ-MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
S LI +YS +K+ +S +FD + ++ W +MI+G+ N ALIL R M
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
+ PN+ S +VL +C+ L L+ G+Q H K D+ + AL DMY KCG +D A
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR 574
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+ FD V ++ + W+ MI YG +GRG+EAV Y+KM+ G KPD IT VSVL+ACS S
Sbjct: 575 QFFDAV-LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHS 633
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
GLV+ G+ I +S+ + ++P ++ C+VD LGR+G+L+ A + + P +W
Sbjct: 634 GLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEI 693
Query: 518 LLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERG 576
LL++ +HG+ S+ R +A + L+ L+P++ + Y+ LSNTY+S ++WD ++ +M +
Sbjct: 694 LLSSCRVHGDVSLARRVAEK-LMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNR 752
Query: 577 LKKVPGISWITISGNTHS 594
+ K PG SW T + S
Sbjct: 753 VHKTPGQSWTTYGNDLDS 770
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 214/513 (41%), Gaps = 97/513 (18%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
L LL+ D R + H I+ G + +L RL+ Y GD + +R VF +
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMG---------------------------RS 119
++VY WN+ + K + G A +F M +
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 120 HGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE 179
D LP +TLA++ ++ D V+G G + N++++MY++CG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 180 FGD-AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTI 238
D ++VF+ + Q N S+ +I G A FR M +G D+ +
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQ-----MFRLMCEKGVQVDSVCL 243
Query: 239 ASLLPVCCGKTG--------KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK 290
+++L + + G + G+++HC L L G D+HL +SL+++Y+++K
Sbjct: 244 SNILSISAPREGCDSLSEIYGNELGKQIHCL----ALRLGFGGDLHLNNSLLEIYAKNKD 299
Query: 291 LVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
+ + +F +M N+ W MI G+ Q + ++ L M+ G +PN+V+ ISVL
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR-DSGFQPNEVTCISVLG 358
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAI 410
AC G + G++I ++S +VS
Sbjct: 359 ACFRSGDVETGRRI------------------------------FSSIPQPSVS------ 382
Query: 411 TWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY--- 467
W++M+S Y + EEA+ +++M +KPD T+ +LS+C++ ++ G I+
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 468 ------------NSLITRYQMKPTVEICACVVD 488
+ LI Y +EI C+ D
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFD 475
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 242/433 (55%), Gaps = 13/433 (3%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG--DLWCFFRR 225
+ ++ ++S C A K+FD++ ++ + V WA++ S +G D +
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKV----WAAMAIGYSRNGSPRDALIVYVD 226
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
M C F+I+ L C GR +H +VK K D + + L+ +Y
Sbjct: 227 MLCSFIEPGNFSISVALKACV-DLKDLRVGRGIHAQIVKR----KEKVDQVVYNVLLKLY 281
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
S +R+VFD M RN+ W ++I+ + + L R+MQ ++ + + +L
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSWATL 340
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
++LPAC+ + L+ GK+IHA K + D L N+L+DMY KCG ++Y+ RVFD V
Sbjct: 341 TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFD-VML 399
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
+D +W+ M++ Y ++G EE + ++ M++ G+ PD IT V++LS CS +GL + G+
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
++ + T +++ P +E AC+VD+LGR+G++ +A++ I+ MP P S+WGSLL + +H
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 526 GNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
GN ++A + L LEP NP NY+ +SN YA K WD V ++R MMK+RG+KK G SW
Sbjct: 520 GNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSW 579
Query: 586 ITISGNTHSFAVG 598
+ + F G
Sbjct: 580 VQVKDKIQIFVAG 592
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 16/337 (4%)
Query: 20 AFITPHN--LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNM 77
+FI P N + L+ VD + R+ + HAQI+ + + L+ Y SG +
Sbjct: 230 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD 289
Query: 78 SRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISK 137
+R VF + +NV WNSLI+ K LFR+M G TL TI
Sbjct: 290 ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA----TLTTILP 345
Query: 138 VSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS 197
+ L+ GK I + NS+M MY +CGE + +VFD M +++ S
Sbjct: 346 ACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 405
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
+N+M++ +A GN F M G D T +LL C TG +YG
Sbjct: 406 WNIMLNCYAINGNIEEVIN-----LFEWMIESGVAPDGITFVALLS-GCSDTGLTEYGLS 459
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGY 316
L + + ++ + + L+D+ R+ K+ + +V + M + + +W +++N
Sbjct: 460 L---FERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSC 516
Query: 317 VQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
+G I +E+ + + P ++S + A A
Sbjct: 517 RLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNV--SYFRDAITWSSMISAYGLHGRGEEAVV 430
L + L + LI ++S C LD A ++FD+V S W++M Y +G +A++
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
Y ML I+P ++ L AC + G GI+ ++ R + V + ++ +
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV-VYNVLLKLY 281
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
SG D A + GM + W SL++
Sbjct: 282 MESGLFDDARKVFDGMS-ERNVVTWNSLIS 310
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 228/399 (57%), Gaps = 14/399 (3%)
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
FFR G+ +D+F +L+ K G R + D DV + +++
Sbjct: 108 FFR----SGFESDSFCCTTLI-TAYAKLGALCCARRV--------FDEMSKRDVPVWNAM 154
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
I Y R + + +FD M +N+ WT +I+G+ QNG +AL + M+ ++PN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
++++SVLPACA LG L +G+++ ++ + + + NA I+MYSKCG +D A R+F+
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ R+ +W+SMI + HG+ +EA+ + +ML+ G KPD +T V +L AC G+V
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
+G ++ S+ +++ P +E C++D+LGR G+L +A + IK MP+ P VWG+LL A
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
HGN ++A L +LEP NP N + +SN YA+ ++WD V +R +MK+ + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 582 GISW-ITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
G S+ + + + H F V DK+HP S IY +L+++ M
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRM 493
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 147/280 (52%), Gaps = 26/280 (9%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N+++ Y R G+ AM++FD MP++NV S+ +ISG++ GN++ L F +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEA----LKMFLCMEK 207
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
+ + T+ S+LP C G+ + GR L Y +NG ++++ ++ I+MYS+
Sbjct: 208 DKSVKPNHITVVSVLPA-CANLGELEIGRRLEGYARENGF----FDNIYVCNATIEMYSK 262
Query: 288 SKKLVLSRRVFDQM-KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ +++R+F+++ RNL W +MI +G ++AL L +M +++G +P+ V+ +
Sbjct: 263 CGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM-LREGEKPDAVTFV 321
Query: 347 SVLPACALLGGLIVGKQ--------IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
+L AC + GG++V Q +H S K+E G +ID+ + G L A
Sbjct: 322 GLLLAC-VHGGMVVKGQELFKSMEEVHKISPKLEHYG------CMIDLLGRVGKLQEAYD 374
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ + DA+ W +++ A HG E A + + + +L
Sbjct: 375 LIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 140/349 (40%), Gaps = 81/349 (23%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLI--------- 97
H+Q +GF + F T L++AYA G L +R VF + ++V +WN++I
Sbjct: 105 HSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDM 164
Query: 98 ----------------------NGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI 135
+G+ +N + AL +F M + V P+ T+ ++
Sbjct: 165 KAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS---VKPNHITVVSV 221
Query: 136 SKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM-PQRN 194
L +L G+ + G + N+ + MYS+CG A ++F+E+ QRN
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 195 VGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDY 254
+ S+N MI A+ G + F +M EG DA T LL C
Sbjct: 282 LCSWNSMIGSLATHGKH-----DEALTLFAQMLREGEKPDAVTFVGLLLAC--------- 327
Query: 255 GRELHCYLVKNGLDL-KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMI 313
+H +V G +L K +VH S ++ Y MI
Sbjct: 328 ---VHGGMVVKGQELFKSMEEVHKISPKLEHYG------------------------CMI 360
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
+ + G ++A L++ M MK P+ V ++L AC+ G + + +
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMK----PDAVVWGTLLGACSFHGNVEIAE 405
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 53/309 (17%)
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
++LH + ++ G+D L+ LV +R++FD ++ +++ +I
Sbjct: 5 KQLHAHCLRTGVDET--------KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 316 YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG 375
Y + P ++++L + DG+RP+ + + A A + +H+ +
Sbjct: 57 YYVHHQPHESIVLYNLLSF-DGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFES 115
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV------ 429
D+ LI Y+K G+L A RVFD +S RD W++MI+ Y G + A+
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSK-RDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 430 ----VT--------------YQKMLQL--------GIKPDMITVVSVLSACSKSGLVD-- 461
VT Y + L++ +KP+ ITVVSVL AC+ G ++
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 462 ---EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSL 518
EG N + +C ++M + G +D A + + W S+
Sbjct: 235 RRLEGYARENGFFD------NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 519 LTASVMHGN 527
+ + HG
Sbjct: 289 IGSLATHGK 297
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 290/580 (50%), Gaps = 38/580 (6%)
Query: 50 ILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVF-HSIEAKNVYLWNSLINGYVKNREFGH 108
+L + N + T+ + A++ + +R +F + + +L NS+I Y++ R++
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 109 ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVY-GKLIPGKSXXXXXXXXXXXA 167
+ L+R++ + C PD++T T++K S L VY G + + +
Sbjct: 61 SFALYRDLRKE---TCFAPDNFTFTTLTK-SCSLSMCVYQGLQLHSQIWRFGFCADMYVS 116
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM- 226
V+ MY++ G+ G A FDEMP R+ S+ +ISG+ G S F +M
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK-----LFDQMP 171
Query: 227 ---QCEGYNA--DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
YNA D F K+G R L D V +++
Sbjct: 172 HVKDVVIYNAMMDGFV----------KSGDMTSARRL--------FDEMTHKTVITWTTM 213
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
I Y K + +R++FD M RNL W MI GY QN P++ + L +EMQ + P+
Sbjct: 214 IHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPD 273
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
V+++SVLPA + G L +G+ H F + +L+ + A++DMYSKCG ++ A R+FD
Sbjct: 274 DVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ + +W++MI Y L+G A+ + M+ + KPD IT+++V++AC+ GLV+
Sbjct: 334 EMPE-KQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVE 391
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
EG ++ ++ + +E C+VD+LGR+G L +A + I MP +P + S L+A
Sbjct: 392 EGRKWFH-VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+ + + + +ELEP+N NY+ L N YA+ KRWD V+ +M++ KK
Sbjct: 451 CGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV 510
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
G S I I+ F GD HP I+ +L DL+ M +
Sbjct: 511 GCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNE 550
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 310/653 (47%), Gaps = 87/653 (13%)
Query: 43 TQQC---HAQILTNGFA-QNPFLTTRLVSAYATSGDLNMSRLVFHSIEA---KNVYLWNS 95
QQC HAQ+L + F ++ L L+S YA G L +R VF ++ ++ LWNS
Sbjct: 69 AQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNS 128
Query: 96 LINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKS 155
++ V + + +AL L+R M R G + D Y L I + L + +
Sbjct: 129 ILKANVSHGLYENALELYRGM-RQRG---LTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG----------- 204
N ++ +Y + G GDA +F EMP RN S+NVMI G
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 205 -----------------WASLGNFASTSGG--DLWCFFRRMQCEGYNADAFTIASLLPVC 245
W S+ + S G D+ +F M+ G +A VC
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 246 CGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR- 304
+ ++H Y++K G + + S ++LI +Y + K+ + +F Q++++
Sbjct: 305 -AELEALSIAEKVHGYVIKGGFEEYLPSR----NALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 305 --------------------------------------NLYVWTAMINGYVQNGAPEDAL 326
N+ WT++I G G +D+L
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
R+MQ + N V++ +L CA L L +G++IH + ++ + + NAL++M
Sbjct: 420 EYFRQMQFSKVL-ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNM 478
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
Y+KCG L S VF+ + +D I+W+S+I YG+HG E+A+ + +M+ G PD I
Sbjct: 479 YAKCGLLSEGSLVFEAIRD-KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 447 VVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
+V+VLSACS +GLV++G I+ S+ R+ ++P E AC+VD+LGR G L +A E +K M
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 507 PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVT 566
P++P V G+LL + MH N + L LEPE +Y+ LSN Y++ RW+
Sbjct: 598 PMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESA 657
Query: 567 EVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIM 619
VR + K++ LKKV G SWI + + F+ G IY +L+DLV+ M
Sbjct: 658 NVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 255/456 (55%), Gaps = 27/456 (5%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS-------FNVMISGWASLGNFASTSGGDL 219
AN+++ YS+ D+ + F++ PQ++ + F W SL
Sbjct: 53 ANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLE---------- 102
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
F ++M D + S C + D GR +HC +K G D +DV +GS
Sbjct: 103 --FLKKMMAGNLRPDDHVLPSATK-SCAILSRCDIGRSVHCLSMKTGYD----ADVFVGS 155
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
SL+DMY++ ++V +R++FD+M RN+ W+ M+ GY Q G E+AL L +E + + +
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE-ALFENLA 214
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
N S SV+ CA L +G+QIH S K + + + ++L+ +YSKCG + A +V
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F+ V ++ W++M+ AY H ++ + +++M G+KP+ IT ++VL+ACS +GL
Sbjct: 275 FNEVP-VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
VDEG ++ + +++PT + A +VDMLGR+G+L +ALE I MP+DP SVWG+LL
Sbjct: 334 VDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 520 TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
T+ +H N+ A + EL P + +ISLSN YA+ R++ + R ++++RG KK
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 580 VPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
G+SW+ H+FA G++ H S IY+ L +L
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 203/429 (47%), Gaps = 23/429 (5%)
Query: 17 SATAFITP-HNLLELLQLTVDHRAHRLT---QQCHAQILTNGFAQNPFLTTRLVSAYATS 72
+++AF P HN ++ L + R T Q H ++ +G + P + L++ Y+ S
Sbjct: 4 NSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKS 63
Query: 73 GDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTL 132
SR F K+ W+S+I+ + +N +L ++M + + PDD+ L
Sbjct: 64 QLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN----LRPDDHVL 119
Query: 133 ATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQ 192
+ +K L G+ + S +S++ MY++CGE A K+FDEMPQ
Sbjct: 120 PSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ 179
Query: 193 RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW 252
RNV +++ M+ G+A +G LW F+ E + ++ +S++ VC T
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEA----LW-LFKEALFENLAVNDYSFSSVISVCANST-LL 233
Query: 253 DYGRELHCYLVKNGL--DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
+ GR++H GL S +GSSL+ +YS+ + +VF+++ +NL +W
Sbjct: 234 ELGRQIH------GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN 287
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
AM+ Y Q+ + + L + M++ GM+PN ++ ++VL AC+ G + G+ +
Sbjct: 288 AMLKAYAQHSHTQKVIELFKRMKL-SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE 346
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
+ + +L+DM + G L A V N+ W +++++ +H E A
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAF 406
Query: 431 TYQKMLQLG 439
K+ +LG
Sbjct: 407 AADKVFELG 415
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 292/596 (48%), Gaps = 79/596 (13%)
Query: 46 CHAQILTNGFAQNPFLT-TRLVSAYATSGDLNMSRLVFHSIEA-KNVYLWNSLINGYVKN 103
A+ L +G + +T T +++ Y GD+ +R +F +++ KNV W ++++GY+++
Sbjct: 63 AEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRS 122
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
++ A +LF+EM P+ ++ + +I G
Sbjct: 123 KQLSIAEMLFQEM----------PERNVVS-------------WNTMIDG---------- 149
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
Y++ G A+++FDEMP+RN+ S+N M+ G F
Sbjct: 150 ----------YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMN-----LF 194
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGREL-HC---------------YLVKNGL 267
RM D + +++ K GK D R L C Y N +
Sbjct: 195 ERMP----RRDVVSWTAMVD-GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 268 D-------LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG 320
D + D +++I + R++++ + +FD+M +N+ WT MI GYV+N
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
E+AL + +M ++PN + +S+L AC+ L GL+ G+QIH +K + +
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT 369
Query: 381 NALIDMYSKCGSLDYASRVFDN-VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
+AL++MYSK G L A ++FDN + RD I+W+SMI+ Y HG G+EA+ Y +M + G
Sbjct: 370 SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
KP +T +++L ACS +GLV++GM + L+ + E C+VD+ GR+G+L
Sbjct: 430 FKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV 489
Query: 500 LEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASY 559
FI S +G++L+A +H + +LE ++ Y+ +SN YA+
Sbjct: 490 TNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAAN 549
Query: 560 KRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
+ + E+R MKE+GLKK PG SW+ + H F VGDK+HP + +L DL
Sbjct: 550 GKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 35/275 (12%)
Query: 290 KLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVL 349
K+ +R++FD + R++ WT +I GY++ G +A RE+ + R N V+
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA----RELFDRVDSRKN------VV 110
Query: 350 PACALLGGLIVGKQIHA----FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
A++ G + KQ+ F E N +N +ID Y++ G +D A +FD +
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPERN--VVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
R+ ++W+SM+ A GR +EA+ +++M + D+++ +++ +K+G VDE
Sbjct: 169 -RNIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
+++ + R + I ++ ++D+A + + MP S W +++T + +
Sbjct: 224 LFDCMPERNIISWNAMITG-----YAQNNRIDEADQLFQVMPERDFAS-WNTMITGFIRN 277
Query: 526 GNSMTRDLAYRC-LLELEPENPSNYISLSNTYASY 559
R++ C L + PE N IS + Y
Sbjct: 278 -----REMNKACGLFDRMPE--KNVISWTTMITGY 305
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 280/617 (45%), Gaps = 75/617 (12%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
T +++ A SG + +R VF + + WN+++ Y + A+ LF ++ S
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 123 DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCG---- 178
PDDY+ I L ++ +G+ I NS++ MY +C
Sbjct: 68 ----PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 179 -----------------------------EFGDAMKVFDEMPQRNVGSFNVMISGWASLG 209
+F A+ VF EMP+R ++N+MISG A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 210 NFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL 269
S F+ M + D +T +SL+ C + YGR +H ++KNG
Sbjct: 184 KLESCLS-----LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSS 238
Query: 270 KMGSD-------VHLGS--------------------SLIDMYSRSKKLVLSRRVFDQMK 302
+ + LGS S+ID + + + VF
Sbjct: 239 AVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP 298
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
+N+ WT MI GY +NG E AL EM MK G+ + + +VL AC+ L L GK
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEM-MKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
IH G + NAL+++Y+KCG + A R F +++ +D ++W++M+ A+G+H
Sbjct: 358 MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN-KDLVSWNTMLFAFGVH 416
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI 482
G ++A+ Y M+ GIKPD +T + +L+ CS SGLV+EG I+ S++ Y++ V+
Sbjct: 417 GLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDH 476
Query: 483 CACVVDMLGRSGQL----DQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL 538
C++DM GR G L D A + + S W +LL A H ++ + L
Sbjct: 477 VTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVL 536
Query: 539 LELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVG 598
EP +++ LSN Y S RW +VR M ERG+KK PG SWI + +F VG
Sbjct: 537 KIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVG 596
Query: 599 DKAHPSSSLIYDMLDDL 615
D +HP + + L+ L
Sbjct: 597 DSSHPRLEELSETLNCL 613
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 197/465 (42%), Gaps = 62/465 (13%)
Query: 56 AQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFRE 115
++N L+ AY + + VF + + + WN +I+G+ + L LF+E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 116 MGRSHGGDCVLPDDYTLATI-SKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMY 174
M S PD YT +++ + S + ++VYG+++ NSV++ Y
Sbjct: 195 MLESE----FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 175 SRCGEFGDAMK-------------------------------VFDEMPQRNVGSFNVMIS 203
++ G DAM+ VF P++N+ ++ MI+
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
G+ G+ G FF M G ++D F ++L C G +G+ +H L+
Sbjct: 311 GYGRNGD-----GEQALRFFVEMMKSGVDSDHFAYGAVLHACSG-LALLGHGKMIHGCLI 364
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
G ++G++L+++Y++ + + R F + +++L W M+ + +G +
Sbjct: 365 HCGFQ----GYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD 420
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACA-----LLGGLIVGKQIHAFSTKVELNGDTS 378
AL L M + G++P+ V+ I +L C+ G +I + + +E++ T
Sbjct: 421 QALKLYDNM-IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT- 478
Query: 379 LFNALIDMYSKCGSL----DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
+IDM+ + G L D A+ V+ + +W +++ A H E K
Sbjct: 479 ---CMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELG-REVSK 534
Query: 435 MLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
+L++ + ++ V + + +G EG + ++ R MK T
Sbjct: 535 VLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVER-GMKKT 578
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 244/454 (53%), Gaps = 46/454 (10%)
Query: 170 VMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
++ ++ +CG A +VFDE+P+ + ++N MISG+ G +L +RM
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVK-----ELLLLVQRMSYS 129
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGREL----HCYLVKNGLDLKMGSDVHLGSSLIDMY 285
G AD +T++ +L + R L H ++K ++L D L ++L+D Y
Sbjct: 130 GEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL----DDVLITALVDTY 185
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD--------- 336
+S KL +R VF+ MK N+ T+MI+GY+ G EDA + ++KD
Sbjct: 186 VKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVE 245
Query: 337 ----------------------GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
G PN + SV+ AC++L VG+Q+HA K +
Sbjct: 246 GFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVY 305
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
+ ++L+DMY+KCG ++ A RVFD + ++ +W+SMI YG +G EEA+ + +
Sbjct: 306 THIKMGSSLLDMYAKCGGINDARRVFDQMQE-KNVFSWTSMIDGYGKNGNPEEALELFTR 364
Query: 435 MLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
M + I+P+ +T + LSACS SGLVD+G I+ S+ Y MKP +E AC+VD++GR+G
Sbjct: 365 MKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAG 424
Query: 495 QLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPEN-PSNYISLS 553
L++A EF + MP P +W +LL++ +HGN +A L +L + P Y++LS
Sbjct: 425 DLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALS 484
Query: 554 NTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
N YAS +WD V+++R +MK R + K G SW +
Sbjct: 485 NVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 212/446 (47%), Gaps = 53/446 (11%)
Query: 31 LQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNV 90
LQ ++ A + ++ HA I+ GF + ++ +L+ + G L+ +R VF + +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 91 YLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE--------- 141
+N +I+GY+K+ L+L + M S+ G+ D YTL+ + K S
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRM--SYSGEKA--DGYTLSMVLKASNSRGSTMILPR 156
Query: 142 -LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNV 200
L LV+ ++I +++ Y + G+ A VF+ M NV
Sbjct: 157 SLCRLVHARII-----KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTS 211
Query: 201 MISGWASLGN-------FASTSGGDLWCF------FRR--------------MQCEGYNA 233
MISG+ + G F +T D+ + F R MQ G++
Sbjct: 212 MISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP 271
Query: 234 DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVL 293
+ T AS++ C T + G+++H ++K+G+ + + +GSSL+DMY++ +
Sbjct: 272 NISTFASVIGACSVLTSH-EVGQQVHAQIMKSGV----YTHIKMGSSLLDMYAKCGGIND 326
Query: 294 SRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
+RRVFDQM+ +N++ WT+MI+GY +NG PE+AL L M+ + + PN V+ + L AC+
Sbjct: 327 ARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMK-EFRIEPNYVTFLGALSACS 385
Query: 354 LLGGLIVGKQI-HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITW 412
G + G +I + + + ++D+ + G L+ A + D+ W
Sbjct: 386 HSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIW 445
Query: 413 SSMISAYGLHGRGEEAVVTYQKMLQL 438
++++S+ LHG E A + ++ +L
Sbjct: 446 AALLSSCNLHGNVELASIAASELFKL 471
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 340 PNKVSLISVLPACALLGGL---------IVGKQIHAFSTKVELNGDTSLFNALIDMYSKC 390
P K ++ S+ PA + G L GK+IHA K D ++ L+ ++ KC
Sbjct: 23 PLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKC 82
Query: 391 GSLDYASRVFDNVSYFRDAIT-WSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS 449
G L YA +VFD + + ++ ++ MIS Y HG +E ++ Q+M G K D T+
Sbjct: 83 GCLSYARQVFDELP--KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 450 VLSACSKSG----LVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKG 505
VL A + G L + ++ I + ++ + +VD +SG+L+ A +
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 506 M 506
M
Sbjct: 201 M 201
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 262/491 (53%), Gaps = 23/491 (4%)
Query: 133 ATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQ 192
A S VS EL L++ K++ S + ++ Y R G A K+FDEMP+
Sbjct: 40 AVKSCVSIELCRLLHCKVVKSVSYRHGFI-----GDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 193 RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE--GYNADAFTIASLLPVCCGKTG 250
R++ S+N +ISG++ G G + RM G+ + T S++ C G
Sbjct: 95 RDLVSWNSLISGYSGRGYL-----GKCFEVLSRMMISEVGFRPNEVTFLSMISACV-YGG 148
Query: 251 KWDYGRELHCYLVKNGLDLKMG--SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV 308
+ GR +H GL +K G +V + ++ I+ Y ++ L S ++F+ + +NL
Sbjct: 149 SKEEGRCIH------GLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
W MI ++QNG E L M + G P++ + ++VL +C +G + + + IH
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEA 428
+G+ + AL+D+YSK G L+ +S VF ++ D++ W++M++AY HG G +A
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS-PDSMAWTAMLAAYATHGFGRDA 320
Query: 429 VVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
+ ++ M+ GI PD +T +L+ACS SGLV+EG + ++ RY++ P ++ +C+VD
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVD 380
Query: 489 MLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSN 548
+LGRSG L A IK MP++P VWG+LL A ++ ++ A L ELEP + N
Sbjct: 381 LLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRN 440
Query: 549 YISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLI 608
Y+ LSN Y++ W + +R +MK++GL + G S+I H F VGD +HP S I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Query: 609 YDMLDDLVAIM 619
L ++ M
Sbjct: 501 QKKLKEIRKKM 511
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 182/428 (42%), Gaps = 15/428 (3%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L + H +++ + ++ F+ +LV Y G + +F + +++ WNSLI+GY
Sbjct: 49 LCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYS 108
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
G + M S G P++ T ++ G+ I G
Sbjct: 109 GRGYLGKCFEVLSRMMISEVG--FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVL 166
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+ + Y + G+ + K+F+++ +N+ S+N MI L N + G +
Sbjct: 167 EEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIV--IHLQNGLAEKGLAYFN 224
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
RR+ G+ D T ++L C G + +H ++ G + + ++L
Sbjct: 225 MSRRV---GHEPDQATFLAVLR-SCEDMGVVRLAQGIHGLIMFGGFS----GNKCITTAL 276
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+D+YS+ +L S VF ++ S + WTAM+ Y +G DA+ E+ + G+ P+
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF-ELMVHYGISPD 335
Query: 342 KVSLISVLPACALLGGLIVGKQ-IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
V+ +L AC+ G + GK S + ++ ++ ++D+ + G L A +
Sbjct: 336 HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
+ + W +++ A ++ + +++ +L + D V + + S SGL
Sbjct: 396 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR-DGRNYVMLSNIYSASGLW 454
Query: 461 DEGMGIYN 468
+ I N
Sbjct: 455 KDASRIRN 462
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 253/473 (53%), Gaps = 47/473 (9%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A +V + + RN + +I G+A G F + + M+ E +FT ++LL
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKF-----DEAIAMYGCMRKEEITPVSFTFSALL 156
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
C G + GR+ H + L+ V++G+++IDMY + + + +R+VFD+M
Sbjct: 157 KAC-GTMKDLNLGRQFHAQTFR----LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 303 SRN-------------------------------LYVWTAMINGYVQNGAPEDALILLRE 331
R+ + WTAM+ G+ QN P++AL
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF--NALIDMYSK 389
M+ K G+R ++V++ + ACA LG + + K + + +ALIDMYSK
Sbjct: 272 ME-KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 390 CGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML-QLGIKPDMITVV 448
CG+++ A VF +++ ++ T+SSMI HGR +EA+ + M+ Q IKP+ +T V
Sbjct: 331 CGNVEEAVNVFMSMNN-KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFV 389
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL 508
L ACS SGLVD+G +++S+ + ++PT + C+VD+LGR+G+L +ALE IK M +
Sbjct: 390 GALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSV 449
Query: 509 DPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEV 568
+P VWG+LL A +H N ++A L ELEP+ NYI LSN YAS W V V
Sbjct: 450 EPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRV 509
Query: 569 RTMMKERGLKKVPGISWIT-ISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMT 620
R ++KE+GLKK P +SW+ +G H F G+ HP S+ I D L++LV +T
Sbjct: 510 RKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLT 562
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 221/487 (45%), Gaps = 48/487 (9%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNM---SRLVFHSIEAKNVYLWNSLINGY 100
+Q H +L G Q+ ++ T+L+ G + M +R V ++ +N +LW ++I GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLG-VPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+F A+ ++ M + + P +T + + K G ++DL G+ ++
Sbjct: 125 AIEGKFDEAIAMYGCMRKEE----ITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FAS 213
N+++ MY +C A KVFDEMP+R+V S+ +I+ +A +GN F S
Sbjct: 181 FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 214 TSGGDL--WC-----------------FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDY 254
D+ W +F RM+ G AD T+A + C + G Y
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA-CAQLGASKY 299
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
K+G V +GS+LIDMYS+ + + VF M ++N++ +++MI
Sbjct: 300 ADRAVQIAQKSGYS--PSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMIL 357
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
G +G ++AL L M + ++PN V+ + L AC+ G + G+Q+ F + +
Sbjct: 358 GLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV--FDSMYQTF 415
Query: 375 G---DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
G + ++D+ + G L A + +S W +++ A +H E A +
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 432 YQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLG 491
+ + +L +PD+I +LS S G+ LI +K T + + VVD
Sbjct: 476 AEHLFEL--EPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAV-SWVVD--- 529
Query: 492 RSGQLDQ 498
++GQ+ +
Sbjct: 530 KNGQMHK 536
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 255/475 (53%), Gaps = 55/475 (11%)
Query: 174 YSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ--CEGY 231
Y+ G+ ++ +F + ++ F I N AS +G F +Q
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAI-------NTASINGLKDQAFLLYVQLLSSEI 126
Query: 232 NADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKL 291
N + FT +SLL C K+GK +H +++K GL G D ++ + L+D+Y++ +
Sbjct: 127 NPNEFTFSSLLKSCSTKSGKL-----IHTHVLKFGL----GIDPYVATGLVDVYAKGGDV 177
Query: 292 VLSRRVFDQMKSRNLYV-------------------------------WTAMINGYVQNG 320
V +++VFD+M R+L W MI+GY Q+G
Sbjct: 178 VSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 237
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF--STKVELNGDTS 378
P DAL+L +++ + +P+++++++ L AC+ +G L G+ IH F S+++ LN
Sbjct: 238 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN--VK 295
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ LIDMYSKCGSL+ A VF++ +D + W++MI+ Y +HG ++A+ + +M +
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPR-KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Query: 439 -GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
G++P IT + L AC+ +GLV+EG+ I+ S+ Y +KP +E C+V +LGR+GQL
Sbjct: 355 TGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK 414
Query: 498 QALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 557
+A E IK M +D +W S+L + +HG+ + L+ L +N Y+ LSN YA
Sbjct: 415 RAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
Query: 558 SYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
S ++ V +VR +MKE+G+ K PGIS I I H F GD+ H S IY ML
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTML 529
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 183/412 (44%), Gaps = 48/412 (11%)
Query: 45 QCHAQILTNGF---AQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
Q HA IL + + P L +L AYA+ G + S +FH +++L+ + IN
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
N A +L+ ++ S + P+++T +++ K GKLI
Sbjct: 107 INGLKDQAFLLYVQLLSSE----INPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLG 158
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG----- 216
A ++ +Y++ G+ A KVFD MP+R++ S MI+ +A GN +
Sbjct: 159 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218
Query: 217 ---------------------GDLWCFFRRMQCEGY-NADAFTIASLLPVCCGKTGKWDY 254
D F+++ EG D T+ + L C + G +
Sbjct: 219 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS-ACSQIGALET 277
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
GR +H ++ + + L +V + + LIDMYS+ L + VF+ +++ W AMI
Sbjct: 278 GRWIHVFVKSSRIRL----NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
GY +G +DAL L EMQ G++P ++ I L ACA G +V + I F + +
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG--LVNEGIRIFESMGQEY 391
Query: 375 G---DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHG 423
G + L+ + + G L A N++ D++ WSS++ + LHG
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 39/318 (12%)
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
L V K+ D ++H ++++ L L V L L Y+ K+ S +F Q
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPV-LNLKLHRAYASHGKIRHSLALFHQT 90
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
+L+++TA IN NG + A +L ++ + + PN+ + S+L +C+ G
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQL-LSSEINPNEFTFSSLLKSCSTKS----G 145
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV------------------ 403
K IH K L D + L+D+Y+K G + A +VFD +
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 404 -------SYF-----RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDMITVVSV 450
+ F RD ++W+ MI Y HG +A++ +QK+L G KPD ITVV+
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDP 510
LSACS+ G ++ G I+ + +++ V++C ++DM + G L++A+ P
Sbjct: 266 LSACSQIGALETGRWIH-VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RK 323
Query: 511 GPSVWGSLLTASVMHGNS 528
W +++ MHG S
Sbjct: 324 DIVAWNAMIAGYAMHGYS 341
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 146/351 (41%), Gaps = 73/351 (20%)
Query: 62 TTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM---GR 118
+T +++ YA G++ +R +F S+ +++ WN +I+GY ++ AL+LF+++ G+
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 119 SHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCG 178
PD+ T+ ++ L G+ I ++ MYS+CG
Sbjct: 255 PK------PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 179 EFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ-CEGYNADAFT 237
+A+ VF++ P++++ ++N MI+G+A G D F MQ G T
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG-----YSQDALRLFNEMQGITGLQPTDIT 363
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDL--KMGSDV-------HLGSSLIDMYSRS 288
L C H LV G+ + MG + H G L+ + R+
Sbjct: 364 FIGTLQACA------------HAGLVNEGIRIFESMGQEYGIKPKIEHYG-CLVSLLGRA 410
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+L +R ++ +K+ N M + V SV
Sbjct: 411 GQL---KRAYETIKNMN--------------------------------MDADSVLWSSV 435
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
L +C L G ++GK+I + + + ++ ++ L ++Y+ G + ++V
Sbjct: 436 LGSCKLHGDFVLGKEIAEYLIGLNIK-NSGIYVLLSNIYASVGDYEGVAKV 485
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 301/594 (50%), Gaps = 18/594 (3%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQ-ILTN--GFAQNPFLTTRLVSAYATSGDLNMSRLVFH 83
L ELL++ + R+ + HA I+TN A++ + L++ Y + +R +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 84 SIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQ 143
+ +NV W +++ GY + L LF+ M S P+++ + K
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESR---PNEFVATVVFKSCSNSG 150
Query: 144 DLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
+ GK G N+++ MYS C G+A++V D++P ++ F+ +S
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
G+ G F G D+ R+ E + + T S L + + ++H +V
Sbjct: 211 GYLECGAF--KEGLDV---LRKTANEDFVWNNLTYLSSLRLF-SNLRDLNLALQVHSRMV 264
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
+ G + ++V +LI+MY + K++ ++RVFD ++N+++ T +++ Y Q+ + E
Sbjct: 265 RFGFN----AEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
+AL L +M K+ + PN+ + +L + A L L G +H K + NAL
Sbjct: 321 EALNLFSKMDTKE-VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNAL 379
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
++MY+K GS++ A + F ++ FRD +TW++MIS HG G EA+ + +M+ G P+
Sbjct: 380 VNMYAKSGSIEDARKAFSGMT-FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
IT + VL ACS G V++G+ +N L+ ++ ++P ++ C+V +L ++G A +F+
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498
Query: 504 KGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWD 563
+ P++ W +LL A + N +E P + Y+ LSN +A + W+
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558
Query: 564 VVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVA 617
V +VR++M RG+KK PG+SWI I TH F D HP +LIY + ++++
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMS 612
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 286/540 (52%), Gaps = 21/540 (3%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H + NG A + F+ + + S Y+ SG+ + + L F + ++++ W S+I ++ +
Sbjct: 253 HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDM 312
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
+ +F EM ++ G + PD ++ + G++ + GK G
Sbjct: 313 EESFDMFWEM-QNKG---MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV 368
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQR-NVGSFNVMISGWASLGNFASTSGGDLWCFFRR 225
NS+++MY + A K+F + + N ++N M+ G+ + FR+
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE-----LFRK 423
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
+Q G D+ + S++ C G G+ LHCY+VK LDL + + +SLID+Y
Sbjct: 424 IQNLGIEIDSASATSVIS-SCSHIGAVLLGKSLHCYVVKTSLDLT----ISVVNSLIDLY 478
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
+ L ++ R+F + + N+ W AMI YV E A+ L M + + +P+ ++L
Sbjct: 479 GKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRM-VSENFKPSSITL 536
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
+++L AC G L G+ IH + T+ E + SL ALIDMY+KCG L+ + +FD +
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
+DA+ W+ MIS YG+HG E A+ + +M + +KP T +++LSAC+ +GLV++G
Sbjct: 597 -KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 655
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
++ + +Y +KP ++ +C+VD+L RSG L++A + MP P +WG+LL++ + H
Sbjct: 656 LFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTH 714
Query: 526 GN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGIS 584
G M +A R + +P+N YI L+N Y++ +W+ R MM+E G+ K G S
Sbjct: 715 GEFEMGIRMAERAVAS-DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 252/539 (46%), Gaps = 30/539 (5%)
Query: 2 VLRKTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFL 61
+L+ +T + +S+ +++ H + L ++ + R + +A I+T G ++N F+
Sbjct: 5 LLKPNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLR---KHNALIITGGLSENIFV 61
Query: 62 TTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM---GR 118
++L+S+YA+ G N+S VFH + ++++LWNS+I + N ++ +L F M G+
Sbjct: 62 ASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQ 121
Query: 119 SHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN-SVMAMYSRC 177
S PD +T + EL G + G S + YS+C
Sbjct: 122 S-------PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKC 174
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFT 237
G DA VFDEMP R+V ++ +ISG + N S G C +M G + D
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISG--HVQNGESEGGLGYLC---KMHSAGSDVDKPN 229
Query: 238 IASLLP--VCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSR 295
+L C G GR LH + VKNGL S + SS+ YS+S +
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGL----ASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 296 RVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
F ++ +++ WT++I ++G E++ + EMQ K GM P+ V + ++ +
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNK-GMHPDGVVISCLINELGKM 344
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
+ GK H F + + D+++ N+L+ MY K L A ++F +S + W++M
Sbjct: 345 MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 404
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
+ YG + + ++K+ LGI+ D + SV+S+CS G V G ++ + +
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH-CYVVKTS 463
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLA 534
+ T+ + ++D+ G+ G L A D W +++ AS +H + +A
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMI-ASYVHCEQSEKAIA 519
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 252/481 (52%), Gaps = 42/481 (8%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
AN+++ +Y +CG A++VFDEMP R+ ++ +++ N A+ SG L F
Sbjct: 41 ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL----NQANLSGKTLSVFSSVG 96
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
G D F ++L+ C G D+GR++HC+ + + + +D + SSL+DMY+
Sbjct: 97 SSSGLRPDDFVFSALVKAC-ANLGSIDHGRQVHCHFIVS----EYANDEVVKSSLVDMYA 151
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD---------- 336
+ L ++ VFD ++ +N WTAM++GY ++G E+AL L R + +K+
Sbjct: 152 KCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 337 ---------------GMRPNKVSLI------SVLPACALLGGLIVGKQIHAFSTKVELNG 375
MR +V ++ S++ ACA L I G+Q+H + +
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDS 271
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
+ NALIDMY+KC + A +F + + RD ++W+S+I HG+ E+A+ Y M
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRH-RDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Query: 436 LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQ 495
+ G+KP+ +T V ++ ACS G V++G ++ S+ Y ++P+++ C++D+LGRSG
Sbjct: 331 VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGL 390
Query: 496 LDQALEFIKGMPLDPGPSVWGSLLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSN 554
LD+A I MP P W +LL+A G M +A + + ++PS YI LSN
Sbjct: 391 LDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSN 450
Query: 555 TYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDD 614
YAS W V+E R + E ++K PG S + + T F G+ +HP I+ +L
Sbjct: 451 IYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKK 510
Query: 615 L 615
L
Sbjct: 511 L 511
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 198/433 (45%), Gaps = 38/433 (8%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
+ PH L +L QL +R + HA I+ G Q L LV+ Y G + + V
Sbjct: 2 LIPHYLHQL-QLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
F + ++ W S++ + G L +F +G S G + PDD+ + + K
Sbjct: 61 FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSG---LRPDDFVFSALVKACAN 117
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
L + +G+ + +S++ MY++CG A VFD + +N S+ M
Sbjct: 118 LGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 177
Query: 202 ISGWASLGN--------------------------FASTSGGDLWCFFRRMQCEGYNA-D 234
+SG+A G S G + + F M+ E + D
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILD 237
Query: 235 AFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
++S++ C GR++H ++ G D S V + ++LIDMY++ ++ +
Sbjct: 238 PLVLSSIVGACANLAASI-AGRQVHGLVIALGFD----SCVFISNALIDMYAKCSDVIAA 292
Query: 295 RRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
+ +F +M+ R++ WT++I G Q+G E AL L +M + G++PN+V+ + ++ AC+
Sbjct: 293 KDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKPNEVTFVGLIYACSH 351
Query: 355 LGGLIVGKQIHAFSTK-VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWS 413
+G + G+++ TK + + L+D+ + G LD A + + + D TW+
Sbjct: 352 VGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWA 411
Query: 414 SMISAYGLHGRGE 426
+++SA GRG+
Sbjct: 412 ALLSACKRQGRGQ 424
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 246 CGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRN 305
C + + LH ++VK G+ L ++L+++Y + + +VFD+M R+
Sbjct: 13 CARNRTLTTAKALHAHIVKLGI----VQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 306 LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH 365
W +++ Q L + + G+RP+ +++ ACA LG + G+Q+H
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 366 AFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRG 425
E D + ++L+DMY+KCG L+ A VFD++ ++ I+W++M+S Y GR
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR-VKNTISWTAMVSGYAKSGRK 187
Query: 426 EEAVVTYQ 433
EEA+ ++
Sbjct: 188 EEALELFR 195
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 20/308 (6%)
Query: 57 QNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM 116
+N T +VS YA SG + +F + KN+Y W +LI+G+V++ + A +F EM
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 117 GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
R + D L++I L + G+ + G +N+++ MY++
Sbjct: 229 RRERVD---ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 177 CGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAF 236
C + A +F M R+V S+ +I G A G + M G +
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALA-----LYDDMVSHGVKPNEV 340
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
T L+ C G + GREL + K D + + + L+D+ RS L +
Sbjct: 341 TFVGLI-YACSHVGFVEKGRELFQSMTK---DYGIRPSLQHYTCLLDLLGRSGLLDEAEN 396
Query: 297 VFDQMK-SRNLYVWTAMINGYVQNGAPEDALI----LLREMQMKDGMRPNKVSLISVLPA 351
+ M + W A+++ + G + + L+ ++KD P+ L+S + A
Sbjct: 397 LIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD---PSTYILLSNIYA 453
Query: 352 CALLGGLI 359
A L G +
Sbjct: 454 SASLWGKV 461
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRD 408
L CA L K +HA K+ + L N L+++Y KCG+ +A +VFD + + RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH-RD 68
Query: 409 AITWSSMISAYGLHG-RGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
I W+S+++A G+ V G++PD +++ AC+ G +D G ++
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 468 -NSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
+ +++ Y V+ + +VDM + G L+ A
Sbjct: 129 CHFIVSEYANDEVVK--SSLVDMYAKCGLLNSA 159
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 251/473 (53%), Gaps = 55/473 (11%)
Query: 170 VMAMYSRCGEFGD---AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC----F 222
V M C + D A ++F+++ NV +N +I + + L+C
Sbjct: 45 VTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAY---------THNSLYCDVIRI 95
Query: 223 FRRMQCEGYN-ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
++++ + + D FT + C G G+++H +L K G + ++ ++L
Sbjct: 96 YKQLLRKSFELPDRFTFPFMFK-SCASLGSCYLGKQVHGHLCKFGPRFHVVTE----NAL 150
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRN-------------------------------LYVWT 310
IDMY + LV + +VFD+M R+ + WT
Sbjct: 151 IDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWT 210
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
AMI+GY G +A+ REMQ+ G+ P+++SLISVLP+CA LG L +GK IH ++ +
Sbjct: 211 AMISGYTGIGCYVEAMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGKWIHLYAER 269
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
T + NALI+MYSKCG + A ++F + +D I+WS+MIS Y HG A+
Sbjct: 270 RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG-KDVISWSTMISGYAYHGNAHGAIE 328
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
T+ +M + +KP+ IT + +LSACS G+ EG+ ++ + YQ++P +E C++D+L
Sbjct: 329 TFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVL 388
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYI 550
R+G+L++A+E K MP+ P +WGSLL++ GN +A L+ELEPE+ NY+
Sbjct: 389 ARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYV 448
Query: 551 SLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHP 603
L+N YA +W+ V+ +R M++ +KK PG S I ++ F GD + P
Sbjct: 449 LLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 203/428 (47%), Gaps = 48/428 (11%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ +A I+ +G +Q+ F+ T++V D++ + +F+ + NV+L+NS+I Y N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ + +++++ R LPD +T + K L GK + G
Sbjct: 87 SLYCDVIRIYKQLLRK---SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFH 143
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG------- 216
N+++ MY + + DA KVFDEM +R+V S+N ++SG+A LG G
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLD 203
Query: 217 -------------GDLWC------FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
+ C FFR MQ G D ++ S+LP C + G + G+
Sbjct: 204 KTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP-SCAQLGSLELGKW 262
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H Y + G + G + ++LI+MYS+ + + ++F QM+ +++ W+ MI+GY
Sbjct: 263 IHLYAERRGFLKQTG----VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG-------KQIHAFSTK 370
+G A+ EMQ + ++PN ++ + +L AC+ +G G +Q + K
Sbjct: 319 YHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
+E G LID+ ++ G L+ A + + D+ W S++S+ G + A+V
Sbjct: 378 IEHYG------CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALV 431
Query: 431 TYQKMLQL 438
+++L
Sbjct: 432 AMDHLVEL 439
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 296/561 (52%), Gaps = 37/561 (6%)
Query: 61 LTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSH 120
L T++++ Y S L + +F + ++V WNS+I+G V+ + A+ LF EM
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM---- 123
Query: 121 GGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGE 179
P+ ++ + V+G + GK+ + A NS++ Y + G+
Sbjct: 124 ------PERSVVSWTAMVNGCFRS---GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGK 174
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ--CEGYNADAFT 237
DA+K+F +MP +NV S+ MI G N S DL F+ M C + FT
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQ--NERSGEALDL---FKNMLRCCIKSTSRPFT 229
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG--SDVHLGSSLIDMYSRSKKLVLSR 295
+ C + G ++H GL +K+G + ++ +SLI Y+ K++ SR
Sbjct: 230 ---CVITACANAPAFHMGIQVH------GLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 296 RVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
+VFD+ + VWTA+++GY N EDAL + M +++ + PN+ + S L +C+ L
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNSCSAL 339
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
G L GK++H + K+ L D + N+L+ MYS G+++ A VF + + + ++W+S+
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSI 398
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRY- 474
I HGRG+ A V + +M++L +PD IT +LSACS G +++G ++ + +
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN 458
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLA 534
+ ++ C+VD+LGR G+L +A E I+ M + P VW +LL+A MH + + A
Sbjct: 459 HIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKA 518
Query: 535 YRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHS 594
+ L+ ++ + Y+ LSN YAS RW V+++R MK+ G+ K PG SW+ I G H
Sbjct: 519 AAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHE 578
Query: 595 FAVGDKAHPSSSLIYDMLDDL 615
F GD+ P S IY+ L+ L
Sbjct: 579 FFSGDQ--PHCSRIYEKLEFL 597
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 17/280 (6%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
A + Q H I+ GF +++ L++ YA + SR VF + V +W +L++
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLS 299
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX 158
GY N++ AL +F M R + +LP+ T A+ L L +GK + G +
Sbjct: 300 GYSLNKKHEDALSIFSGMLR----NSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
NS++ MYS G DA+ VF ++ ++++ S+N +I G A G G
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR-----GKW 410
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK--NGLDLKMGSDVH 276
+ F +M D T LL C G + GR+L Y+ N +D K +
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSA-CSHCGFLEKGRKLFYYMSSGINHIDRK----IQ 465
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMING 315
+ ++D+ R KL + + ++M + N VW A+++
Sbjct: 466 HYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
V L + +I Y+RS +LV + +FD+M R++ W +MI+G V+ G A+ L EM
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
+ + VS +++ C G + +++ + V+ DT+ +N+++ Y + G +D
Sbjct: 126 R-----SVVSWTAMVNGCFRSGKVDQAERLF-YQMPVK---DTAAWNSMVHGYLQFGKVD 176
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
A ++F + ++ I+W++MI + R EA+ ++ ML+ IK V++AC
Sbjct: 177 DALKLFKQMPG-KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 455 SKSGLVDEGMGIYNSLI 471
+ + G+ ++ +I
Sbjct: 236 ANAPAFHMGIQVHGLII 252
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 254/474 (53%), Gaps = 42/474 (8%)
Query: 175 SRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNAD 234
S G A VF P N N MI + L + S +R++ D
Sbjct: 58 SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAI--TVYRKLWALCAKPD 115
Query: 235 AFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
FT +L + + W +GR++H +V G D S VH+ + LI MY L +
Sbjct: 116 TFTFPFVLKIAVRVSDVW-FGRQIHGQVVVFGFD----SSVHVVTGLIQMYFSCGGLGDA 170
Query: 295 RRVFDQMKSRNLYVWTAM---------------------------------INGYVQNGA 321
R++FD+M +++ VW A+ I+GY ++G
Sbjct: 171 RKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 322 PEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFN 381
+A+ + + M M++ + P++V+L++VL ACA LG L +G++I ++ +N SL N
Sbjct: 231 ASEAIEVFQRMLMEN-VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
A+IDMY+K G++ A VF+ V+ R+ +TW+++I+ HG G EA+ + +M++ G++
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNE-RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
P+ +T +++LSACS G VD G ++NS+ ++Y + P +E C++D+LGR+G+L +A E
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKR 561
IK MP ++WGSLL AS +H + + A L++LEP N NY+ L+N Y++ R
Sbjct: 409 VIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGR 468
Query: 562 WDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
WD +R MMK G+KK+ G S I + + F GD HP I+++L ++
Sbjct: 469 WDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 189/411 (45%), Gaps = 42/411 (10%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY-VK 102
+Q H ++ G ++ + + A + +G L + VF N YL N++I +
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 103 NREFGH--ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+ H A+ ++R++ C PD +T + K++ + D+ +G+ I G+
Sbjct: 92 DEPNAHSIAITVYRKLW----ALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNF--------- 211
++ MY CG GDA K+FDEM ++V +N +++G+ +G
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 212 -------------------ASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW 252
S + F+RM E D T+ ++L C G
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS-ACADLGSL 266
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM 312
+ G + Y+ G M V L +++IDMY++S + + VF+ + RN+ WT +
Sbjct: 267 ELGERICSYVDHRG----MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI-HAFSTKV 371
I G +G +AL + M +K G+RPN V+ I++L AC+ +G + +GK++ ++ +K
Sbjct: 323 IAGLATHGHGAEALAMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKY 381
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
++ + + +ID+ + G L A V ++ + +A W S+++A +H
Sbjct: 382 GIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 211/354 (59%), Gaps = 5/354 (1%)
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ 333
D+ +S+++ Y+++ + +R++FD+M RN+ W+ +INGYV G ++AL L REMQ
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 334 MKDG----MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSK 389
+ +RPN+ ++ +VL AC LG L GK +HA+ K + D L ALIDMY+K
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 390 CGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL-GIKPDMITVV 448
CGSL+ A RVF+ + +D +S+MI ++G +E + +M I P+ +T V
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL 508
+L AC GL++EG + +I + + P+++ C+VD+ GRSG + +A FI MP+
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 509 DPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEV 568
+P +WGSLL+ S M G+ T + A + L+EL+P N Y+ LSN YA RW V +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 569 RTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDG 622
R M+ +G+ KVPG S++ + G H F VGD++ S IY MLD+++ + +
Sbjct: 427 RHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA 480
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 21/280 (7%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
NSV+ Y++ G DA K+FDEMP+RNV S++ +I+G+ G + FR MQ
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD-----LFREMQ 186
Query: 228 CEGYN-----ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
N + FT++++L CG+ G + G+ +H Y+ K +++ D+ LG++LI
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSA-CGRLGALEQGKWVHAYIDKYHVEI----DIVLGTALI 241
Query: 283 DMYSRSKKLVLSRRVFDQMKS-RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
DMY++ L ++RVF+ + S +++ ++AMI G ++ L EM D + PN
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT---SLFNALIDMYSKCGSLDYASR 398
V+ + +L AC G + GK F +E G T + ++D+Y + G + A
Sbjct: 302 SVTFVGILGACVHRGLINEGKSY--FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAES 359
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
++ D + W S++S + G + +++++L
Sbjct: 360 FIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIEL 399
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 141/336 (41%), Gaps = 52/336 (15%)
Query: 14 YHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSG 73
+HT + HN L L L Q+ HAQIL G ++PF+ T L++ Y++ G
Sbjct: 62 FHTFPFLLPSFHNPLHL----------PLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG 111
Query: 74 DL-------------------------------NMSRLVFHSIEAKNVYLWNSLINGYVK 102
DL + +R +F + +NV W+ LINGYV
Sbjct: 112 DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM 171
Query: 103 NREFGHALVLFREMGRSHGGDC-VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
++ AL LFREM + V P+++T++T+ G L L GK +
Sbjct: 172 CGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE 231
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEM-PQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+++ MY++CG A +VF+ + +++V +++ MI A G +
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG----LTDECFQ 287
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F + N ++ T +L C + G + G+ +++ + + +
Sbjct: 288 LFSEMTTSDNINPNSVTFVGILGACVHR-GLINEGKSYFKMMIE---EFGITPSIQHYGC 343
Query: 281 LIDMYSRSKKLVLSRRVFDQMK-SRNLYVWTAMING 315
++D+Y RS + + M ++ +W ++++G
Sbjct: 344 MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 122/257 (47%), Gaps = 38/257 (14%)
Query: 307 YVWTAMINGYVQN-GAPEDALILLREMQMKDG-MRPNKVSLISVLPACALLGGLIVGKQI 364
++W +I V N +P+ + ++M++ + P+ + +LP+ L +G++
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN------------VSYF------ 406
HA L+ D + +L++MYS CG L A RVFD+ V+ +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 407 ------------RDAITWSSMISAYGLHGRGEEAVVTYQKML-----QLGIKPDMITVVS 449
R+ I+WS +I+ Y + G+ +EA+ +++M + ++P+ T+ +
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 450 VLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD 509
VLSAC + G +++G ++ + I +Y ++ + + ++DM + G L++A +
Sbjct: 205 VLSACGRLGALEQGKWVH-AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 510 PGPSVWGSLLTASVMHG 526
+ +++ M+G
Sbjct: 264 KDVKAYSAMICCLAMYG 280
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 278/554 (50%), Gaps = 43/554 (7%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRL-VFHSIEAKNVYLWNSLINGYVKN 103
Q HA+I+ G Q+ L + +S+ ++S VF + + YLWN LI GY
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
F + + M R+ PD+YT + KV + G + G
Sbjct: 88 FLFFETVSILMRMMRT---GLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKD 144
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
S + Y +C + A KVF EMP+RN S+ ++ + G
Sbjct: 145 VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELE----------- 193
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG--------LDLKMGSDV 275
+A ++ L+P G W+ L LVK+G D D+
Sbjct: 194 ----------EAKSMFDLMPE--RNLGSWN---ALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
+S+ID Y++ +V +R +F++ + ++ W+A+I GY QNG P +A + EM K
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF--NALIDMYSKCGSL 393
+ ++P++ ++ ++ AC+ +G + +++ ++ + +N +S + ALIDM +KCG +
Sbjct: 299 N-VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ-RMNKFSSHYVVPALIDMNAKCGHM 356
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
D A+++F+ + RD +++ SM+ +HG G EA+ ++KM+ GI PD + +L
Sbjct: 357 DRAAKLFEEMPQ-RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKV 415
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS 513
C +S LV+EG+ + + +Y + + + +C+V++L R+G+L +A E IK MP + S
Sbjct: 416 CGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHAS 475
Query: 514 VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMK 573
WGSLL +HGN+ ++ R L ELEP++ +Y+ LSN YA+ RW V +R M
Sbjct: 476 AWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMN 535
Query: 574 ERGLKKVPGISWIT 587
E G+ K+ G SWI+
Sbjct: 536 ENGITKICGRSWIS 549
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 173/427 (40%), Gaps = 79/427 (18%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
R+ H +L GF ++ + T V Y DL +R VF + +N W +L+ Y
Sbjct: 127 RVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAY 186
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
VK+ E A +F M + G + L+ G
Sbjct: 187 VKSGELEEAKSMFDLMPERNLGS-----------------------WNALVDG------- 216
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FAS 213
+ G+ +A K+FDEMP+R++ S+ MI G+A G+ F
Sbjct: 217 -------------LVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEE 263
Query: 214 TSGGDL--WC-----------------FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDY 254
G D+ W F M + D F + L+ C + G ++
Sbjct: 264 ARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSA-CSQMGCFEL 322
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
++ YL + + S ++ +LIDM ++ + + ++F++M R+L + +M+
Sbjct: 323 CEKVDSYLHQR---MNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMME 379
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS---TKV 371
G +G +A+ L +M + +G+ P++V+ +L C +V + + F K
Sbjct: 380 GMAIHGCGSEAIRLFEKM-VDEGIVPDEVAFTVILKVCG--QSRLVEEGLRYFELMRKKY 436
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
+ ++ ++++ S+ G L A + ++ + A W S++ LHG E A V
Sbjct: 437 SILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVV 496
Query: 432 YQKMLQL 438
+ + +L
Sbjct: 497 ARHLFEL 503
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 293/552 (53%), Gaps = 31/552 (5%)
Query: 43 TQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
TQ+ H+ + + A++P+ T+L YA + DL +R +F ++V+LWNS+I Y K
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+F L LF ++ RS PD++T A +++ E D + I G +
Sbjct: 84 AHQFTTVLSLFSQILRSD----TRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
++++ YS+ G +A K+F +P ++ +NVMI G+ G + G +L
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFW--DKGINL--- 194
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWD-----YGRELHCYLVKNGLDLKMGSDVHL 277
F MQ G+ + +T+ +L +G D +H + +K LD S ++
Sbjct: 195 FNLMQHRGHQPNCYTMVAL------TSGLIDPSLLLVAWSVHAFCLKINLD----SHSYV 244
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
G +L++MYSR + + VF+ + +L +++I GY + G ++AL L E++M G
Sbjct: 245 GCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRM-SG 303
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
+P+ V + VL +CA L + GK++H++ ++ L D + +ALIDMYSKCG L A
Sbjct: 304 KKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAM 363
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+F + ++ ++++S+I GLHG A + ++L++G+ PD IT ++L C S
Sbjct: 364 SLFAGIPE-KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHS 422
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM--PLDPGPSVW 515
GL+++G I+ + + + ++P E +V ++G +G+L++A EF+ + P+D G +
Sbjct: 423 GLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSG--IL 480
Query: 516 GSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY-ISLSNTYASYKRWDVVTEVRTMMKE 574
G+LL+ +H N+ ++ + + E S Y + LSN YA Y RWD V +R + E
Sbjct: 481 GALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Query: 575 RGLKKVPGISWI 586
K+PGISW
Sbjct: 541 SYGGKLPGISWF 552
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 293/582 (50%), Gaps = 43/582 (7%)
Query: 55 FAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFR 114
++QN L L++ YA G++ +R VF ++ +NV W +LI GYV+ LF
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 115 EMGRSHGGDCVLPDDYTLATISKVSGELQDLVY--GKLIPGKSXXXXXXXXXXXANSVMA 172
M SH P+++TL+++ L Y GK + G + AN+V++
Sbjct: 152 SM-LSH----CFPNEFTLSSV------LTSCRYEPGKQVHGLALKLGLHCSIYVANAVIS 200
Query: 173 MYSRCGEFG---DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
MY RC + +A VF+ + +N+ ++N MI+ + N + G F RM +
Sbjct: 201 MYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCC-NLGKKAIG----VFMRMHSD 255
Query: 230 GYNADAFTIASLLPVCCG--KTGKWDYGRELHCYLVKNGLDLKMG--SDVHLGSSLIDMY 285
G F A+LL +C K+ C L + L +K G + + ++LI +Y
Sbjct: 256 GV---GFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVY 312
Query: 286 SRS-KKLVLSRRVFDQMK-SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
S + ++F +M R++ W +I + PE A+ L +++ ++ + P+
Sbjct: 313 SEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLR-QEKLSPDWY 370
Query: 344 SLISVLPACALLGGLIVGKQ---IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ SVL ACA GL+ + IHA K DT L N+LI Y+KCGSLD RVF
Sbjct: 371 TFSSVLKACA---GLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVF 427
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
D++ RD ++W+SM+ AY LHG+ + + +QKM I PD T +++LSACS +G V
Sbjct: 428 DDMDS-RDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRV 483
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+EG+ I+ S+ + + P + ACV+DML R+ + +A E IK MP+DP VW +LL
Sbjct: 484 EEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLG 543
Query: 521 ASVMHGNSMTRDLAYRCLLEL-EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
+ HGN+ LA L EL EP N +YI +SN Y + ++ M+ ++K
Sbjct: 544 SCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRK 603
Query: 580 VPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
P +SW I H FA G + P +Y L L++ + +
Sbjct: 604 EPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HAQ++ GF + L L+ AYA G L++ VF +++++V WNS++ Y + +
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQV 451
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG-KLIPGKSXXXXXXXXXX 165
L +F++M + PD T + + G ++
Sbjct: 452 DSILPVFQKMD-------INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN 504
Query: 166 XANSVMAMYSRCGEFGDAMKVFDEMP 191
V+ M SR F +A +V +MP
Sbjct: 505 HYACVIDMLSRAERFAEAEEVIKQMP 530
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 223/374 (59%), Gaps = 8/374 (2%)
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
CC K+G G ++H + +G SD L ++L+D+YS + + +VFD++ R
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGF----LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKR 177
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMK-DG-MRPNKVSLISVLPACALLGGLIVGK 362
+ W + + Y++N D L+L +M+ DG ++P+ V+ + L ACA LG L GK
Sbjct: 178 DTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGK 237
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
Q+H F + L+G +L N L+ MYS+CGS+D A +VF + R+ ++W+++IS ++
Sbjct: 238 QVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE-RNVVSWTALISGLAMN 296
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLIT-RYQMKPTVE 481
G G+EA+ + +ML+ GI P+ T+ +LSACS SGLV EGM ++ + + +++KP +
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLEL 541
CVVD+LGR+ LD+A IK M + P ++W +LL A +HG+ + L+EL
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 542 EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKA 601
+ E +Y+ L NTY++ +W+ VTE+R++MKE+ + PG S I + G H F V D +
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 602 HPSSSLIYDMLDDL 615
HP IY ML ++
Sbjct: 477 HPRKEEIYKMLAEI 490
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 207/462 (44%), Gaps = 32/462 (6%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATS---GDLNMSRLVFHSIE 86
LL L V +Q HA +L +N + +S A S D+N S VF
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATIS-KVSGELQDL 145
+ N++I + ++ LFR + R+ LP + ++ + K + DL
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSS----LPANPLSSSFALKCCIKSGDL 129
Query: 146 VYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGW 205
+ G I GK ++M +YS C DA KVFDE+P+R+ S+NV+ S +
Sbjct: 130 LGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCY 189
Query: 206 ASLGNFASTSGGDLWCFFRRMQCE---GYNADAFTIASLLPVCCGKTGKWDYGRELHCYL 262
+ D+ F +M+ + D T L C G D+G+++H ++
Sbjct: 190 -----LRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA-CANLGALDFGKQVHDFI 243
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
+NGL ++L ++L+ MYSR + + +VF M+ RN+ WTA+I+G NG
Sbjct: 244 DENGL----SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLG----GLIVGKQIHAFSTKVELNGDTS 378
++A+ EM +K G+ P + +L +L AC+ G G++ ++ + K++ N
Sbjct: 300 KEAIEAFNEM-LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN--LH 356
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGE--EAVVTYQKML 436
+ ++D+ + LD A + ++ D+ W +++ A +HG E E V+++ L
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
+ D + +++ S K V E + R KP
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKE--KRIHTKP 456
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 8/289 (2%)
Query: 241 LLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
LL + TGK + R++H L++ L ++ H S + + + + S RVF Q
Sbjct: 14 LLSLIVSSTGKL-HLRQIHALLLRTSL-IRNSDVFHHFLSRLALSLIPRDINYSCRVFSQ 71
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
+ L MI + + P + L R ++ + N +S L C G L+
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLG 131
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
G QIH D+ L L+D+YS C + A +VFD + RD ++W+ + S Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK-RDTVSWNVLFSCYL 190
Query: 421 LHGRGEEAVVTYQKM---LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMK 477
+ R + +V + KM + +KPD +T + L AC+ G +D G +++ I +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD-FIDENGLS 249
Query: 478 PTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ + +V M R G +D+A + GM + W +L++ M+G
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNG 297
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 256/456 (56%), Gaps = 30/456 (6%)
Query: 169 SVMAMYSRCGEFGDAMKVFDEMP----QRNVGSFNVMISGWASLGNFASTSG--GDLWCF 222
S + + +R G +A K F +M + N +F ++SG G+F S S GDL
Sbjct: 41 SRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGDL--- 94
Query: 223 FRRMQCE-GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV-KNGLDLKMGSDVHLGSS 280
C+ G + + + + + K G++ R + Y+ KN + ++
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW---------NT 145
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
+ID Y RS ++ + ++FD+M R+L WTAMING+V+ G E+AL+ REMQ+ G++P
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI-SGVKP 204
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ V++I+ L AC LG L G +H + + + + N+LID+Y +CG +++A +VF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
N+ R ++W+S+I + +G E++V ++KM + G KPD +T L+ACS GLV
Sbjct: 265 YNMEK-RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
+EG+ + + Y++ P +E C+VD+ R+G+L+ AL+ ++ MP+ P V GSLL
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 521 ASVMHGNSMTRDLAYRC---LLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
A HGN++ LA R L +L ++ SNY+ LSN YA+ +W+ +++R MK GL
Sbjct: 384 ACSNHGNNIV--LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 578 KKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLD 613
KK PG S I I H F GD AH ++ I ++L+
Sbjct: 442 KKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 66/352 (18%)
Query: 57 QNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM 116
+N ++ Y SG ++ + +F + +++ W ++ING+VK AL+ FREM
Sbjct: 138 KNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM 197
Query: 117 GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
S V PD + L L +G + +NS++ +Y R
Sbjct: 198 QISG----VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCR 253
Query: 177 CGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAF 236
CG A +VF M +R V S+N +I G+A+ GN + +FR+MQ +G+ DA
Sbjct: 254 CGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES-----LVYFRKMQEKGFKPDAV 308
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGL--------DLKMGSDVHLGSSLIDMYSRS 288
T L C H LV+ GL D ++ + L+D+YSR+
Sbjct: 309 TFTGALTACS------------HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+L EDAL L++ M MK PN+V + S+
Sbjct: 357 GRL-------------------------------EDALKLVQSMPMK----PNEVVIGSL 381
Query: 349 LPACALLG-GLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
L AC+ G +++ +++ T + + ++ + L +MY+ G + AS++
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSN-YVILSNMYAADGKWEGASKM 432
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H +L+ F N ++ L+ Y G + +R VF+++E + V WNS+I G+ N
Sbjct: 229 HRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNA 288
Query: 107 GHALVLFREMGRSHGGDCVLPDDYT----LATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+LV FR+M PD T L S V + L Y +++
Sbjct: 289 HESLVYFRKMQEKG----FKPDAVTFTGALTACSHVGLVEEGLRYFQIM---KCDYRISP 341
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQR 193
++ +YSR G DA+K+ MP +
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 220/396 (55%), Gaps = 40/396 (10%)
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS-KKLVLSRRVFDQMKSRNLYVWTAMINGY 316
+H +L K+G L V + ++L+ Y+ S + L+R++FD+M RN+ WTAM++GY
Sbjct: 148 VHTHLFKSGFHLY----VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGY 203
Query: 317 -------------------------------VQNGAPEDALILLREMQMKDGMRPNKVSL 345
QNG +A+ L R M + +RPN+V++
Sbjct: 204 ARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTV 263
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
+ VL ACA G L + K IHAF+ + +L+ D + N+L+D+Y KCG+L+ AS VF S
Sbjct: 264 VCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK 323
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI---KPDMITVVSVLSACSKSGLVDE 462
+ W+SMI+ + LHGR EEA+ +++M++L I KPD IT + +L+AC+ GLV +
Sbjct: 324 -KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G G ++ + R+ ++P +E C++D+LGR+G+ D+ALE + M + ++WGSLL A
Sbjct: 383 GRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNAC 442
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPG 582
+HG+ ++A + L+ L P N ++N Y W+ R M+K + K PG
Sbjct: 443 KIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPG 502
Query: 583 ISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAI 618
S I I H F DK+HP + IY +LD L++
Sbjct: 503 WSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 40/274 (14%)
Query: 291 LVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP---EDALILLREMQMKDGMRPNKVSLIS 347
L +R +FD+ N +++ A++ Y + P A R M + RPN
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMY-SKCGSLDYASRVFDNVSYF 406
VL + L +H K + + AL+ Y S + A ++FD +S
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE- 190
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQL---------------------------- 438
R+ ++W++M+S Y G AV ++ M +
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 439 ----GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
I+P+ +TVV VLSAC+++G + GI+ + R + V + +VD+ G+ G
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIH-AFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 495 QLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
L++A K M + W S++ +HG S
Sbjct: 310 NLEEASSVFK-MASKKSLTAWNSMINCFALHGRS 342
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
T ++S YA SGD++ + +F + ++V WN+++ +N F A+ LFR M
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINE--- 253
Query: 123 DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGD 182
+ P++ T+ + + L K I + +NS++ +Y +CG +
Sbjct: 254 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEE 313
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A VF ++++ ++N MI+ +A G S ++ ++ D T LL
Sbjct: 314 ASSVFKMASKKSLTAWNSMINCFALHGR--SEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
C G GR + L+ N ++ + H G LID+ R+ + + V MK
Sbjct: 372 NACT-HGGLVSKGRG-YFDLMTNRFGIEPRIE-HYG-CLIDLLGRAGRFDEALEVMSTMK 427
Query: 303 SR-NLYVWTAMING 315
+ + +W +++N
Sbjct: 428 MKADEAIWGSLLNA 441
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 229/386 (59%), Gaps = 11/386 (2%)
Query: 233 ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLV 292
A ++ L V C K + G+++HC++VKNG+ L SD H+ + ++ +Y K L+
Sbjct: 113 APSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFL---SDSHVQTGVLRIYVEDKLLL 169
Query: 293 LSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
+R+VFD++ ++ W ++NGYV+ G + L + REM +K G+ P++ S+ + L AC
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTAC 228
Query: 353 ALLGGLIVGKQIHAFSTKVE-LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAIT 411
A +G L GK IH F K + D + AL+DMY+KCG ++ A VF ++ R+ +
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR-RNVFS 287
Query: 412 WSSMISAYGLHGRGEEAVVTYQKM-LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSL 470
W+++I Y +G ++A+ +++ + GIKPD + ++ VL+AC+ G ++EG + ++
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 471 ITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMT 530
RY++ P E +C+VD++ R+G+LD AL I+ MP+ P SVWG+LL H N
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 531 RDLAYRCLLELE----PENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWI 586
+LA + LL+LE E + + LSN Y S +R ++VR M+++RG++K PG S +
Sbjct: 408 GELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVL 467
Query: 587 TISGNTHSFAVGDKAHPSSSLIYDML 612
+ GN F GD +HP+ I+ ++
Sbjct: 468 EVDGNVTKFVSGDVSHPNLLQIHTVI 493
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 152/326 (46%), Gaps = 16/326 (4%)
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
+ H + +GL + L ++ + + + +K + +FD ++ N +V+ MI
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 316 YVQNGAPEDAL--ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
++ P L LL + ++ + P+ ++ ++ AC VGKQIH + K
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVK--- 144
Query: 374 NG----DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
NG D+ + ++ +Y + L A +VFD + D + W +++ Y G G E +
Sbjct: 145 NGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQ-PDVVKWDVLMNGYVRCGLGSEGL 203
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
+++ML G++PD +V + L+AC++ G + +G I+ + + ++ V + +VDM
Sbjct: 204 EVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDM 263
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPEN--PS 547
+ G ++ A+E K + S W +L+ +G + A CL LE E+
Sbjct: 264 YAKCGCIETAVEVFKKLTRRNVFS-WAALIGGYAAYGYAKK---AMTCLERLEREDGIKP 319
Query: 548 NYISLSNTYASYKRWDVVTEVRTMMK 573
+ + L A+ + E R+M++
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRSMLE 345
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 44 QQCHAQILTNG-FAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
+Q H ++ NG F + + T ++ Y L +R VF I +V W+ L+NGYV+
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLI-PGKSXXXXXX 161
L +FREM G + PD++++ T ++ L GK I
Sbjct: 196 CGLGSEGLEVFREM-LVKGLE---PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
+++ MY++CG A++VF ++ +RNV S+ +I G+A+ G +A + + C
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG-YAKKA---MTC 307
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
R + +G D+ + +L C G + GR + L ++ S +
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAA-CAHGGFLEEGRSM---LENMEARYEITPKHEHYSCI 363
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLY-VWTAMING 315
+D+ R+ +L + + ++M + L VW A++NG
Sbjct: 364 VDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 215/434 (49%), Gaps = 51/434 (11%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A + FD P+R++ +N MISG+ +GN F +M C
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARS-----LFDQMPCR------------- 119
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
DV +++++ Y+ + RVFD M
Sbjct: 120 -------------------------------DVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
RN++ W +I GY QNG + L + M + + PN ++ VL ACA LG GK
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 363 QIHAFSTKVELNG-DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
+H + + N D ++ NALIDMY KCG+++ A VF + RD I+W++MI+
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTMINGLAA 267
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
HG G EA+ + +M GI PD +T V VL AC GLV++G+ +NS+ T + + P +E
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE 327
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLEL 541
C CVVD+L R+G L QA+EFI MP+ +W +LL AS ++ ++A L++L
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL 387
Query: 542 EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKA 601
EP NP+N++ LSN Y R+D ++ M++ G KK G+SWI F +
Sbjct: 388 EPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK 447
Query: 602 HPSSSLIYDMLDDL 615
HP + + +L +L
Sbjct: 448 HPRTEELQRILREL 461
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 177/360 (49%), Gaps = 24/360 (6%)
Query: 81 VFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSG 140
VF + KNV LW S+INGY+ N++ A R S D VL + + +SG
Sbjct: 50 VFCEMVEKNVVLWTSMINGYLLNKDLVSAR---RYFDLSPERDIVLWN-------TMISG 99
Query: 141 ELQDLVYGKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
++ G ++ +S + N+V+ Y+ G+ +VFD+MP+RNV S+N
Sbjct: 100 YIE---MGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
+I G+A G + G F+RM EG +L+ C K G +D+G+ +H
Sbjct: 157 GLIKGYAQNGRVSEVLGS-----FKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
Y G + DV++ ++LIDMY + + ++ VF +K R+L W MING +
Sbjct: 212 KYGETLGYN---KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTS 378
G +AL L EM+ G+ P+KV+ + VL AC +G + G ++ T + +
Sbjct: 269 GHGTEALNLFHEMK-NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE 327
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
++D+ S+ G L A + + DA+ W++++ A ++ + + V +++++L
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL 387
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 43/255 (16%)
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ 333
+V L +S+I+ Y +K LV +RR FD R++ +W MI+GY++ G +A L +M
Sbjct: 58 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 117
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
+D M +N +++ Y+ G +
Sbjct: 118 CRDVMS----------------------------------------WNTVLEGYANIGDM 137
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDMITVVSVLS 452
+ RVFD++ R+ +W+ +I Y +GR E + ++++M+ G + P+ T+ VLS
Sbjct: 138 EACERVFDDMPE-RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 453 ACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
AC+K G D G ++ T K V + ++DM G+ G ++ A+E KG+
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 513 SVWGSLLTASVMHGN 527
S W +++ HG+
Sbjct: 257 S-WNTMINGLAAHGH 270
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 30/259 (11%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
++ YA GD+ VF + +NV+ WN LI GY +N L F+ M
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS--- 183
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPG-KSXXXXXXXXXXXANSVMAMYSRCGEFGDA 183
V+P+D T+ + +L +GK + N+++ MY +CG A
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 184 MKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLP 243
M+VF + +R++ S+N MI+G A+ G+ G + F M+ G + D T +L
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGH-----GTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 244 VCCGKTGKWDYGRELHCYLVKNGL--------DLKMGSDVHLGSSLIDMYSRSKKLVLSR 295
C H LV++GL D + ++ ++D+ SR+ L +
Sbjct: 299 AC------------KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAV 346
Query: 296 RVFDQMKSR-NLYVWTAMI 313
++M + + +W ++
Sbjct: 347 EFINKMPVKADAVIWATLL 365
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 284/556 (51%), Gaps = 35/556 (6%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L Q H L G + ++ L+S YA R VF + ++ + S+IN
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 102 KNREFGHALVLFREM------GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKS 155
++ A+ L +EM +S +L + + SKV+ LV L+ +
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV---LVDER- 180
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS 215
+ +++ MY + + A VFD+M +N S+ MISG + N+
Sbjct: 181 ----MQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY--EM 234
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYG----RELHCYLVKNGLDLKM 271
G DL FR MQ E + T+ S+LP C + +YG +E+H + ++G
Sbjct: 235 GVDL---FRAMQRENLRPNRVTLLSVLPACV----ELNYGSSLVKEIHGFSFRHGCH--- 284
Query: 272 GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLRE 331
+D L ++ + MY R + LSR +F+ K R++ +W++MI+GY + G + + LL +
Sbjct: 285 -ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCG 391
M+ K+G+ N V+L++++ AC L +H+ K L NALIDMY+KCG
Sbjct: 344 MR-KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCG 402
Query: 392 SLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
SL A VF ++ +D ++WSSMI+AYGLHG G EA+ ++ M++ G + D + +++L
Sbjct: 403 SLSAAREVFYELTE-KDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAIL 461
Query: 452 SACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG 511
SAC+ +GLV+E I+ +Y M T+E AC +++LGR G++D A E MP+ P
Sbjct: 462 SACNHAGLVEEAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPS 520
Query: 512 PSVWGSLLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRT 570
+W SLL+A HG + + L++ EP+NP+NY+ LS + + EVR
Sbjct: 521 ARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRR 580
Query: 571 MMKERGLKKVPGISWI 586
+M+ R L K G S I
Sbjct: 581 VMQRRKLNKCYGFSKI 596
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 184/389 (47%), Gaps = 23/389 (5%)
Query: 41 RLTQQCHAQILTNGFAQNP-FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
++ + HA +L + Q L+T LV Y D + VF +E KN W ++I+G
Sbjct: 166 KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISG 225
Query: 100 YVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG----KLIPGKS 155
V N+ + + LFR M R + + P+ TL ++ EL YG K I G S
Sbjct: 226 CVANQNYEMGVDLFRAMQREN----LRPNRVTLLSVLPACVELN---YGSSLVKEIHGFS 278
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS 215
+ M MY RCG + +F+ R+V ++ MISG+A G+ +
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCS--- 335
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDV 275
++ +M+ EG A++ T+ +++ C T + +H ++K G S +
Sbjct: 336 --EVMNLLNQMRKEGIEANSVTLLAIVSACTNST-LLSFASTVHSQILKCGF----MSHI 388
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK 335
LG++LIDMY++ L +R VF ++ ++L W++MIN Y +G +AL + + M +K
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM-IK 447
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
G + ++ +++L AC G + + I + K + + I++ + G +D
Sbjct: 448 GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDD 507
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGR 424
A V N+ A WSS++SA HGR
Sbjct: 508 AFEVTINMPMKPSARIWSSLLSACETHGR 536
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 12/243 (4%)
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSK 289
G N + S++ C + + G +LHC +K G D D + +SLI MY++
Sbjct: 41 GTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGAD----CDTVVSNSLISMYAKFS 96
Query: 290 KLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVL 349
+ R+VFD+M R+ + ++IN Q+G +A+ L++EM G P + S+L
Sbjct: 97 RKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFY-GFIPKSELVASLL 155
Query: 350 PACALLG-GLIVGKQIHAFSTKVELNGDTSLFN-ALIDMYSKCGSLDYASRVFDNVSYFR 407
C +G V + HA E ++ L + AL+DMY K A VFD + +
Sbjct: 156 ALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQME-VK 214
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK----SGLVDEG 463
+ ++W++MIS + E V ++ M + ++P+ +T++SVL AC + S LV E
Sbjct: 215 NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEI 274
Query: 464 MGI 466
G
Sbjct: 275 HGF 277
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 247/457 (54%), Gaps = 26/457 (5%)
Query: 170 VMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
++ + S + A +VFD + + +N +I A + + + +R+M
Sbjct: 89 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAH----DVSRKEEAFMLYRKMLER 144
Query: 230 GYNA-DAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
G ++ D T +L C G + G+++HC +VK+G G DV++ + LI +Y
Sbjct: 145 GESSPDKHTFPFVLKACAYIFG-FSEGKQVHCQIVKHGF----GGDVYVNNGLIHLYGSC 199
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
L L+R+VFD+M R+L W +MI+ V+ G + AL L REMQ P+ ++ SV
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--SFEPDGYTMQSV 257
Query: 349 LPACALLGGLIVGKQIHAF---STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
L ACA LG L +G HAF V++ D + N+LI+MY KCGSL A +VF +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKML--QLGIKPDMITVVSVLSACSKSGLVDEG 463
RD +W++MI + HGR EEA+ + +M+ + ++P+ +T V +L AC+ G V++G
Sbjct: 318 -RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKG 376
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
++ ++ Y ++P +E C+VD++ R+G + +A++ + MP+ P +W SLL A
Sbjct: 377 RQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACC 436
Query: 524 MHGNS--MTRDLAYRCLLELEPENPSN------YISLSNTYASYKRWDVVTEVRTMMKER 575
G S ++ ++A + E SN Y+ LS YAS RW+ V VR +M E
Sbjct: 437 KKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEH 496
Query: 576 GLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
G++K PG S I I+G +H F GD +HP + IY L
Sbjct: 497 GIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 31/388 (7%)
Query: 44 QQCHAQILTNGFAQNP---FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
+Q HA L + + P FL +++ ++ D+N + VF SIE + ++WN+LI
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 101 ---VKNREFGHALVLFREM---GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGK 154
V +E A +L+R+M G S PD +T + K + GK + +
Sbjct: 125 AHDVSRKE--EAFMLYRKMLERGESS------PDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 155 SXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFAST 214
N ++ +Y CG A KVFDEMP+R++ S+N MI G + S
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 236
Query: 215 SGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSD 274
FR MQ + D +T+ S+L C G G G H +L++ D+ + D
Sbjct: 237 LQ-----LFREMQ-RSFEPDGYTMQSVLSACAG-LGSLSLGTWAHAFLLRK-CDVDVAMD 288
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILL-REMQ 333
V + +SLI+MY + L ++ +VF M+ R+L W AMI G+ +G E+A+ R +
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE---LNGDTSLFNALIDMYSKC 390
++ +RPN V+ + +L AC G + G+Q F V + + ++D+ ++
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQY--FDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 391 GSLDYASRVFDNVSYFRDAITWSSMISA 418
G + A + ++ DA+ W S++ A
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 20/284 (7%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H QI+ +GF + ++ L+ Y + G L+++R VF + +++ WNS+I+ V+
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPG---KSXXXXX 160
E+ AL LFREM RS PD YT+ ++ L L G +
Sbjct: 231 GEYDSALQLFREMQRS-----FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
NS++ MY +CG A +VF M +R++ S+N MI G+A+ G
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN---- 341
Query: 221 CFFRRM--QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
FF RM + E ++ T LL + C G + GR+ +V+ D + +
Sbjct: 342 -FFDRMVDKRENVRPNSVTFVGLL-IACNHRGFVNKGRQYFDMMVR---DYCIEPALEHY 396
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGYVQNGA 321
++D+ +R+ + + + M + + +W ++++ + GA
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 440
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 232/401 (57%), Gaps = 13/401 (3%)
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
++RRM + +T S++ C G+ +HC+ V +G G D ++ ++L
Sbjct: 94 YYRRMLSSNVSPSNYTFTSVIK-SCADLSALRIGKGVHCHAVVSGF----GLDTYVQAAL 148
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+ YS+ + +R+VFD+M +++ W ++++G+ QNG ++A+ + +M+ + G P+
Sbjct: 149 VTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR-ESGFEPD 207
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+ +S+L ACA G + +G +H + L+ + L ALI++YS+CG + A VFD
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ-LGIKPDMITVVSVLSACSKSGLV 460
+ + W++MISAYG HG G++AV + KM G P+ +T V+VLSAC+ +GLV
Sbjct: 268 KMKE-TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD---PGPSVWGS 517
+EG +Y + Y++ P VE C+VDMLGR+G LD+A +FI + P++W +
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 518 LLTASVMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERG 576
+L A MH N + ++A R L+ LEP+NP +++ LSN YA + D V+ +R M
Sbjct: 387 MLGACKMHRNYDLGVEIAKR-LIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Query: 577 LKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVA 617
L+K G S I + T+ F++GD++H + IY L+ L++
Sbjct: 446 LRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 20/404 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
QQ HA ++ G+ ++ L T+L++ ++ + + L+F S+ + +L+NS+I K
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
R H + +R M S+ V P +YT ++ K +L L GK + +
Sbjct: 86 RLPLHCVAYYRRMLSSN----VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+++ YS+CG+ A +VFD MP++++ ++N ++SG+ G + F
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG-----LADEAIQVF 196
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
+M+ G+ D+ T SLL C +TG G +H Y++ GLDL +V LG++LI+
Sbjct: 197 YQMRESGFEPDSATFVSLLSAC-AQTGAVSLGSWVHQYIISEGLDL----NVKLGTALIN 251
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+YSR + +R VFD+MK N+ WTAMI+ Y +G + A+ L +M+ G PN V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTK-VELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+ ++VL ACA G + G+ ++ TK L ++DM + G LD A +
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 403 VSYFRDAIT---WSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
+ A W++M+ A +H + V ++++ L +PD
Sbjct: 372 LDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIAL--EPD 413
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 20/299 (6%)
Query: 22 ITPHN--LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR 79
++P N +++ D A R+ + H + +GF + ++ LV+ Y+ GD+ +R
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR 162
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
VF + K++ WNSL++G+ +N A+ +F +M R G + PD T ++
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFE---PDSATFVSLLSAC 218
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
+ + G + +++ +YSRCG+ G A +VFD+M + NV ++
Sbjct: 219 AQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWT 278
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCE-GYNADAFTIASLLPVCCGKTGKWDYGREL 258
MIS + + G G F +M+ + G + T ++L C G + GR +
Sbjct: 279 AMISAYGTHG-----YGQQAVELFNKMEDDCGPIPNNVTFVAVLSA-CAHAGLVEEGRSV 332
Query: 259 HCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM----KSRNLYVWTAMI 313
+ + K+ L G + H+ ++DM R+ L + + Q+ K+ +WTAM+
Sbjct: 333 YKRMTKS-YRLIPGVEHHV--CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/562 (29%), Positives = 296/562 (52%), Gaps = 24/562 (4%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
++QI+ G++ N + T ++ Y++ GDL +R +F + ++ WN++I G +KN +
Sbjct: 222 NSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKI 281
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
L+ FR M S G D P +T + + +L GKLI +
Sbjct: 282 EDGLMFFRNMLMS-GVD---PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N+++ MY CG+ +A VF + N+ S+N +ISG + G G +RR+
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG-----FGEQAMLMYRRL 392
Query: 227 -QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
+ D +T ++ + + ++ +G+ LH + K G + V +G++L+ MY
Sbjct: 393 LRMSTPRPDEYTFSAAISAT-AEPERFVHGKLLHGQVTKLGYE----RSVFVGTTLLSMY 447
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
++++ +++VFD MK R++ +WT MI G+ + G E A+ EM ++ R + SL
Sbjct: 448 FKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM-YREKNRSDGFSL 506
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
SV+ AC+ + L G+ H + + + S+ AL+DMY K G + A +F S
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
D W+SM+ AY HG E+A+ ++++L+ G PD +T +S+L+ACS G +G
Sbjct: 567 -PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKF 625
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPG---PSVWGSLLTAS 522
++N + +K + +C+V+++ ++G +D+ALE I+ P PG +W +LL+A
Sbjct: 626 LWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP--PGNNQAELWRTLLSAC 682
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPG 582
V N A +L+L+PE+ + +I LSN YA RW+ V E+R ++ K PG
Sbjct: 683 VNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPG 742
Query: 583 ISWITI-SGNTHSFAVGDKAHP 603
+SWI + + NT F+ GD+++P
Sbjct: 743 LSWIEVNNNNTQVFSSGDQSNP 764
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 244/516 (47%), Gaps = 28/516 (5%)
Query: 21 FITPHN-----LLELLQLTVDHRAHRLTQQCHAQILTNGFA---QNPFLTTRLVSAYATS 72
F P N ++EL + V + +Q HA +LT G ++P+ L+S Y
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 73 GDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFG-HALVLFREMGRSHGGDCVLPDDYT 131
G L +R VF + +NV +N+L + Y +N +F +A L M + V P+ T
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY----VKPNSST 201
Query: 132 LATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP 191
++ +V L+D++ G + + SV+ MYS CG+ A ++FD +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGK 251
R+ ++N MI G SL N G FFR M G + FT + +L C K G
Sbjct: 262 NRDAVAWNTMIVG--SLKNDKIEDG---LMFFRNMLMSGVDPTQFTYSIVLN-GCSKLGS 315
Query: 252 WDYGRELHC-YLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
+ G+ +H +V + L +D+ L ++L+DMY + + VF ++ + NL W
Sbjct: 316 YSLGKLIHARIIVSDSL-----ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWN 370
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
++I+G +NG E A+++ R + RP++ + + + A A + GK +H TK
Sbjct: 371 SIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK 430
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
+ + L+ MY K + A +VFD V RD + W+ MI + G E AV
Sbjct: 431 LGYERSVFVGTTLLSMYFKNREAESAQKVFD-VMKERDVVLWTEMIVGHSRLGNSELAVQ 489
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
+ +M + + D ++ SV+ ACS ++ +G +++ L R + +C +VDM
Sbjct: 490 FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
G++G+ + A E I + +P W S+L A HG
Sbjct: 549 GKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHG 583
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 184/392 (46%), Gaps = 24/392 (6%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS----------GG 217
N++++MY RC A KVFD+MPQRN+ V + G +++ + S G
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNI----VTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
FF + N A ++ L C T R++H ++ G S +
Sbjct: 82 FQMIFFMPL-----NEIASSVVELTRKCVSIT-VLKRARQIHALVLTAGAGAATESP-YA 134
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
++LI MY R L +R+VFD+M RN+ + A+ + Y +N L +
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
++PN + S++ CA+L +++G +++ K+ + + + +++ MYS CG L+ A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
R+FD V+ RDA+ W++MI + + E+ ++ ++ ML G+ P T VL+ CSK
Sbjct: 255 RIFDCVNN-RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
G G I+ +I + + + ++DM G + +A ++ G +P W S
Sbjct: 314 GSYSLGKLIHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNS 371
Query: 518 LLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
+++ +G L YR LL + P Y
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 13/234 (5%)
Query: 276 HLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM--INGYVQNGAP-EDALILLREM 332
+ ++LI MY R L +R+VFD+M RN+ + + YV G+ +I L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 333 QMKDGMRPNKV--SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTS---LFNALIDMY 387
QM M N++ S++ + C + L +QIHA T N LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR-GEEAVVTYQKMLQLGIKPDMIT 446
+CGSL+ A +VFD + + R+ ++++++ SAY + A M +KP+ T
Sbjct: 143 VRCGSLEQARKVFDKMPH-RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 447 VVSVLSACSKSGLVDEGMG-IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
S++ C+ L D MG NS I + V + V+ M G L+ A
Sbjct: 202 FTSLVQVCAV--LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 230/409 (56%), Gaps = 17/409 (4%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN---ADAFTIA 239
A+ + ++P +V +N +IS S N ST + + ++ N + FT
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVS--NHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYP 116
Query: 240 SLLPVCCGKTGKWD-YGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
SL G +W +GR LH +++K + D + ++L+ Y+ KL +R +F
Sbjct: 117 SLFKAS-GFDAQWHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 299 DQMKSRNLYVWTAMINGYVQN---GAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
++++ +L W ++ Y + + E+ L+L MQ+ RPN++SL++++ +CA L
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV----RPNELSLVALIKSCANL 229
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
G + G H + K L + + +LID+YSKCG L +A +VFD +S RD +++M
Sbjct: 230 GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ-RDVSCYNAM 288
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
I +HG G+E + Y+ ++ G+ PD T V +SACS SGLVDEG+ I+NS+ Y
Sbjct: 289 IRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYG 348
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAY 535
++P VE C+VD+LGRSG+L++A E IK MP+ P ++W S L +S HG+ ++A
Sbjct: 349 IEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIAL 408
Query: 536 RCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGIS 584
+ LL LE EN NY+ LSN YA RW V + R +MK+ + K PGIS
Sbjct: 409 KHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 190/401 (47%), Gaps = 18/401 (4%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HAQI+T G + + + ++L+ +T L+ + + I +V+L+N+LI+ V N
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 104 REFGHALVLFREMGR--SHGGDCVLPDDYTLATISKVSG-ELQDLVYGKLIPGK--SXXX 158
+ F + S + V P+++T ++ K SG + Q +G+ +
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLE 144
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
+++ Y+ CG+ +A +F+ + + ++ ++N +++ +A+ S +
Sbjct: 145 PVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDE--E 202
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
+ F RMQ + ++ +L+ C G++ G H Y++KN L L + +G
Sbjct: 203 VLLLFMRMQVR---PNELSLVALIK-SCANLGEFVRGVWAHVYVLKNNLTL----NQFVG 254
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
+SLID+YS+ L +R+VFD+M R++ + AMI G +G ++ + L + + + G+
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL-ISQGL 313
Query: 339 RPNKVSLISVLPACALLGGLIVGKQI-HAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
P+ + + + AC+ G + G QI ++ + + L+D+ + G L+ A
Sbjct: 314 VPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAE 373
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ +A W S + + HG E + + +L L
Sbjct: 374 ECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGL 414
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 24/304 (7%)
Query: 36 DHRAHRLTQQCHAQILT--NGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLW 93
D + HR + HA +L + F+ LV YA G L +R +F I ++ W
Sbjct: 125 DAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATW 184
Query: 94 NSLINGYVKNREFG---HALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKL 150
N+L+ Y + E L+LF M V P++ +L + K L + V G
Sbjct: 185 NTLLAAYANSEEIDSDEEVLLLFMRMQ-------VRPNELSLVALIKSCANLGEFVRGVW 237
Query: 151 IPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN 210
S++ +YS+CG A KVFDEM QR+V +N MI G A G
Sbjct: 238 AHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHG- 296
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYL-VKNGLDL 269
G + ++ + +G D+ T + C +G D G ++ + G++
Sbjct: 297 ----FGQEGIELYKSLISQGLVPDSATFVVTISA-CSHSGLVDEGLQIFNSMKAVYGIEP 351
Query: 270 KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGYVQNGAPEDALIL 328
K+ H G L+D+ RS +L + +M + N +W + + +G E I
Sbjct: 352 KVE---HYG-CLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 329 LREM 332
L+ +
Sbjct: 408 LKHL 411
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 229/427 (53%), Gaps = 40/427 (9%)
Query: 222 FFRRMQCEGYN--ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
F+RR+ G + D +T+ L+ C G + + G ++H ++ G D +D H+ +
Sbjct: 93 FYRRILSSGNDLKPDNYTVNFLVQACTGLRMR-ETGLQVHGMTIRRGFD----NDPHVQT 147
Query: 280 SLIDMYS-------------------------------RSKKLVLSRRVFDQMKSRNLYV 308
LI +Y+ R +V +R++F+ M R+
Sbjct: 148 GLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIA 207
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
W AMI+GY Q G +AL + MQ+ +G++ N V++ISVL AC LG L G+ H++
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQL-EGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEA 428
+ ++ L L+D+Y+KCG ++ A VF + ++ TWSS ++ ++G GE+
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE-KNVYTWSSALNGLAMNGFGEKC 325
Query: 429 VVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
+ + M Q G+ P+ +T VSVL CS G VDEG ++S+ + ++P +E C+VD
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVD 385
Query: 489 MLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSN 548
+ R+G+L+ A+ I+ MP+ P +VW SLL AS M+ N LA + +LELE N
Sbjct: 386 LYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGA 445
Query: 549 YISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLI 608
Y+ LSN YA WD V+ VR MK +G++K PG S + ++G H F VGDK+HP + I
Sbjct: 446 YVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQI 505
Query: 609 YDMLDDL 615
+ D+
Sbjct: 506 DAVWKDI 512
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 198/431 (45%), Gaps = 49/431 (11%)
Query: 43 TQQCHAQILTNGFAQNPFLTTRLVSAYATSGD--LNMSRLVFHSIEAKNVYLWNSLINGY 100
+Q HA++ +G ++ L V A A S L+ + + E ++ NS+I +
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAH 81
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
K+ + +R + S G+ + PD+YT+ + + L+ G + G +
Sbjct: 82 CKSPVPEKSFDFYRRILSS--GNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 161 XXXXXXANSVMAMYS-------------------------------RCGEFGDAMKVFDE 189
++++Y+ RCG+ A K+F+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 190 MPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKT 249
MP+R+ ++N MISG+A +G + F MQ EG + + S+L C +
Sbjct: 200 MPERDPIAWNAMISGYAQVG-----ESREALNVFHLMQLEGVKVNGVAMISVLSACT-QL 253
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVW 309
G D GR H Y+ +N K+ V L ++L+D+Y++ + + VF M+ +N+Y W
Sbjct: 254 GALDQGRWAHSYIERN----KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTW 309
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
++ +NG NG E L L M+ +DG+ PN V+ +SVL C+++G + G Q H S
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSM 367
Query: 370 KVELNGDTSL--FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
+ E + L + L+D+Y++ G L+ A + + A WSS++ A ++ E
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 428 AVVTYQKMLQL 438
V+ +KML+L
Sbjct: 428 GVLASKKMLEL 438
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS--KKLVLSRRVFDQMKSRNLYVWTAMI 313
R++H L +G LK D HL + + S K L + ++ D+ + L+ +MI
Sbjct: 23 RQIHAKLYVDGT-LK---DDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 314 NGYVQNGAPEDALILLRE-MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
+ ++ PE + R + + ++P+ ++ ++ AC L G Q+H + +
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNV-------------------------SYF- 406
+ D + LI +Y++ G LD +VF+++ F
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 407 ----RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
RD I W++MIS Y G EA+ + M G+K + + ++SVLSAC++ G +D+
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G + S I R ++K TV + +VD+ + G +++A+E GM + W S L
Sbjct: 259 GRWAH-SYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGL 316
Query: 523 VMHG 526
M+G
Sbjct: 317 AMNG 320
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/586 (28%), Positives = 303/586 (51%), Gaps = 43/586 (7%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
++ H ++ +GF + ++ YA S L+ +R +F + ++V W+ +I YV++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX-XXXX 162
+E L LF+EM + PD T+ ++ K ++D+ G+ + G S
Sbjct: 204 KEPVVGLKLFKEMVHEAKTE---PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
NS++ MYS+ + A +VFDE RN+ S+N +++G+ +
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALE-----M 315
Query: 223 FRRMQCEGYNADAFTIASLLPVC--------CGKTGKWDYGRELHCYLVKNGLDLKMGSD 274
F M E D T+ SLL VC C + +H +++ G + ++
Sbjct: 316 FHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC---------KSIHGVIIRRGYE---SNE 363
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
V L SSLID Y+ + + V D M +++ + MI+G G ++A+ + M
Sbjct: 364 VAL-SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF--CHM 420
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN-GDTSLFNALIDMYSKCGSL 393
+D PN +++IS+L AC++ L K H + + L D S+ +++D Y+KCG++
Sbjct: 421 RD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAI 478
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+ A R FD ++ ++ I+W+ +ISAY ++G ++A+ + +M Q G P+ +T ++ LSA
Sbjct: 479 EMARRTFDQITE-KNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSA 537
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD--PG 511
C+ GLV +G+ I+ S++ KP+++ +C+VDML R+G++D A+E IK +P D G
Sbjct: 538 CNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAG 596
Query: 512 PSVWGSLLTASVMHGNSM--TRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVR 569
S WG++L+ + T ++ +LELEP S Y+ S+T+A+ K W+ V +R
Sbjct: 597 ASAWGAILSGCRNRFKKLIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMR 655
Query: 570 TMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
++KER ++ V G S + F GDK S S + D++ L
Sbjct: 656 RLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 198/413 (47%), Gaps = 65/413 (15%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
NS+ Y +CG+ ++ FD M R+ S+NV++ G L ++ G W F +++
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFG---LLDYGFEEEGLWW--FSKLR 119
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
G+ + T+ ++ C W G ++H Y++++G + S + +S++ MY+
Sbjct: 120 VWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGF-CGISS---VQNSILCMYAD 172
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
S L +R++FD+M R++ W+ +I YVQ+ P L L +EM + P+ V++ S
Sbjct: 173 SDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 231
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELN-GDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
VL AC ++ + VG+ +H FS + + D + N+LIDMYSK +D A RVFD +
Sbjct: 232 VLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTC- 290
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC------------ 454
R+ ++W+S+++ + + R +EA+ + M+Q ++ D +TVVS+L C
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 455 -----------------------SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLG 491
+ LVD+ + +S+ + V C+ ++ L
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK-----DVVSCSTMISGLA 405
Query: 492 RSGQLDQALEFIKGMPLDPGP----------SVWGSLLTASVMHGNSMTRDLA 534
+G+ D+A+ M P SV L T+ HG ++ R LA
Sbjct: 406 HAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA 458
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 6/224 (2%)
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
G+S+ D Y + L R FD M SR+ W ++ G + G E+ L ++++ G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW-G 122
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
PN +L+ V+ AC L G++IH + + G +S+ N+++ MY+ SL A
Sbjct: 123 FEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-AR 179
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML-QLGIKPDMITVVSVLSACSK 456
++FD +S RD I+WS +I +Y + +++M+ + +PD +TV SVL AC+
Sbjct: 180 KLFDEMSE-RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
+D G ++ I R V +C ++DM + +D A
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/579 (28%), Positives = 293/579 (50%), Gaps = 60/579 (10%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+ HAQIL G + + +LVS + + S +F + E +N ++ N+LI G +N
Sbjct: 46 RHVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTEN 104
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
F ++ F M R V PD T + K + +L G+ + +
Sbjct: 105 ARFESSVRHFILMLRL----GVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCD 160
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDL 219
S++ MY++ G+ A +VF+E P R ++ +NV+I+G+
Sbjct: 161 SFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY-------------- 206
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
C + M A T+ +P +G W S
Sbjct: 207 -CRAKDMHM------ATTLFRSMPE--RNSGSW--------------------------S 231
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
+LI Y S +L ++++F+ M +N+ WT +ING+ Q G E A+ EM ++ G++
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM-LEKGLK 290
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
PN+ ++ +VL AC+ G L G +IH + + D ++ AL+DMY+KCG LD A+ V
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F N+++ +D ++W++MI + +HGR +A+ +++M+ G KPD + ++VL+AC S
Sbjct: 351 FSNMNH-KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
VD G+ ++S+ Y ++PT++ VVD+LGR+G+L++A E ++ MP++P + W +L
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALY 469
Query: 520 TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
A H + + LLEL+PE +YI L T+AS V + R +++R ++
Sbjct: 470 RACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKER 529
Query: 580 VPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAI 618
G S+I + G + F+ GD +H + I LD+++++
Sbjct: 530 SLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISL 568
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 276/586 (47%), Gaps = 53/586 (9%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEA-KNVYLWNSLINGYVK 102
+Q H + GF + + L++ YA ++ + +F ++E KN W S++ GY +
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
N A+ FR++ R G + YT ++ + G +
Sbjct: 205 NGFAFKAIECFRDL-RREGNQ---SNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
++++ MY++C E A + + M +V S+N MI G G G+
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI-----GEALSM 315
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F RM D FTI S+L + HC +VK G + + ++L+
Sbjct: 316 FGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY----ATYKLVNNALV 371
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
DMY++ + + +VF+ M +++ WTA++ G NG+ ++AL L M++ G+ P+K
Sbjct: 372 DMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV-GGITPDK 430
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+ SVL A A L L G+Q+H K S+ N+L+ MY+KCGSL+ A+ +F++
Sbjct: 431 IVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNS 490
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ RD ITW+ +I Y +K+GL+++
Sbjct: 491 ME-IRDLITWTCLIVGY-----------------------------------AKNGLLED 514
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
++S+ T Y + P E AC++D+ GRSG + + + M ++P +VW ++L AS
Sbjct: 515 AQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAAS 574
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPG 582
HGN + A + L+ELEP N Y+ LSN Y++ R D VR +MK R + K PG
Sbjct: 575 RKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPG 634
Query: 583 ISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDG--CADM 626
SW+ G HSF D+ HP IY +D+++ ++ + ADM
Sbjct: 635 CSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADM 680
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 36/419 (8%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG---------------------- 204
+N ++ S+ G +A ++FD+MP+R+ ++N MI
Sbjct: 31 SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNT 90
Query: 205 --WASLGNFASTSGGDLWCF--FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHC 260
W +L + SG + F F MQ +G + +T+ S+L +C G ++H
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR-GEQIHG 149
Query: 261 YLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK-SRNLYVWTAMINGYVQN 319
+ +K G DL DV++ + L+ MY++ K++ + +F+ M+ +N WT+M+ GY QN
Sbjct: 150 HTIKTGFDL----DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
G A+ R+++ ++G + N+ + SVL ACA + VG Q+H K + +
Sbjct: 206 GFAFKAIECFRDLR-REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 380 FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
+ALIDMY+KC ++ A + + + D ++W+SMI G EA+ + +M +
Sbjct: 265 QSALIDMYAKCREMESARALLEGME-VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
+K D T+ S+L+ + S + + LI + + +VDM + G +D A
Sbjct: 324 MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSA 383
Query: 500 LEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYAS 558
L+ +GM ++ W +L+T + H S L C + + P ++ S AS
Sbjct: 384 LKVFEGM-IEKDVISWTALVTGNT-HNGSYDEALKLFCNMRVGGITPDKIVTASVLSAS 440
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 184/382 (48%), Gaps = 48/382 (12%)
Query: 248 KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLY 307
K+G+ D R++ D D +++I YS S++L + ++F +N
Sbjct: 40 KSGRVDEARQM--------FDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 308 VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF 367
W A+I+GY ++G+ +A L EMQ DG++PN+ +L SVL C L L+ G+QIH
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQ-SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH 150
Query: 368 STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
+ K + D ++ N L+ MY++C + A +F+ + ++ +TW+SM++ Y +G +
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVV 487
A+ ++ + + G + + T SVL+AC+ G+ ++ I + K + + + ++
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH-CCIVKSGFKTNIYVQSALI 269
Query: 488 DMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV----------MHGNSMTRDLA--- 534
DM + +++ A ++GM +D S W S++ V M G RD+
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDD 328
Query: 535 ------YRCL----LELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERG-----LKK 579
C E++ + ++ + + YA+YK V + M +RG LK
Sbjct: 329 FTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL--VNNALVDMYAKRGIMDSALKV 386
Query: 580 VPG------ISWIT-ISGNTHS 594
G ISW ++GNTH+
Sbjct: 387 FEGMIEKDVISWTALVTGNTHN 408
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 185/398 (46%), Gaps = 30/398 (7%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
A R+ Q H I+ +GF N ++ + L+ YA ++ +R + +E +V WNS+I
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI------SKVSGELQDLVYGKLIP 152
G V+ G AL +F GR H D + DD+T+ +I S+ ++ + ++
Sbjct: 302 GCVRQGLIGEALSMF---GRMHERDMKI-DDFTIPSILNCFALSRTEMKIASSAHCLIVK 357
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFA 212
N+++ MY++ G A+KVF+ M +++V S+ +++G G++
Sbjct: 358 -----TGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY- 411
Query: 213 STSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG 272
L+C M+ G D AS+L T ++G+++H +K+G
Sbjct: 412 -DEALKLFC---NMRVGGITPDKIVTASVLSASAELT-LLEFGQQVHGNYIKSGFP---- 462
Query: 273 SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREM 332
S + + +SL+ MY++ L + +F+ M+ R+L WT +I GY +NG EDA M
Sbjct: 463 SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 333 QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS 392
+ G+ P ++ G + ++ ++E+ D +++ A++ K G+
Sbjct: 523 RTVYGITPGPEHYACMIDLFGRSGDFV---KVEQLLHQMEVEPDATVWKAILAASRKHGN 579
Query: 393 LDYASRVFDNVSYFR--DAITWSSMISAYGLHGRGEEA 428
++ R + +A+ + + + Y GR +EA
Sbjct: 580 IENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEA 617
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 211/372 (56%), Gaps = 9/372 (2%)
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
+G++ DA+ ++S + CG + G HC +K G SDV+LGSSL+ +Y S
Sbjct: 114 DGWSFDAYGLSSAVR-SCGLNRDFRTGSGFHCLALKGGFI----SDVYLGSSLVVLYRDS 168
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
++ + +VF++M RN+ WTAMI+G+ Q + L L +M+ K PN + ++
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTAL 227
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRD 408
L AC G L G+ +H + + L + N+LI MY KCG L A R+FD S +D
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN-KD 286
Query: 409 AITWSSMISAYGLHGRGEEAVVTYQKML-QLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
++W+SMI+ Y HG +A+ ++ M+ + G KPD IT + VLS+C +GLV EG +
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
N L+ + +KP + +C+VD+LGR G L +ALE I+ MP+ P +WGSLL + +HG+
Sbjct: 347 N-LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Query: 528 SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
T A L LEP+ + ++ L+N YAS W VR +MK++GLK PG SWI
Sbjct: 406 VWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Query: 588 ISGNTHSFAVGD 599
I+ F D
Sbjct: 466 INNYVFMFKAED 477
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 152/364 (41%), Gaps = 51/364 (14%)
Query: 37 HRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSL 96
+R R H L GF + +L + LV Y SG++ + VF + +NV W ++
Sbjct: 133 NRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAM 192
Query: 97 INGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSX 156
I+G+ + L L+ +M +S P+DYT + L G+ + ++
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSD----PNDYTFTALLSACTGSGALGQGRSVHCQTL 248
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
+NS+++MY +CG+ DA ++FD+ ++V S+N MI+G+A G +
Sbjct: 249 HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG----LAM 304
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
+ F M G DA T +L C G GR+ + ++GL +++
Sbjct: 305 QAIELFELMMPKSGTKPDAITYLGVLS-SCRHAGLVKEGRKFFNLMAEHGLK----PELN 359
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
S L+D+ R G ++AL L+ M MK
Sbjct: 360 HYSCLVDLLGRF-------------------------------GLLQEALELIENMPMK- 387
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA-LIDMYSKCGSLDY 395
PN V S+L +C + G + G I A ++ L D + + L ++Y+ G
Sbjct: 388 ---PNSVIWGSLLFSCRVHGDVWTG--IRAAEERLMLEPDCAATHVQLANLYASVGYWKE 442
Query: 396 ASRV 399
A+ V
Sbjct: 443 AATV 446
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 7/247 (2%)
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
+DG + L S + +C L G H + K D L ++L+ +Y G ++
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
A +VF+ + R+ ++W++MIS + R + + Y KM + P+ T ++LSAC
Sbjct: 173 NAYKVFEEMPE-RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSAC 231
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
+ SG + +G ++ + +K + I ++ M + G L A +
Sbjct: 232 TGSGALGQGRSVHCQTL-HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVS 289
Query: 515 WGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVR---TM 571
W S++ HG +M + ++ P + I+ +S + +V E R +
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELMMPKSGTKP-DAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 572 MKERGLK 578
M E GLK
Sbjct: 349 MAEHGLK 355
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/492 (31%), Positives = 265/492 (53%), Gaps = 57/492 (11%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMP--QRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
+N++ Y+ GE A K+FDE+P +++ + ++S ++ G ++ L+ R
Sbjct: 46 SNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSM--KLFVEMR 103
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG--SDVHLGSSLI 282
R + E D ++ L VC K + ++ H G+ +KMG + V + ++L+
Sbjct: 104 RKRVE---IDDVSVVCLFGVC-AKLEDLGFAQQGH------GVAVKMGVLTSVKVCNALM 153
Query: 283 DMYSR--------------SKKLVLS-----------------RRVFDQMKSRNLYVWTA 311
DMY + +K V+S R VF +M RN WT
Sbjct: 154 DMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTV 213
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV 371
M+ GY+ G + L LL EM + G N V+L S+L ACA G L+VG+ +H ++ K
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKK 273
Query: 372 EL-------NGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR 424
E+ D + AL+DMY+KCG++D + VF + R+ +TW+++ S +HG+
Sbjct: 274 EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF-RLMRKRNVVTWNALFSGLAMHGK 332
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICA 484
G + + +M++ +KPD +T +VLSACS SG+VDEG ++SL Y ++P V+ A
Sbjct: 333 GRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYA 390
Query: 485 CVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE 544
C+VD+LGR+G +++A ++ MP+ P V GSLL + +HG + R L+++ P
Sbjct: 391 CMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPG 450
Query: 545 NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPS 604
N I +SN Y + R D+ +R +++RG++K+PG+S I ++ + H F+ GD++HP
Sbjct: 451 NTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPR 510
Query: 605 SSLIYDMLDDLV 616
+ IY L++++
Sbjct: 511 TKEIYLKLNEVI 522
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 203/453 (44%), Gaps = 59/453 (13%)
Query: 31 LQLTVDHRAHR----LTQQCHAQILTNGFAQNP--FLTTRLVSAYATSGDLNMSRLVFHS 84
++L + H AHR ++ HA + T+G + P +L+ L YA+SG++ ++ +F
Sbjct: 9 VRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDE 68
Query: 85 I---EAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
I E NV W +L++ + + +++ LF EM R V DD ++ + V +
Sbjct: 69 IPLSEKDNVD-WTTLLSSFSRYGLLVNSMKLFVEMRRKR----VEIDDVSVVCLFGVCAK 123
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFD------------- 188
L+DL + + G + N++M MY +CG + ++F+
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 189 ------------------EMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG 230
EMP+RN ++ VM++G+ G FR C G
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFR---C-G 239
Query: 231 YNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGS-----DVHLGSSLIDMY 285
+ + T+ S+L C ++G GR +H Y +K ++ MG DV +G++L+DMY
Sbjct: 240 HGLNFVTLCSMLSA-CAQSGNLVVGRWVHVYALKK--EMMMGEEASYDDVMVGTALVDMY 296
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
++ + S VF M+ RN+ W A+ +G +G + + QM ++P+ ++
Sbjct: 297 AKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFP--QMIREVKPDDLTF 354
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
+VL AC+ G + G + L + ++D+ + G ++ A + +
Sbjct: 355 TAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ + S++ + +HG+ E A ++++Q+
Sbjct: 415 PPNEVVLGSLLGSCSVHGKVEIAERIKRELIQM 447
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 49/360 (13%)
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
M+C Y LL C G+ELH L +GL K +L ++L Y
Sbjct: 1 MKCLSYQK-----VRLLLRHCAHRSFLRPGKELHAVLTTSGL--KKAPRSYLSNALFQFY 53
Query: 286 SRSKKLVLSRRVFDQ--MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+ S ++V ++++FD+ + ++ WT +++ + + G +++ L EM+ K + + V
Sbjct: 54 ASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR-VEIDDV 112
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN- 402
S++ + CA L L +Q H + K+ + + NAL+DMY KCG + R+F+
Sbjct: 113 SVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEEL 172
Query: 403 -----VSYF------------------------RDAITWSSMISAYGLHGRGEEAVVTYQ 433
VS+ R+A+ W+ M++ Y G E +
Sbjct: 173 EEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLA 232
Query: 434 KML-QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMK------PTVEICACV 486
+M+ + G + +T+ S+LSAC++SG + G ++ + + M V + +
Sbjct: 233 EMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTAL 292
Query: 487 VDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNS-MTRDLAYRCLLELEPEN 545
VDM + G +D ++ + M W +L + MHG M D+ + + E++P++
Sbjct: 293 VDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDD 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 135/310 (43%), Gaps = 36/310 (11%)
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG--DTSLFNALIDMYSKCGSLDYASR 398
KV L+ L CA L GK++HA T L + L NAL Y+ G + A +
Sbjct: 7 QKVRLL--LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQK 64
Query: 399 VFDNVSYF-RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+FD + +D + W++++S++ +G ++ + +M + ++ D ++VV + C+K
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKL 124
Query: 458 ---GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
G +G G+ + + +V++C ++DM G+ G + + + L+ V
Sbjct: 125 EDLGFAQQGHGV----AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFE--ELEEKSVV 178
Query: 515 WGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKE 574
+++ +V+ + R R + PE N ++ + A Y EV ++ E
Sbjct: 179 SWTVVLDTVVKWEGLERG---REVFHEMPER--NAVAWTVMVAGYLGAGFTREVLELLAE 233
Query: 575 RGLKKVPGISWITI---------SGN------THSFAVGDKAHPSSSLIYD--MLDDLVA 617
+ G++++T+ SGN H +A+ + YD M+ +
Sbjct: 234 MVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALV 293
Query: 618 IMTDGCADMD 627
M C ++D
Sbjct: 294 DMYAKCGNID 303
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 222/378 (58%), Gaps = 11/378 (2%)
Query: 241 LLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
L V C K + G+++HC++VKNG+ L SD H+ + ++ +Y K L +R+VFD+
Sbjct: 121 FLIVACLKACFFSVGKQIHCWVVKNGVFL---SDGHVQTGVLRIYVEDKLLFDARKVFDE 177
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
+ ++ W ++NGYV+ G + L + +EM ++ G+ P++ S+ + L ACA +G L
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTACAQVGALAQ 236
Query: 361 GKQIHAFSTKVE-LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY 419
GK IH F K + D + AL+DMY+KCG ++ A VF+ ++ R+ +W+++I Y
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR-RNVFSWAALIGGY 295
Query: 420 GLHGRGEEAVVTYQKM-LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
+G ++A ++ + GIKPD + ++ VL+AC+ G ++EG + ++ RY + P
Sbjct: 296 AAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITP 355
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL 538
E +C+VD++ R+G+LD AL+ I+ MP+ P SVWG+LL H N +LA + L
Sbjct: 356 KHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNL 415
Query: 539 LELE----PENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHS 594
L+LE E + + LSN Y S +R +VR M+++RG++K PG S + + G
Sbjct: 416 LDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTK 475
Query: 595 FAVGDKAHPSSSLIYDML 612
F GD +HP+ I+ ++
Sbjct: 476 FVSGDVSHPNLLQIHTLI 493
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 151/326 (46%), Gaps = 16/326 (4%)
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
+ H + +GL + L ++ + + + +K + +FD ++ N +V+ MI
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 316 YVQNGAPEDAL--ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
++ P L LL + ++ + P+ ++ ++ AC VGKQIH + K
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK--- 144
Query: 374 NG----DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAV 429
NG D + ++ +Y + L A +VFD + D + W +++ Y G G E +
Sbjct: 145 NGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ-PDVVKWDVLMNGYVRCGLGSEGL 203
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
+++ML GI+PD +V + L+AC++ G + +G I+ + + ++ V + +VDM
Sbjct: 204 EVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPEN--PS 547
+ G ++ A+E + + S W +L+ +G + A CL +E E+
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFS-WAALIGGYAAYGYAKK---ATTCLDRIEREDGIKP 319
Query: 548 NYISLSNTYASYKRWDVVTEVRTMMK 573
+ + L A+ + E RTM++
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRTMLE 345
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 44 QQCHAQILTNG-FAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
+Q H ++ NG F + + T ++ Y L +R VF I +V W+ L+NGYV+
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLI-PGKSXXXXXX 161
L +F+EM G + PD++++ T ++ L GK I
Sbjct: 196 CGLGSEGLEVFKEM-LVRG---IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
+++ MY++CG A++VF+++ +RNV S+ +I G+A+ G + C
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT----C 307
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE-LHCYLVKNGLDLKMGSDVHLGSS 280
R + +G D+ + +L C G + GR L + G+ K S
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAA-CAHGGFLEEGRTMLENMEARYGITPKHEH----YSC 362
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLY-VWTAMING 315
++D+ R+ +L + + ++M + L VW A++NG
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 244/441 (55%), Gaps = 14/441 (3%)
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFT 237
G+ A +VFDEM + + +N + G+ + + +++M+ G D FT
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVR-----NQLPFESLLLYKKMRDLGVRPDEFT 111
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRV 297
++ + G + G LH ++VK G G + + L+ MY + +L + +
Sbjct: 112 YPFVVKAI-SQLGDFSCGFALHAHVVKYGF----GCLGIVATELVMMYMKFGELSSAEFL 166
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
F+ M+ ++L W A + VQ G AL +M D ++ + +++S+L AC LG
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSACGQLGS 225
Query: 358 LIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMIS 417
L +G++I+ + K E++ + + NA +DM+ KCG+ + A +F+ + R+ ++WS+MI
Sbjct: 226 LEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ-RNVVSWSTMIV 284
Query: 418 AYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR--YQ 475
Y ++G EA+ + M G++P+ +T + VLSACS +GLV+EG ++ ++
Sbjct: 285 GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKN 344
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAY 535
++P E AC+VD+LGRSG L++A EFIK MP++P +WG+LL A +H + +
Sbjct: 345 LEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVA 404
Query: 536 RCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSF 595
L+E P+ S ++ LSN YA+ +WD V +VR+ M++ G KKV S + G H F
Sbjct: 405 DVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFF 464
Query: 596 AVGDKAHPSSSLIYDMLDDLV 616
GDK+HP S IY+ LD+++
Sbjct: 465 NRGDKSHPQSKAIYEKLDEIL 485
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 198/407 (48%), Gaps = 26/407 (6%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
+T L ELL+ + + ++ HA +L GF++ L T+L+ GD+ +R V
Sbjct: 8 LTKQMLSELLRASSS--KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
F + ++LWN+L GYV+N+ +L+L+++M R G V PD++T + K +
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLG---VRPDEFTYPFVVKAISQ 121
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
L D G + A ++ MY + GE A +F+ M +++ ++N
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 202 ISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY 261
++ GN A +F +M + D+FT+ S+L CG+ G + G E++
Sbjct: 182 LAVCVQTGNSAIALE-----YFNKMCADAVQFDSFTVVSMLSA-CGQLGSLEIGEEIYDR 235
Query: 262 LVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGA 321
K +D ++ + ++ +DM+ + +R +F++MK RN+ W+ MI GY NG
Sbjct: 236 ARKEEID----CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 322 PEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL-- 379
+AL L MQ +G+RPN V+ + VL AC+ G + GK+ FS V+ N D +L
Sbjct: 292 SREALTLFTTMQ-NEGLRPNYVTFLGVLSACSHAGLVNEGKRY--FSLMVQSN-DKNLEP 347
Query: 380 ----FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
+ ++D+ + G L+ A + D W +++ A +H
Sbjct: 348 RKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/555 (30%), Positives = 284/555 (51%), Gaps = 36/555 (6%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHS--IEAKNVYLWNSLINGYV 101
+Q H+ ++ GF + L++ Y + + LVF + ++ +N +I+G
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+ +L++FR+M + + P D T + V G G + G +
Sbjct: 269 GFKR-DESLLVFRKMLEA----SLRPTDLTFVS---VMGSCSCAAMGHQVHGLAIKTGYE 320
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGW--ASLGNFASTSGGDL 219
+N+ M MYS +FG A KVF+ + ++++ ++N MIS + A LG A +
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS----- 375
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
++RM G D FT SLL + D + ++K GL S + + +
Sbjct: 376 --VYKRMHIIGVKPDEFTFGSLLAT----SLDLDVLEMVQACIIKFGL----SSKIEISN 425
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL---ILLREMQMKD 336
+LI YS++ ++ + +F++ +NL W A+I+G+ NG P + L L E +++
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR- 484
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
+ P+ +L ++L C L++G Q HA+ + +T + NALI+MYS+CG++ +
Sbjct: 485 -ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDMITVVSVLSACS 455
VF+ +S +D ++W+S+ISAY HG GE AV TY+ M G + PD T +VLSACS
Sbjct: 544 LEVFNQMSE-KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP--S 513
+GLV+EG+ I+NS++ + + V+ +C+VD+LGR+G LD+A +K G
Sbjct: 603 HAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD 662
Query: 514 VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMK 573
VW +L +A HG+ + + L+E E ++PS Y+ LSN YA W E R +
Sbjct: 663 VWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAIN 722
Query: 574 ERGLKKVPGISWITI 588
G K G SW+ +
Sbjct: 723 MIGAMKQRGCSWMRL 737
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 228/483 (47%), Gaps = 59/483 (12%)
Query: 94 NSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPG 153
N + G ++ E +AL LF ++ H + PD Y+++ + L+D ++G +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADV---HRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHC 81
Query: 154 KSXXXXXXXXXXXANSVMAMYSRCG----------------------------EFGD--- 182
+ +N+++++Y R G + GD
Sbjct: 82 YAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEY 141
Query: 183 AMKVFDEMPQR-NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASL 241
A +VFD+MP+R +V +N MI+G G ++ FR M G D F A++
Sbjct: 142 AFEVFDKMPERDDVAIWNAMITGCKESGYHETSVE-----LFREMHKLGVRHDKFGFATI 196
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ- 300
L +C G D+G+++H ++K G + + ++LI MY + +V + VF++
Sbjct: 197 LSMC--DYGSLDFGKQVHSLVIKAGFFIASS----VVNALITMYFNCQVVVDACLVFEET 250
Query: 301 -MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
+ R+ + +I+G + +++L++ R+M ++ +RP ++ +SV+ +C+
Sbjct: 251 DVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKM-LEASLRPTDLTFVSVMGSCSCAA--- 305
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY 419
+G Q+H + K T + NA + MYS A +VF+++ +D +TW++MIS+Y
Sbjct: 306 MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE-KDLVTWNTMISSY 364
Query: 420 GLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
G+ A+ Y++M +G+KPD T S+L+ + L + + + + I ++ +
Sbjct: 365 NQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSK 420
Query: 480 VEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLL 539
+EI ++ ++GQ+++A + + L W ++++ +G + CLL
Sbjct: 421 IEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLL 479
Query: 540 ELE 542
E E
Sbjct: 480 ESE 482
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 217/473 (45%), Gaps = 37/473 (7%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSI-EAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHG 121
T L+SA GD+ + VF + E +V +WN++I G ++ ++ LFREM +
Sbjct: 127 TTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLG- 185
Query: 122 GDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
V D + ATI + + L +GK + N+++ MY C
Sbjct: 186 ---VRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVV 241
Query: 182 DAMKVFDE--MPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
DA VF+E + R+ +FNV+I G A S FR+M T
Sbjct: 242 DACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESL------LVFRKMLEASLRPTDLTFV 295
Query: 240 SLLPVC-CGKTGKWDYGRELHCYLVKNGLDLKMGSDVH--LGSSLIDMYSRSKKLVLSRR 296
S++ C C G ++H GL +K G + + + ++ + MYS + + +
Sbjct: 296 SVMGSCSCAAM-----GHQVH------GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 297 VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLG 356
VF+ ++ ++L W MI+ Y Q + A+ + + M + G++P++ + S+L
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII-GVKPDEFTFGSLLATSL--- 400
Query: 357 GLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMI 416
L V + + A K L+ + NALI YSK G ++ A +F+ S ++ I+W+++I
Sbjct: 401 DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER-SLRKNLISWNAII 459
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIK--PDMITVVSVLSACSKSGLVDEGMGIYNSLITRY 474
S + +G E + + +L+ ++ PD T+ ++LS C + + G + ++
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG 519
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
Q K T+ I +++M + G + +LE M + W SL++A HG
Sbjct: 520 QFKETL-IGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGE 570
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 24 PHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFH 83
+ L LL + V + L Q HA +L +G + + L++ Y+ G + S VF+
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 84 SIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI 135
+ K+V WNSLI+ Y ++ E +A+ ++ M + G V+PD T + +
Sbjct: 549 QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTM-QDEGK--VIPDAATFSAV 597
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 226/435 (51%), Gaps = 15/435 (3%)
Query: 187 FDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCC 246
F QR + + G G G LW G + T A LL C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVG-LLWS-------SGLQVEPETYAVLLQEC- 118
Query: 247 GKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL 306
+ ++ G+ +H + G L + +L L+ +Y+ S L + +F +K R+L
Sbjct: 119 KQRKEYTKGKRIHAQMFVVGFAL----NEYLKVKLLILYALSGDLQTAGILFRSLKIRDL 174
Query: 307 YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA 366
W AMI+GYVQ G ++ L + +M+ ++ + P++ + SV AC+ L L GK+ HA
Sbjct: 175 IPWNAMISGYVQKGLEQEGLFIYYDMR-QNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 367 FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGE 426
K + + + +AL+DMY KC S RVFD +S R+ ITW+S+IS YG HG+
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST-RNVITWTSLISGYGYHGKVS 292
Query: 427 EAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
E + ++KM + G +P+ +T + VL+AC+ GLVD+G + S+ Y ++P + A +
Sbjct: 293 EVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAM 352
Query: 487 VDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENP 546
VD LGR+G+L +A EF+ P P VWGSLL A +HGN +LA LEL+P N
Sbjct: 353 VDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNG 412
Query: 547 SNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSS 606
NY+ +N YAS + ++VR M+ G+KK PG S I + G H F D +H S
Sbjct: 413 GNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSE 472
Query: 607 LIYDMLDDLVAIMTD 621
IY + ++ + D
Sbjct: 473 KIYKKVHEMTSFFMD 487
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 13/270 (4%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
+ P LLQ + + ++ HAQ+ GFA N +L +L+ YA SGDL + ++
Sbjct: 106 VEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGIL 165
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
F S++ +++ WN++I+GYV+ L ++ +M ++ ++PD YT A++ +
Sbjct: 166 FRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNR----IVPDQYTFASVFRACSA 221
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
L L +GK ++++ MY +C F D +VFD++ RNV ++ +
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 281
Query: 202 ISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY 261
ISG+ G + L C F +M+ EG + T +L C G D G E H Y
Sbjct: 282 ISGYGYHGKVSEV----LKC-FEKMKEEGCRPNPVTFLVVL-TACNHGGLVDKGWE-HFY 334
Query: 262 LVKNGLDLKMGSDVHLGSSLIDMYSRSKKL 291
+K D + + ++++D R+ +L
Sbjct: 335 SMKR--DYGIEPEGQHYAAMVDTLGRAGRL 362
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 288/558 (51%), Gaps = 25/558 (4%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H+ I+ G N L T LV Y+ + + V +S ++V+LW S+++G+V+N
Sbjct: 247 HSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRA 306
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
A+ F EM RS G + P+++T + I + ++ L +GK I ++
Sbjct: 307 KEAVGTFLEM-RSLG---LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 167 ANSVMAMYSRCGEFG-DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRR 225
N+++ MY +C +A +VF M NV S+ +I G G D +
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ-----DCFGLLME 417
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGR---ELHCYLVKNGLDLKMGSDVHLGSSLI 282
M + T++ +L C K + R E+H YL++ +D +M +G+SL+
Sbjct: 418 MVKREVEPNVVTLSGVLRAC----SKLRHVRRVLEIHAYLLRRHVDGEMV----VGNSLV 469
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNK 342
D Y+ S+K+ + V MK R+ +T+++ + + G E AL ++ M DG+R ++
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQ 528
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+SL + A A LG L GK +H +S K +G S+ N+L+DMYSKCGSL+ A +VF+
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
++ D ++W+ ++S +G A+ +++M +PD +T + +LSACS L D
Sbjct: 589 IAT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G+ + + Y ++P VE +V +LGR+G+L++A ++ M L P ++ +LL A
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
Query: 523 VMHGN-SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
GN S+ D+A + L L P +P+ YI L++ Y + ++ + R +M E+ L K
Sbjct: 708 RYRGNLSLGEDMANKG-LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKL 766
Query: 582 GISWITISGNTHSFAVGD 599
G S + + G HSF D
Sbjct: 767 GKSTVEVQGKVHSFVSED 784
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 238/476 (50%), Gaps = 27/476 (5%)
Query: 36 DHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNS 95
+ + R+ H ++ G +N L L+S Y + + +R +F + + V+ W
Sbjct: 35 ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTV 94
Query: 96 LINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKS 155
+I+ + K++EF AL LF EM S P+++T +++ + L+D+ YG + G
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASG----THPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS 215
+S+ +YS+CG+F +A ++F + + S+ +MIS S
Sbjct: 151 IKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS---------SLV 201
Query: 216 GGDLW----CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKM 271
G W F+ M G + FT LL ++G+ +H ++ G+ L
Sbjct: 202 GARKWREALQFYSEMVKAGVPPNEFTFVKLLG--ASSFLGLEFGKTIHSNIIVRGIPL-- 257
Query: 272 GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLRE 331
+V L +SL+D YS+ K+ + RV + +++++WT++++G+V+N ++A+ E
Sbjct: 258 --NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 332 MQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCG 391
M+ G++PN + ++L C+ + L GKQIH+ + KV T + NAL+DMY KC
Sbjct: 316 MR-SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCS 374
Query: 392 SLDY-ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
+ + ASRVF + + ++W+++I HG ++ +M++ ++P+++T+ V
Sbjct: 375 ASEVEASRVFGAMVS-PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGV 433
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
L ACSK V + I+ L+ R+ V + +VD S ++D A I+ M
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGEMV-VGNSLVDAYASSRKVDYAWNVIRSM 488
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 144/361 (39%), Gaps = 49/361 (13%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLI 97
R R + HA +L + LV AYA+S ++ + V S++ ++ + SL+
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500
Query: 98 NGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXX 157
+ + + AL + M GD + D +L S L L GK + S
Sbjct: 501 TRFNELGKHEMALSVINYM----YGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
NS++ MYS+CG DA KVF+E+ +V S+N ++SG AS G +S
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
F M+ + D+ T LL C GR L GL+
Sbjct: 617 -----FEEMRMKETEPDSVTFLILLSACSN-------GR-----LTDLGLEY-------- 651
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
+ +++++ YV I G + G E+A ++ M +K
Sbjct: 652 -------------FQVMKKIYNIEPQVEHYVHLVGILG--RAGRLEEATGVVETMHLK-- 694
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
PN + ++L AC G L +G+ + A D +L+ L D+Y + G + A
Sbjct: 695 --PNAMIFKTLLRACRYRGNLSLGEDM-ANKGLALAPSDPALYILLADLYDESGKPELAQ 751
Query: 398 R 398
+
Sbjct: 752 K 752
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 240/415 (57%), Gaps = 21/415 (5%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSF--NVMISGWASLGNFASTSGGDLWCFFR 224
++ ++ +Y+ CG A +VFD M +R+ F N +ISG+A LG + D +
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYE-----DAMALYF 184
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
+M +G D FT +L CG G G +H LVK G G DV++ ++L+ M
Sbjct: 185 QMAEDGVKPDRFTFPRVLK-ACGGIGSVQIGEAIHRDLVKEGF----GYDVYVLNALVVM 239
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
Y++ +V +R VFD + ++ W +M+ GY+ +G +AL + R M +++G+ P+KV+
Sbjct: 240 YAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM-VQNGIEPDKVA 298
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
+ SVL A + G+Q+H + + + + S+ NALI +YSK G L A +FD +
Sbjct: 299 ISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM- 354
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
RD ++W+++ISA H + + +++M + KPD IT VSVLS C+ +G+V++G
Sbjct: 355 LERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGE 411
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI-KGMPLDPGPSVWGSLLTASV 523
+++ + Y + P +E AC+V++ GR+G +++A I + M L+ GP+VWG+LL A
Sbjct: 412 RLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACY 471
Query: 524 MHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
+HGN+ ++A + L ELEP+N N+ L Y+ KR + V VR MM +RGL+
Sbjct: 472 LHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 206/436 (47%), Gaps = 32/436 (7%)
Query: 16 TSATAFIT---PHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATS 72
TSA I+ P LL+ RA + H I N ++++LV YA+
Sbjct: 81 TSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASC 140
Query: 73 GDLNMSRLVFHSIEAKNV--YLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDY 130
G ++ VF + ++ + WNSLI+GY + ++ A+ L+ +M D V PD +
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE----DGVKPDRF 196
Query: 131 TLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM 190
T + K G + + G+ I N+++ MY++CG+ A VFD +
Sbjct: 197 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 256
Query: 191 PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG 250
P ++ S+N M++G+ G FR M G D I+S+L +
Sbjct: 257 PHKDYVSWNSMLTGYLHHGLLHEALD-----IFRLMVQNGIEPDKVAISSVL----ARVL 307
Query: 251 KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWT 310
+ +GR+LH ++++ G++ ++ + ++LI +YS+ +L + +FDQM R+ W
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELS----VANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
A+I+ + +N + L +M + +P+ ++ +SVL CA G + G+++ + +K
Sbjct: 364 AIISAHSKNS---NGLKYFEQMHRANA-KPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 371 VELNGDTSL--FNALIDMYSKCGSLDYA-SRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
E D + + ++++Y + G ++ A S + + W +++ A LHG +
Sbjct: 420 -EYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDI 478
Query: 428 AVVTYQKMLQLGIKPD 443
V Q++ +L +PD
Sbjct: 479 GEVAAQRLFEL--EPD 492
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
S+L C L + G ++H L + + + L+ +Y+ CG + A VFD +S
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK- 155
Query: 407 RDA--ITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
RD+ W+S+IS Y G+ E+A+ Y +M + G+KPD T VL AC G V G
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
I+ L+ + V + +V M + G + +A +P S W S+LT +
Sbjct: 216 AIHRDLV-KEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS-WNSMLTGYLH 273
Query: 525 HG 526
HG
Sbjct: 274 HG 275
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 274/532 (51%), Gaps = 23/532 (4%)
Query: 32 QLTVDHRAHRLT---QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
+L D R+ R T + H ++ G ++ F ++L+ A+++ D+ + +F +
Sbjct: 30 KLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNT 88
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
N++++N++I GY + E A +F ++ R+ G + D ++ T K + G
Sbjct: 89 NLFMFNTMIRGYSISDEPERAFSVFNQL-RAKG---LTLDRFSFITTLKSCSRELCVSIG 144
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR-NVGSFNVMISGWAS 207
+ + G + N+++ Y CG+ DA KVFDEMPQ + +F+ +++G+
Sbjct: 145 EGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 208 LGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL 267
+ A FR M+ + T+ S L G H +K GL
Sbjct: 205 VSKKALALD-----LFRIMRKSEVVVNVSTLLSFLSAI-SDLGDLSGAESAHVLCIKIGL 258
Query: 268 DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALI 327
DL D+HL ++LI MY ++ + +RR+FD +++ W MI+ Y + G E+ +
Sbjct: 259 DL----DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMY 387
LLR+M+ + M+PN + + +L +CA VG+ + + + D L AL+DMY
Sbjct: 315 LLRQMKY-EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMY 373
Query: 388 SKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ--LGIKPDMI 445
+K G L+ A +F+ + +D +W++MIS YG HG EAV + KM + ++P+ I
Sbjct: 374 AKVGLLEKAVEIFNRMKD-KDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI 432
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKG 505
T + VL+ACS GLV EG+ + ++ Y P VE CVVD+LGR+GQL++A E I+
Sbjct: 433 TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN 492
Query: 506 MPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 557
+P+ + W +LL A ++GN+ + L E+ +P++ I L+ T+A
Sbjct: 493 LPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHA 544
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 4/208 (1%)
Query: 2 VLRKTFTLTTSRYHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFL 61
V +K L R + + LL L D + H + G + L
Sbjct: 205 VSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHL 264
Query: 62 TTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHG 121
T L+ Y +G ++ +R +F K+V WN +I+ Y K + L R+M
Sbjct: 265 ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK- 323
Query: 122 GDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFG 181
+ P+ T + + G+ + +++ MY++ G
Sbjct: 324 ---MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLG 209
A+++F+ M ++V S+ MISG+ + G
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHG 408
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 272/553 (49%), Gaps = 63/553 (11%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLV--SAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
R +Q HA ++ NG N + L+ ++ + G L + +F I +V + N ++
Sbjct: 26 RTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLR 85
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX 158
G ++ + + L+ EM + V PD YT + K +L+ G GK
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRG----VSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 159 XXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGD 218
N+++ ++ CG+ G A ++FD+ + + +++ M SG+A
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA------------ 189
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
K GK D L D D
Sbjct: 190 -----------------------------KRGKIDEAMRL--------FDEMPYKDQVAW 212
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
+ +I + K++ +R +FD+ +++ W AMI+GYV G P++AL + +EM+ G
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR-DAGE 271
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAF-----STKVELNGDTSLFNALIDMYSKCGSL 393
P+ V+++S+L ACA+LG L GK++H + S + T ++NALIDMY+KCGS+
Sbjct: 272 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 331
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
D A VF V RD TW+++I LH E ++ +++M +L + P+ +T + V+ A
Sbjct: 332 DRAIEVFRGVKD-RDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILA 389
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS 513
CS SG VDEG ++ + Y ++P ++ C+VDMLGR+GQL++A F++ M ++P
Sbjct: 390 CSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAI 449
Query: 514 VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMK 573
VW +LL A ++GN A LL + + +Y+ LSN YAS +WD V +VR M
Sbjct: 450 VWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFD 509
Query: 574 ERGLKKVPGISWI 586
+ +KK G+S I
Sbjct: 510 DTRVKKPTGVSLI 522
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 290/605 (47%), Gaps = 43/605 (7%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV--FHSIEAKNVYLWNSLINGYVK 102
Q H I+ +GF + F++ L+S Y + ++ F I ++V WN++++ VK
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+ A LF EM R G D +TL+T+ + L+ G+ + G++
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGV---DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FASTS 215
N+++ YS+ + +++ M ++ +F MI+ + S G FA+ +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 216 GGDL---------WC----------FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGR 256
+ +C F M G F++ S + C G +
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC-GLVSEKKVSE 437
Query: 257 ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL---YVWTAMI 313
++H + +K G + + ++L+DM +R +++ + +FDQ S NL T++I
Sbjct: 438 QIHGFCIKFG----TAFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSII 492
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
GY +NG P+ A+ L + + ++VSL +L C LG +G QIH ++ K
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 374 NGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQ 433
D SL N+LI MY+KC D A ++F+ + D I+W+S+IS Y L G+EA+ +
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMRE-HDVISWNSLISCYILQRNGDEALALWS 611
Query: 434 KMLQLGIKPDMITVVSVLSAC--SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLG 491
+M + IKPD+IT+ V+SA ++S + ++ S+ T Y ++PT E V +LG
Sbjct: 612 RMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLG 671
Query: 492 RSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYIS 551
G L++A + I MP+ P SV +LL + +H N+ + +L +PE PS YI
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 552 LSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDM 611
SN Y++ W +R M+ERG +K P SWI HSF D +HP IY
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRG 791
Query: 612 LDDLV 616
L+ L+
Sbjct: 792 LEILI 796
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 228/534 (42%), Gaps = 53/534 (9%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
LL+L+ + +T+ HA L + L L+S Y G + LVF S+ +
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 90 VYLWNSLINGYVK-NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
V + +LI+G+ + N E V FR R G V P++YT I + G
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFR--MRKAG--LVQPNEYTFVAILTACVRVSRFSLG 200
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSR--CGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
I G +NS+M++Y + D +K+FDE+PQR+V S+N ++S
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG 266
G S DL F+ + EG+ D+FT+++LL C + GRELH ++ G
Sbjct: 261 KEGK--SHKAFDL--FYEMNRVEGFGVDSFTLSTLLS-SCTDSSVLLRGRELHGRAIRIG 315
Query: 267 L---------------------------DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
L ++ M D + +I Y + + +F
Sbjct: 316 LMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFA 375
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
+ +N + A++ G+ +NG AL L +M ++ G+ SL S + AC L+
Sbjct: 376 NVTEKNTITYNALMAGFCRNGHGLKALKLFTDM-LQRGVELTDFSLTSAVDACGLVSEKK 434
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN-VSYFRDAITWSSMISA 418
V +QIH F K + + AL+DM ++C + A +FD S + +S+I
Sbjct: 435 VSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGG 494
Query: 419 YGLHGRGEEAVVTYQKML-QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMK 477
Y +G ++AV + + L + + D +++ +L+ C G + G I+ Y +K
Sbjct: 495 YARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHC-----YALK 549
Query: 478 P----TVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
+ + ++ M + D A++ M S W SL++ ++ N
Sbjct: 550 AGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVIS-WNSLISCYILQRN 602
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 242/470 (51%), Gaps = 52/470 (11%)
Query: 182 DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG-DLWCFFRRMQCEGYNADAFTIAS 240
+A KVFDE+P+ +V IS A +G F S + F+R+ C G + FT +
Sbjct: 45 NAHKVFDEIPELDV------ISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 241 LLPVCCGKTGKWDY--GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
++ T D G++LHCY +K GL S+V +GS++++ Y + L +RR F
Sbjct: 99 VIG---SSTTSRDVKLGKQLHCYALKMGL----ASNVFVGSAVLNCYVKLSTLTDARRCF 151
Query: 299 DQ-------------------------------MKSRNLYVWTAMINGYVQNGAPEDALI 327
D M R++ W A+I G+ Q G E+A+
Sbjct: 152 DDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVN 211
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK-VELNGDTSLFNALIDM 386
+M + + PN+ + + A + + GK IHA + K + + ++N+LI
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISF 271
Query: 387 YSKCGSLDYASRVFDNVSYF-RDAITWSSMISAYGLHGRGEEAVVTYQKMLQ-LGIKPDM 444
YSKCG+++ + F+ + R+ ++W+SMI Y +GRGEEAV ++KM++ ++P+
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNN 331
Query: 445 ITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI--CACVVDMLGRSGQLDQALEF 502
+T++ VL AC+ +GL+ EG +N + Y +E+ AC+VDML RSG+ +A E
Sbjct: 332 VTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 503 IKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRW 562
IK MPLDPG W +LL +H N LA +LEL+P + S+Y+ LSN Y++ + W
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENW 451
Query: 563 DVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
V+ +R MKE GLK+ G SWI + F DK + +Y ML
Sbjct: 452 QNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 23/262 (8%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
T L+S Y + + +F ++ ++V WN++I G+ + A+ F +M R
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE--- 219
Query: 123 DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGEFG 181
V+P++ T + GK I + NS+++ YS+CG
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 182 DAMKVFD--EMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM-QCEGYNADAFTI 238
D++ F+ E QRN+ S+N MI G+A G G + F +M + + TI
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR-----GEEAVAMFEKMVKDTNLRPNNVTI 334
Query: 239 ASLLPVCCG----KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
+L C + G + + ++ Y N L+L+ H + ++DM SRS + +
Sbjct: 335 LGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELE-----HY-ACMVDMLSRSGRFKEA 388
Query: 295 RRVFDQMK-SRNLYVWTAMING 315
+ M + W A++ G
Sbjct: 389 EELIKSMPLDPGIGFWKALLGG 410
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 244/462 (52%), Gaps = 16/462 (3%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLIN 98
A R + HA + NG + FL T LV Y G + ++R VF I +++ +W ++I
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 99 GYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXX 158
G N+ AL LFR M + + P+ L TI V G+++ L GK +
Sbjct: 289 GLAHNKRQWEALGLFRTMI---SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 159 XXXXXXXXANS-VMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGG 217
+S ++ +Y +CG+ +VF QRN S+ ++SG+A+ G F
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
+W MQ EG+ D TIA++LPVC + G+E+HCY +KN L L +V L
Sbjct: 406 IVW-----MQQEGFRPDVVTIATVLPVC-AELRAIKQGKEIHCYALKN-LFL---PNVSL 455
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
+SL+ MYS+ R+FD+++ RN+ WTAMI+ YV+N + + R M +
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
RP+ V++ VL C+ L L +GK++H K E + +I MY KCG L A+
Sbjct: 516 -RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
FD V+ + ++TW+++I AYG + +A+ +++M+ G P+ T +VLS CS++
Sbjct: 575 FSFDAVA-VKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQA 633
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
G VDE +N ++ Y ++P+ E + V+++L R G++++A
Sbjct: 634 GFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 232/480 (48%), Gaps = 33/480 (6%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
LL+ V ++ +Q H I NG N FL T+LV Y G + ++ VF + N
Sbjct: 117 LLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSN 176
Query: 90 VYLWNSLINGYV--KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVY 147
VY WN+L+ G V + + L F EM R G D + Y+L+ + K L
Sbjct: 177 VYSWNALLRGTVISGKKRYQDVLSTFTEM-RELGVDL---NVYSLSNVFKSFAGASALRQ 232
Query: 148 GKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG--- 204
G + S++ MY +CG+ G A +VFDE+ +R++ + MI+G
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 205 ----WASLGNFASTSGGDLWCFFRRM-QCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
W +LG FR M E ++ + ++LPV G G+E+H
Sbjct: 293 NKRQWEALG------------LFRTMISEEKIYPNSVILTTILPV-LGDVKALKLGKEVH 339
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
+++K+ ++ VH G LID+Y + + RRVF K RN WTA+++GY N
Sbjct: 340 AHVLKSKNYVEQ-PFVHSG--LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAAN 396
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
G + AL + MQ ++G RP+ V++ +VLP CA L + GK+IH ++ K + SL
Sbjct: 397 GRFDQALRSIVWMQ-QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 380 FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
+L+ MYSKCG +Y R+FD + R+ W++MI Y + + ++ ML
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQ-RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
+PD +T+ VL+ CS + G ++ ++ + + + + A ++ M G+ G L A
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKK-EFESIPFVSARIIKMYGKCGDLRSA 573
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 18/258 (6%)
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
+ S+N Y+ I + + E AL +L ++ + G+ N + ++L AC L+
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQR-GIPVNATTFSALLEACVRRKSLLH 129
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
GKQ+H L + L L+ MY+ CGS+ A +VFD S + +W++++
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDE-STSSNVYSWNALLRGTV 188
Query: 421 LHG--RGEEAVVTYQKMLQLGIKPDMITVVSVLSACS-----KSGLVDEGMGIYNSLITR 473
+ G R ++ + T+ +M +LG+ ++ ++ +V + + + GL + I N L
Sbjct: 189 ISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS 248
Query: 474 YQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDL 533
+K + +VDM + G++ A + ++ VWG+++ A + H L
Sbjct: 249 VFLKTS------LVDMYFKCGKVGLARRVFDEI-VERDIVVWGAMI-AGLAHNKRQWEAL 300
Query: 534 A-YRCLLELEPENPSNYI 550
+R ++ E P++ I
Sbjct: 301 GLFRTMISEEKIYPNSVI 318
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 29 ELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
+L + D +A +L ++ H IL F PF++ R++ Y GDL + F ++ K
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVK 583
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREM 116
W ++I Y N F A+ F +M
Sbjct: 584 GSLTWTAIIEAYGCNELFRDAINCFEQM 611
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 271/525 (51%), Gaps = 21/525 (4%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
L+S Y +G ++ + +FH + NV WN LI+G+V ++ AL M R +
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV-DKGSPRALEFLVRMQR----EG 233
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
++ D + L K L GK + ++++ MYS CG A
Sbjct: 234 LVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 185 KVFDEMP---QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASL 241
VF + +V +N M+SG+ + LW + Q + D++T++
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSGFL----INEENEAALWLLLQIYQSD-LCFDSYTLSGA 348
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
L +C G ++H +V +G +L D +GS L+D+++ + + ++F ++
Sbjct: 349 LKICINYV-NLRLGLQVHSLVVVSGYEL----DYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
++++ ++ +I G V++G A L RE+ +K G+ ++ + ++L C+ L L G
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFREL-IKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
KQIH K + AL+DMY KCG +D +FD + RD ++W+ +I +G
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQ 521
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
+GR EEA + KM+ +GI+P+ +T + +LSAC SGL++E ++ + Y ++P +E
Sbjct: 522 NGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLE 581
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLEL 541
CVVD+LG++G +A E I MPL+P ++W SLLTA H N+ + LL+
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKG 641
Query: 542 EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWI 586
P++PS Y SLSN YA+ WD +++VR K+ G K+ G+SWI
Sbjct: 642 FPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 228/504 (45%), Gaps = 53/504 (10%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLI 97
+A + + A ++ G +QN F+ ++S Y L+ + VF + +N+ W +++
Sbjct: 19 QAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMV 78
Query: 98 NGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD-----LVY----- 147
+GY + + A+ L+R M S +++ + + K G + D LVY
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEA---ANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 148 --------------------GKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGEFGDAMKV 186
G+LI S + N++++ Y + G +A+ +
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 187 FDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCC 246
F MPQ NV S+N +ISG+ G+ + F RMQ EG D F + L C
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKGSPRALE------FLVRMQREGLVLDGFALPCGLKA-C 248
Query: 247 GKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK---S 303
G G++LHC +VK+GL+ S S+LIDMYS L+ + VF Q K +
Sbjct: 249 SFGGLLTMGKQLHCCVVKSGLE----SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 304 RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ 363
++ VW +M++G++ N E AL LL ++ D + + +L L C L +G Q
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSD-LCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 364 IHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHG 423
+H+ D + + L+D+++ G++ A ++F + +D I +S +I G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRGCVKSG 422
Query: 424 RGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR-YQMKPTVEI 482
A ++++++LG+ D V ++L CS + G I+ I + Y+ +P
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT-- 480
Query: 483 CACVVDMLGRSGQLDQALEFIKGM 506
+VDM + G++D + GM
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGM 504
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 180/402 (44%), Gaps = 47/402 (11%)
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
G++Q G+ I AN+V++MY DA KVFDEM +RN+ ++
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
M+SG+ S G + + R + E A+ F +++L CG G G ++
Sbjct: 76 TMVSGYTSDGK----PNKAIELYRRMLDSEEEAANEFMYSAVLKA-CGLVGDIQLGILVY 130
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR----------------------- 296
+ K L DV L +S++DMY ++ +L+ +
Sbjct: 131 ERIGKENLR----GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 297 --------VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+F +M N+ W +I+G+V G+P AL L MQ ++G+ + +L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQ-REGLVLDGFALPCG 244
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF--DNVSYF 406
L AC+ G L +GKQ+H K L +ALIDMYS CGSL YA+ VF + ++
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
W+SM+S + ++ E A+ ++ Q + D T+ L C + G+ +
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 467 YN-SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP 507
++ +++ Y++ V + +VD+ G + A + +P
Sbjct: 365 HSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHRLP 404
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 246 CGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRN 305
CGK + G + +++K G+ +V + +++I MY + L + +VFD+M RN
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGIS----QNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 306 LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH 365
+ WT M++GY +G P A+ L R M + N+ +VL AC L+G + +G ++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 366 AFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAIT-WSSMISAYGLHGR 424
K L GD L N+++DMY K G L A+ F + R + T W+++IS Y G
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI--LRPSSTSWNTLISGYCKAGL 188
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTV 480
+EAV + +M Q P++++ C SG VD+G + R Q + V
Sbjct: 189 MDEAVTLFHRMPQ----PNVVS-----WNCLISGFVDKGSPRALEFLVRMQREGLV 235
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 31 LQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNV 90
L++ +++ RL Q H+ ++ +G+ + + + LV +A G++ + +FH + K++
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 91 YLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKL 150
++ LI G VK+ A LFRE+ + G D D + ++ I KV L L +GK
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKL-GLD---ADQFIVSNILKVCSSLASLGWGKQ 464
Query: 151 IPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN 210
I G A +++ MY +CGE + + +FD M +R+V S+ +I G+ G
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGR 524
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVC 245
+ + +F +M G + T LL C
Sbjct: 525 VE-----EAFRYFHKMINIGIEPNKVTFLGLLSAC 554
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 257/466 (55%), Gaps = 36/466 (7%)
Query: 173 MYSRCG--EFGD---AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL-WCFFRRM 226
+ RC FGD A+++F +P+ +N +I G FA +S L + ++R M
Sbjct: 41 LLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRG------FAGSSHPSLAFSWYRSM 94
Query: 227 QCEGY------NADAFTIASLLPVCCGK--TGKWDYGRELHCYLVKNGLDLKMGSDVHLG 278
+ DA T + L C + D +LHC + + GL +D L
Sbjct: 95 LQQSSSSSAICRVDALTCSFTLKACARALCSSAMD---QLHCQINRRGL----SADSLLC 147
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
++L+D YS++ L+ + ++FD+M R++ W A+I G V +A+ L + M+ +G+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMET-EGI 206
Query: 339 RPNKVSLISVLPACALLGGLIVGKQI-HAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
R ++V++++ L AC+ LG + G+ I H +S N + + NA IDMYSKCG +D A
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAY 261
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+VF+ + + +TW++MI+ + +HG A+ + K+ GIKPD ++ ++ L+AC +
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGS 517
GLV+ G+ ++N++ + ++ ++ CVVD+L R+G+L +A + I M + P P +W S
Sbjct: 322 GLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 518 LLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
LL AS ++ + ++A R + E+ N +++ LSN YA+ RW V VR M+ + +
Sbjct: 381 LLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
Query: 578 KKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL-VAIMTDG 622
KK+PG+S+I G H F DK+H IY+ +D++ I DG
Sbjct: 441 KKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDG 486
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H QI G + + L T L+ AY+ +GDL + +F + ++V WN+LI G V
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK-LIPGKSXXXXXXXX 163
A+ L++ M + G + + T+ L D+ G+ + G S
Sbjct: 190 RASEAMELYKRM-ETEG---IRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDN 240
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMP-QRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
+N+ + MYS+CG A +VF++ +++V ++N MI+G+A G
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE-----I 295
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F +++ G D + + L C G +YG + + G++ M H G ++
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTA-CRHAGLVEYGLSVFNNMACKGVERNMK---HYG-CVV 350
Query: 283 DMYSRSKKL 291
D+ SR+ +L
Sbjct: 351 DLLSRAGRL 359
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 279/569 (49%), Gaps = 60/569 (10%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
+V Y S L + +F + ++ + +LI GY +N ++ A+ LFREM R+ G
Sbjct: 113 MVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM-RNLG--- 168
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
++ ++ TLAT+ L + +++ + + +++ MY C DA
Sbjct: 169 IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDAR 228
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGN-------FASTSGGDL--W--------------- 220
K+FDEMP+RN+ ++NVM++G++ G F + D+ W
Sbjct: 229 KLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDE 288
Query: 221 --CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL--------- 269
++ M G + LL G G +LH +VK G D
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGS-SKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 270 ---KMGSDVHLG---------------SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTA 311
+ +D+ L ++LI + ++ + +R VFDQ ++++ W A
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV 371
MI+GY Q+ +P+ AL L REM ++P+ ++++SV A + LG L GK+ H +
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAIT--WSSMISAYGLHGRGEEAV 429
+ + +L A+IDMY+KCGS++ A +F + W+++I HG + A+
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Query: 430 VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
Y + L IKP+ IT V VLSAC +GLV+ G + S+ + + ++P ++ C+VD+
Sbjct: 528 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
LG++G+L++A E IK MP+ +WG LL+AS HGN +LA L ++P +
Sbjct: 588 LGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCK 647
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLK 578
+ LSN YA RW+ V VR M+ R ++
Sbjct: 648 VMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 40/379 (10%)
Query: 246 CGKTGKWDYGRELHCYLVKNGLD---------LKMGSDVHLGSS---------------- 280
C + GR++HC ++K+GLD L M + L +
Sbjct: 51 CASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASF 110
Query: 281 --LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
++D Y RS++L + ++FD M R+ +T +I GY QN +A+ L REM+ G+
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR-NLGI 169
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
N+V+L +V+ AC+ LGG+ + + + + K++L G + L+ MY C L A +
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
+FD + R+ +TW+ M++ Y G E+A + ++ + D+++ +++ C +
Sbjct: 230 LFDEMPE-RNLVTWNVMLNGYSKAGLIEQAEELFDQITE----KDIVSWGTMIDGCLRKN 284
Query: 459 LVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSL 518
+DE + Y ++ R MKP+ + ++ RS + L+ + G + G +
Sbjct: 285 QLDEALVYYTEML-RCGMKPSEVMMVDLLSASARSVGSSKGLQ-LHGTIVKRGFDCY-DF 341
Query: 519 LTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
L A+++H +++ D+ L + E + S + A + + +V + R + + K
Sbjct: 342 LQATIIHFYAVSNDIKL-ALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK 400
Query: 579 KVPGISW-ITISGNTHSFA 596
+ SW ISG S +
Sbjct: 401 DI--FSWNAMISGYAQSLS 417
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 30/145 (20%)
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKC------------- 390
+L+S L +CA + G+QIH K L+ + + N++++MY+KC
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 391 GSLDYAS------------RVFDNVSYF-----RDAITWSSMISAYGLHGRGEEAVVTYQ 433
LD AS R++D + F R ++++++I Y + + EA+ ++
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 434 KMLQLGIKPDMITVVSVLSACSKSG 458
+M LGI + +T+ +V+SACS G
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLG 187
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 276/577 (47%), Gaps = 59/577 (10%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HAQ++ GF + F T LVS Y + + V + + + N+ ++G ++N
Sbjct: 54 HAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN--- 110
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
G FR G + V T++ V G D+ G + +
Sbjct: 111 GFCRDAFRMFGDAR----VSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYV 166
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG--NFASTSGGDLWCFFR 224
S+++MYSRCGE+ A ++F+++P ++V ++N ISG G N + ++ R
Sbjct: 167 GTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPS----VFNLMR 222
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
+ E N F A C YGR+LH ++K + +G++LIDM
Sbjct: 223 KFSSEEPNDVTFVNAI---TACASLLNLQYGRQLHGLVMKKEFQF----ETMVGTALIDM 275
Query: 285 YSRSKKLVLSRRVFDQMK-SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
YS+ + + VF ++K +RNL W ++I+G + NG E A+ L ++ +G++P+
Sbjct: 276 YSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD-SEGLKPDSA 334
Query: 344 S-----------------------------------LISVLPACALLGGLIVGKQIHAFS 368
+ L S+L AC+ + L GK+IH
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS-YFRDAITWSSMISAYGLHGRGEE 427
K D + +LIDMY KCG +A R+FD +D + W+ MIS YG HG E
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVV 487
A+ ++ + + ++P + T +VLSACS G V++G I+ + Y KP+ E C++
Sbjct: 455 AIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMI 514
Query: 488 DMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPS 547
D+LGRSG+L +A E I M SLL + H + + + A L ELEPENP+
Sbjct: 515 DLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPA 573
Query: 548 NYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGIS 584
++ LS+ YA+ +RW+ V +R ++ ++ L K+PG+S
Sbjct: 574 PFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 184/346 (53%), Gaps = 13/346 (3%)
Query: 127 PDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKV 186
P+ +T + K +L D+V G+++ + A ++++MY + + DA+KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 187 FDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCC 246
DEMP+R + S N +SG G F D + F + G ++ T+AS+L
Sbjct: 89 LDEMPERGIASVNAAVSGLLENG-FCR----DAFRMFGDARVSGSGMNSVTVASVL---- 139
Query: 247 GKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL 306
G G + G +LHC +K+G ++ +V++G+SL+ MYSR + VL+ R+F+++ +++
Sbjct: 140 GGCGDIEGGMQLHCLAMKSGFEM----EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSV 195
Query: 307 YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA 366
+ A I+G ++NG + M+ PN V+ ++ + ACA L L G+Q+H
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 367 FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGE 426
K E +T + ALIDMYSKC A VF + R+ I+W+S+IS ++G+ E
Sbjct: 256 LVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
Query: 427 EAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLIT 472
AV ++K+ G+KPD T S++S S+ G V E + +++
Sbjct: 316 TAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 171/397 (43%), Gaps = 51/397 (12%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
Q H + +GF ++ T LVS Y+ G+ ++ +F + K+V +N+ I+G ++N
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
+F M + + P+D T L +L YG+ + G
Sbjct: 210 VMNLVPSVFNLMRKFSSEE---PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQ-RNVGSFNVMISG------------------- 204
+++ MYS+C + A VF E+ RN+ S+N +ISG
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 205 ---------WASLGNFASTSGG--DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWD 253
W SL + S G + + FF RM + SLL C + W
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSAC---SDIWT 383
Query: 254 Y--GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM--KSRNLYVW 309
G+E+H +++K + D+ + +SLIDMY + +RR+FD+ K ++ W
Sbjct: 384 LKNGKEIHGHVIKAAAE----RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
MI+GY ++G E A+ + E+ ++ + P+ + +VL AC+ G + G QI F
Sbjct: 440 NVMISGYGKHGECESAIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI--FRL 496
Query: 370 KVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNV 403
E G T +ID+ + G L A V D +
Sbjct: 497 MQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 261/540 (48%), Gaps = 54/540 (10%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
+ +V Y G + +R +F + +NV W ++I+GY K F LF M + G
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE--G 269
Query: 123 DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGD 182
D V + TLA + K + G I G NS+M+MYS+ G G+
Sbjct: 270 D-VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A VF M ++ S+N +I+G +R Q ++A+ + +
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITG-----------------LVQRKQI----SEAYELFEKM 367
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
P G D+ + +I +S ++ +F M
Sbjct: 368 P----------------------------GKDMVSWTDMIKGFSGKGEISKCVELFGMMP 399
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
++ WTAMI+ +V NG E+AL +M K+ + PN + SVL A A L LI G
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE-VCPNSYTFSSVLSATASLADLIEGL 458
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
QIH K+ + D S+ N+L+ MY KCG+ + A ++F +S + +++++MIS Y +
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE-PNIVSYNTMISGYSYN 517
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI 482
G G++A+ + + G +P+ +T +++LSAC G VD G + S+ + Y ++P +
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577
Query: 483 CACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELE 542
AC+VD+LGRSG LD A I MP P VWGSLL+AS H +LA + L+ELE
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637
Query: 543 PENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAH 602
P++ + Y+ LS Y+ + + + K + +KK PG SWI + G H+F GD++
Sbjct: 638 PDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 234/565 (41%), Gaps = 84/565 (14%)
Query: 17 SATAFITPHNLLELLQLTVDHRAHR-LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDL 75
S I HN+ T+ H +TQ+ + T + F +S +A +G+L
Sbjct: 7 SNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNL 66
Query: 76 NMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI 135
+ +F + +++ W ++I+ Y +N + A +F EM P T +
Sbjct: 67 QEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM----------PVRVTTS-- 114
Query: 136 SKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNV 195
Y +I AM + G A ++F ++P++N
Sbjct: 115 -----------YNAMIT-------------------AMIKNKCDLGKAYELFCDIPEKNA 144
Query: 196 GSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYG 255
S+ MI+G+ G F F + D+ LL + GKW+
Sbjct: 145 VSYATMITGFVRAGRFDEAE-------FLYAETPVKFRDSVASNVLLSGYL-RAGKWN-- 194
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
V G+ +K +V SS++ Y + ++V +R +FD+M RN+ WTAMI+G
Sbjct: 195 ---EAVRVFQGMAVK---EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDG 248
Query: 316 YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG 375
Y + G ED L M+ + ++ N +L + AC G QIH +++ L
Sbjct: 249 YFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF 308
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
D L N+L+ MYSK G + A VF V +D+++W+S+I+ + EA ++KM
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVF-GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 436 LQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQ 495
DM++ ++ S G + + + ++ + + + T I A V + G
Sbjct: 368 ----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSN-----GY 418
Query: 496 LDQALEFIKGM---PLDPGPSVWGSLLTASV----------MHGNSMTRDLAYRCLLELE 542
++AL + M + P + S+L+A+ +HG + ++ L ++
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND--LSVQ 476
Query: 543 PENPSNYISLSNTYASYKRWDVVTE 567
S Y NT +YK + ++E
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISE 501
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 250/481 (51%), Gaps = 55/481 (11%)
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG 204
+V GKL+ +S +S+++MY +CG A KVFDEMP+RNV ++N MI G
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGG 121
Query: 205 WASLGNFASTSG----------GDLWC-----------------FFRRMQCEGYNADAFT 237
+ S G+ SG W F RM E N A++
Sbjct: 122 YMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS 181
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRV 297
+ +L V D + KN + S ++ Y R + +R +
Sbjct: 182 V--MLGVYVNNRKMEDARKFFEDIPEKNAF---------VWSLMMSGYFRIGDVHEARAI 230
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
F ++ +R+L +W +I GY QNG +DA+ MQ +G P+ V++ S+L ACA G
Sbjct: 231 FYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ-GEGYEPDAVTVSSILSACAQSGR 289
Query: 358 LIVGKQIHAFSTK--VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSM 415
L VG+++H+ +ELN S NALIDMY+KCG L+ A+ VF+++S R +SM
Sbjct: 290 LDVGREVHSLINHRGIELNQFVS--NALIDMYAKCGDLENATSVFESIS-VRSVACCNSM 346
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
IS +HG+G+EA+ + M L +KPD IT ++VL+AC G + EG+ I++ + T+
Sbjct: 347 ISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-D 405
Query: 476 MKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAY 535
+KP V+ C++ +LGRSG+L +A +K M + P +V G+LL A +H M ++A
Sbjct: 406 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVH---MDTEMAE 462
Query: 536 RCLLELEPE-------NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITI 588
+ + +E + ++ S+SN YA +RW +R M++RGL+K PG+S + +
Sbjct: 463 QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Query: 589 S 589
+
Sbjct: 523 T 523
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 186/413 (45%), Gaps = 53/413 (12%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L + H++ + G + + + L+S Y G + +R VF + +NV WN++I GY+
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
N + A LF E+ T+ I + G YGK I +
Sbjct: 124 SNGDAVLASGLFEEISVCRN---------TVTWIEMIKG------YGKRIEIEKARELFE 168
Query: 162 XXXXXANSVMA------MYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN----- 210
+V A +Y + DA K F+++P++N +++M+SG+ +G+
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 211 --FASTSGGDLWCF-------------------FRRMQCEGYNADAFTIASLLPVCCGKT 249
F DL + F MQ EGY DA T++S+L C ++
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSA-CAQS 287
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVW 309
G+ D GRE+H + G++L + + ++LIDMY++ L + VF+ + R++
Sbjct: 288 GRLDVGREVHSLINHRGIEL----NQFVSNALIDMYAKCGDLENATSVFESISVRSVACC 343
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
+MI+ +G ++AL + M+ D ++P++++ I+VL AC G L+ G +I +
Sbjct: 344 NSMISCLAIHGKGKEALEMFSTMESLD-LKPDEITFIAVLTACVHGGFLMEGLKIFSEMK 402
Query: 370 KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
++ + F LI + + G L A R+ + + +++ A +H
Sbjct: 403 TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVH 455
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 43/319 (13%)
Query: 241 LLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
+L C + G+ LH +K G+ SDV +GSSLI MY + +V +R+VFD+
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGV----CSDVMVGSSLISMYGKCGCVVSARKVFDE 106
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREM-----------------------QMKDG 337
M RN+ W AMI GY+ NG A L E+ + ++
Sbjct: 107 MPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF--NALIDMYSKCGSLDY 395
L +V +LG + +++ E + + F + ++ Y + G +
Sbjct: 167 FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
A +F V + RD + W+++I+ Y +G ++A+ + M G +PD +TV S+LSAC+
Sbjct: 227 ARAIFYRV-FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVW 515
+SG +D G ++ SLI ++ + ++DM + G L+ A SV+
Sbjct: 286 QSGRLDVGREVH-SLINHRGIELNQFVSNALIDMYAKCGDLENA------------TSVF 332
Query: 516 GSLLTASVMHGNSMTRDLA 534
S+ SV NSM LA
Sbjct: 333 ESISVRSVACCNSMISCLA 351
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 116/227 (51%), Gaps = 12/227 (5%)
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA-LLGGLIVGKQIHAFSTK 370
+I ++ G+P AL+L ++ + P V LI L ACA ++ +++GK +H+ S K
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI--LRACACVVPRVVLGKLLHSESIK 74
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
+ D + ++LI MY KCG + A +VFD + R+ TW++MI Y +G +AV+
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE-RNVATWNAMIGGYMSNG---DAVL 130
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
++ + + +T + ++ K +++ ++ + +++K V+ + ++ +
Sbjct: 131 ASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM--PFELK-NVKAWSVMLGVY 187
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN-SMTRDLAYR 536
+ +++ A +F + +P + VW +++ G+ R + YR
Sbjct: 188 VNNRKMEDARKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYR 233
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 233/459 (50%), Gaps = 15/459 (3%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N ++ Y + E A K+FDEM + NV S+ +ISG+ +G + L F + +
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNA----LSMFQKMHE 123
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
+ +T AS+ C + G+ +H L +GL ++ + SSL+DMY +
Sbjct: 124 DRPVPPNEYTFASVFKACSA-LAESRIGKNIHARLEISGLR----RNIVVSSSLVDMYGK 178
Query: 288 SKKLVLSRRVFDQM--KSRNLYVWTAMINGYVQNGAPEDALILLREMQMK-DGMRPNKVS 344
+ +RRVFD M RN+ WT+MI Y QN +A+ L R R N+
Sbjct: 179 CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFM 238
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
L SV+ AC+ LG L GK H T+ +T + +L+DMY+KCGSL A ++F +
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR 298
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
I+++SMI A HG GE AV + +M+ I P+ +T++ VL ACS SGLV+EG+
Sbjct: 299 -CHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL--DPGPSVWGSLLTAS 522
+ + +Y + P CVVDMLGR G++D+A E K + + + G +WG+LL+A
Sbjct: 358 EYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPG 582
+HG A + L++ + S YI+LSN YA W+ +R MK G K
Sbjct: 418 RLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
Query: 583 ISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
SWI + + F GD + S I L DL M +
Sbjct: 478 CSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKE 516
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 205/433 (47%), Gaps = 33/433 (7%)
Query: 14 YHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSG 73
+H AF+ H L E + H LT L GFA + F LV +Y
Sbjct: 27 FHLKTKAFLV-HKLSESTNAAFTNLLHTLT-------LKLGFASDTFTVNHLVISYVKLK 78
Query: 74 DLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLA 133
++N +R +F + NV W S+I+GY + +AL +F++M H V P++YT A
Sbjct: 79 EINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKM---HEDRPVPPNEYTFA 135
Query: 134 TISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP-- 191
++ K L + GK I + ++S++ MY +C + A +VFD M
Sbjct: 136 SVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGY 195
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE--GYNADAFTIASLLPVCCGKT 249
RNV S+ MI+ +A + G + FR A+ F +AS++ C
Sbjct: 196 GRNVVSWTSMITAYAQ-----NARGHEAIELFRSFNAALTSDRANQFMLASVISA-CSSL 249
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVW 309
G+ +G+ H + + G + S+ + +SL+DMY++ L + ++F +++ ++ +
Sbjct: 250 GRLQWGKVAHGLVTRGGYE----SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 305
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
T+MI ++G E A+ L EM + + PN V+L+ VL AC+ G +V + + S
Sbjct: 306 TSMIMAKAKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSG--LVNEGLEYLSL 362
Query: 370 KVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNVSYFRD--AITWSSMISAYGLHGR 424
E G D+ + ++DM + G +D A + + + A+ W +++SA LHGR
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Query: 425 GEEAVVTYQKMLQ 437
E ++++Q
Sbjct: 423 VEIVSEASKRLIQ 435
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 146/268 (54%), Gaps = 13/268 (4%)
Query: 267 LDLKMG--SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPED 324
L LK+G SD + L+ Y + K++ +R++FD+M N+ WT++I+GY G P++
Sbjct: 54 LTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQN 113
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFN 381
AL + ++M + PN+ + SV AC+ L +GK IHA ++E++G + + +
Sbjct: 114 ALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHA---RLEISGLRRNIVVSS 170
Query: 382 ALIDMYSKCGSLDYASRVFDN-VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM--LQL 438
+L+DMY KC ++ A RVFD+ + Y R+ ++W+SMI+AY + RG EA+ ++
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQ 498
+ + + SV+SACS G + G + + L+TR + + ++DM + G L
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 499 ALEFIKGMPLDPGPSVWGSLLTASVMHG 526
A + + S + S++ A HG
Sbjct: 290 AEKIFLRIRCHSVIS-YTSMIMAKAKHG 316
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 270/541 (49%), Gaps = 49/541 (9%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
HA ++T+G A+ + +LV+ Y G + +R VF + +++ +I +N +
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYY 98
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
+L FREM + D + D + + ++ K S L D +GK+I
Sbjct: 99 QESLDFFREMYK----DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
+S++ MYS+ GE G+A KVF ++ ++++ FN MISG+A+ ++ + + M
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN-----NSQADEALNLVKDM 209
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+ G D T +L+ S M +
Sbjct: 210 KLLGIKPDVITWNALI------------------------------------SGFSHMRN 233
Query: 287 RSK-KLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
K +L D K ++ WT++I+G V N E A ++M + G+ PN ++
Sbjct: 234 EEKVSEILELMCLDGYKP-DVVSWTSIISGLVHNFQNEKAFDAFKQM-LTHGLYPNSATI 291
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
I++LPAC L + GK+IH +S L + +AL+DMY KCG + A +F
Sbjct: 292 ITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK 351
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
+ +T++SMI Y HG ++AV + +M G K D +T ++L+ACS +GL D G
Sbjct: 352 -KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
++ + +Y++ P +E AC+VD+LGR+G+L +A E IK M ++P VWG+LL A H
Sbjct: 411 LFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNH 470
Query: 526 GNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
GN +A + L ELEPEN N + L++ YA+ W+ V ++ M+K++ ++ G SW
Sbjct: 471 GNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSW 530
Query: 586 I 586
+
Sbjct: 531 V 531
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
GR LH +LV +G+ + + L+ Y K++ +R+VFD+M R++ MI
Sbjct: 35 GRVLHAHLVTSGI----ARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIG 90
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
+NG +++L REM KDG++ + + S+L A L GK IH K
Sbjct: 91 ACARNGYYQESLDFFREMY-KDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
D + ++LIDMYSK G + A +VF ++ +D + +++MIS Y + + +EA+ +
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGE-QDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 435 MLQLGIKPDMITVVSVLSACS 455
M LGIKPD+IT +++S S
Sbjct: 209 MKLLGIKPDVITWNALISGFS 229
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 203/345 (58%), Gaps = 3/345 (0%)
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQ 333
DV +S++ Y + + +R +FD+M RNL+ W+ MINGY +N E A+ L M+
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
++G+ N+ ++SV+ +CA LG L G++ + + K + + L AL+DM+ +CG +
Sbjct: 242 -REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+ A VF+ + D+++WSS+I +HG +A+ + +M+ LG P +T +VLSA
Sbjct: 301 EKAIHVFEGLPE-TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS 513
CS GLV++G+ IY ++ + ++P +E C+VDMLGR+G+L +A FI M + P
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 514 VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMK 573
+ G+LL A ++ N+ + L++++PE+ Y+ LSN YA +WD + +R MMK
Sbjct: 420 ILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK 479
Query: 574 ERGLKKVPGISWITISGNTHSFAVG-DKAHPSSSLIYDMLDDLVA 617
E+ +KK PG S I I G + F +G D+ HP I ++++
Sbjct: 480 EKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILG 524
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 200/481 (41%), Gaps = 82/481 (17%)
Query: 33 LTVDHRAHRLTQQC---------HAQILTNGFAQNPFLTTRLVSAYATSGDLN------- 76
L H L Q C H +L + F+ +RL++ N
Sbjct: 9 LRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLG 68
Query: 77 MSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATIS 136
+ +F I+ N++++N LI + E A + +M +S + PD+ T +
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSR----IWPDNITFPFLI 124
Query: 137 KVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE-------FG-------- 181
K S E++ ++ G+ + NS++ MY+ CG FG
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 182 ----------------DAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRR 225
+A ++FDEMP RN+ ++++MI+G+A F DL+ F +R
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI--DLFEFMKR 242
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
EG A+ + S++ C G ++G + Y+VK+ M ++ LG++L+DM+
Sbjct: 243 ---EGVVANETVMVSVIS-SCAHLGALEFGERAYEYVVKS----HMTVNLILGTALVDMF 294
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
R + + VF+ + + W+++I G +G A+ +M + G P V+
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTF 353
Query: 346 ISVLPACALLGGLIVG--------KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
+VL AC+ GGL+ K+ H ++E G ++DM + G L A
Sbjct: 354 TAVLSACS-HGGLVEKGLEIYENMKKDHGIEPRLEHYG------CIVDMLGRAGKLAEAE 406
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD---MITVVSVLSAC 454
+ +A +++ A ++ E A +++ +KP+ ++S + AC
Sbjct: 407 NFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK--VKPEHSGYYVLLSNIYAC 464
Query: 455 S 455
+
Sbjct: 465 A 465
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 145/309 (46%), Gaps = 46/309 (14%)
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDM------YSRSKKLV-LSRRVFDQMKSRNLYVWT 310
+H +L++ L SDV + S L+ + +++ L+ + +F Q+++ NL+V+
Sbjct: 31 IHGFLLRTHLI----SDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFN 86
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
+I + P A +M +K + P+ ++ ++ A + + ++VG+Q H+ +
Sbjct: 87 LLIRCFSTGAEPSKAFGFYTQM-LKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 371 VELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGR------ 424
D + N+L+ MY+ CG + A R+F + FRD ++W+SM++ Y G
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG-FRDVVSWTSMVAGYCKCGMVENARE 204
Query: 425 -------------------------GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
E+A+ ++ M + G+ + +VSV+S+C+ G
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
++ G Y + + M + + +VDM R G +++A+ +G+P S W S++
Sbjct: 265 LEFGERAY-EYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS-WSSII 322
Query: 520 TASVMHGNS 528
+HG++
Sbjct: 323 KGLAVHGHA 331
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 278/569 (48%), Gaps = 41/569 (7%)
Query: 31 LQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNV 90
L ++DH + +Q H ++ G + FL +L+ AY + + + +F + +N+
Sbjct: 45 LSASLDHLSD--VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNI 102
Query: 91 YLWNSLINGYV-KNREFGHALVLFREMGRSHGGDC----VLPDDYTLATIS-----KVSG 140
WN LI+G + ++ + H R+H G C +L D +L +S ++
Sbjct: 103 VTWNILIHGVIQRDGDTNH---------RAHLGFCYLSRILFTDVSLDHVSFMGLIRLCT 153
Query: 141 ELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNV 200
+ ++ G + + S++ Y +CG +A +VF+ + R++ +N
Sbjct: 154 DSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNA 213
Query: 201 MISGWASLGNFASTSGGDLWCFFRRMQCEG--YNADAFTIASLLPVCCGKTGKWDYGREL 258
++S + G G + M + + D FT +SLL C + + G+++
Sbjct: 214 LVSSYVLNGMIDEAFG-----LLKLMGSDKNRFRGDYFTFSSLLSAC-----RIEQGKQI 263
Query: 259 HCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQ 318
H L K D+ + ++L++MY++S L +R F+ M RN+ W AMI G+ Q
Sbjct: 264 HAILFKVSYQF----DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 319 NGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTS 378
NG +A+ L +M +++ ++P++++ SVL +CA + KQ+ A TK S
Sbjct: 320 NGEGREAMRLFGQMLLEN-LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ N+LI YS+ G+L A F ++ D ++W+S+I A HG EE++ ++ MLQ
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIRE-PDLVSWTSVIGALASHGFAEESLQMFESMLQ- 436
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQ 498
++PD IT + VLSACS GLV EG+ + + Y+++ E C++D+LGR+G +D+
Sbjct: 437 KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDE 496
Query: 499 ALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYAS 558
A + + MP +P + +H + + LLE+EP P NY LSN Y S
Sbjct: 497 ASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVS 556
Query: 559 YKRWDVVTEVRTMMKERGLK-KVPGISWI 586
W+ +R + K PG SW+
Sbjct: 557 EGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 189/426 (44%), Gaps = 25/426 (5%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
L++L D + Q H ++ G + F +T LV Y G + +R VF ++ ++
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 90 VYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK 149
+ LWN+L++ YV N A L + MG D +T +++ Q GK
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNR--FRGDYFTFSSLLSACRIEQ----GK 261
Query: 150 LIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG 209
I A +++ MY++ DA + F+ M RNV S+N MI G+A G
Sbjct: 262 QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 210 NFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL 269
G + F +M E D T AS+L C + W+ +++ + K G
Sbjct: 322 -----EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI-KQVQAMVTKKG--- 372
Query: 270 KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILL 329
+ + +SLI YSR+ L + F ++ +L WT++I +G E++L +
Sbjct: 373 -SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 330 REMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE---LNGDTSLFNALIDM 386
M K ++P+K++ + VL AC+ GGL V + + F E + + + LID+
Sbjct: 432 ESMLQK--LQPDKITFLEVLSACS-HGGL-VQEGLRCFKRMTEFYKIEAEDEHYTCLIDL 487
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
+ G +D AS V +++ ++ +H + E +K+L+ I+P
Sbjct: 488 LGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE--IEPTKPV 545
Query: 447 VVSVLS 452
S+LS
Sbjct: 546 NYSILS 551
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 3/336 (0%)
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
LI+ Y L + +F+QM +++ WT MI GY QN +A+ + +M M++G+ P
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM-MEEGIIP 1030
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
++V++ +V+ ACA LG L +GK++H ++ + D + +AL+DMYSKCGSL+ A VF
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF 1090
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
N+ ++ W+S+I HG +EA+ + KM +KP+ +T VSV +AC+ +GLV
Sbjct: 1091 FNLPK-KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
DEG IY S+I Y + VE +V + ++G + +ALE I M +P +WG+LL
Sbjct: 1150 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1209
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
+H N + ++A+ L+ LEP N Y L + YA RW V E+R M+E G++K+
Sbjct: 1210 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKI 1269
Query: 581 -PGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
PG S I I H FA DK+H +S + +LD++
Sbjct: 1270 CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1305
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 211/480 (43%), Gaps = 73/480 (15%)
Query: 17 SATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLN 76
SA+ + P NL ++++ +L + A ++ Q+ L + ++A + L+
Sbjct: 766 SASLSLAPPNLKKIIKQC---STPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLD 822
Query: 77 MSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATIS 136
++ ++ NV+++N+L G+V +L L+ M R D V P YT +++
Sbjct: 823 LAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR----DSVSPSSYTYSSLV 878
Query: 137 KVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR--- 193
K S +G+ + +++ YS G +A KVFDEMP+R
Sbjct: 879 KASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDI 936
Query: 194 ----------------------------NVGSFNVMISGWASLGN-------FASTSGGD 218
N + N +I+G+ LGN F D
Sbjct: 937 AWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKD 996
Query: 219 L--W-----------------CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELH 259
+ W F +M EG D T+++++ C G + G+E+H
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC-AHLGVLEIGKEVH 1055
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
Y ++NG L DV++GS+L+DMYS+ L + VF + +NL+ W ++I G +
Sbjct: 1056 MYTLQNGFVL----DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH-AFSTKVELNGDTS 378
G ++AL + +M+M + ++PN V+ +SV AC G + G++I+ + + +
Sbjct: 1112 GFAQEALKMFAKMEM-ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1170
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
+ ++ ++SK G + A + N+ + +A+ W +++ +H A + + K++ L
Sbjct: 1171 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL 1230
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 236/442 (53%), Gaps = 16/442 (3%)
Query: 178 GEFGDAMKVFDEM-PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN-ADA 235
G A +FD + +N +I G+++ S+S + F+ RM + D
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSN-----SSSPLNSILFYNRMLLSSVSRPDL 107
Query: 236 FTIASLLPVCCGKTGKWDYGRELHCYLVKNG-LDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
FT L C + E+H ++++G LD D + +SL+ YS + + ++
Sbjct: 108 FTFNFALKSC-ERIKSIPKCLEIHGSVIRSGFLD-----DAIVATSLVRCYSANGSVEIA 161
Query: 295 RRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
+VFD+M R+L W MI + G AL + + M +G+ + +L+++L +CA
Sbjct: 162 SKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG-NEGVCGDSYTLVALLSSCAH 220
Query: 355 LGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSS 414
+ L +G +H + + + NALIDMY+KCGSL+ A VF+ + RD +TW+S
Sbjct: 221 VSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK-RDVLTWNS 279
Query: 415 MISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRY 474
MI YG+HG G EA+ ++KM+ G++P+ IT + +L CS GLV EG+ + + +++
Sbjct: 280 MIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQF 339
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLA 534
+ P V+ C+VD+ GR+GQL+ +LE I P +W +LL + +H N ++A
Sbjct: 340 HLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVA 399
Query: 535 YRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHS 594
+ L++LE N +Y+ +++ Y++ +R +++ L+ VPG SWI I H
Sbjct: 400 MKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHK 459
Query: 595 FAVGDKAHPSSSLIYDMLDDLV 616
F V DK HP S++IY L +++
Sbjct: 460 FVVDDKMHPESAVIYSELGEVI 481
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 29/255 (11%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
+ H ++ +GF + + T LV Y+ +G + ++ VF + +++ WN +I +
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
AL +++ M G + V D YTL + + L G ++ +
Sbjct: 188 LHNQALSMYKRM----GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
+N+++ MY++CG +A+ VF+ M +R+V ++N MI G+ G+ G + FFR
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGH-----GVEAISFFR 298
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL--KMGSDVHLGSS-- 280
+M G +A T LL C H LVK G++ M S HL +
Sbjct: 299 KMVASGVRPNAITFLGLLLGCS------------HQGLVKEGVEHFEIMSSQFHLTPNVK 346
Query: 281 ----LIDMYSRSKKL 291
++D+Y R+ +L
Sbjct: 347 HYGCMVDLYGRAGQL 361
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 263/541 (48%), Gaps = 23/541 (4%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H +G + + L+S Y+ +L + ++F ++ K+ WN++I Y ++
Sbjct: 174 HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ 233
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE-LQDLVYGKLIPGKSXXXXXXXXXX 165
A+ +F+ M + + P + VS E L LV
Sbjct: 234 EEAITVFKNMFEKNVE--ISPVTIINLLSAHVSHEPLHCLV---------VKCGMVNDIS 282
Query: 166 XANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRR 225
S++ YSRCG A +++ Q ++ ++S +A G+ +F +
Sbjct: 283 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAV-----VYFSK 337
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
+ DA + +L C K+ D G LH Y +K+GL K + + LI MY
Sbjct: 338 TRQLCMKIDAVALVGILHGC-KKSSHIDIGMSLHGYAIKSGLCTK----TLVVNGLITMY 392
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
S+ + +F+Q++ L W ++I+G VQ+G A + +M + G+ P+ +++
Sbjct: 393 SKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITI 452
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
S+L C+ L L +GK++H ++ + + + ALIDMY+KCG+ A VF ++
Sbjct: 453 ASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKA 512
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
A TW+SMIS Y L G A+ Y +M + G+KPD IT + VLSAC+ G VDEG
Sbjct: 513 PCTA-TWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKI 571
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
+ ++I + + PT++ A +V +LGR+ +AL I M + P +VWG+LL+A ++H
Sbjct: 572 CFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIH 631
Query: 526 GNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
+ R + L+ +N Y+ +SN YA+ WD V VR MMK+ G G+S
Sbjct: 632 RELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQ 691
Query: 586 I 586
I
Sbjct: 692 I 692
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 244/544 (44%), Gaps = 41/544 (7%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q + +G + ++ T L++ Y G + ++++F + ++ +WN+LI GY +N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
A LF M + P TL + G+ + G+ + G +
Sbjct: 130 GYECDAWKLFIVMLQQGFS----PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
N++++ YS+C E G A +F EM ++ S+N MI ++ G + F
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG-----LQEEAITVF 240
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
+ M + TI +LL LHC +VK G M +D+ + +SL+
Sbjct: 241 KNMFEKNVEISPVTIINLLSAHVSH-------EPLHCLVVKCG----MVNDISVVTSLVC 289
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
YSR LV + R++ K ++ T++++ Y + G + A++ + + + M+ + V
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR-QLCMKIDAV 348
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+L+ +L C + +G +H ++ K L T + N LI MYSK ++ +F+ +
Sbjct: 349 ALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQL 408
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAV-VTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
I+W+S+IS GR A V +Q ML G+ PD IT+ S+L+ CS+ ++
Sbjct: 409 QE-TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 463 GMGIYNSLITRYQMKPTVE----ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSL 518
G ++ Y ++ E +C ++DM + G QA K + P + W S+
Sbjct: 468 GKELHG-----YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSM 521
Query: 519 LTASVMHGNSMTRDLAYRCLLELEPEN-PSNYISLSNTYASYKRWDVVTE----VRTMMK 573
++ + G + A C LE+ + + I+ ++ V E R M+K
Sbjct: 522 ISGYSLSG---LQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
Query: 574 ERGL 577
E G+
Sbjct: 579 EFGI 582
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 21/421 (4%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
I+P ++ LL V H + H ++ G + + T LV AY+ G L + +
Sbjct: 250 ISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGE 141
+ S + ++ S+++ Y + + A+V F + + C+ D L I +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL----CMKIDAVALVGILHGCKK 359
Query: 142 LQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVM 201
+ G + G + N ++ MYS+ + + +F+++ + + S+N +
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 202 ISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCY 261
ISG G AST+ F + M G DA TIASLL C + + G+ELH Y
Sbjct: 420 ISGCVQSGR-ASTA---FEVFHQMMLTGGLLPDAITIASLLAG-CSQLCCLNLGKELHGY 474
Query: 262 LVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGA 321
++N + ++ + ++LIDMY++ V + VF +K+ W +MI+GY +G
Sbjct: 475 TLRNNFE----NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 322 PEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK-QIHAFSTKVELNGDTSLF 380
AL EM+ K G++P++++ + VL AC G + GK A + ++ +
Sbjct: 531 QHRALSCYLEMREK-GLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHY 589
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
++ + + A + + D+ W +++SA +H E +KM L
Sbjct: 590 ALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDY 649
Query: 441 K 441
K
Sbjct: 650 K 650
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/527 (29%), Positives = 256/527 (48%), Gaps = 39/527 (7%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
++ Y G + L+F + +++ WNS+I+ + +N A LF+E+ + C
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY--SC 492
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
T+ I L++GK SV + G+ A
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGK-------------------SVHCWLQKLGDLTSAF 533
Query: 185 KVFDEMPQ-RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG-YNADAFTIASLL 242
+ M + R++ S+N +ISG AS G+ + F+ M EG D T+ +
Sbjct: 534 LRLETMSETRDLTSWNSVISGCASSGHHLESLRA-----FQAMSREGKIRHDLITLLGTI 588
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
G G GR H +K+ +L D L ++LI MY R K + + +VF +
Sbjct: 589 SAS-GNLGLVLQGRCFHGLAIKSLREL----DTQLQNTLITMYGRCKDIESAVKVFGLIS 643
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
NL W +I+ QN A + L R ++++ PN+++ + +L A LG G
Sbjct: 644 DPNLCSWNCVISALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGM 699
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
Q H + + + AL+DMYS CG L+ +VF N S W+S+ISA+G H
Sbjct: 700 QAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRN-SGVNSISAWNSVISAHGFH 758
Query: 423 GRGEEAVVTYQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
G GE+A+ ++++ ++P+ + +S+LSACS SG +DEG+ Y + ++ +KP E
Sbjct: 759 GMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTE 818
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLEL 541
+VDMLGR+G+L +A EFI G+ VWG+LL+A HG++ L E+
Sbjct: 819 HRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEM 878
Query: 542 EPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITI 588
EP+N S YISL+NTY W+ +R M+++ LKK+PG S I +
Sbjct: 879 EPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 205/414 (49%), Gaps = 16/414 (3%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H L G Q+ +++L++ Y +G+L S +F ++ K+V +WNS+I +N +
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
A+ LF EM H G+ D TL + L ++ +
Sbjct: 170 IAAVGLFIEM--IHKGNEF--DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N++M +Y++ A VF M R++ S+N +++ + G+ + +F+ M
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ-----YFKSM 280
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
G AD T + ++ C + G LH ++K+G + + V +G+S+I MYS
Sbjct: 281 TGSGQEADTVTFSCVISAC-SSIEELTLGESLHGLVIKSGYSPE--AHVSVGNSIISMYS 337
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ + VF+++ R++ A++NG+ NG E+A +L +MQ D ++P+ +++
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVV 397
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDT-SLFNALIDMYSKCGSLDYASRVFDNVSY 405
S+ C L G+ +H ++ ++E+ + N++IDMY KCG A +F ++
Sbjct: 398 SITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL--GIKPDMITVVSVLSACSKS 457
RD ++W+SMISA+ +G +A +++++ K + TV+++L++C S
Sbjct: 458 -RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 168/363 (46%), Gaps = 16/363 (4%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
++ ++ Y R GE + +FDE+ +++V +N MI+ G + + G F M
Sbjct: 125 SSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVG-----LFIEM 179
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
+G D+ T+ LHC ++ GL D L ++L+++Y+
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSM-LHCLAIETGLV----GDSSLCNALMNLYA 234
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ + L + VF M+ R++ W ++ + NG P +L + M G + V+
Sbjct: 235 KGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT-GSGQEADTVTFS 293
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDT--SLFNALIDMYSKCGSLDYASRVFDNVS 404
V+ AC+ + L +G+ +H K + + S+ N++I MYSKCG + A VF+ +
Sbjct: 294 CVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL- 352
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL-GIKPDMITVVSVLSACSKSGLVDEG 463
RD I+ +++++ + +G EEA +M + I+PD+ TVVS+ S C EG
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
++ + +E+ V+DM G+ G QA E + W S+++A
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFS 471
Query: 524 MHG 526
+G
Sbjct: 472 QNG 474
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 240/458 (52%), Gaps = 16/458 (3%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N ++ M+ +CG DA ++FDE+P+RN+ S+ +ISG+ + GN+ + + F+ M
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYV-----EAFELFKMMW 216
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
E + + T A +L G G G++LH +K G+ + + LIDMYS+
Sbjct: 217 EELSDCETHTFAVMLRASAG-LGSIYVGKQLHVCALKLGV----VDNTFVSCGLIDMYSK 271
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ +R F+ M + W +I GY +G E+AL LL +M+ G+ ++ +L
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSI 330
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
++ L L + KQ HA + + AL+D YSK G +D A VFD + +
Sbjct: 331 MIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPR-K 389
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
+ I+W++++ Y HGRG +AV ++KM+ + P+ +T ++VLSAC+ SGL ++G I+
Sbjct: 390 NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIF 449
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
S+ + +KP AC++++LGR G LD+A+ FI+ PL ++W +LL A M N
Sbjct: 450 LSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQEN 509
Query: 528 SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
+ L + PE NY+ + N Y S + V ++ +GL +P +W+
Sbjct: 510 LELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVE 569
Query: 588 ISGNTHSFAVGDKAHPSSSL----IYDMLDDLVAIMTD 621
+ THSF GD+ + IY +D+L+ +++
Sbjct: 570 VGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISE 607
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 228/485 (47%), Gaps = 34/485 (7%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
L++ + ++ R ++ + +++NGF ++ R++ + G + +R +F I +N
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 90 VYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK 149
+Y + S+I+G+V + A LF+ M DC + +T A + + S L + GK
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEEL-SDC---ETHTFAVMLRASAGLGSIYVGK 244
Query: 150 LIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLG 209
+ + + ++ MYS+CG+ DA F+ MP++ ++N +I+G+A G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 210 NFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL 269
+ C M+ G + D FT++ ++ + K K + ++ H L++NG +
Sbjct: 305 -----YSEEALCLLYDMRDSGVSIDQFTLSIMIRIST-KLAKLELTKQAHASLIRNGFE- 357
Query: 270 KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILL 329
S++ ++L+D YS+ ++ +R VFD++ +N+ W A++ GY +G DA+ L
Sbjct: 358 ---SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 330 REMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALIDM 386
+M + + PN V+ ++VL ACA G G +I F + E++G + +I++
Sbjct: 415 EKM-IAANVAPNHVTFLAVLSACAYSGLSEQGWEI--FLSMSEVHGIKPRAMHYACMIEL 471
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMI- 445
+ G LD A W+++++A + E V +K+ +G P+ +
Sbjct: 472 LGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG--PEKLG 529
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITR-YQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
V + + + G E G+ +L ++ M P AC +G DQ F+
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMP-----ACTWVEVG-----DQTHSFLS 579
Query: 505 GMPLD 509
G D
Sbjct: 580 GDRFD 584
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 270/569 (47%), Gaps = 81/569 (14%)
Query: 56 AQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFRE 115
+++ F ++S YA + + + L+F + +N W+++I G+ +N E A+VLFR+
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 116 MG-RSHGGDCVLP----DDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSV 170
M + C L + L+ + V G+ YG L+ G+ N++
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQ-----YGSLVSGREDLVYAY------NTL 241
Query: 171 MAMYSRCGEFGDAMKVFDEMPQ---------------RNVGSFNVMISGWASLGNFASTS 215
+ Y + G+ A +FD++P +NV S+N MI + +G+ S
Sbjct: 242 IVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSAR 301
Query: 216 GGDLWCFFRRMQ----------CEGY-----NADAFTIASLLPVCCGKTGKWDYGRELHC 260
F +M+ +GY DAF + S +P
Sbjct: 302 -----LLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP----------------- 339
Query: 261 YLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG 320
D H + ++ Y+ + L+R F++ ++ W ++I Y +N
Sbjct: 340 -----------NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
++A+ L M + +G +P+ +L S+L A L L +G Q+H K + D +
Sbjct: 389 DYKEAVDLFIRMNI-EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVH 446
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
NALI MYS+CG + + R+FD + R+ ITW++MI Y HG EA+ + M GI
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
P IT VSVL+AC+ +GLVDE + S+++ Y+++P +E + +V++ GQ ++A+
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAM 566
Query: 501 EFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYK 560
I MP +P +VWG+LL A ++ N +A + LEPE+ + Y+ L N YA
Sbjct: 567 YIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMG 626
Query: 561 RWDVVTEVRTMMKERGLKKVPGISWITIS 589
WD ++VR M+ + +KK G SW+ S
Sbjct: 627 LWDEASQVRMNMESKRIKKERGSSWVDSS 655
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 210/492 (42%), Gaps = 87/492 (17%)
Query: 56 AQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN---REFGHALVL 112
A+N ++S Y ++N +R +F + ++V WN++I+GYV R A L
Sbjct: 68 ARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKL 127
Query: 113 FREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMA 172
F EM P + + + +SG
Sbjct: 128 FDEM----------PSRDSFSWNTMISG-------------------------------- 145
Query: 173 MYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN 232
Y++ G+A+ +F++MP+RN S++ MI+G+ G S FR+M + +
Sbjct: 146 -YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAV-----VLFRKMPVKDSS 199
Query: 233 ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLV 292
+A L+ W G+ + LV DL V+ ++LI Y + ++
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQ--YGSLVSGREDL-----VYAYNTLIVGYGQRGQVE 252
Query: 293 LSRRVFDQMKS---------------RNLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
+R +FDQ+ +N+ W +MI Y++ G A +L +M+ +D
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT 312
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL-NGDTSLFNALIDMYSKCGSLDYA 396
+ N + + G + V + AF+ E+ N D +N ++ Y+ G+++ A
Sbjct: 313 ISWNTM----------IDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELA 362
Query: 397 SRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK 456
F+ + ++W+S+I+AY + +EAV + +M G KPD T+ S+LSA
Sbjct: 363 RHYFEKTPE-KHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA--S 419
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWG 516
+GLV+ +G+ I + P V + ++ M R G++ ++ M L W
Sbjct: 420 TGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 517 SLLTASVMHGNS 528
+++ HGN+
Sbjct: 480 AMIGGYAFHGNA 491
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
RS + +R +F+++++RN W MI+GYV+ A L M +D + N ++I
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN--TMI 109
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
S +C GG+ ++ ++ + D+ +N +I Y+K + A +F+ +
Sbjct: 110 SGYVSC---GGIRFLEEARKLFDEMP-SRDSFSWNTMISGYAKNRRIGEALLLFEKMPE- 164
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL--SACSKSGLV---- 460
R+A++WS+MI+ + +G + AVV ++KM P V ++ S++ V
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQY 224
Query: 461 -------DEGMGIYNSLITRYQMKPTVEICACVVDML 490
++ + YN+LI Y + VE C+ D +
Sbjct: 225 GSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI 261
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 226/407 (55%), Gaps = 12/407 (2%)
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
F ++ VF MP RN+ S+N++I G S FAS S DL+ R C D FT+
Sbjct: 83 FPTSLSVFWHMPYRNIFSWNIII-GEFSRSGFASKSI-DLFLRMWRESC--VRPDDFTLP 138
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
+L C + + G +H +K G S + + S+L+ MY KL+ +R++FD
Sbjct: 139 LILRACSA-SREAKSGDLIHVLCLKLGFS----SSLFVSSALVIMYVDMGKLLHARKLFD 193
Query: 300 QMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI 359
M R+ ++TAM GYVQ G L + REM G + V ++S+L AC LG L
Sbjct: 194 DMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGY-SGFALDSVVMVSLLMACGQLGALK 252
Query: 360 VGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAY 419
GK +H + + +L NA+ DMY KC LDYA VF N+S RD I+WSS+I Y
Sbjct: 253 HGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR-RDVISWSSLILGY 311
Query: 420 GLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
GL G + + +ML+ GI+P+ +T + VLSAC+ GLV++ +Y L+ Y + P
Sbjct: 312 GLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPE 370
Query: 480 VEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLL 539
++ A V D + R+G L++A +F++ MP+ P +V G++L+ ++GN + R L+
Sbjct: 371 LKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELI 430
Query: 540 ELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWI 586
+L+P S Y++L+ Y++ R+D +R MKE+ + KVPG S I
Sbjct: 431 QLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 195/410 (47%), Gaps = 22/410 (5%)
Query: 58 NPFLTTRLVSAYATSGDLNMSRL-VFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREM 116
N L+++LV AY+ L + L VF + +N++ WN +I + ++ ++ LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 117 GRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
R CV PDD+TL I + ++ G LI +++++ MY
Sbjct: 125 WRE---SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 177 CGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAF 236
G+ A K+FD+MP R+ + M G+ G + G FR M G+ D+
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE--AMLG---LAMFREMGYSGFALDSV 236
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
+ SLL + CG+ G +G+ +H + ++ L + +LG+++ DMY + L +
Sbjct: 237 VMVSLL-MACGQLGALKHGKSVHGWCIRRCSCLGL----NLGNAITDMYVKCSILDYAHT 291
Query: 297 VFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLG 356
VF M R++ W+++I GY +G + L EM +K+G+ PN V+ + VL ACA G
Sbjct: 292 VFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM-LKEGIEPNAVTFLGVLSACA-HG 349
Query: 357 GLIVGKQIHAFSTKVELNGDTSL--FNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSS 414
GL+ ++ F E N L + ++ D S+ G L+ A + +++ D +
Sbjct: 350 GLVEKSWLY-FRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGA 408
Query: 415 MISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC-SKSGLVDEG 463
++S ++G E ++++QL KP + L+ S +G DE
Sbjct: 409 VLSGCKVYGNVEVGERVARELIQL--KPRKASYYVTLAGLYSAAGRFDEA 456
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 142/353 (40%), Gaps = 56/353 (15%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H L GF+ + F+++ LV Y G L +R +F + ++ L+ ++ GYV+ E
Sbjct: 157 HVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEA 216
Query: 107 GHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXX 166
L +FREMG S D + ++ G+L L +GK + G
Sbjct: 217 MLGLAMFREMGYSGFA----LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL 272
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N++ MY +C A VF M +R+V S++ +I G+ G+ + + F M
Sbjct: 273 GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMS-----FKLFDEM 327
Query: 227 QCEGYNADAFTIASLLPVCC--GKTGK-WDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
EG +A T +L C G K W Y R + Y + ++ +S+ D
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEY--------NIVPELKHYASVAD 379
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
SR+ G E+A L +M +K P++
Sbjct: 380 CMSRA-------------------------------GLLEEAEKFLEDMPVK----PDEA 404
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
+ +VL C + G + VG+++ +++ S + L +YS G D A
Sbjct: 405 VMGAVLSGCKVYGNVEVGERVARELIQLKPR-KASYYVTLAGLYSAAGRFDEA 456
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 268/555 (48%), Gaps = 50/555 (9%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEA----KNVYLWNSLINGYVKNREFGHALVLFREMGRSH 120
L+ Y G + + + +E +V+ W ++I+G + N AL +FR+M +
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 121 GGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEF 180
V+P+ T+ + L+ + G + + NS++ MYS+CG+
Sbjct: 348 ----VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 181 GDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIAS 240
DA KVFD + ++V ++N MI+G+ G G + F RMQ + T +
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAG-----YCGKAYELFTRMQDANLRPNIITWNT 458
Query: 241 LLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
++ +G +KNG + +D++ R +K D
Sbjct: 459 MI------SG-----------YIKNGDE----------GEAMDLFQRMEK--------DG 483
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
RN W +I GY+QNG ++AL L R+MQ M PN V+++S+LPACA L G +
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM-PNSVTILSLLPACANLLGAKM 542
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
++IH + L+ ++ NAL D Y+K G ++Y+ +F + +D ITW+S+I Y
Sbjct: 543 VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET-KDIITWNSLIGGYV 601
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTV 480
LHG A+ + +M GI P+ T+ S++ A G VDEG ++ S+ Y + P +
Sbjct: 602 LHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPAL 661
Query: 481 EICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLE 540
E C+ +V + GR+ +L++AL+FI+ M + +W S LT +HG+ A L
Sbjct: 662 EHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS 721
Query: 541 LEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDK 600
LEPEN + +S YA + E ++ LKK G SWI + H+F GD+
Sbjct: 722 LEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQ 781
Query: 601 AHPSSSLIYDMLDDL 615
+ + ++Y +++ +
Sbjct: 782 SKLCTDVLYPLVEKM 796
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 146/575 (25%), Positives = 241/575 (41%), Gaps = 129/575 (22%)
Query: 28 LELLQLTVDHRAHRLTQQCHAQILTNGFAQNP--FLTTRLVSAYATSGDLNMSRLVFHSI 85
L+LL+ +D + L + HA+ G P F+ T+L+S YA G + +R VF S+
Sbjct: 85 LKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 86 EAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDL 145
+N++ W+++I Y + + LFR M + D VLPDD+ I + D+
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMK----DGVLPDDFLFPKILQGCANCGDV 197
Query: 146 VYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNV---------- 195
GK+I +NS++A+Y++CGE A K F M +R+V
Sbjct: 198 EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAY 257
Query: 196 -------------------------GSFNVMISGWASLGN-------------FASTSGG 217
++N++I G+ LG F T+
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 218 DLWC-----------------FFRRMQCEGYNADAFTIASLLPVC-CGKTGKWDYGRELH 259
W FR+M G +A TI S + C C K + G E+H
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV--INQGSEVH 375
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQN 319
VK G DV +G+SL+DMYS+ KL +R+VFD +K++++Y W +MI GY Q
Sbjct: 376 SIAVKMGFI----DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
G A L MQ + +RPN ++
Sbjct: 432 GYCGKAYELFTRMQDAN-LRPNIIT----------------------------------- 455
Query: 380 FNALIDMYSKCG----SLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKM 435
+N +I Y K G ++D R+ + R+ TW+ +I+ Y +G+ +EA+ ++KM
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 436 LQLGIKPDMITVVSVLSACSK---SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
P+ +T++S+L AC+ + +V E G + R + + + D +
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGC----VLRRNLDAIHAVKNALTDTYAK 571
Query: 493 SGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
SG ++ + GM W SL+ V+HG+
Sbjct: 572 SGDIEYSRTIFLGME-TKDIITWNSLIGGYVLHGS 605
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 195/415 (46%), Gaps = 60/415 (14%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNR 104
+ H+ + GF + + LV Y+ G L +R VF S++ K+VY WNS+I GY +
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
G A LF M ++ + P+ T
Sbjct: 433 YCGKAYELFTRMQDAN----LRPNIITW-------------------------------- 456
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMP-----QRNVGSFNVMISGWASLGNFASTSGGDL 219
N++++ Y + G+ G+AM +F M QRN ++N++I+G+ G +
Sbjct: 457 ---NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG-----KKDEA 508
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH-LG 278
FR+MQ + ++ TI SLLP C G RE+H +++ LD +H +
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGA-KMVREIHGCVLRRNLDA-----IHAVK 562
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
++L D Y++S + SR +F M+++++ W ++I GYV +G+ AL L +M+ + G+
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQ-GI 621
Query: 339 RPNKVSLISVLPACALLGGLIVGKQI-HAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
PN+ +L S++ A L+G + GK++ ++ + + +A++ +Y + L+ A
Sbjct: 622 TPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEAL 681
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLS 452
+ ++ + W S ++ +HG + A+ + + L +P+ S++S
Sbjct: 682 QFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL--EPENTATESIVS 734
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
+L LL + ++ ++ H +L + L YA SGD+ SR +F +E
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
K++ WNSLI GYV + +G AL LF +M ++ G + P+ TL++I G + ++
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQM-KTQG---ITPNRGTLSSIILAHGLMGNVD 642
Query: 147 YG-KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM 190
G K+ + ++++ +Y R +A++ EM
Sbjct: 643 EGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 207/386 (53%), Gaps = 29/386 (7%)
Query: 255 GRELHCYLVKNGLDLKM---GSDVHL-GS-----------------------SLIDMYSR 287
G LHC +VK+GL+ + + +H+ GS S++D Y++
Sbjct: 127 GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAK 186
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
S +V +R VFD+M R++ W++MI+GYV+ G AL + +M + N+V+++S
Sbjct: 187 SGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
V+ ACA LG L GK +H + V L L +LIDMY+KCGS+ A VF S
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 408 -DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
DA+ W+++I HG E++ + KM + I PD IT + +L+ACS GLV E
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 366
Query: 467 YNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHG 526
+ SL +P E AC+VD+L R+G + A +FI MP+ P S+ G+LL + HG
Sbjct: 367 FKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 527 NSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWI 586
N + + L+EL+P N Y+ L+N YA K++ +R M+++G+KK+ G S +
Sbjct: 426 NLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSIL 485
Query: 587 TISGNTHSFAVGDKAHPSSSLIYDML 612
+ G H F DK H S IY +L
Sbjct: 486 DLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 190/427 (44%), Gaps = 45/427 (10%)
Query: 45 QCHAQILTNGFAQN-PFLTTRL-VSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
+ H ++T G ++ PF++ L SA ++SGD++ + + Y WN +I G+
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+R ++ ++ +M R +LPD T + K S L + G +
Sbjct: 86 SRNPEKSISVYIQMLRF----GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEW 141
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FASTS 215
N+++ MY + A K+FDEMP +N+ ++N ++ +A G+ F S
Sbjct: 142 DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 216 GGD--------------------LWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYG 255
D L F + M+ A+ T+ S++ C G + G
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVI-CACAHLGALNRG 260
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ--MKSRNLYVWTAMI 313
+ +H Y+ LD+ + V L +SLIDMY++ + + VF + +K + +W A+I
Sbjct: 261 KTVHRYI----LDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
G +G ++L L +M+ + + P++++ + +L AC+ GGL V + H F + E
Sbjct: 317 GGLASHGFIRESLQLFHKMR-ESKIDPDEITFLCLLAACS-HGGL-VKEAWHFFKSLKES 373
Query: 374 NGD--TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
+ + + ++D+ S+ G + A + ++++ HG E A
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 432 YQKMLQL 438
+K+++L
Sbjct: 434 GKKLIEL 440
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 11/215 (5%)
Query: 34 TVDHRAHRLTQQCHAQILTNGFAQNPFLT-TRLVSAYATSGDLNMSRLVFHSIEAKNVYL 92
T+ H Q A+ L + +T ++ AYA SGD+ +RLVF + ++V
Sbjct: 148 TLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVT 207
Query: 93 WNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP 152
W+S+I+GYVK E+ AL +F +M R ++ T+ ++ L L GK +
Sbjct: 208 WSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA---NEVTMVSVICACAHLGALNRGKTVH 264
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS--FNVMISGWASLGN 210
S++ MY++CG GDA VF + + +N +I G AS G
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 324
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVC 245
+ F +M+ + D T LL C
Sbjct: 325 IRESLQ-----LFHKMRESKIDPDEITFLCLLAAC 354
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 307 YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA 366
Y W +I G+ + PE ++ + +M ++ G+ P+ ++ ++ + + L +G +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQM-LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 367 FSTKVELNGDTSLFNALI-------------------------------DMYSKCGSLDY 395
K L D + N LI D Y+K G +
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDMITVVSVLSAC 454
A VFD +S RD +TWSSMI Y G +A+ + +M+++G K + +T+VSV+ AC
Sbjct: 193 ARLVFDEMSE-RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE-FIKGMPLDPGPS 513
+ G ++ G ++ I + TV + ++DM + G + A F + +
Sbjct: 252 AHLGALNRGKTVHR-YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 514 VWGSLLTASVMHG 526
+W +++ HG
Sbjct: 311 MWNAIIGGLASHG 323
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 230/421 (54%), Gaps = 18/421 (4%)
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGR 256
++N++ G++S + + +W + M+ G + T LL C G GR
Sbjct: 80 TWNMLSRGYSS----SDSPVESIW-VYSEMKRRGIKPNKLTFPFLLKACASFLG-LTAGR 133
Query: 257 ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGY 316
++ ++K+G D DV++G++LI +Y KK +R+VFD+M RN+ W +++
Sbjct: 134 QIQVEVLKHGFDF----DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 317 VQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGD 376
V+NG EM K P++ +++ +L AC G L +GK +H+ EL +
Sbjct: 190 VENGKLNLVFECFCEMIGKR-FCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELN 246
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKML 436
L AL+DMY+K G L+YA VF+ + ++ TWS+MI +G EEA+ + KM+
Sbjct: 247 CRLGTALVDMYAKSGGLEYARLVFERMVD-KNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Query: 437 -QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQ 495
+ ++P+ +T + VL ACS +GLVD+G ++ + +++KP + +VD+LGR+G+
Sbjct: 306 KESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 496 LDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRC---LLELEPENPSNYISL 552
L++A +FIK MP +P VW +LL+A +H + + + L+ELEP+ N + +
Sbjct: 366 LNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 553 SNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDML 612
+N +A + W EVR +MKE +KK+ G S + + G+ H F G IY++L
Sbjct: 426 ANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Query: 613 D 613
D
Sbjct: 486 D 486
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 181/382 (47%), Gaps = 21/382 (5%)
Query: 45 QCHAQILTNGFAQNPFLTTRLV--SAYATSGDLNMSR-LVFHSIEAKNVYLWNSLINGYV 101
Q H QI + + F+ + LV S+ + + DL +R L+ HS ++ WN L GY
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS-TPSTWNMLSRGYS 89
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
+ ++ ++ EM R + P+ T + K L G+ I +
Sbjct: 90 SSDSPVESIWVYSEMKRRG----IKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFD 145
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+++ +Y C + DA KVFDEM +RNV S+N +++ G C
Sbjct: 146 FDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV----FEC 201
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F M + + D T+ LL C G G+ +H ++ L+L + LG++L
Sbjct: 202 FC-EMIGKRFCPDETTMVVLLSAC---GGNLSLGKLVHSQVMVRELEL----NCRLGTAL 253
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+DMY++S L +R VF++M +N++ W+AMI G Q G E+AL L +M + +RPN
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 342 KVSLISVLPACALLGGLIVG-KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
V+ + VL AC+ G + G K H ++ + A++D+ + G L+ A
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFI 373
Query: 401 DNVSYFRDAITWSSMISAYGLH 422
+ + DA+ W +++SA +H
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIH 395
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
S +K L +R + W + GY + +P +++ + EM+ + G++PNK++
Sbjct: 58 SLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMK-RRGIKPNKLTF 116
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
+L ACA GL G+QI K + D + N LI +Y C A +VFD ++
Sbjct: 117 PFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE 176
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
R+ ++W+S+++A +G+ + +M+ PD T+V +LSAC G + G
Sbjct: 177 -RNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKL 233
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH 525
+++ ++ R +++ + +VDM +SG L+ A + M +D W +++ +
Sbjct: 234 VHSQVMVR-ELELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQY 291
Query: 526 G 526
G
Sbjct: 292 G 292
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q ++L +GF + ++ L+ Y T + +R VF + +NV WNS++ V+N
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ F EM G PD+ T+ + G +L GKL+ +
Sbjct: 193 GKLNLVFECFCEM----IGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELN 246
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+++ MY++ G A VF+ M +NV +++ MI G A G FA + L F
Sbjct: 247 CRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYG-FAEEA---LQLFS 302
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYG 255
+ M+ + T +L C TG D G
Sbjct: 303 KMMKESSVRPNYVTFLGVL-CACSHTGLVDDG 333
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 288/613 (46%), Gaps = 123/613 (20%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
LV+ +GD+ ++ VF ++ +++V WN++I GY++N A +LF +M +
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN---- 230
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
++ S +VYG Y R G+ +A
Sbjct: 231 ---------VVTWTS-----MVYG-------------------------YCRYGDVREAY 251
Query: 185 KVFDEMPQRNVGSFNVMISG--WASLGNFASTSGGDLWCFFR-RMQCEGYNADAFTIASL 241
++F EMP+RN+ S+ MISG W L A L F + + + + T+ SL
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNELYREA------LMLFLEMKKDVDAVSPNGETLISL 305
Query: 242 LPVCCGKTGKW-DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS-------------- 286
C G ++ G +LH ++ NG + + D L SL+ MY+
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNGWE-TVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 287 ----RSKKLVLSR-----------RVFDQMKSRNLYV-WTAMINGYVQNGAPEDALILLR 330
+S ++++R +F+++KS + V WT+MI+GY++ G A L +
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 331 EMQMKDGMR--------------PNKVSLISVLPACAL----------------LGGLIV 360
++ KDG+ SL+S + C L L
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 361 GKQIHAFSTKVELNGDTSLF--NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
GK IH K D L N+L+ MY+KCG+++ A +F + +D ++W+SMI
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ-KDTVSWNSMIMG 543
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
HG ++A+ +++ML G KP+ +T + VLSACS SGL+ G+ ++ ++ Y ++P
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMH-----GNSMTRDL 533
++ ++D+LGR+G+L +A EFI +P P +V+G+LL ++ +
Sbjct: 604 GIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERA 663
Query: 534 AYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTH 593
A R LLEL+P N +++L N YA R D+ E+R M +G+KK PG SW+ ++G +
Sbjct: 664 AMR-LLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRAN 722
Query: 594 SFAVGDKAHPSSS 606
F GDK+ ++
Sbjct: 723 VFLSGDKSASEAA 735
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 128/293 (43%), Gaps = 62/293 (21%)
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQC 228
S+++ Y++ G +A +F+ MP+RN+ + N M++G+ + W FR M
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRM-----NEAWTLFREMP- 135
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
N ++T+ +L C G+ + EL D +V ++L+ R+
Sbjct: 136 --KNVVSWTV--MLTALC-DDGRSEDAVEL--------FDEMPERNVVSWNTLVTGLIRN 182
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+ +++VFD M SR++ W AMI GY++N E+A +L +M K
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK------------- 229
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRD 408
+ + +++ Y + G + A R+F + R+
Sbjct: 230 ---------------------------NVVTWTSMVYGYCRYGDVREAYRLFCEMPE-RN 261
Query: 409 AITWSSMISAYGLHGRGEEAVVTYQKMLQ--LGIKPDMITVVSVLSACSKSGL 459
++W++MIS + + EA++ + +M + + P+ T++S+ AC G+
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
T ++ Y +GD++ + +F + K+ W +I+G V+N F A L +M R
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVR---- 459
Query: 123 DCVL-PDDYTLATISKVSGELQDLVYGKLIPG--KSXXXXXXXXXXXANSVMAMYSRCGE 179
C L P + T + + +G +L GK I NS+++MY++CG
Sbjct: 460 -CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
DA ++F +M Q++ S+N MI G + G A + F+ M G ++ T
Sbjct: 519 IEDAYEIFAKMVQKDTVSWNSMIMGLSHHG-LADKALN----LFKEMLDSGKKPNSVTFL 573
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKL 291
+L C +G G EL +K ++ G D ++ S+ID+ R+ KL
Sbjct: 574 GVLSA-CSHSGLITRGLELF-KAMKETYSIQPGIDHYI--SMIDLLGRAGKL 621
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
+SL+ Y+++ L +R +F+ M RN+ AM+ GYV+ +A L REM
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP----- 135
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
N VS +L A G + F E N +N L+ + G ++ A +
Sbjct: 136 -KNVVSWTVMLTALCDDGR--SEDAVELFDEMPERN--VVSWNTLVTGLIRNGDMEKAKQ 190
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
VFD + RD ++W++MI Y + EEA + + M + +++T S++ + G
Sbjct: 191 VFDAMPS-RDVVSWNAMIKGYIENDGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYG 245
Query: 459 LVDEGMGIYNSLITR 473
V E ++ + R
Sbjct: 246 DVREAYRLFCEMPER 260
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 242/456 (53%), Gaps = 47/456 (10%)
Query: 167 ANSVMAMY-SRCGEFGD---AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
+N ++A + S CG + A +VF + NV FN MI ++ +G + F
Sbjct: 35 SNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLES-----LSF 89
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F M+ G AD +T A LL C +G+ +H L++ G ++G + +G ++
Sbjct: 90 FSSMKSRGIWADEYTYAPLLK-SCSSLSDLRFGKCVHGELIRTGFH-RLGK-IRIG--VV 144
Query: 283 DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMK------- 335
++Y+ ++ +++VFD+M RN+ VW MI G+ +G E L L ++M +
Sbjct: 145 ELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNS 204
Query: 336 -----------------------DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
G P++ ++++VLP A LG L GK IH+ +
Sbjct: 205 MISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG 264
Query: 373 LNGD-TSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
L D ++ NAL+D Y K G L+ A+ +F + R+ ++W+++IS ++G+GE +
Sbjct: 265 LFKDFITVGNALVDFYCKSGDLEAATAIFRKMQR-RNVVSWNTLISGSAVNGKGEFGIDL 323
Query: 432 YQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
+ M++ G + P+ T + VL+ CS +G V+ G ++ ++ R++++ E +VD++
Sbjct: 324 FDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLM 383
Query: 491 GRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYI 550
RSG++ +A +F+K MP++ ++WGSLL+A HG+ ++A L+++EP N NY+
Sbjct: 384 SRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYV 443
Query: 551 SLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWI 586
LSN YA RW V +VRT+MK+ L+K G S I
Sbjct: 444 LLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 197/437 (45%), Gaps = 35/437 (8%)
Query: 29 ELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK 88
+LL+L H + HA +L + + L +S + + + + VF I+
Sbjct: 6 KLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP 65
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
NV ++N++I Y +L F M +S G + D+YT A + K L DL +G
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSM-KSRG---IWADEYTYAPLLKSCSSLSDLRFG 121
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISG---- 204
K + G+ V+ +Y+ G GDA KVFDEM +RNV +N+MI G
Sbjct: 122 KCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS 181
Query: 205 --------------------WASLGNFASTSGGDLWCF--FRRMQCEGYNADAFTIASLL 242
W S+ + S G D F M +G++ D T+ ++L
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
P+ G D G+ +H +GL + +G++L+D Y +S L + +F +M+
Sbjct: 242 PIS-ASLGVLDTGKWIHSTAESSGL---FKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
RN+ W +I+G NG E + L M + + PN+ + + VL C+ G + G+
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 363 QIHAF-STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
++ + +L T + A++D+ S+ G + A + N+ +A W S++SA
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRS 417
Query: 422 HGRGEEAVVTYQKMLQL 438
HG + A V +++++
Sbjct: 418 HGDVKLAEVAAMELVKI 434
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 219/410 (53%), Gaps = 32/410 (7%)
Query: 247 GKTGKWDYGRELHCYLVKNGLD---------LKM------------------GSDVHLGS 279
G+ G+ GR+LH ++K GL+ L M G DV +
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
S+I +++ + ++ +FD+M RN W +MI+G+V+NG +DAL + REMQ KD ++
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD-VK 255
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
P+ +++S+L ACA LG G+ IH + + ++ + ALIDMY KCG ++ V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 400 FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
F+ + W+SMI +G E A+ + ++ + G++PD ++ + VL+AC+ SG
Sbjct: 316 FECAPK-KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLL 519
V + + +Y ++P+++ +V++LG +G L++A IK MP++ +W SLL
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Query: 520 TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
+A GN A +CL +L+P+ Y+ LSN YASY ++ E R +MKER ++K
Sbjct: 435 SACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEK 494
Query: 580 VPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL---VAIMTDGCADM 626
G S I + H F HP S+ IY +LD L V+ + G A++
Sbjct: 495 EVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGFAEL 544
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 50/483 (10%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVS-AYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
R +Q HA ++ G + +R+++ A+ D+N + LVF I KN ++WN++I G
Sbjct: 39 RELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRG 98
Query: 100 YVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXX 159
+ ++ A+ +F +M S V P T ++ K G L G+ + G
Sbjct: 99 FSRSSFPEMAISIFIDMLCSSPS--VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 160 XXXXXXXANSVMAMY-------------------------------SRCGEFGDAMKVFD 188
N+++ MY ++CG A +FD
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 189 EMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGK 248
EMPQRN S+N MISG+ G F D FR MQ + D FT+ SLL C
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFK-----DALDMFREMQEKDVKPDGFTMVSLLNA-CAY 270
Query: 249 TGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV 308
G + GR +H Y+V+N +L + + ++LIDMY + + VF+ + L
Sbjct: 271 LGASEQGRWIHEYIVRNRFEL----NSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ-IHAF 367
W +MI G NG E A+ L E++ + G+ P+ VS I VL ACA G + +
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 368 STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
K + + ++++ G L+ A + N+ D + WSS++SA G E
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLS-ACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
A + + +L PD +LS A + GL +E + L+ QM+ V +
Sbjct: 446 AKRAAKCLKKL--DPDETCGYVLLSNAYASYGLFEEAVE-QRLLMKERQMEKEVGCSSIE 502
Query: 487 VDM 489
VD
Sbjct: 503 VDF 505
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 200/380 (52%), Gaps = 37/380 (9%)
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRV 297
+ SL C + G +H + VK+ S+ +G +L+DMY + + +R++
Sbjct: 50 VFSLALKSCAAAFRPVLGGSVHAHSVKSNFL----SNPFVGCALLDMYGKCLSVSHARKL 105
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQM-----------------KDG--- 337
FD++ RN VW AMI+ Y G ++A+ L M + +DG
Sbjct: 106 FDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR 165
Query: 338 ------------MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
+PN ++L++++ AC+ +G + K+IH+++ + + L + L++
Sbjct: 166 AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVE 225
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMI 445
Y +CGS+ Y VFD++ RD + WSS+ISAY LHG E A+ T+Q+M + PD I
Sbjct: 226 AYGRCGSIVYVQLVFDSMED-RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKG 505
++VL ACS +GL DE + + + Y ++ + + +C+VD+L R G+ ++A + I+
Sbjct: 285 AFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQA 344
Query: 506 MPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVV 565
MP P WG+LL A +G ++A R LL +EPENP+NY+ L Y S R +
Sbjct: 345 MPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEA 404
Query: 566 TEVRTMMKERGLKKVPGISW 585
+R MKE G+K PG SW
Sbjct: 405 ERLRLKMKESGVKVSPGSSW 424
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 26 NLLELLQLTVDHRA---HRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVF 82
NL+ LL L A RL ++ H+ N +P L + LV AY G + +LVF
Sbjct: 181 NLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 83 HSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGEL 142
S+E ++V W+SLI+ Y + + AL F+EM + V PDD + K
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK----VTPDDIAFLNVLKACSHA 296
Query: 143 ----QDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR 193
+ LVY K + G V+ SR G F +A KV MP++
Sbjct: 297 GLADEALVYFKRMQGDYGLRASKDHYSCLVDVL---SRVGRFEEAYKVIQAMPEK 348
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 184/326 (56%), Gaps = 8/326 (2%)
Query: 293 LSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
L+++V +N+ W MI GYV+N E+AL L+ M ++PNK S S L AC
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 353 ALLGGLIVGKQIHAF--STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAI 410
A LG L K +H+ + +ELN S +AL+D+Y+KCG + + VF +V D
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILS--SALVDVYAKCGDIGTSREVFYSVKR-NDVS 232
Query: 411 TWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSL 470
W++MI+ + HG EA+ + +M + PD IT + +L+ CS GL++EG + +
Sbjct: 233 IWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLM 292
Query: 471 ITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMT 530
R+ ++P +E +VD+LGR+G++ +A E I+ MP++P +W SLL++S + N
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPEL 352
Query: 531 RDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISG 590
++A + L +Y+ LSN Y+S K+W+ +VR +M + G++K G SW+ G
Sbjct: 353 GEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGG 409
Query: 591 NTHSFAVGDKAHPSSSLIYDMLDDLV 616
H F GD +H + IY +L+ L+
Sbjct: 410 MIHRFKAGDTSHIETKAIYKVLEGLI 435
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 126/269 (46%), Gaps = 11/269 (4%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N ++ + GE G A KV +NV ++N+MI G+ + L +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEA----LKALKNMLS 157
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
+ F+ AS L C + G + + +H ++ +G++L + L S+L+D+Y++
Sbjct: 158 FTDIKPNKFSFASSLAAC-ARLGDLHHAKWVHSLMIDSGIEL----NAILSSALVDVYAK 212
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ SR VF +K ++ +W AMI G+ +G +A+ + EM+ + + P+ ++ +
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA-EHVSPDSITFLG 271
Query: 348 VLPACALLGGLIVGKQIHAF-STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
+L C+ G L GK+ S + + + A++D+ + G + A + +++
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 407 RDAITWSSMISAYGLHGRGEEAVVTYQKM 435
D + W S++S+ + E + Q +
Sbjct: 332 PDVVIWRSLLSSSRTYKNPELGEIAIQNL 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 135/326 (41%), Gaps = 54/326 (16%)
Query: 45 QCHAQILTNGFAQNPFLTTRLVSAYATS-------------------------------- 72
Q HAQI G+ P L V+AY
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 73 -GDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYT 131
G+ +++ V + +NV WN +I GYV+N ++ AL + M + P+ ++
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD---IKPNKFS 167
Query: 132 LATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP 191
A+ L DL + K + +++++ +Y++CG+ G + +VF +
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVC--CG-- 247
+ +V +N MI+G+A+ G + F M+ E + D+ T LL C CG
Sbjct: 228 RNDVSIWNAMITGFATHG-----LATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 248 KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK-SRNL 306
+ GK +G + ++ L+ H G +++D+ R+ ++ + + + M ++
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLE-------HYG-AMVDLLGRAGRVKEAYELIESMPIEPDV 334
Query: 307 YVWTAMINGYVQNGAPEDALILLREM 332
+W ++++ PE I ++ +
Sbjct: 335 VIWRSLLSSSRTYKNPELGEIAIQNL 360
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 280/562 (49%), Gaps = 25/562 (4%)
Query: 43 TQQCHAQILTNGFAQ-NPFLTTRLV--SAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
+Q HAQ++ N + P L + + + + + + + + + W L+
Sbjct: 19 AKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRF 78
Query: 100 YVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXX 159
++R+F + ++ +M S + P + + ++ + G+++++V GK I ++
Sbjct: 79 LSQHRKFKETVDVYIDMHNSG----IPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNG 134
Query: 160 XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGN-------FA 212
++ +YSR G A K FD++ ++N S+N ++ G+ G F
Sbjct: 135 LCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFD 194
Query: 213 STSGGDL--W-CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL 269
D W +G +A ++ S +P+ + G ++C +K
Sbjct: 195 KIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTY 254
Query: 270 KMGSDVHLGSSLIDM---YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
G S I M Y++ + + +F M ++ V+ AMI Y QNG P+DAL
Sbjct: 255 FDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDAL 314
Query: 327 ILLREMQMKDG-MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
L +M ++ ++P++++L SV+ A + LG G + ++ T+ + D L +LID
Sbjct: 315 KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLID 374
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMI 445
+Y K G A ++F N++ +D +++S+MI G++G EA + M++ I P+++
Sbjct: 375 LYMKGGDFAKAFKMFSNLNK-KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVV 433
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKG 505
T +LSA S SGLV EG +NS+ + ++P+ + +VDMLGR+G+L++A E IK
Sbjct: 434 TFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKS 492
Query: 506 MPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYIS-LSNTYASYKRWDV 564
MP+ P VWG+LL AS +H N ++A ++LE + P+ Y+S L+ Y+S RWD
Sbjct: 493 MPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETD-PTGYLSHLAMIYSSVGRWDD 551
Query: 565 VTEVRTMMKERGLKKVPGISWI 586
VR +KE+ L K G SW+
Sbjct: 552 ARTVRDSIKEKKLCKTLGCSWV 573
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 130/286 (45%), Gaps = 13/286 (4%)
Query: 253 DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAM 312
+ +++H LV N + VH +SR+ + +R+ + + W +
Sbjct: 17 EQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNI-VTYVKRILKGFNGHDSFSWGCL 75
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
+ Q+ ++ + + +M G+ P+ ++ SVL AC + ++ GK IHA + K
Sbjct: 76 VRFLSQHRKFKETVDVYIDMH-NSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNG 134
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
L G + L+ +YS+ G ++ A + FD+++ ++ ++W+S++ Y G +EA +
Sbjct: 135 LCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE-KNTVSWNSLLHGYLESGELDEARRVF 193
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
K+ + D ++ ++S+ +K G + +++++ + + I V
Sbjct: 194 DKIPE----KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV-----N 244
Query: 493 SGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL 538
++ A + MP G S W ++++ G+ + + +R +
Sbjct: 245 CREMKLARTYFDAMPQKNGVS-WITMISGYTKLGDVQSAEELFRLM 289
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 184/337 (54%), Gaps = 8/337 (2%)
Query: 255 GRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMIN 314
G+ELH V+ G D S I +Y ++ + +R+VFD+ R L W A+I
Sbjct: 136 GKELHSVAVRLGFV----GDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH--AFSTKVE 372
G G +A+ + +M+ + G+ P+ +++SV +C LG L + Q+H K E
Sbjct: 192 GLNHAGRANEAVEMFVDMK-RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
D + N+LIDMY KCG +D AS +F+ + R+ ++WSSMI Y +G EA+ +
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ-RNVVSWSSMIVGYAANGNTLEALECF 309
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
++M + G++P+ IT V VLSAC GLV+EG + + + ++++P + C+VD+L R
Sbjct: 310 RQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSR 369
Query: 493 SGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISL 552
GQL +A + ++ MP+ P VWG L+ G+ + ++ELEP N Y+ L
Sbjct: 370 DGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVL 429
Query: 553 SNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITIS 589
+N YA W V VR +MK + + K+P S+ + +
Sbjct: 430 ANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYASTT 466
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 189/387 (48%), Gaps = 17/387 (4%)
Query: 63 TRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGG 122
T L GD+ SR++ A +LWN+++ Y+++ A+ ++ M RS
Sbjct: 58 TSLARVRRIHGDIFRSRILDQYPIA---FLWNNIMRSYIRHESPLDAIQVYLGMVRS--- 111
Query: 123 DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGD 182
VLPD Y+L + K + ++ D GK + + + + +Y + GEF +
Sbjct: 112 -TVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFEN 170
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
A KVFDE P+R +GS+N +I G G + F M+ G D FT+ S +
Sbjct: 171 ARKVFDENPERKLGSWNAIIGGLNHAGR-----ANEAVEMFVDMKRSGLEPDDFTMVS-V 224
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
CG G +LH +++ + K SD+ + +SLIDMY + ++ L+ +F++M+
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEK--SDIMMLNSLIDMYGKCGRMDLASHIFEEMR 282
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
RN+ W++MI GY NG +AL R+M+ + G+RPNK++ + VL AC G + GK
Sbjct: 283 QRNVVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 363 QIHA-FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGL 421
A ++ EL S + ++D+ S+ G L A +V + + + + W ++
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVV 448
G E A M++L D + VV
Sbjct: 402 FGDVEMAEWVAPYMVELEPWNDGVYVV 428
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 22/290 (7%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
L ++ H+ + GF + F + ++ Y +G+ +R VF + + WN++I G
Sbjct: 135 LGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDL-----VYGKLIPGKSX 156
A+ +F +M RS + PDD+T+ +++ G L DL ++ ++ K+
Sbjct: 195 HAGRANEAVEMFVDMKRSG----LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 157 XXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSG 216
NS++ MY +CG A +F+EM QRNV S++ MI G+A+ GN
Sbjct: 251 EKSDIMML---NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA-- 305
Query: 217 GDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVH 276
L C FR+M+ G + T +L C G + G+ + ++K+ +L+ G H
Sbjct: 306 --LEC-FRQMREFGVRPNKITFVGVLSACV-HGGLVEEGKT-YFAMMKSEFELEPGLS-H 359
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWTAMINGYVQNGAPEDA 325
G ++D+ SR +L +++V ++M + N+ VW ++ G + G E A
Sbjct: 360 YG-CIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 131/269 (48%), Gaps = 11/269 (4%)
Query: 281 LIDMYSRSKKLVLSRRVF-DQMKSRNL------YVWTAMINGYVQNGAPEDALILLREMQ 333
L + S L RR+ D +SR L ++W ++ Y+++ +P DA+ + M
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGM- 108
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
++ + P++ SL V+ A + +GK++H+ + ++ GD + I +Y K G
Sbjct: 109 VRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEF 168
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+ A +VFD + R +W+++I GR EAV + M + G++PD T+VSV ++
Sbjct: 169 ENARKVFDE-NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTAS 227
Query: 454 CSKSGLVDEGMGIYNSLI-TRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
C G + ++ ++ + + K + + ++DM G+ G++D A + M
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 513 SVWGSLLTASVMHGNSMTRDLAYRCLLEL 541
S W S++ +GN++ +R + E
Sbjct: 288 S-WSSMIVGYAANGNTLEALECFRQMREF 315
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 225/411 (54%), Gaps = 21/411 (5%)
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F R + D+F++ + V + GR++H + K G + + + + +SL
Sbjct: 51 FRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFN----AVIQIQTSL 106
Query: 282 IDMYSRSKKLVLSRRVFDQM-KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
+ YS + +R+VFD+ + +N+ +WTAMI+ Y +N +A+ L + M+ + +
Sbjct: 107 VGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME-AEKIEL 165
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVE--LNGDTSLFNALIDMYSKCGSLDYASR 398
+ V + L ACA LG + +G++I++ S K + L D +L N+L++MY K G + A +
Sbjct: 166 DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARK 225
Query: 399 VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG------IKPDMITVVSVLS 452
+FD S +D T++SMI Y L+G+ +E++ ++KM + I P+ +T + VL
Sbjct: 226 LFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 453 ACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
ACS SGLV+EG + S+I Y +KP C+VD+ RSG L A EFI MP+ P
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 513 SVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMM 572
+W +LL A +HGN + R + EL+ ++ +Y++LSN YAS WD +++R +
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
Query: 573 KERGLKKVPGISWITISGNTHSFAVGDKAHPSSSL---IYDMLDDLVAIMT 620
++R ++PG SWI + + F G + + I ++L LV+ MT
Sbjct: 405 RKR---RMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCLVSCMT 452
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 173/402 (43%), Gaps = 63/402 (15%)
Query: 18 ATAFITPHNLLELLQLTVDHRAHRLT-QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLN 76
+ +F+ ++L ++++ +A L +Q HA + GF + T LV Y++ GD++
Sbjct: 58 SPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVD 117
Query: 77 MSRLVF-HSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI 135
+R VF + E +N+ LW ++I+ Y +N A+ LF+ M + + D +
Sbjct: 118 YARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME----AEKIELDGVIVTVA 173
Query: 136 SKVSGELQDLVYGKLIPGKSXXXXXXXXXXXA--NSVMAMYSRCGEFGDAMKVFDEMPQR 193
+L + G+ I +S NS++ MY + GE A K+FDE ++
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 194 NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADA------FTIASLLPVCCG 247
+V ++ MI G+A G + F++M+ + D T +L C
Sbjct: 234 DVTTYTSMIFGYALNGQAQES-----LELFKKMKTIDQSQDTVITPNDVTFIGVLMACS- 287
Query: 248 KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLY 307
H LV+ G H S ++D +K R +
Sbjct: 288 -----------HSGLVEEG-------KRHFKSMIMDY---------------NLKPREAH 314
Query: 308 VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA- 366
+ M++ + ++G +DA + +M +K PN V ++L AC+L G + +G+++
Sbjct: 315 -FGCMVDLFCRSGHLKDAHEFINQMPIK----PNTVIWRTLLGACSLHGNVELGEEVQRR 369
Query: 367 -FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
F + GD + AL ++Y+ G D S++ D V R
Sbjct: 370 IFELDRDHVGD---YVALSNIYASKGMWDEKSKMRDRVRKRR 408
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 282/589 (47%), Gaps = 49/589 (8%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLI 97
++ L + HAQ+L GF + + R + Y SG + + +F I KN WN +
Sbjct: 18 KSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCL 77
Query: 98 NGYVKNREFGHALVLFREM------------------GRSHGGDCVL---------PDDY 130
G KN +AL LF EM G G V P ++
Sbjct: 78 KGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 131 TLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXA-NSVMAMYSRCGEFGDAMKVFDE 189
T + ++ + ++ +G+ I G + NSVM MY R G F A+ VF
Sbjct: 138 TFSILASLVTCVR---HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 190 MPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKT 249
M R+V S+N +I + GN D + R M+ + D +T++ ++ +C
Sbjct: 195 MEDRDVVSWNCLILSCSDSGN--KEVALDQFWLMREMEIQ---PDEYTVSMVVSIC-SDL 248
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVW 309
+ G++ +K G + + + LG+ IDM+S+ +L S ++F +++ + +
Sbjct: 249 RELSKGKQALALCIKMGF---LSNSIVLGAG-IDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV--GKQIHAF 367
+MI Y + EDAL L + M +RP+K + SVL + + +++ G +H+
Sbjct: 305 NSMIGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSS---MNAVMLDHGADVHSL 360
Query: 368 STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEE 427
K+ + DT++ +L++MY K GS+D A VF +D I W+++I + R E
Sbjct: 361 VIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDG-KDLIFWNTVIMGLARNSRAVE 419
Query: 428 AVVTYQKML-QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
++ + ++L +KPD +T++ +L AC +G V+EG+ I++S+ + + P E AC+
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI 479
Query: 487 VDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENP 546
+++L R G +++A + +P +P +W +L AS+ G++ + + +LE EP++
Sbjct: 480 IELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSS 539
Query: 547 SNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSF 595
Y+ L Y RW+ ++R M E LK G S I+I + SF
Sbjct: 540 FPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 183/325 (56%), Gaps = 16/325 (4%)
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQ-----NGAPEDALILLRE 331
+G++L+ Y+++ L +R+VFD+M R W AMI GY N A++L R
Sbjct: 149 IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRR 208
Query: 332 MQM-KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF--NALIDMYS 388
G+RP +++ VL A + G L +G +H + K+ + +F AL+DMYS
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYS 268
Query: 389 KCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVV 448
KCG L+ A VF+ + ++ TW+SM + L+GRG E +M + GIKP+ IT
Sbjct: 269 KCGCLNNAFSVFE-LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL 508
S+LSA GLV+EG+ ++ S+ TR+ + P +E C+VD+LG++G++ +A +FI MP+
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 509 DPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENP-------SNYISLSNTYASYKR 561
P + SL A ++G ++ + + LLE+E E+ +Y++LSN A +
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGK 447
Query: 562 WDVVTEVRTMMKERGLKKVPGISWI 586
W V ++R MKER +K PG S++
Sbjct: 448 WVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 14/269 (5%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
+++ Y++ G+ A KVFDEMP+R ++N MI G+ S + + + FRR
Sbjct: 150 GTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRF 209
Query: 227 QC--EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
C G T+ +L +TG + G +H Y+ K G ++ DV +G++L+DM
Sbjct: 210 SCCGSGVRPTDTTMVCVLSAI-SQTGLLEIGSLVHGYIEKLGFTPEV--DVFIGTALVDM 266
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
YS+ L + VF+ MK +N++ WT+M G NG + LL M + G++PN+++
Sbjct: 267 YSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA-ESGIKPNEIT 325
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL---FNALIDMYSKCGSLDYASRVFD 401
S+L A +G +V + I F + G T + + ++D+ K G + A +
Sbjct: 326 FTSLLSAYRHIG--LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 402 NVSYFRDAITWSSMISAYGLHGR---GEE 427
+ DAI S+ +A ++G GEE
Sbjct: 384 AMPIKPDAILLRSLCNACSIYGETVMGEE 412
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 41 RLTQQCHAQILTNGFA-QNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLING 99
R+ + H + GF ++ + T L+ YA +GDL +R VF + + WN++I G
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 100 YVKNREFGH-----ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPG- 153
Y +++ G+ A+VLFR S G V P D T+ + + L G L+ G
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRF--SCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 154 -KSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFA 212
+ +++ MYS+CG +A VF+ M +NV ++ M +G A G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR-- 303
Query: 213 STSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG 272
G + RM G + T SLL H LV+ G++L
Sbjct: 304 ---GNETPNLLNRMAESGIKPNEITFTSLLSA------------YRHIGLVEEGIEL--- 345
Query: 273 SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGY-------VQNGAPEDA 325
F MK+R + T +I Y + G ++A
Sbjct: 346 -------------------------FKSMKTR--FGVTPVIEHYGCIVDLLGKAGRIQEA 378
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
+ M +K P+ + L S+ AC++ G ++G++I
Sbjct: 379 YQFILAMPIK----PDAILLRSLCNACSIYGETVMGEEI 413
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 239/507 (47%), Gaps = 47/507 (9%)
Query: 42 LTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYV 101
+++Q H G + L+SAY G+ +M+ +F + ++ WN++I
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 102 KNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
K+ AL LF M HG P+ T ++ VS +Q L G+ I G
Sbjct: 293 KSENPLKALKLFVSMPE-HGFS---PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 162 XXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC 221
N+++ Y++CG D+ FD + +N+ +N ++SG +A+ G
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG------YANKDGPICLS 402
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNG--------------- 266
F +M G+ +T ++ L CC + +LH +V+ G
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALKSCCVTELQ-----QLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 267 ------------LDLKMGSDVHLGSSLI-DMYSRSKKLVLSRRVFDQMKSRNLYVWTAMI 313
LD G + +++ +YSR + S ++ ++ + W I
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
++ E+ + L + M ++ +RP+K + +S+L C+ L L +G IH TK +
Sbjct: 518 AACSRSDYHEEVIELFKHM-LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDF 576
Query: 374 N-GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
+ DT + N LIDMY KCGS+ +VF+ ++ ITW+++IS G+HG G+EA+ +
Sbjct: 577 SCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE-KNLITWTALISCLGIHGYGQEALEKF 635
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
++ L LG KPD ++ +S+L+AC G+V EGMG++ + Y ++P ++ C VD+L R
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLAR 694
Query: 493 SGQLDQALEFIKGMPLDPGPSVWGSLL 519
+G L +A I+ MP VW + L
Sbjct: 695 NGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 177/361 (49%), Gaps = 27/361 (7%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
N+++++Y + GE A KVFD+MP+RN SFN +I G++ G+ W F M
Sbjct: 52 CNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKA-----WGVFSEM 106
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG---SDVHLGSSLID 283
+ GY + T++ LL + G +LH GL LK G +D +G+ L+
Sbjct: 107 RYFGYLPNQSTVSGLLSC---ASLDVRAGTQLH------GLSLKYGLFMADAFVGTCLLC 157
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+Y R L ++ +VF+ M ++L W M++ G ++ + RE+ ++ G +
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFREL-VRMGASLTES 216
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
S + VL + + L + KQ+H +TK L+ + S+ N+LI Y KCG+ A R+F +
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 404 SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ D ++W+++I A +A+ + M + G P+ T VSVL S L+ G
Sbjct: 277 GSW-DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA---LEFIKGMPLDPGPSVWGSLLT 520
I+ LI + + + + ++D + G L+ + ++I+ D W +LL+
Sbjct: 336 RQIHGMLI-KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR----DKNIVCWNALLS 390
Query: 521 A 521
Sbjct: 391 G 391
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 30/443 (6%)
Query: 25 HN--LLELLQLTVDHRAHRLTQQCHAQILT--NGFAQNPFLTTRLVSAYATSGDLNMSRL 80
HN ++ LL + + T+ HA +T + Q ++ ++S Y G+++++
Sbjct: 11 HNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGK 70
Query: 81 VFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSG 140
VF + +N +N++I GY K + A +F EM R G LP+ T++ + +S
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM-RYFG---YLPNQSTVSGL--LSC 124
Query: 141 ELQDLVYGKLIPGKSXXXXXXXXXXXANS-VMAMYSRCGEFGDAMKVFDEMPQRNVGSFN 199
D+ G + G S + ++ +Y R A +VF++MP +++ ++N
Sbjct: 125 ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWN 184
Query: 200 VMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLP-VCCGKTGKWDYGREL 258
M+S G + FFR + G + + +L V C K D ++L
Sbjct: 185 HMMSLLGHRGFLK-----ECMFFFRELVRMGASLTESSFLGVLKGVSCVK--DLDISKQL 237
Query: 259 HCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQ 318
HC K GLD ++ + +SLI Y + ++ R+F S ++ W A+I +
Sbjct: 238 HCSATKKGLD----CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 293
Query: 319 NGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTS 378
+ P AL L M + G PN+ + +SVL +L+ L G+QIH K
Sbjct: 294 SENPLKALKLFVSMP-EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDA--ITWSSMISAYGLHGRGEEAVVTYQKML 436
L NALID Y+KCG+L+ + FD Y RD + W++++S Y + G + + +ML
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFD---YIRDKNIVCWNALLSGYA-NKDGPICLSLFLQML 408
Query: 437 QLGIKPDMITVVSVLSACSKSGL 459
Q+G +P T + L +C + L
Sbjct: 409 QMGFRPTEYTFSTALKSCCVTEL 431
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 201/398 (50%), Gaps = 35/398 (8%)
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGK-TGKWDYGRELHCYLVKNGL------------- 267
FF M+ D T + C K G + LHC ++ GL
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 268 --------------DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMI 313
D DV + LID +++++V +R +FD M R+L W ++I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
+GY Q +A+ L EM + G++P+ V+++S L ACA G GK IH ++ + L
Sbjct: 222 SGYAQMNHCREAIKLFDEM-VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 374 NGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQ 433
D+ L L+D Y+KCG +D A +F+ S + TW++MI+ +HG GE V ++
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSD-KTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 434 KMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRS 493
KM+ GIKPD +T +SVL CS SGLVDE +++ + + Y + ++ C+ D+LGR+
Sbjct: 340 KMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRA 399
Query: 494 GQLDQALEFIKGMPLDPGPS----VWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
G +++A E I+ MP D G W LL +HGN + A + L PE+ Y
Sbjct: 400 GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVY 459
Query: 550 ISLSNTYASYKRWDVVTEVRTMM-KERGLKKVPGISWI 586
+ YA+ +RW+ V +VR ++ +++ +KK G S +
Sbjct: 460 KVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 132/330 (40%), Gaps = 57/330 (17%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
L+ + ++ +R +F S+ +++ WNSLI+GY + A+ LF EM
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV----ALG 244
Query: 125 VLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAM 184
+ PD+ + + + D GK I + A ++ Y++CG AM
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 185 KVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWC-FFRRMQCEGYNADAFTIASLLP 243
++F+ + + ++N MI+G A GN G+L +FR+M G D T S+L
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGN------GELTVDYFRKMVSSGIKPDGVTFISVL- 357
Query: 244 VCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKS 303
V C +G D R L FDQM+S
Sbjct: 358 VGCSHSGLVDEARNL---------------------------------------FDQMRS 378
Query: 304 -----RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGL 358
R + + M + + G E+A ++ +M G R ++ +L C + G +
Sbjct: 379 LYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNI 438
Query: 359 IVGKQIHAFSTKVELNGDTSLFNALIDMYS 388
+ ++ A K D ++ +++MY+
Sbjct: 439 EIAEKA-ANRVKALSPEDGGVYKVMVEMYA 467
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 234/502 (46%), Gaps = 49/502 (9%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
RL +Q H ++ G++ N L T +V Y ++ +R VF I + WN ++ Y
Sbjct: 179 RLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRY 238
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
++ A+V+F +M + V P ++T++++ L GK+I +
Sbjct: 239 LEMGFNDEAVVMFFKMLELN----VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV 294
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDE------------------------------- 189
+ SV MY +C A +VFD+
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL 354
Query: 190 MPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKT 249
MP+RN+ S+N M+ G+ + F M+ E N D T+ +L VC G +
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALD-----FLTLMRQEIENIDNVTLVWILNVCSGIS 409
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKS-RNLYV 308
G++ H ++ ++G D ++V + ++L+DMY + L + F QM R+
Sbjct: 410 DV-QMGKQAHGFIYRHGYD----TNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
W A++ G + G E AL MQ++ +P+K +L ++L CA + L +GK IH F
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQVE--AKPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEA 428
+ D + A++DMYSKC DYA VF + RD I W+S+I +GR +E
Sbjct: 523 IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAAT-RDLILWNSIIRGCCRNGRSKEV 581
Query: 429 VVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
+ + G+KPD +T + +L AC + G V+ G ++S+ T+Y + P VE C+++
Sbjct: 582 FELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIE 641
Query: 489 MLGRSGQLDQALEFIKGMPLDP 510
+ + G L Q EF+ MP DP
Sbjct: 642 LYCKYGCLHQLEEFLLLMPFDP 663
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 231/500 (46%), Gaps = 49/500 (9%)
Query: 60 FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRS 119
FL R + AY G ++ +R +F + ++ WN++I +N +FR M R
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR- 155
Query: 120 HGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE 179
D V + + A + K G + DL + + S++ +Y +C
Sbjct: 156 ---DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
DA +VFDE+ + S+NV++ + +G + + FF+ ++ + T++
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMG----FNDEAVVMFFKMLELNVRPLN-HTVS 267
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFD 299
S++ + C ++ + G+ +H VK L + +D + +S+ DMY + +L +RRVFD
Sbjct: 268 SVM-LACSRSLALEVGKVIHAIAVK----LSVVADTVVSTSVFDMYVKCDRLESARRVFD 322
Query: 300 QMKS-------------------------------RNLYVWTAMINGYVQNGAPEDALIL 328
Q +S RN+ W AM+ GYV ++AL
Sbjct: 323 QTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDF 382
Query: 329 LREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYS 388
L M+ ++ + V+L+ +L C+ + + +GKQ H F + + + + NAL+DMY
Sbjct: 383 LTLMR-QEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYG 441
Query: 389 KCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVV 448
KCG+L A+ F +S RD ++W+++++ GR E+A+ ++ M Q+ KP T+
Sbjct: 442 KCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLA 500
Query: 449 SVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL 508
++L+ C+ ++ G I+ LI R K V I +VDM + D A+E K
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLI-RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA- 558
Query: 509 DPGPSVWGSLLTASVMHGNS 528
+W S++ +G S
Sbjct: 559 TRDLILWNSIIRGCCRNGRS 578
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 203/414 (49%), Gaps = 48/414 (11%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N + Y +CG DA ++F+EMP+R+ GS+N +I+ A G +++ FRRM
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG-----VSDEVFRMFRRMN 154
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
+G A + A +L CG R+LHC +VK G +V L +S++D+Y +
Sbjct: 155 RDGVRATETSFAGVLK-SCGLILDLRLLRQLHCAVVKYGY----SGNVDLETSIVDVYGK 209
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ + +RRVFD++ + + W ++ Y++ G ++A+++ +M ++ +RP ++ S
Sbjct: 210 CRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSS 268
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
V+ AC+ L VGK IHA + K+ + DT + ++ DMY KC L+ A RVFD +
Sbjct: 269 VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS-K 327
Query: 408 DAITWSSMISAYGLHGRGEEA-----------VVTYQKML-------------------- 436
D +W+S +S Y + G EA +V++ ML
Sbjct: 328 DLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIY-NSLITRYQMKPTVEICACVVDMLGRSGQ 495
Q D +T+V +L+ C SG+ D MG + I R+ V + ++DM G+ G
Sbjct: 388 QEIENIDNVTLVWILNVC--SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 496 LDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNY 549
L A + + M W +LLT G S + L++ +++E + PS Y
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRS-EQALSFFEGMQVEAK-PSKY 497
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 171/356 (48%), Gaps = 16/356 (4%)
Query: 275 VHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
+ L + I+ Y + + +R +F++M R+ W A+I QNG ++ + R M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMN- 154
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
+DG+R + S VL +C L+ L + +Q+H K +G+ L +++D+Y KC +
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
A RVFD + D ++W+ ++ Y G +EAVV + KML+L ++P TV SV+ AC
Sbjct: 215 DARRVFDEIVNPSD-VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLAC 273
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
S+S ++ G I+ + + TV + V DM + +L+ A S
Sbjct: 274 SRSLALEVGKVIHAIAVKLSVVADTV-VSTSVFDMYVKCDRLESARRVFDQTRSKDLKS- 331
Query: 515 WGSLLTASVMHGNSMTRDLAYRCLLELEPE-NPSNYISLSNTYASYKRWDVVTEVRTMMK 573
W S ++ M G +TR+ R L +L PE N ++ ++ Y WD + T+M+
Sbjct: 332 WTSAMSGYAMSG--LTREA--RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Query: 574 ERGLKKVPGIS--WI-TISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTDGCADM 626
+ ++ + ++ WI + +G +AH IY D I+ + DM
Sbjct: 388 QE-IENIDNVTLVWILNVCSGISDVQMGKQAH---GFIYRHGYDTNVIVANALLDM 439
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 204/400 (51%), Gaps = 31/400 (7%)
Query: 230 GYNADAFTIASLL----PVCCGKTGKWDYGRE---------------LHCYLVKNGLDLK 270
G+ D++T SL+ CC +GK +G+ +H Y LDL
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 271 MG-------SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
D+ +S+I R+ ++ + ++FD+M +N+ W MI+ Y+ P
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
++ L REM ++ G + N+ +L+ +L AC L G+ +HA + LN + AL
Sbjct: 233 VSISLFREM-VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTAL 291
Query: 384 IDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
IDMY KC + A R+FD++S R+ +TW+ MI A+ LHGR E + ++ M+ ++PD
Sbjct: 292 IDMYGKCKEVGLARRIFDSLS-IRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPD 350
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
+T V VL C+++GLV +G Y+ ++ +Q+KP C+ ++ +G ++A E +
Sbjct: 351 EVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEAL 410
Query: 504 KGMP---LDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYK 560
K +P + P + W +LL++S GN + + L+E +P N Y L N Y+
Sbjct: 411 KNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTG 470
Query: 561 RWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDK 600
RW+ V VR M+KER + ++PG + + H +G K
Sbjct: 471 RWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 196/441 (44%), Gaps = 53/441 (12%)
Query: 19 TAFITPHN-LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNM 77
+ FI P LL+ +L D + Q HA+++T+G + RL+ + + GD +
Sbjct: 13 SRFIVPGTGLLKGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSY 72
Query: 78 SRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISK 137
+ ++ SI +Y N + Y+ + AL + ++ R +PD YT ++
Sbjct: 73 TVSIYRSI--GKLYCANPVFKAYLVSSSPKQALGFYFDILRFG----FVPDSYTFVSLIS 126
Query: 138 VSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEF----------------- 180
+ + GK+ G++ NS+M MY+ CG
Sbjct: 127 CIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVS 186
Query: 181 -----------GD---AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
GD A K+FDEMP +N+ S+N+MIS + N G FR M
Sbjct: 187 WNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANN-----PGVSISLFREM 241
Query: 227 QCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYS 286
G+ + T+ LL CG++ + GR +H L++ L+ S V + ++LIDMY
Sbjct: 242 VRAGFQGNESTLVLLLNA-CGRSARLKEGRSVHASLIRTFLN----SSVVIDTALIDMYG 296
Query: 287 RSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
+ K++ L+RR+FD + RN W MI + +G PE L L M + +RP++V+ +
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFV 355
Query: 347 SVLPACALLGGLIVGKQIHAFST-KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV-- 403
VL CA G + G+ ++ + ++ + + ++YS G + A N+
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 404 -SYFRDAITWSSMISAYGLHG 423
++ W++++S+ G
Sbjct: 416 EDVTPESTKWANLLSSSRFTG 436
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 275/567 (48%), Gaps = 28/567 (4%)
Query: 30 LLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN 89
+L + D R Q H ++++ GF N F+ + LV YA ++++ +F + +N
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 90 VYLWNSLINGYVKNREFGHALVLFREM---GRSHGGDCVLPDDYTLATISKVSGELQD-L 145
+ + N L+ + + E ++ M G + G L + G D L
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG---------LTYCYMIRGCSHDRL 228
Query: 146 VY-GKLIPGKSXXXX-XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMIS 203
VY GK + AN ++ YS CG+ +M+ F+ +P+++V S+N ++S
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS 288
Query: 204 GWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLV 263
A G+ D F +MQ G S L C + G+++HCY++
Sbjct: 289 VCADYGSVL-----DSLDLFSKMQFWGKRPSIRPFMSFLNF-CSRNSDIQSGKQIHCYVL 342
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPE 323
K G D+ S +H+ S+LIDMY + + S ++ + NL +++ + G +
Sbjct: 343 KMGFDV---SSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITK 399
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALL--GGLIVGKQIHAFSTKVELNGDTSLFN 381
D +I + + + +G ++V+L +VL A +L L +H + K D ++
Sbjct: 400 D-IIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 382 ALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
+LID Y+K G + + +VFD + + +S+I+ Y +G G + V ++M ++ +
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDT-PNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLI 517
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
PD +T++SVLS CS SGLV+EG I++SL ++Y + P ++ AC+VD+LGR+G +++A
Sbjct: 518 PDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAER 577
Query: 502 FIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKR 561
+ D W SLL + +H N A L+ LEPEN + YI +S Y
Sbjct: 578 LLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGD 637
Query: 562 WDVVTEVRTMMKERGLKKVPGISWITI 588
+++ ++R + R L + G S + +
Sbjct: 638 FEISRQIREIAASRELMREIGYSSVVV 664
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 178/357 (49%), Gaps = 16/357 (4%)
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFT 237
G A + FDEM R+V ++N++ISG + G S +L+ M G A T
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYG--CSLRAIELY---AEMVSCGLRESAST 114
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRV 297
S+L VC + + G ++HC ++ G G ++ + S+L+ +Y+ + + ++ ++
Sbjct: 115 FPSVLSVCSDELFCRE-GIQVHCRVISLGF----GCNMFVRSALVGLYACLRLVDVALKL 169
Query: 298 FDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
FD+M RNL V ++ + Q G + + M++ +G+ N ++ ++ C+
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMEL-EGVAKNGLTYCYMIRGCSHDRL 228
Query: 358 LIVGKQIHAFSTKVELN-GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMI 416
+ GKQ+H+ K N + + N L+D YS CG L + R F+ V +D I+W+S++
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE-KDVISWNSIV 287
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
S +G +++ + KM G +P + +S L+ CS++ + G I+ ++
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDL 533
++ + + ++DM G+ ++ + + +P SL+T S+MH +T+D+
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPC-LNLECCNSLMT-SLMHCG-ITKDI 401
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 188/412 (45%), Gaps = 32/412 (7%)
Query: 57 QNP----FLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFG---HA 109
+NP + R + SG+L + F + ++V +N LI+G N +G A
Sbjct: 40 ENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISG---NSRYGCSLRA 96
Query: 110 LVLFREMGRSHGGDCVLPDDY-TLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN 168
+ L+ EM C L + T ++ V + G + + +
Sbjct: 97 IELYAEM-----VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRS 151
Query: 169 SVMAMYSRCGEFGD-AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
+++ +Y+ C D A+K+FDEM RN+ N+++ + G L+ + RM+
Sbjct: 152 ALVGLYA-CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGE-----SKRLFEVYLRME 205
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
EG + T ++ C ++ G++LH +VK+G ++ S++ + + L+D YS
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYE-GKQLHSLVVKSGWNI---SNIFVANVLVDYYSA 261
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
L S R F+ + +++ W ++++ G+ D+L L +MQ G RP+ +S
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW-GKRPSIRPFMS 320
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELN-GDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
L C+ + GKQIH + K+ + + +ALIDMY KC ++ ++ ++ ++
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCL 380
Query: 407 RDAITWSSMISAYGLH-GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
S M S +H G ++ + + M+ G D +T+ +VL A S S
Sbjct: 381 NLECCNSLMTSL--MHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS 430
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 22 ITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLV 81
+T +L+ L L++ H T H + +G+A + ++ L+ AY SG +SR V
Sbjct: 418 VTLSTVLKALSLSLPESLHSCTLV-HCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKV 476
Query: 82 FHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI 135
F ++ N++ S+INGY +N + + REM R + ++PD+ T+ ++
Sbjct: 477 FDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMN----LIPDEVTILSV 526
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 8/267 (2%)
Query: 261 YLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNG 320
+L +N DL V+ + ID +S L+ + FD+M R++ + +I+G + G
Sbjct: 37 FLEENPSDL-----VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYG 91
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
A+ L EM + G+R + + SVL C+ G Q+H + + +
Sbjct: 92 CSLRAIELYAEM-VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVR 150
Query: 381 NALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
+AL+ +Y+ +D A ++FD + R+ + ++ + G + Y +M G+
Sbjct: 151 SALVGLYACLRLVDVALKLFDEM-LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGV 209
Query: 441 KPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL 500
+ +T ++ CS LV EG +++ ++ + + +VD G L ++
Sbjct: 210 AKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSM 269
Query: 501 EFIKGMPLDPGPSVWGSLLTASVMHGN 527
+P + W S+++ +G+
Sbjct: 270 RSFNAVP-EKDVISWNSIVSVCADYGS 295
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 194/353 (54%), Gaps = 34/353 (9%)
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRN----------------------- 305
L S V++ ++L+ MY ++ + +VFD+M RN
Sbjct: 152 LGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 306 --------LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGG 357
+ WT +I+GY + P++A++L M D ++PN+++++++LPA LG
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 358 LIVGKQIHAFSTKVE-LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR-DAITWSSM 415
L + +HA+ K + D + N+LID Y+KCG + A + F + R + ++W++M
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG-MGIYNSLITRY 474
ISA+ +HG G+EAV ++ M +LG+KP+ +T++SVL+ACS GL +E + +N+++ Y
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 391
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLA 534
++ P V+ C+VDML R G+L++A + +P++ VW LL A ++ ++ +
Sbjct: 392 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
Query: 535 YRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
R L+ELE + +Y+ +SN + R+ R M RG+ K+PG S +T
Sbjct: 452 TRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQVT 504
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 198/436 (45%), Gaps = 59/436 (13%)
Query: 47 HAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREF 106
H Q L + N + +L S + TSG L L+ + ++L+N L+ Y
Sbjct: 38 HFQSLMQKYESNLKIIHQLHSHFTTSGFL----LLHQKQNSGKLFLFNPLLRCYSLGETP 93
Query: 107 GHALVLFREMGRSH---GGDCVLP--DDYTLATISKVSG--ELQDLVYGKLIPGKSXXXX 159
HA L+ ++ R H + LP D +T + K S L+ G + G +
Sbjct: 94 LHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLG 153
Query: 160 XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFAST----- 214
+++ MY G DA KVFDEMP+RN ++NVMI+G +LG+F
Sbjct: 154 FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLE 213
Query: 215 ----------------------SGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW 252
+ F R + C+ + TI ++LP W
Sbjct: 214 KMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAV------W 267
Query: 253 DYGR-----ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKS--RN 305
+ G +H Y+ K G + D+ + +SLID Y++ + + + F ++ + +N
Sbjct: 268 NLGDLKMCGSVHAYVGKRGF---VPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKN 324
Query: 306 LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH 365
L WT MI+ + +G ++A+ + ++M+ + G++PN+V++ISVL AC+ GGL + +
Sbjct: 325 LVSWTTMISAFAIHGMGKEAVSMFKDME-RLGLKPNRVTMISVLNACS-HGGLAEEEFLE 382
Query: 366 AFSTKV---ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLH 422
F+T V ++ D + L+DM + G L+ A ++ + A+ W ++ A ++
Sbjct: 383 FFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVY 442
Query: 423 GRGEEAVVTYQKMLQL 438
E A +K+++L
Sbjct: 443 DDAELAERVTRKLMEL 458
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 202/413 (48%), Gaps = 68/413 (16%)
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
FR M D ++ +L C G ++ GR++H +K+GL +DV + ++L+
Sbjct: 128 FREMLLGPVFPDKYSFTFVLKACAAFCG-FEEGRQIHGLFIKSGL----VTDVFVENTLV 182
Query: 283 DMYSRSKKLVLSRRV-------------------------------FDQMKSRNLYVWTA 311
++Y RS ++R+V FD+M+ RN+ W
Sbjct: 183 NVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNF 242
Query: 312 MINGYVQNGAPEDALILLREMQMKDGM-------------------------------RP 340
MI+GY G ++A + M ++D + +P
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ +L+SVL ACA LG L G+ +H + K + + L AL+DMYSKCG +D A VF
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
S RD TW+S+IS +HG G++A+ + +M+ G KP+ IT + VLSAC+ G++
Sbjct: 363 RATSK-RDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
D+ ++ + + Y+++PT+E C+VD+LGR G++++A E + +P D + SLL
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLG 481
Query: 521 ASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMK 573
A G + LLEL + S Y +SN YAS RW+ V + R M+
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 203/473 (42%), Gaps = 74/473 (15%)
Query: 33 LTVDHRAHRLT--QQCHAQILTNGFAQNPFLTTRLVSAYATSGD---LNMSRLVFHSIEA 87
L+ RA LT QQ HA +L G + F ++LV+ AT+ + ++ + + + I +
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 88 KNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVY 147
N + NS+I Y + AL +FREM V PD Y+ + K
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGP----VFPDKYSFTFVLKACAAFCGFEE 158
Query: 148 GKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP---------------- 191
G+ I G N+++ +Y R G F A KV D MP
Sbjct: 159 GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 192 ---------------QRNVGSFNVMISGWASLG--------------------NFASTSG 216
+RNV S+N MISG+A+ G N T+
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAY 278
Query: 217 GDLWCF------FRRMQCEGYN-ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDL 269
+ C+ F +M + D FT+ S+L C G G +H Y+ K+G+++
Sbjct: 279 AHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS-ACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 270 KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILL 329
+ L ++L+DMYS+ K+ + VF R++ W ++I+ +G +DAL +
Sbjct: 338 ----EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 330 REMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV-ELNGDTSLFNALIDMYS 388
EM + +G +PN ++ I VL AC +G L +++ + V + + ++D+
Sbjct: 394 SEM-VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 389 KCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
+ G ++ A + + + +I S++ A G+ E+A ++L+L ++
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYS---RSKKLVLSRRVFDQMKSRNLYVWTAM 312
++ H +++K GL D S L+ + K + + + +++ S N + ++
Sbjct: 56 QQAHAFMLKTGL----FHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 313 INGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE 372
I Y + PE AL + REM + + P+K S VL ACA G G+QIH K
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 373 LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
L D + N L+++Y + G + A +V D + RDA++W+S++SAY G +EA +
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMP-VRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
+M + ++ + ++S + +GLV E +++S+ R
Sbjct: 230 DEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVR 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYS---KCGSLDYASRVFDNVSYFRDAITWSSMISA 418
+Q HAF K L DT + L+ + + ++ YA + + + + T +S+I A
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS-PNGFTHNSVIRA 114
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
Y E A+ +++ML + PD + VL AC+ +EG I+ L + +
Sbjct: 115 YANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHG-LFIKSGLVT 173
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCL 538
V + +V++ GRSG + A + + MP+ S W SLL+A + G D A
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS-WNSLLSAYLEKG---LVDEARALF 229
Query: 539 LELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISW 585
E+E N ++ + + YA+ +V E + + ++ V +SW
Sbjct: 230 DEMEERNVESWNFMISGYAAA---GLVKEAKEVFDSMPVRDV--VSW 271
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 228/425 (53%), Gaps = 28/425 (6%)
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQC 228
+++ MYS+ G D+++VF+ + ++++ S+N ++SG+ G G + F M
Sbjct: 124 ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGK-----GKEALGVFAAMYR 178
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
E FT++S++ C G+++H +V G DL V LG+++I YS
Sbjct: 179 ERVEISEFTLSSVVKTC-ASLKILQQGKQVHAMVVVTGRDL-----VVLGTAMISFYSSV 232
Query: 289 KKLVLSRRVFDQMKSRNLYV-WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ + +V++ + V ++I+G ++N ++A +L+ RPN L S
Sbjct: 233 GLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ------RPNVRVLSS 286
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
L C+ L +GKQIH + + D+ L N L+DMY KCG + A +F + +
Sbjct: 287 SLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPS-K 345
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLG--IKPDMITVVSVLSACSKSGLVDEGMG 465
++W+SMI AY ++G G +A+ +++M + G + P+ +T + V+SAC+ +GLV EG
Sbjct: 346 SVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE 405
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPS----VWGSLLTA 521
+ + +Y++ P E C +D+L ++G+ ++ ++ M + S +W ++L+A
Sbjct: 406 CFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSA 465
Query: 522 SVMHGNSMTRD--LAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKK 579
++ + +TR +A R + E PEN S Y+ +SN YA+ +WDVV E+R +K +GL K
Sbjct: 466 CSLNMD-LTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVK 524
Query: 580 VPGIS 584
G S
Sbjct: 525 TAGHS 529
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 186/392 (47%), Gaps = 28/392 (7%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q HA ++ G T L+ Y+ G L S VF S+E K++ WN+L++G+++N
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ AL +F M R V ++TL+++ K L+ L GK +
Sbjct: 164 GKGKEALGVFAAMYRER----VEISEFTLSSVVKTCASLKILQQGKQVHAM-VVVTGRDL 218
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
++++ YS G +AMKV++ + NV + VM++ S G + + + +
Sbjct: 219 VVLGTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLNSLIS-GCIRNRNYKEAFLLM 274
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
R + + ++S L C + W G+++HC ++NG SD L + L+D
Sbjct: 275 SRQR-----PNVRVLSSSLAGCSDNSDLW-IGKQIHCVALRNGFV----SDSKLCNGLMD 324
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREM-QMKDGMRPNK 342
MY + ++V +R +F + S+++ WT+MI+ Y NG AL + REM + G+ PN
Sbjct: 325 MYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 343 VSLISVLPACALLGGLIVGKQIHA-FSTKVELNGDTSLFNALIDMYSKCGSLD----YAS 397
V+ + V+ ACA G + GK+ K L T + ID+ SK G +
Sbjct: 385 VTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVE 444
Query: 398 RVFDNVSYFRDAITWSSMISAYGLH---GRGE 426
R+ +N + W +++SA L+ RGE
Sbjct: 445 RMMENDNQSIPCAIWVAVLSACSLNMDLTRGE 476
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 92/240 (38%), Gaps = 34/240 (14%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H L NGF + L L+ Y G + +R +F +I +K+V W S+I+ Y N
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGK-----------LIP 152
+ AL +FREM G VLP+ T + + GK L+P
Sbjct: 361 GDGVKALEIFREMCEEGSG--VLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVP 418
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFA 212
G + + S+ GE + ++ + M + + S I W ++ +
Sbjct: 419 GTEHYV----------CFIDILSKAGETEEIWRLVERMMENDNQSIPCAI--WVAVLSAC 466
Query: 213 S-----TSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL 267
S T G + R E + +I L+ GKWD EL L GL
Sbjct: 467 SLNMDLTRGE----YVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGL 522
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 226/426 (53%), Gaps = 19/426 (4%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGW--ASLGNFASTSGGDLWCFFRR 225
N+++ Y GE+ ++ +F M +V N+ A+ +F+ + G L +
Sbjct: 55 NTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL---HGQ 111
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
G+ D F S + G+ G + R++ D + V +SL+D
Sbjct: 112 ALKRGFLWDPFVQTSFVRFY-GEVGDLESSRKM--------FDDILNPCVVACNSLLDAC 162
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDG--MRPNKV 343
R+ ++ + F +M ++ WT +ING+ + G AL++ EM + + PN+
Sbjct: 163 GRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEA 222
Query: 344 SLISVLPACALL--GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+ +SVL +CA GG+ +GKQIH + E+ T+L AL+DMY K G L+ A +FD
Sbjct: 223 TFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 402 NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
+ + W+++ISA +GR ++A+ ++ M + P+ IT++++L+AC++S LVD
Sbjct: 283 QIRD-KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVD 341
Query: 462 EGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA 521
G+ +++S+ + Y++ PT E CVVD++GR+G L A FI+ +P +P SV G+LL A
Sbjct: 342 LGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA 401
Query: 522 SVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
+H N+ + + L+ L+P++ Y++LS A W ++R M E G++K+P
Sbjct: 402 CKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIP 461
Query: 582 GISWIT 587
S +T
Sbjct: 462 AYSVLT 467
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 110/292 (37%), Gaps = 49/292 (16%)
Query: 9 LTTSRYHTSATAF-------ITPHNLL--ELLQLTVDHRAHRLTQQCHAQILTNGFAQNP 59
LTT Y TS F + P+NL L++ + H Q L GF +P
Sbjct: 62 LTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDP 121
Query: 60 FLTTRLVSAYATSGDLNMSRLVFHSI-------------------------------EAK 88
F+ T V Y GDL SR +F I
Sbjct: 122 FVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVT 181
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQD--LV 146
+V W ++ING+ K AL++F EM ++ + P++ T ++ +
Sbjct: 182 DVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA-VITPNEATFVSVLSSCANFDQGGIR 240
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWA 206
GK I G +++ MY + G+ A+ +FD++ + V ++N +IS A
Sbjct: 241 LGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALA 300
Query: 207 SLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGREL 258
S G F M+ + + T+ ++L C ++ D G +L
Sbjct: 301 SNGRPKQALE-----MFEMMKSSYVHPNGITLLAIL-TACARSKLVDLGIQL 346
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 255/565 (45%), Gaps = 60/565 (10%)
Query: 27 LLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
L+ LL+++ ++ L +Q H + +GF N L+ L+ Y TS L + VF +
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP 117
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
+V WNSL++GYV++ F + LF E+ RS V P++++ L
Sbjct: 118 DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSD----VFPNEFSFTAALAACARLHLSP 173
Query: 147 YGKLIPGK-SXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGW 205
G I K N ++ MY +CG DA+ VF M +++ S+N +++
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 206 ASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKN 265
+ G LW FF +M N D T
Sbjct: 234 SRNGKLEL----GLW-FFHQMP----NPDTVTY--------------------------- 257
Query: 266 GLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDA 325
+ LID + +S + +V M + N W ++ GYV + +A
Sbjct: 258 -------------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEA 304
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
+M G+R ++ SL VL A A L + G IHA + K+ L+ + +ALID
Sbjct: 305 TEFFTKMH-SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALID 363
Query: 386 MYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG-IKPDM 444
MYSKCG L +A +F + ++ I W+ MIS Y +G EA+ + ++ Q +KPD
Sbjct: 364 MYSKCGMLKHAELMFWTMPR-KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDR 422
Query: 445 ITVVSVLSACSKSGLVDEGM-GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
T +++L+ CS + E M G + +I Y++KP+VE C ++ +G+ G++ QA + I
Sbjct: 423 FTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVI 482
Query: 504 KGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSN--YISLSNTYASYKR 561
+ W +LL A + ++EL + YI +SN YA ++R
Sbjct: 483 QEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHER 542
Query: 562 WDVVTEVRTMMKERGLKKVPGISWI 586
W V ++R +M+E G+ K G SWI
Sbjct: 543 WREVGQIRKIMRESGVLKEVGSSWI 567
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 229 EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRS 288
+G DA + LL V G G R+LH Y+ K+G S+ L +SL+ Y S
Sbjct: 49 DGEKPDASPLVHLLRVS-GNYGYVSLCRQLHGYVTKHGF----VSNTRLSNSLMRFYKTS 103
Query: 289 KKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
L + +VFD+M ++ W ++++GYVQ+G ++ + L E+ D + PN+ S +
Sbjct: 104 DSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSD-VFPNEFSFTAA 162
Query: 349 LPACALLGGLIVGKQIHAFSTKVELN-GDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
L ACA L +G IH+ K+ L G+ + N LIDMY KCG +D A VF ++ +
Sbjct: 163 LAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE-K 221
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
D ++W++++++ +G+ E + + +M PD +T Y
Sbjct: 222 DTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT--------------------Y 257
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASV 523
N LI D +SG + A + + MP +P S W ++LT V
Sbjct: 258 NELI----------------DAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTGYV 296
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
+ DG +P+ L+ +L G + + +Q+H + TK +T L N+L+ Y SL
Sbjct: 47 INDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSL 106
Query: 394 DYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+ A +VFD + D I+W+S++S Y GR +E + + ++ + + P+ + + L+A
Sbjct: 107 EDAHKVFDEMPD-PDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLG---------------------- 491
C++ L G I++ L+ K V + C++DM G
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 492 ---------RSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELE 542
R+G+L+ L F MP +P + L+ A V G+ + A++ L ++
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQMP-NPDTVTYNELIDAFVKSGDF---NNAFQVLSDMP 281
Query: 543 PENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
N S++ ++ Y + ++ TE T M G++
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVR 317
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 238/486 (48%), Gaps = 18/486 (3%)
Query: 41 RLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGY 100
RL ++ HA L Q + L+S+ GDL +R VF S+ KN W ++I+GY
Sbjct: 99 RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 101 VKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXX 160
+K A LF + + HG ++ + + + G+ + G +
Sbjct: 159 LKYGLEDEAFALFEDYVK-HG--IRFTNERMFVCLLNLCSRRAEFELGRQVHG-NMVKVG 214
Query: 161 XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLW 220
+S++ Y++CGE A++ FD M +++V S+ +IS + G+ G
Sbjct: 215 VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG---- 270
Query: 221 CFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
F M + + FT+ S+L C + +GR++H +VK + +DV +G+S
Sbjct: 271 -MFIGMLNHWFLPNEFTVCSILKA-CSEEKALRFGRQVHSLVVKRMIK----TDVFVGTS 324
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
L+DMY++ ++ R+VFD M +RN WT++I + + G E+A+ L R M+ + +
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH-LIA 383
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
N ++++S+L AC +G L++GK++HA K + + + + L+ +Y KCG A V
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 401 DNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
+ RD ++W++MIS G EA+ ++M+Q G++P+ T S L AC+ S +
Sbjct: 444 QQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLT 520
G I+ S+ + V + + ++ M + G + +A MP + W +++
Sbjct: 503 LIGRSIH-SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIM 560
Query: 521 ASVMHG 526
+G
Sbjct: 561 GYARNG 566
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 215/443 (48%), Gaps = 21/443 (4%)
Query: 14 YHTSATAFITPHNLLELLQLTVDHRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSG 73
Y F + LL L L +Q H ++ G N + + LV YA G
Sbjct: 174 YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCG 232
Query: 74 DLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHG--GDCVLPDDYT 131
+L + F +E K+V W ++I+ + GH + + +G G LP+++T
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVISACSRK---GHGI---KAIGMFIGMLNHWFLPNEFT 286
Query: 132 LATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP 191
+ +I K E + L +G+ + S+M MY++CGE D KVFD M
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGK 251
RN ++ +I+ A G G + FR M+ A+ T+ S+L C G G
Sbjct: 347 NRNTVTWTSIIAAHAREG-----FGEEAISLFRIMKRRHLIANNLTVVSILRAC-GSVGA 400
Query: 252 WDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTA 311
G+ELH ++KN ++ +V++GS+L+ +Y + + + V Q+ SR++ WTA
Sbjct: 401 LLLGKELHAQIIKNSIE----KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV 371
MI+G G +AL L+EM +++G+ PN + S L ACA L++G+ IH+ + K
Sbjct: 457 MISGCSSLGHESEALDFLKEM-IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
+ + +ALI MY+KCG + A RVFD++ ++ ++W +MI Y +G EA+
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE-KNLVSWKAMIMGYARNGFCREALKL 574
Query: 432 YQKMLQLGIKPDMITVVSVLSAC 454
+M G + D ++LS C
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTC 597
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 15/385 (3%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N++++ R G+ A KVFD MP++N ++ MI G+ G + + F
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG-----LEDEAFALFEDYV 175
Query: 228 CEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR 287
G + L C + +++ GR++H +VK G+ ++ + SSL+ Y++
Sbjct: 176 KHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-----GNLIVESSLVYFYAQ 230
Query: 288 SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+L + R FD M+ +++ WTA+I+ + G A+ + M + PN+ ++ S
Sbjct: 231 CGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCS 289
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR 407
+L AC+ L G+Q+H+ K + D + +L+DMY+KCG + +VFD +S R
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN-R 348
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
+ +TW+S+I+A+ G GEEA+ ++ M + + + +TVVS+L AC G + G ++
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTA-SVMHG 526
+I + ++ V I + +V + + G+ A ++ +P S W ++++ S +
Sbjct: 409 AQII-KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-WTAMISGCSSLGH 466
Query: 527 NSMTRDLAYRCLLELEPENPSNYIS 551
S D + E NP Y S
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSS 491
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 189/373 (50%), Gaps = 43/373 (11%)
Query: 170 VMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
++++ S GE A VF+++ + ++N+MI + L F M
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLS----VNHKPREALLLFILMMISH 113
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSK 289
D FT ++ C + G ++H +K G +DV ++L+D+Y +
Sbjct: 114 QSQFDKFTFPFVIKACLASSSI-RLGTQVHGLAIKAGF----FNDVFFQNTLMDLYFKCG 168
Query: 290 KLVLSRRVFD-------------------------------QMKSRNLYVWTAMINGYVQ 318
K R+VFD QM RN+ WTAMI YV+
Sbjct: 169 KPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228
Query: 319 NGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTS 378
N P++A L R MQ+ D ++PN+ +++++L A LG L +G+ +H ++ K D
Sbjct: 229 NRRPDEAFQLFRRMQVDD-VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCF 287
Query: 379 LFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
L ALIDMYSKCGSL A +VFD V + TW+SMI++ G+HG GEEA+ +++M +
Sbjct: 288 LGTALIDMYSKCGSLQDARKVFD-VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEE 346
Query: 439 G-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
++PD IT V VLSAC+ +G V +G+ + +I Y + P E AC++ +L ++ +++
Sbjct: 347 ASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVE 406
Query: 498 QALEFIKGMPLDP 510
+A ++ M DP
Sbjct: 407 KASNLVESMDSDP 419
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 164/358 (45%), Gaps = 36/358 (10%)
Query: 44 QQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKN 103
+Q H +I+ + + L +L+S ++ G+ + LVF+ +++ + + WN +I N
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
+ AL+LF M SH D +T + K + G + G +
Sbjct: 97 HKPREALLLFILMMISHQSQF---DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTS-------- 215
N++M +Y +CG+ KVFD+MP R++ S+ M+ G S S
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 216 ------------------GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
+ + FRRMQ + + FTI +LL + G GR
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST-QLGSLSMGRW 272
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV 317
+H Y KNG L D LG++LIDMYS+ L +R+VFD M+ ++L W +MI
Sbjct: 273 VHDYAHKNGFVL----DCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLG 328
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG 375
+G E+AL L EM+ + + P+ ++ + VL ACA G + G + F+ +++ G
Sbjct: 329 VHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG--LRYFTRMIQVYG 384
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 50/308 (16%)
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMING 315
+++H ++K+ L +D L LI + S + + VF+Q++S + + W MI
Sbjct: 37 KQIHTKIIKHNLT----NDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRS 92
Query: 316 YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG 375
N P +AL+L M + + +K + V+ AC + +G Q+H + K
Sbjct: 93 LSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFN 152
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDN------VSY------------------------ 405
D N L+D+Y KCG D +VFD VS+
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
R+ ++W++MI+AY + R +EA +++M +KP+ T+V++L A ++ G + G
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 466 IYNSLITRYQMKPTVEI-C---ACVVDMLGRSGQLDQA---LEFIKGMPLDPGPSVWGSL 518
+++ Y K + C ++DM + G L A + ++G L + W S+
Sbjct: 273 VHD-----YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL----ATWNSM 323
Query: 519 LTASVMHG 526
+T+ +HG
Sbjct: 324 ITSLGVHG 331
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 203/444 (45%), Gaps = 76/444 (17%)
Query: 54 GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLF 113
GF ++P++ ++ Y + +R VF I + WN +I+GY K A LF
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 114 REMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAM 173
M P++ ++ ++G
Sbjct: 191 DMM----------PENDVVSWTVMITG--------------------------------- 207
Query: 174 YSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNA 233
+++ + +A K FD MP+++V S+N M+SG+A G F D F M G
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG-FTE----DALRLFNDMLRLGVRP 262
Query: 234 DAFTIASLLPVCCGKTGK---------WDYGR-ELHCYLVKNGLDL-------------- 269
+ T ++ C + D R L+C++ LD+
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 270 -KMGSDVHL--GSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
++G+ +L +++I Y+R + +R++FD M RN+ W ++I GY NG A+
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
+M +P++V++ISVL AC + L +G I + K ++ + S + +LI M
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 387 YSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
Y++ G+L A RVFD + RD ++++++ +A+ +G G E + KM GI+PD +T
Sbjct: 443 YARGGNLWEAKRVFDEMKE-RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 447 VVSVLSACSKSGLVDEGMGIYNSL 470
SVL+AC+++GL+ EG I+ S+
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKSI 525
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 220/518 (42%), Gaps = 97/518 (18%)
Query: 45 QCHAQ-ILTNGFAQNPFLTTRLVSAYAT-SGDLNMSRLVFHSIEAKNVYLWNSLINGYVK 102
Q HAQ I+ N + + +R++S +RL+F S+ NV++ NS+ + K
Sbjct: 24 QIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSK 83
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
L L+ + RS G ++PD ++ + K +G +G L
Sbjct: 84 MDMANDVLRLYEQ--RSRCG--IMPDAFSFPVVIKSAGR-----FGILFQALVEKLGFFK 134
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCF 222
N +M MY + A KVFD++ QR +NVMISG+
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY----------------- 177
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYG-RELHCYLVKNGLDLKMGSDVHLGSSL 281
W +G +E C L D+ +DV + +
Sbjct: 178 -----------------------------WKWGNKEEACKL----FDMMPENDVVSWTVM 204
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
I +++ K L +R+ FD+M +++ W AM++GY QNG EDAL L +M ++ G+RPN
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM-LRLGVRPN 263
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
+ + + V+ AC+ + + + + + + + AL+DM++KC + A R+F+
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 402 NVSYFRDAITWSSMIS-------------------------------AYGLHGRGEEAVV 430
+ R+ +TW++MIS Y +G+ A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 431 TYQKMLQLG-IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDM 489
++ M+ G KPD +T++SVLSAC ++ G I + I + Q+K ++ M
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD-YIRKNQIKLNDSGYRSLIFM 442
Query: 490 LGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
R G L +A M S + +L TA +G+
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVS-YNTLFTAFAANGD 479
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
+DA+ LL + G P++ + + +CA L L K++H + + GD L N
Sbjct: 222 KDAIELLDK-----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 383 LIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
+I M+ +C S+ A RVFD++ +D +W M+ AY +G G++A+ +++M + G+KP
Sbjct: 277 VISMFGECSSITDAKRVFDHM-VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 443 DMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF 502
+ T ++V AC+ G ++E ++S+ + + P E V+ +LG+ G L +A ++
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 503 IKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRW 562
I+ +P +P W ++ + +HG+ D +++++P + S+K
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKET 455
Query: 563 DVVTEVRTMMKERGL 577
++VT +++ R L
Sbjct: 456 NMVTSKSRILEFRNL 470
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 241 LLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQ 300
LL C ++ +++H + +++ K D L + +I M+ + ++RVFD
Sbjct: 241 LLFESCANLKSLEHSKKVHDHFLQS----KFRGDPKLNNMVISMFGECSSITDAKRVFDH 296
Query: 301 MKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
M +++ W M+ Y NG +DAL L EM K G++PN+ + ++V ACA +GG I
Sbjct: 297 MVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM-TKHGLKPNEETFLTVFLACATVGG-IE 354
Query: 361 GKQIHAFSTKVE--LNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISA 418
+H S K E ++ T + ++ + KCG L A + ++ + A W +M +
Sbjct: 355 EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNY 414
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
LH G+ + Y + L + + P + + + KS
Sbjct: 415 ARLH--GDIDLEDYMEELMVDVDPSKAVINKIPTPPPKS 451
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
L+ + C GL K +H + + D S + L++MYS CG + A+ VF+ +S
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
++ TW +I + +G GE+A+ + + + G PD + AC G VDEG+
Sbjct: 317 E-KNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL 375
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
+ S+ Y + P++E +V+M G LD+ALEF++ MP++P VW +L+ S +
Sbjct: 376 LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRV 435
Query: 525 HGNSMTRDLAYRCLLELEPENPSNYISLSNT-YASYKRWDVVTEVRTMMKERGLKKVPGI 583
HGN +L C +E +P+ S + K DV E LKK GI
Sbjct: 436 HGN---LELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKE--------SLKKRSGI 484
Query: 584 SWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
+ + F GD P + ++ +L +L M +
Sbjct: 485 -LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVE 521
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 242 LPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM 301
L CG+ + +H + + L + S+ H+ L++MYS + VF++M
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSN-HV---LLEMYSNCGLANEAASVFEKM 315
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
+NL W +I + +NG EDA+ + + ++G P+ + AC +LG + G
Sbjct: 316 SEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK-EEGNIPDGQLFRGIFYACGMLGDVDEG 374
Query: 362 -KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYG 420
+ S + + +L++MY+ G LD A + + + W ++++
Sbjct: 375 LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSR 434
Query: 421 LHGRGE 426
+HG E
Sbjct: 435 VHGNLE 440
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 10/223 (4%)
Query: 132 LATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP 191
L ++K+ GE + L K + GK + ++ MYS CG +A VF++M
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 192 QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGK 251
++N+ ++ ++I +A G G D F R + EG D + CG G
Sbjct: 317 EKNLETWCIIIRCFAKNG-----FGEDAIDMFSRFKEEGNIPDGQLFRGIF-YACGMLGD 370
Query: 252 WDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR-NLYVWT 310
D G LH D + + SL++MY+ L + ++M N+ VW
Sbjct: 371 VDEGL-LH--FESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWE 427
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
++N +G E ++ D R NK S +P A
Sbjct: 428 TLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKA 470
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 23/280 (8%)
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
L + C L K +H F T D S +N++I+MYS CGS++ A VF+++
Sbjct: 184 LFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP 243
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
R+ TW +I + +G+GE+A+ T+ + Q G KPD + AC G ++EG+
Sbjct: 244 E-RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL 302
Query: 465 GIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
+ S+ Y + P +E +V ML G LD+AL F++ M +P +W +L+ S +
Sbjct: 303 LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRV 360
Query: 525 HGNSMTRDLAYRCLLELEPENPSNYISLSNT-YASYKRWDVVTEVRTMMKERGLKKVP-- 581
HG+ + D RC +E + S S K D+V E K + + K P
Sbjct: 361 HGDLILGD---RCQDMVEQLDASRLNKESKAGLVPVKSSDLVKE-----KLQRMAKGPNY 412
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVAIMTD 621
GI ++ A GD + P + +Y L L M +
Sbjct: 413 GIRYM---------AAGDISRPENRELYMALKSLKEHMIE 443
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 229 EGYNADA---FTIASLLPVCCGKTGKWDYGRELHCYLVKN-GLDLKMGSDVHLGSSLIDM 284
EGY D F IA L CG + +H ++ + G+ SD+ +S+I+M
Sbjct: 175 EGYVVDLPRLFWIAQL----CGDAQALQEAKVVHEFITSSVGI-----SDISAYNSIIEM 225
Query: 285 YSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
YS + + VF+ M RNL W +I + +NG EDA+ + ++G +P+
Sbjct: 226 YSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK-QEGNKPDGEM 284
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL--FNALIDMYSKCGSLDYASRVFDN 402
+ AC +LG + G +H S E + + +L+ M ++ G LD A R ++
Sbjct: 285 FKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES 343
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK-PDMITVV--SVLSACSKSGL 459
+ D W ++++ +HG L LG + DM+ + S L+ SK+GL
Sbjct: 344 MEPNVD--LWETLMNLSRVHGD-----------LILGDRCQDMVEQLDASRLNKESKAGL 390
Query: 460 V 460
V
Sbjct: 391 V 391
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 169/363 (46%), Gaps = 24/363 (6%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQ----RNVGSFNVMISGWASLG-NFASTSGGDLWCF 222
+++++ Y R G +A+ VF+ M + N+ ++N +I G F + F
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK-----F 326
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLI 282
F MQ G D T SLL VC + G W+ R L + + ++ DV ++L+
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCS-RGGLWEAARNLFDEMT----NRRIEQDVFSYNTLL 381
Query: 283 DMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
D + ++ L+ + QM + N+ ++ +I+G+ + G ++AL L EM+ G+
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL-GI 440
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
++VS ++L +G I V + D +NAL+ Y K G D +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 399 VFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
VF + + +T+S++I Y G +EA+ +++ G++ D++ +++ A
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVW 515
K+GLV + + + + T+ + P V ++D GRS +D++ ++ G L S
Sbjct: 561 KNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619
Query: 516 GSL 518
+L
Sbjct: 620 SAL 622
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 191/443 (43%), Gaps = 58/443 (13%)
Query: 54 GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEA----KNVYLWNSLINGYVKN-REFGH 108
G+ + + L+SAY SG + VF+S++ N+ +N++I+ K EF
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 109 ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN 168
F EM R + V PD T ++ V + + + N
Sbjct: 323 VAKFFDEMQR----NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
+++ + G+ A ++ +MP + NV S++ +I G+A G F + F
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF-----DEALNLFG 433
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
M+ G D + +LL + K G+ + ++ + G+ DV ++L+
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYT-KVGRSEEALDILREMASVGIK----KDVVTYNALLGG 488
Query: 285 YSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
Y + K ++VF +MK NL ++ +I+GY + G ++A+ + RE + G+R
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK-SAGLRA 547
Query: 341 NKV---SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
+ V +LI L L+G + + TK ++ + +N++ID + + ++D ++
Sbjct: 548 DVVLYSALIDALCKNGLVGSAV---SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Query: 398 RVFDNVSYFRDAITWSSMISAYG-----LHGR------------GEEA-------VVTYQ 433
+ S + S++ G L G+ EE + ++
Sbjct: 605 DYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFR 664
Query: 434 KMLQLGIKPDMITVVSVLSACSK 456
KM QL IKP+++T ++L+ACS+
Sbjct: 665 KMHQLEIKPNVVTFSAILNACSR 687
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 136/293 (46%), Gaps = 52/293 (17%)
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKS----RNLYVWTAMINGYVQNGAPEDALILLREM 332
L S++I R K+ +++R+F+ + +Y ++A+I+ Y ++G E+A+ + M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 333 QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALIDMYSK 389
+ + G+RPN V+ +V+ AC GG+ KQ+ F +++ NG D FN+L+ + S+
Sbjct: 295 K-EYGLRPNLVTYNAVIDACGK-GGMEF-KQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 390 CGSLDYASRVFDNVSYFR--------------------------------------DAIT 411
G + A +FD ++ R + ++
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 412 WSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLI 471
+S++I + GR +EA+ + +M LGI D ++ ++LS +K G +E + I +
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 472 TRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVM 524
+ +K V ++ G+ G+ D+ + M + V +LLT S +
Sbjct: 472 S-VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE---HVLPNLLTYSTL 520
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 364 IHAFSTKVEL--NGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISA 418
+ F+ K E N L +A+I + G + A R+F+ Y +S++ISA
Sbjct: 218 FYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISA 277
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
YG G EEA+ + M + G++P+++T +V+ AC K G+ + + + + R ++P
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGMP---LDPGPSVWGSLLTASVMHGNSMTRDLAY 535
++ + R G + A M ++ + +LL A + G M DLA+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA-ICKGGQM--DLAF 394
Query: 536 RCLLELEPE----NPSNYISLSNTYASYKRWD 563
L ++ + N +Y ++ + +A R+D
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 19/274 (6%)
Query: 343 VSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+ L+ + C L + +H + D NA+I+MYS C S+D A +VF+
Sbjct: 120 IRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEE 179
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
+ + T M+ + +G GEEA+ + + + G KP+ V S C+ +G V E
Sbjct: 180 MPEWNSG-TLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKE 238
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTAS 522
G + ++ Y + P++E V ML SG LD+AL F++ MP++P VW +L+ S
Sbjct: 239 GSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLS 298
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNT-YASYKRWDVVTEVRTMMKERGLKKVP 581
+HG+ +L RC +E + + +S+ + K D V KE + P
Sbjct: 299 RVHGDV---ELGDRCAELVEKLDATRLDKVSSAGLVATKASDFVK------KEPSTRSEP 349
Query: 582 GISWITISGNTHSFAVGDKAHPSSSLIYDMLDDL 615
+F D +HP ++IY+ L L
Sbjct: 350 YF--------YSTFRPVDSSHPQMNIIYETLMSL 375
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 7/202 (3%)
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
++ +GY D + L +C GK + R +H ++ L DV +++I+MY
Sbjct: 110 LENKGYAMDLIRLLGLAKLC-GKPEALEAARVVHECIIA----LVSPCDVGARNAIIEMY 164
Query: 286 SRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
S + + +VF++M N M+ +V NG E+A+ L + ++G +PN
Sbjct: 165 SGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK-EEGNKPNGEIF 223
Query: 346 ISVLPACALLGGLIVGK-QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS 404
V C L G + G Q A + + ++++ M + G LD A + +
Sbjct: 224 NQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMP 283
Query: 405 YFRDAITWSSMISAYGLHGRGE 426
W ++++ +HG E
Sbjct: 284 MEPSVDVWETLMNLSRVHGDVE 305
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 12/256 (4%)
Query: 277 LGSSLIDMYSR----SKKLVLSRRV--FDQMKSRNLYVWTAMINGYVQNGAPEDALILLR 330
+ SSL D+ +R ++ V RRV + QM + + V + + +AL ++
Sbjct: 42 ITSSLQDVLTRPIWQNRSFVQCRRVSSYAQMVNNHQSVTIETFDALCKQVKIREALEVID 101
Query: 331 EMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKC 390
++ K G + L+ + C + L + +H T + D ++ +I+MYS C
Sbjct: 102 ILEDK-GYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYHTVIEMYSGC 156
Query: 391 GSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
S D A VF+ + R++ TW +MI +G GE A+ + + ++ G KPD +V
Sbjct: 157 RSTDDALNVFNEMPK-RNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAV 215
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDP 510
AC G ++EG+ + S+ Y M ++E V++ML G LD+AL+F++ M ++P
Sbjct: 216 FFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEP 275
Query: 511 GPSVWGSLLTASVMHG 526
+W +L+ + G
Sbjct: 276 SVEMWETLMNLCWVQG 291
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 32/369 (8%)
Query: 170 VMAMYSRCGEFGDAMKVF----DEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRR 225
++ +Y++ G+ A++V +E + N+ ++++MI+G+ L ++A+ + F
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA-----FAVFED 544
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
M EG D +++ CG G D VK L+ +I Y
Sbjct: 545 MVKEGMKPDVILYNNIISAFCG-MGNMDRA----IQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 286 SRSKKLVLSRRVFDQMKS----RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
++S + S VFD M+ ++ + +ING V+ E A+ +L EM + G+ N
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA-GVSAN 658
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALIDMYSKCGSLDYASR 398
+ + ++ A +G GK F T+++ G D + AL+ K G + A
Sbjct: 659 EHTYTKIMQGYASVGD--TGKAFEYF-TRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 399 VFDNVSYF---RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
V +S R++ ++ +I + G EA Q+M + G+KPD+ T S +SACS
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQAL---EFIKGMPLDPGP 512
K+G ++ + +KP ++ ++ R+ ++AL E +K M + P
Sbjct: 776 KAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 513 SVWGSLLTA 521
+V+ LLT+
Sbjct: 835 AVYHCLLTS 843
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 117/566 (20%), Positives = 213/566 (37%), Gaps = 101/566 (17%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNV----YLWNSLINGYVKNREFGHALVLFREMGRSH 120
+V Y GD++ +R F + A+ + ++ SLI+ Y R+ AL R+M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM---- 370
Query: 121 GGDCVLPDDYTLATISKVSG-ELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE 179
K G E+ + Y ++ G +S+ G
Sbjct: 371 ----------------KEEGIEMSLVTYSVIVGG--------------------FSKAGH 394
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIA 239
A FDE +R + N I G + + + R M+ EG +A IA
Sbjct: 395 AEAADYWFDE-AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA---PIA 450
Query: 240 SLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSR----SKKLVLSR 295
+ G T D + L + K + V LI++Y++ SK L +SR
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVF--KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 296 RVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALL 355
+ ++ NL ++ MING+V+ +A + +M +K+GM+P+ + +++ A +
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGM 567
Query: 356 GGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD---------NVSYF 406
G + Q K+ T F +I Y+K G + + VFD V F
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF 627
Query: 407 RDAI-----------------------------TWSSMISAYGLHGRGEEAVVTYQKMLQ 437
I T++ ++ Y G +A + ++
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 438 LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
G+ D+ T ++L AC KSG + + + + R + + + ++D R G +
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYNILIDGWARRGDVW 746
Query: 498 QALEFIKGMP---LDPGPSVWGSLLTASVMHG--NSMTRDLAYRCLLELEPENPSNYISL 552
+A + I+ M + P + S ++A G N T+ + L ++P N Y +L
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP-NIKTYTTL 805
Query: 553 SNTYASYKRWDVVTEVRTMMKERGLK 578
+A + MK G+K
Sbjct: 806 IKGWARASLPEKALSCYEEMKAMGIK 831
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 153/325 (47%), Gaps = 25/325 (7%)
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
A ++ G G+W+ +E + + +G V + ++++ +YSRS K ++ +
Sbjct: 191 ARMVAAILGVLGRWN--QESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELV 248
Query: 299 DQMKSR----NLYVWTAMINGYVQNGA--PEDALILLREMQMKDGMRPNKVSLISVLPAC 352
D M+ R +L + +IN +++G P A+ LL +M G+RP+ ++ ++L AC
Sbjct: 249 DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-DMVRNSGLRPDAITYNTLLSAC 307
Query: 353 A----LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---Y 405
+ L G + V + + A + +L +NA+I +Y +CG A R+F + +
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDL----WTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
F DA+T++S++ A+ E+ YQ+M ++G D +T +++ K G +D +
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM---PLDPGPSVWGSLLTAS 522
+Y + P ++D LG++ + +A + M + P + +L+
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 523 VMHGNSMTRDLAYRCLLE--LEPEN 545
G + + C+L +P+N
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDN 508
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 136/352 (38%), Gaps = 91/352 (25%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFF 223
N++M +YSR G+F A ++ D M QR ++ SFN +I+ G +L
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
R G DA T +LL C
Sbjct: 289 RN---SGLRPDAITYNTLLSAC-------------------------------------- 307
Query: 284 MYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
SR L + +VF+ M++ +L+ + AMI+ Y + G +A L E+++K G
Sbjct: 308 --SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK-GFF 364
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
P+ V+ S+L A A K+++ K+ D +N +I MY K G LD A ++
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 400 FDNVSYFR----DAITW-----------------------------------SSMISAYG 420
+ ++ DAIT+ S++I Y
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLIT 472
G+ EEA T+ ML+ G KPD + +L + + G+Y +I+
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 154/321 (47%), Gaps = 19/321 (5%)
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW-DYGRELHCYLVKNGLDLKMGSDVH 276
D F M +G + T SL+ C G+W D R L+ + ++ K+ +V
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCN-YGRWSDASR-----LLSDMIERKINPNVV 326
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREM 332
S+LID + + KLV + +++D+M R +++ ++++ING+ + ++A + M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 333 QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS 392
KD PN V+ +++ + G ++ ++ L G+T +N LI + G
Sbjct: 387 ISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 393 LDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS 449
D A ++F + D IT+S ++ +G+ E+A+V ++ + + ++PD+ T
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 450 VLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD 509
++ K+G V++G ++ SL + +KP V I ++ R G ++A + M D
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 510 ---PGPSVWGSLLTASVMHGN 527
P + +L+ A + G+
Sbjct: 565 GTLPNSGTYNTLIRARLRDGD 585
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 50/352 (14%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+S++ Y +A+ + D+M Q N +FN +I G F +
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL-----FLHNKASEAVALI 208
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
RM G D FT YG V NGL K G D+ L SL+
Sbjct: 209 DRMVARGCQPDLFT----------------YGT------VVNGL-CKRG-DIDLALSLLK 244
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+ K ++ ++T +I+ DAL L EM K G+RPN V
Sbjct: 245 KMEKGKI------------EADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVV 291
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ S++ G ++ + + ++N + F+ALID + K G L A +++D +
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 404 ---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
S D T+SS+I+ + +H R +EA ++ M+ P+++T +++ K+ V
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
+EGM ++ + R + TV ++ L ++G D A + K M D P
Sbjct: 412 EEGMELFREMSQRGLVGNTVTY-NTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 168/378 (44%), Gaps = 61/378 (16%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRN----VGSFNVMISGWASLGNFASTSGGDLWCFF 223
N +M + + G DA KVFDE+ +R+ V SFN +I+G+ +GN +
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG-----FRLK 298
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
+M+ D FT ++L+ C K K D L + K GL + +DV + ++LI
Sbjct: 299 HQMEKSRTRPDVFTYSALINALC-KENKMDGAHGLFDEMCKRGL---IPNDV-IFTTLIH 353
Query: 284 MYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
+SR+ ++ L + + +M S+ ++ ++ ++NG+ +NG A ++ M ++ G+R
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLR 412
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
P+K++ + LID + + G ++ A +
Sbjct: 413 PDKIT-----------------------------------YTTLIDGFCRGGDVETALEI 437
Query: 400 ---FDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK 456
D D + +S+++ GR +A ++ML+ GIKPD +T ++ A K
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL---DQALEFIKGMPLDPGPS 513
G G + + + + P+V +++ L + GQ+ D L+ + + + P
Sbjct: 498 KGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
Query: 514 VWGSLLTASVMHGNSMTR 531
+ +LL H NS R
Sbjct: 557 TYNTLLEGHHRHANSSKR 574
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/422 (18%), Positives = 167/422 (39%), Gaps = 71/422 (16%)
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
NVY++N L+N + K A +F E I+K S + + +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDE-------------------ITKRSLQPTVVSFN 279
Query: 149 KLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISG 204
LI G Y + G + ++ +M + +V +++ +I+
Sbjct: 280 TLING--------------------YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
G F M G + +L+ + G+ D +E + ++
Sbjct: 320 LCKENKMDGAHG-----LFDEMCKRGLIPNDVIFTTLIH-GHSRNGEIDLMKESYQKMLS 373
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNG 320
GL D+ L ++L++ + ++ LV +R + D M R L +T +I+G+ + G
Sbjct: 374 KGLQ----PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLF 380
E AL + +EM ++G+ ++V +++ G +I ++ + + D +
Sbjct: 430 DVETALEIRKEMD-QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 381 NALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQ 437
++D + K G ++ + + +T++ +++ G+ + A + ML
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 438 LGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLD 497
+G+ PD IT ++L EG + + RY KP + I A + +LD
Sbjct: 549 IGVVPDDITYNTLL----------EGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELD 598
Query: 498 QA 499
+A
Sbjct: 599 RA 600
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 160/337 (47%), Gaps = 22/337 (6%)
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGR 256
+FN+++S AS + G R +Q G AD +L+ C K+GK D
Sbjct: 469 TFNMLMSVCASSQDIEGARG-----VLRLVQESGMTADCKLYTTLIS-SCAKSGKVDAMF 522
Query: 257 ELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAM 312
E+ + +G++ +++H +LID +R+ ++ + + ++S+N+ V+ A+
Sbjct: 523 EVFHQMSNSGVE----ANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 313 INGYVQNGAPEDALILLREMQMK-DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKV 371
I+ Q+GA + A +L EM+ + + P+ +S+ +++ AC G + K+++ K
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 372 ELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEA 428
+ G ++ ++ SK G D+A ++ ++ D + +S++I G +EA
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 429 VVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVD 488
Q GI+ I+ S++ AC + + + +Y I +++PT+ ++
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK-IKSIKLRPTISTMNALIT 757
Query: 489 MLGRSGQLDQALEF---IKGMPLDPGPSVWGSLLTAS 522
L QL +A+E+ IK + L P + L+ AS
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLAS 794
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 14/271 (5%)
Query: 314 NGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL 373
N +++G +D + LL ++ +D + +K+ S AC + K+ F TK+ L
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAV---KEAFRF-TKLIL 463
Query: 374 NGDTSLFNALIDMYSKCGSLDYAS---RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVV 430
N S FN L+ + + ++ A R+ D ++++IS+ G+ +
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 431 TYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDML 490
+ +M G++ ++ T +++ C+++G V + G Y L ++ +KP + ++
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK-NVKPDRVVFNALISAC 582
Query: 491 GRSGQLDQALEFIKGM-----PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPE- 544
G+SG +D+A + + M P+DP G+L+ A G Y+ + +
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 545 NPSNYISLSNTYASYKRWDVVTEVRTMMKER 575
P Y N+ + WD + MKE+
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQ 227
N ++ M+ CG ++FD MP R+ S+ ++ G +G++ + F
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAA------FLFVSM 180
Query: 228 CEGYNADAFTIASLLPVC----CGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
+ AF I S + C C ++ G+++H K G + D +L SLI
Sbjct: 181 LKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE--EDSYLSGSLIR 238
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
Y + L + V Q+ + N W A + + G ++ + EM G++ N
Sbjct: 239 FYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMG-NHGIKKNVS 297
Query: 344 SLISVLPACALLG-GLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+VL AC+ + G G+Q+HA + K+ D + LI+MY K G + A +VF +
Sbjct: 298 VFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKS 357
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
W++M+++Y +G EA+ +M GIK
Sbjct: 358 SKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREM---QMKDG 337
L+ M+ +L ++R++FD+M R+ + W + G ++ G EDA L M K
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVEL--NGDTSLFNALIDMYSKCGSLDY 395
+ L VL ACA++ +GKQ+HA K+ D+ L +LI Y + L+
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 396 ASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
A+ V +S + + W++ ++ G +E + + +M GIK ++ +VL ACS
Sbjct: 249 ANLVLHQLSN-ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
Query: 456 -KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSV 514
S G ++ + I + + I +++M G+ G++ A + K + S
Sbjct: 308 WVSDGGRSGQQVHANAI-KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 515 WGSLLTASVMHG 526
W +++ + + +G
Sbjct: 367 WNAMVASYMQNG 378
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/511 (19%), Positives = 219/511 (42%), Gaps = 62/511 (12%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI----EAKNVYLWNSLINGYVKNR 104
Q+ T G + + + + ++ + L+++ V + ++ +SL+NGY ++
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 105 EFGHALVLFR---EMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXX 161
A+ L EMG PD +T T L++G + K+
Sbjct: 168 RISDAVALVDQMVEMGYK-------PDTFTFTT----------LIHGLFLHNKASEAVAL 210
Query: 162 XXXXXAN----------SVMAMYSRCGEFGDAMKVFDEMPQRNVGS----FNVMISGWAS 207
+V+ + G+ A+ + +M + + + +N +I G
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 208 LGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW-DYGRELHCYLVKNG 266
+ D F M +G D FT +SL+ C G+W D R L+ +
Sbjct: 271 YKHM-----DDALNLFTEMDNKGIRPDVFTYSSLISCLCN-YGRWSDASR-----LLSDM 319
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAP 322
++ K+ +V S+LID + + KLV + +++D+M R +++ ++++ING+ +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
++A + M KD PN V+ +++ + G ++ ++ L G+T +
Sbjct: 380 DEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 383 LIDMYSKCGSLDYASRVFD---NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
LI + + D A VF +V + +T++ ++ +G+ +A+V ++ + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
++PD+ T ++ K+G V++G ++ +L + + P V ++ R G ++A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 500 LEFIKGMPLD---PGPSVWGSLLTASVMHGN 527
+K M D P + +L+ A + G+
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 172/380 (45%), Gaps = 37/380 (9%)
Query: 182 DAMKVFDEM----PQRNVGSFNVMISGWASLGNFA-STSGGDLWCFFRRMQCEGYNADAF 236
DA+ +F +M P ++ FN ++S A + F S G+ +MQ G + D +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE------QMQTLGISHDLY 119
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG--SDVHLGSSLIDMYSRSKKLVLS 294
T + + C ++ +L L +K+G D+ SSL++ Y SK++ +
Sbjct: 120 TYSIFINCFCRRS-------QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 295 RRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
+ DQM + + +T +I+G + +A+ L+ +M ++ G +P+ V+ +V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVN 231
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF---DNVSYFR 407
G + + + K ++ D ++N +ID K +D A +F DN
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
D T+SS+IS +GR +A M++ I P+++T +++ A K G + E +Y
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQA---LEFIKGMPLDPGPSVWGSLLTA--- 521
+ +I R + P + + +++ +LD+A E + P + +L+
Sbjct: 352 DEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 522 --SVMHGNSMTRDLAYRCLL 539
V G + R+++ R L+
Sbjct: 411 AKRVEEGMELFREMSQRGLV 430
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 192/460 (41%), Gaps = 76/460 (16%)
Query: 58 NPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMG 117
N L + S S N+ + + S + NV+ +N LI G+ AL LF +M
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM- 231
Query: 118 RSHGGDCVLPDDYTLATISKVSGELQDLV-YGKLIPGKSXXXXXXXXXXXANSVMAMYSR 176
+ G L ++V Y LI G Y +
Sbjct: 232 -------------------ETKGCLPNVVTYNTLIDG--------------------YCK 252
Query: 177 CGEFGDAMKVFDEMP----QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYN 232
+ D K+ M + N+ S+NV+I+G G S M GY+
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS-----FVLTEMNRRGYS 307
Query: 233 ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLV 292
D T +L+ C K G + +H ++++GL V +SLI ++ +
Sbjct: 308 LDEVTYNTLIKGYC-KEGNFHQALVMHAEMLRHGL----TPSVITYTSLIHSMCKAGNMN 362
Query: 293 LSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
+ DQM+ R N +T +++G+ Q G +A +LREM +G P SV
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN-DNGFSP------SV 415
Query: 349 LPACALLGG-LIVGKQIHAFSTKVE-----LNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
+ AL+ G + GK A + + L+ D ++ ++ + + +D A RV
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 403 V---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
+ D IT+SS+I + R +EA Y++ML++G+ PD T ++++A G
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
+++ + ++N ++ + + P V + +++ L + + +A
Sbjct: 536 LEKALQLHNEMVEKGVL-PDVVTYSVLINGLNKQSRTREA 574
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 166/362 (45%), Gaps = 32/362 (8%)
Query: 183 AMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTI 238
A VF EM + NV ++N++I G+ GN F +M+ +G + T
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA-----LTLFDKMETKGCLPNVVTY 243
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
+L+ C K K D G +L + GL+ + S + +I+ R ++ V
Sbjct: 244 NTLIDGYC-KLRKIDDGFKLLRSMALKGLEPNLIS----YNVVINGLCREGRMKEVSFVL 298
Query: 299 DQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
+M R + + +I GY + G AL++ EM ++ G+ P+ ++ S++ +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM-LRHGLTPSVITYTSLIHSMCK 357
Query: 355 LGGLIVGKQIHAFSTKVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRD 408
G + + F ++ + G + + L+D +S+ G ++ A RV ++ +
Sbjct: 358 AGNM---NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 409 AITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYN 468
+T++++I+ + + G+ E+A+ + M + G+ PD+++ +VLS +S VDE + +
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 469 SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM---PLDPGPSVWGSLLTASVMH 525
++ + +KP + ++ + +A + + M L P + +L+ A M
Sbjct: 475 EMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 526 GN 527
G+
Sbjct: 534 GD 535
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 150/364 (41%), Gaps = 60/364 (16%)
Query: 264 KNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQN 319
K L+ ++ +V + LI + + + ++ +FD+M+++ N+ + +I+GY +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 320 GAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSL 379
+D LLR M +K G+ PN +S
Sbjct: 254 RKIDDGFKLLRSMALK-GLEPNLIS----------------------------------- 277
Query: 380 FNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKML 436
+N +I+ + G + S V ++ Y D +T++++I Y G +A+V + +ML
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 437 QLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQL 496
+ G+ P +IT S++ + K+G ++ M + + R + P +VD + G +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYM 396
Query: 497 DQALEFIKGMP---LDPGPSVWGSLLTASVMHGN-----SMTRDLAYRCLLELEPENPSN 548
++A ++ M P + +L+ + G ++ D+ + L P+ S
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK---GLSPDVVSY 453
Query: 549 YISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLI 608
LS SY D V+ M E+G+K IT S F + + L
Sbjct: 454 STVLSGFCRSYD-VDEALRVKREMVEKGIKP----DTITYSSLIQGFCEQRRTKEACDLY 508
Query: 609 YDML 612
+ML
Sbjct: 509 EEML 512
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 190/443 (42%), Gaps = 42/443 (9%)
Query: 93 WNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP 152
+N+LI GY K F ALV+ EM R HG + P T ++ + ++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLR-HG---LTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASL 208
+ +++ +S+ G +A +V EM +V ++N +I+G
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 209 GNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD 268
G D M+ +G + D + +++L C ++ D + +V+ G+
Sbjct: 429 GKME-----DAIAVLEDMKEKGLSPDVVSYSTVLSGFC-RSYDVDEALRVKREMVEKGIK 482
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPED 324
D SSLI + ++ + ++++M L + +TA+IN Y G E
Sbjct: 483 ----PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 325 ALILLREMQMKDGMRPNKVS---LISVL-------PACALLGGLIVGKQIHA---FSTKV 371
AL L EM ++ G+ P+ V+ LI+ L A LL L + + + + T +
Sbjct: 539 ALQLHNEM-VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 372 E--LNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGE 426
E N + +LI + G + A +VF+++ ++ D ++ MI + G
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 427 EAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACV 486
+A Y++M++ G +TV++++ A K G V+E + ++ ++ E +
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEA-EQAKVL 716
Query: 487 VDMLGRSGQLDQALEFIKGMPLD 509
V++ R G +D L+ + M D
Sbjct: 717 VEINHREGNMDVVLDVLAEMAKD 739
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 153/321 (47%), Gaps = 19/321 (5%)
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW-DYGRELHCYLVKNGLDLKMGSDVH 276
D F M +G D FT +SL+ C G+W D R L+ + L+ K+ +V
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCN-YGRWSDASR-----LLSDMLERKINPNVV 311
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREM 332
+SLID +++ KL+ + ++FD+M R N+ + ++ING+ + ++A + M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 333 QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS 392
KD + P+ V+ +++ ++ G ++ ++ L G+T + LI + +
Sbjct: 372 VSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 393 LDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS 449
D A VF + + +T+++++ +G+ E+A+V ++ + + ++PD+ T
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 450 VLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD 509
+ K+G V++G ++ SL + +KP V ++ + G ++A M D
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 510 ---PGPSVWGSLLTASVMHGN 527
P + +L+ A + G+
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGD 570
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 173/395 (43%), Gaps = 82/395 (20%)
Query: 85 IEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATI--------- 135
IEA +V +++++I+ K R AL LF EM + PD +T +++
Sbjct: 236 IEA-DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG----IRPDVFTYSSLISCLCNYGR 290
Query: 136 -SKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR- 193
S S L D++ K+ P NS++ +++ G+ +A K+FDEM QR
Sbjct: 291 WSDASRLLSDMLERKINPN----------VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 194 ---NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTG 250
N+ ++N +I+G +C R+ +A I +L+
Sbjct: 341 IDPNIVTYNSLING---------------FCMHDRLD------EAQQIFTLM-------- 371
Query: 251 KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NL 306
+ K+ L DV ++LI+ + ++KK+V +F M R N
Sbjct: 372 -----------VSKDCL-----PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 307 YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHA 366
+T +I+G+ Q ++A ++ ++M + DG+ PN ++ ++L G L +
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 367 FSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY---FRDAITWSSMISAYGLHG 423
+ K ++ D +N + + K G ++ +F ++S D I +++MIS + G
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Query: 424 RGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
EEA + KM + G PD T +++ A + G
Sbjct: 535 LKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
++ +++ +I+ + +DAL L EM K G+RP+ + S++ G ++
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGL 421
+ + ++N + FN+LID ++K G L A ++FD + S + +T++S+I+ + +
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
H R +EA + M+ PD++T ++++ K+ V +GM ++ + R
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 41/255 (16%)
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
S L+ ++ KK L ++M+ S NLY + MIN + AL +L +M M
Sbjct: 69 SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM-M 127
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
K G P+ V+L S LL G G +I S V AL+D + G
Sbjct: 128 KLGYGPSIVTLNS------LLNGFCHGNRI---SEAV----------ALVDQMVEMG--- 165
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
Y D +T+++++ H + EAV ++M+ G +PD++T +V++
Sbjct: 166 ----------YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP---LDPG 511
K G D + + N + + +++ V I + V+D L + +D AL M + P
Sbjct: 216 CKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 512 PSVWGSLLTASVMHG 526
+ SL++ +G
Sbjct: 275 VFTYSSLISCLCNYG 289
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 17/308 (5%)
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
++ +++ GK G+ + L ++G L DV+ +SLI ++ S + +
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL----DVYSYTSLISAFANSGRYREAVN 229
Query: 297 VFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
VF +M+ L + ++N + + G P + + L E DG+ P+ + +++ C
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 353 ALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDA 409
Q+ + D +NAL+D+Y K A +V + + +
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNS 469
+T++S+ISAY G +EA+ +M + G KPD+ T ++LS ++G V+ M I+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 470 LITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP---LDPGPSVWGSLLTASVMHG 526
+ KP + + M G G+ + ++ + L P W +LL +V
Sbjct: 410 M-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL--AVFGQ 466
Query: 527 NSMTRDLA 534
N M +++
Sbjct: 467 NGMDSEVS 474
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 184/412 (44%), Gaps = 36/412 (8%)
Query: 170 VMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFFRR 225
+++M + G A +F+ + + +V S+ +IS +A+ G + F++
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN-----VFKK 233
Query: 226 MQCEGYNADAFTIASLLPVCCGKTG-KWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
M+ +G T +L V GK G W+ L + +G+ D + ++LI
Sbjct: 234 MEEDGCKPTLITYNVILNVF-GKMGTPWNKITSLVEKMKSDGI----APDAYTYNTLITC 288
Query: 285 YSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
R + +VF++MK S + + A+++ Y ++ P++A+ +L EM + +G P
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL-NGFSP 347
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ V+ S++ A A G L ++ + D + L+ + + G ++ A +F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 401 D---NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+ N + T+++ I YG G+ E + + ++ G+ PD++T ++L+ ++
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD----PGPS 513
G+ E G++ + R P E ++ R G +QA+ + M LD P S
Sbjct: 468 GMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLS 525
Query: 514 VWGSLLTASVMHGNSMTRDLAYRCLLELE----PENPSNYISLSNTYASYKR 561
+ ++L A G + + + L E+E N Y SL + YA+ K
Sbjct: 526 TYNTVLAALARGG---MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/501 (19%), Positives = 203/501 (40%), Gaps = 50/501 (9%)
Query: 53 NGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE----AKNVYLWNSLINGYVKNREFGH 108
+GF+ + + T L+SA+A SG + VF +E + +N ++N + K +
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 109 ALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN 168
+ E +S G + PD YT T+ + + N
Sbjct: 262 KITSLVEKMKSDG---IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 169 SVMAMYSRCGEFGDAMKVFDEMP----QRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
+++ +Y + +AMKV +EM ++ ++N +IS +A G +
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML-----DEAMELKN 373
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
+M +G D FT +LL + GK + + + G ++ ++ I M
Sbjct: 374 QMAEKGTKPDVFTYTTLLS-GFERAGKVESAMSIFEEMRNAGCK----PNICTFNAFIKM 428
Query: 285 YSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRP 340
Y K ++FD++ S ++ W ++ + QNG + + +EM+ + G P
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK-RAGFVP 487
Query: 341 NKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVF 400
+ + +++ A + G ++ + D S +N ++ ++ G + + +V
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 401 DNVSYFR---DAITWSSMISAYG-------LHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
+ R + +T+ S++ AY +H EE Y + I+P + + ++
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE---VYSGV----IEPRAVLLKTL 600
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA---LEFIKGMP 507
+ CSK L+ E ++ L R P + +V + GR + +A L+++K
Sbjct: 601 VLVCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 508 LDPGPSVWGSLLTASVMHGNS 528
P + + SL+ MH S
Sbjct: 660 FTPSMATYNSLM---YMHSRS 677
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 194/481 (40%), Gaps = 63/481 (13%)
Query: 33 LTVDHRAHRLTQQCHA--QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK-- 88
L V ++HR + +++ NGF+ + L+SAYA G L+ + + + + K
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 89 --NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
+V+ + +L++G+ + + A+ +F EM R+ G P+ T K+ G
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAG---CKPNICTFNAFIKMYGNRGKFT 436
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEM------PQRNVGSFNV 200
I + N+++A++ + G + VF EM P+R +FN
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNT 494
Query: 201 MISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWD------- 253
+IS ++ G+F +RRM G D T ++L + G W+
Sbjct: 495 LISAYSRCGSFEQA-----MTVYRRMLDAGVTPDLSTYNTVL-AALARGGMWEQSEKVLA 548
Query: 254 -------------YGRELHCYL--VKNGLDLKMGSDVHLG---------SSLIDMYSRSK 289
Y LH Y + GL + +V+ G +L+ + S+
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 290 KLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
L + R F ++K R ++ +M++ Y + A +L M+ + G P+ +
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER-GFTPSMATY 667
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD---N 402
S++ + ++I + D +N +I Y + + ASR+F N
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 403 VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
D IT+++ I +Y EEA+ + M++ G +P+ T S++ K DE
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Query: 463 G 463
Sbjct: 788 A 788
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 188/488 (38%), Gaps = 114/488 (23%)
Query: 40 HRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE----AKNVYLWNS 95
H+ Q ++ GF+ + L+ Y S + V + + + ++ +NS
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 96 LINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKS 155
LI+ Y ++ A+ L +M PD +T T+
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKG----TKPDVFTYTTL-------------------- 390
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP----QRNVGSFNVMISGWASLGNF 211
++ + R G+ AM +F+EM + N+ +FN I + + G F
Sbjct: 391 ---------------LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 212 ASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKM 271
++ F + G + D T +LL V G+ G + + + G
Sbjct: 436 T-----EMMKIFDEINVCGLSPDIVTWNTLLAVF-GQNGMDSEVSGVFKEMKRAGF---- 485
Query: 272 GSDVHLGSSLIDMYSR----SKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALI 327
+ ++LI YSR + + + RR+ D + +L + ++ + G E +
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 328 LLREMQMKDGM-RPNKVSLISVLPACALLGGLIVGKQI---HAFSTKVE---LNGDTSLF 380
+L EM+ DG +PN+++ C+LL GK+I H+ + +V + L
Sbjct: 546 VLAEME--DGRCKPNELTY------CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 381 NALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYG--------------LHG 423
L+ + SKC L A R F + + D T +SM+S YG +
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 424 RG-EEAVVTY--------------------QKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
RG ++ TY +++L GIKPD+I+ +V+ A ++ + +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 463 GMGIYNSL 470
I++ +
Sbjct: 718 ASRIFSEM 725
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 376 DTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTY 432
D S+ +I M K G + A+ +F+ + + D +++S+ISA+ GR EAV +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSG------------LVDEGMG----IYNSLITRYQM 476
+KM + G KP +IT +L+ K G + +G+ YN+LIT
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT---- 287
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYR 536
C L + Q E +K + +LL ++G S A +
Sbjct: 288 -------CCKRGSLHQEAA--QVFEEMKAAGFSYDKVTYNALLD---VYGKSHRPKEAMK 335
Query: 537 CLLE--LEPENPS--NYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
L E L +PS Y SL + YA D E++ M E+G K
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 204/489 (41%), Gaps = 72/489 (14%)
Query: 38 RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLN-----MSRLVFHSIEAKNVYL 92
+ + L Q+ + G A + + + +++ + L+ M +++ E V +
Sbjct: 102 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTV-I 160
Query: 93 WNSLINGYVKNREFGHALVLFR---EMGRSHGGDCVLPDDYTLATISK---VSGELQDLV 146
+N+L+NG AL L EMG P TL T+ ++G++ D V
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHK-------PTLITLNTLVNGLCLNGKVSDAV 213
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMI 202
++ + V+ + + G+ AM++ +M +RN+ ++++I
Sbjct: 214 ---VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 203 SGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYL 262
G G+ + + F M+ +G+ AD T +L+ C G+WD G +L
Sbjct: 271 DGLCKDGSLDNA-----FNLFNEMEIKGFKADIITYNTLIGGFCN-AGRWDDGAKL---- 320
Query: 263 VKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAP 322
L DM R S N+ ++ +I+ +V+ G
Sbjct: 321 ------------------LRDMIKRKI-------------SPNVVTFSVLIDSFVKEGKL 349
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNA 382
+A LL+EM M+ G+ PN ++ S++ L Q+ + D FN
Sbjct: 350 READQLLKEM-MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 383 LIDMYSKCGSLDYASRVFDNVSY---FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
LI+ Y K +D +F +S + +T+++++ + G+ E A +Q+M+
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
++PD+++ +L +G +++ + I+ I + +M+ + I ++ + + ++D A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 500 LEFIKGMPL 508
+ +PL
Sbjct: 528 WDLFCSLPL 536
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 179/416 (43%), Gaps = 35/416 (8%)
Query: 182 DAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFT 237
DA+ +F +M P V FN + S A + + ++M+ +G +T
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL-----VLALCKQMESKGIAHSIYT 125
Query: 238 IASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID---MYSR-SKKLVL 293
++ ++ C + K Y ++K G + D + ++L++ + R S+ L L
Sbjct: 126 LSIMINCFC-RCRKLSYAFSTMGKIMKLGYE----PDTVIFNTLLNGLCLECRVSEALEL 180
Query: 294 SRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
R+ + L ++NG NG DA++L+ M ++ G +PN+V+ VL
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETGFQPNEVTYGPVLNVMC 239
Query: 354 LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAI 410
G + ++ + + D ++ +ID K GSLD A +F+ + + D I
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 411 TWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSL 470
T++++I + GR ++ + M++ I P+++T ++ + K G + E + +
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 471 ITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM---PLDPGPSVWGSLLTA-----S 522
+ R + P ++D + +L++A++ + M DP + L+
Sbjct: 360 MQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 523 VMHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
+ G + R+++ R ++ N Y +L + + +V ++ M R ++
Sbjct: 419 IDDGLELFREMSLRGVI----ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 186/473 (39%), Gaps = 79/473 (16%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYL----WNSLINGYVKNR 104
+++ GF N +++ SG ++ + +E +N+ L ++ +I+G K+
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV-YGKLIPGKSXXXXXXXX 163
+A LF EM ++ G D++ Y LI G
Sbjct: 278 SLDNAFNLFNEM--------------------EIKGFKADIITYNTLIGG---------- 307
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDL 219
+ G + D K+ +M +R NV +F+V+I + G
Sbjct: 308 ----------FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ--- 354
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
+ M G + T SL+ C K + + ++ ++ G D D+ +
Sbjct: 355 --LLKEMMQRGIAPNTITYNSLIDGFC-KENRLEEAIQMVDLMISKGCD----PDIMTFN 407
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMK 335
LI+ Y ++ ++ +F +M R N + ++ G+ Q+G E A L +EM +
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
+RP+ VS +L G L +I K ++ D ++ +I +D
Sbjct: 468 -RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 396 ASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLS 452
A +F ++ DA ++ MIS +A + ++KM + G PD +T ++
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 453 ACSKSGLVDEGMGIYNSLITRYQMKPT-----VEICACVVDMLGRSGQLDQAL 500
A L D+ LI +MK + V V++ML SG+LD++
Sbjct: 587 A----HLGDDDATTAAELIE--EMKSSGFPADVSTVKMVINMLS-SGELDKSF 632
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 152/347 (43%), Gaps = 40/347 (11%)
Query: 291 LVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
L R F RNL + +G V A +DA+ L R+M RP L +V+
Sbjct: 39 LFCCERGFSTFSDRNLSYRDKLSSGLVGIKA-DDAVDLFRDMIQS---RP----LPTVID 90
Query: 351 ACALLGGLIVGKQ---IHAFSTKVELNG---DTSLFNALIDMYSKCGSLDYASRVFDNV- 403
L + KQ + A ++E G + +I+ + +C L YA +
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 404 --SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVD 461
Y D + ++++++ L R EA+ +M+++G KP +IT+ ++++ +G V
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 462 EGMGIYNSLI-TRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM-----PLDPGPSVW 515
+ + + + ++ T +Q P V++++ +SGQ A+E ++ M LD +V
Sbjct: 211 DAVVLIDRMVETGFQ--PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD---AVK 265
Query: 516 GSLLTASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNT----YASYKRWDVVTE-VRT 570
S++ + S+ D A+ E+E + I NT + + RWD + +R
Sbjct: 266 YSIIIDGLCKDGSL--DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 571 MMKERGLKKVPGISWITISGNTHSFAVGDKAHPSSSLIYDMLDDLVA 617
M+K K P + +T S SF K + L+ +M+ +A
Sbjct: 324 MIKR---KISPNV--VTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 158/369 (42%), Gaps = 53/369 (14%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
+S++ Y +A+ + D+M Q N +FN +I G F +
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL-----FLHNKASEAMALI 209
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
RM +G D T YG +V NGL K G D L +L++
Sbjct: 210 DRMVAKGCQPDLVT----------------YG------VVVNGL-CKRG-DTDLAFNLLN 245
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKV 343
+ K + ++ +I+G + +DAL L +EM+ K G+RPN V
Sbjct: 246 KMEQGKL------------EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVV 292
Query: 344 SLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV 403
+ S++ G ++ + + ++N D F+ALID + K G L A +++D +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 404 ---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLV 460
S +T+SS+I+ + +H R +EA ++ M+ PD++T +++ K V
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 461 DEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD---PGPSVWGS 517
+EGM ++ + R + TV ++ L ++G D A E K M D P + +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTY-NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 518 LLTASVMHG 526
LL +G
Sbjct: 472 LLDGLCKNG 480
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 173/410 (42%), Gaps = 60/410 (14%)
Query: 182 DAMKVFDEM----PQRNVGSFNVMISGWASLGNF-ASTSGGDLWCFFRRMQCEGYNADAF 236
DA+ +F EM P ++ F+ ++S A + F S G+ +MQ G + +
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGE------QMQNLGIPHNHY 117
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLG--SSLIDMYSRSKKLVLS 294
T + L+ C ++ +L L G +K+G + ++ SSL++ Y SK++ +
Sbjct: 118 TYSILINCFCRRS-------QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 295 RRVFDQM----KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
+ DQM N + +I+G + +A+ L+ M K G +P+ V+ V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVN 229
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFR 407
G + + + +L ++N +ID K +D A +F +
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
+ +T+SS+IS +GR +A M++ I PD+ T +++ A K G + E +Y
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGN 527
+ ++ R + P++ + +++ +LD+A + + M
Sbjct: 350 DEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM--------------------- 387
Query: 528 SMTRDLAYRCLLELEPENPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
++ C ++ Y +L + YKR + EV M +RGL
Sbjct: 388 -----VSKHCFPDV-----VTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/522 (18%), Positives = 206/522 (39%), Gaps = 94/522 (18%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI----EAKNVYLWNSLINGYVKNR 104
Q+ G N + + L++ + L ++ V + N+ +SL+NGY ++
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
A+ L +M + P+ T T L++G + K+
Sbjct: 166 RISEAVALVDQMFVTG----YQPNTVTFNT----------LIHGLFLHNKASEAMALIDR 211
Query: 165 XXANS----------VMAMYSRCGEFGDAMKVFDEMPQRNVGS----FNVMISGWASLGN 210
A V+ + G+ A + ++M Q + +N +I G +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW-DYGRELHCYLVKNGLDL 269
D F+ M+ +G + T +SL+ C G+W D R L+ + ++
Sbjct: 272 M-----DDALNLFKEMETKGIRPNVVTYSSLISCLCN-YGRWSDASR-----LLSDMIER 320
Query: 270 KMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPEDA 325
K+ DV S+LID + + KLV + +++D+M R++ ++++ING+ + ++A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 326 LILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALID 385
+ M K P+ V+ +++ + G ++ ++ L G+T +N LI
Sbjct: 381 KQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 386 MYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVV------------ 430
+ G D A +F + + +T+++++ +G+ E+A+V
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 431 ---TYQKMLQ--------------------LGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
TY M++ G+KPD++ +++S + G +E
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA---- 555
Query: 468 NSLITRYQMKPTVEICACVVDMLG---RSGQLDQALEFIKGM 506
++L + T+ C ++ R G + + E IK M
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 214/508 (42%), Gaps = 56/508 (11%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI----EAKNVYLWNSLINGYVKNR 104
Q+ G + N + + L++ + L+++ V + ++ NSL+NG+
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 105 EFGHALVL---FREMGRSHGGDCVLPDDYTLATI------SKVSGELQDLVYGKLIPGKS 155
A+ L EMG PD +T T+ + E LV ++ G
Sbjct: 166 RISDAVSLVGQMVEMGYQ-------PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 156 XXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS----FNVMISGWASLGNF 211
V+ + G+ A+ + +M Q + +N +I + N
Sbjct: 219 PDLVTYGI------VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 212 ASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW-DYGRELHCYLVKNGLDLK 270
D F M +G + T SL+ C G+W D R L+ + ++ K
Sbjct: 273 -----NDALNLFTEMDNKGIRPNVVTYNSLIRCLCN-YGRWSDASR-----LLSDMIERK 321
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDAL 326
+ +V S+LID + + KLV + +++D+M R +++ ++++ING+ + ++A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
+ M KD PN V+ +++ + G ++ ++ L G+T + LI
Sbjct: 382 HMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 387 YSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
+ + D A VF + D +T+S ++ +G+ E A+V ++ + + ++PD
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
+ T ++ K+G V++G ++ SL + +KP V ++ R G ++A
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 504 KGM----PLDPGPSVWGSLLTASVMHGN 527
+ M PL P + +L+ A + G+
Sbjct: 560 REMKEEGPL-PDSGTYNTLIRAHLRDGD 586
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 41/255 (16%)
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
S L+ ++ K L + +QM+ S NLY ++ +IN + + AL +L +M M
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM-M 143
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
K G P+ V+L S LL G G +I + SL +++M
Sbjct: 144 KLGYEPDIVTLNS------LLNGFCHGNRI---------SDAVSLVGQMVEM-------- 180
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
Y D+ T++++I H R EAV +M+ G +PD++T V++
Sbjct: 181 ---------GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP---LDPG 511
K G +D + + + + +++P V I ++D L ++ AL M + P
Sbjct: 232 CKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 512 PSVWGSLLTASVMHG 526
+ SL+ +G
Sbjct: 291 VVTYNSLIRCLCNYG 305
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 20/301 (6%)
Query: 180 FGDAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADA 235
F DA +F EM P ++ F +++ A+L + + + F ++M+ G + D
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYET-----VIYFSQKMELYGISHDL 106
Query: 236 FTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD---LKMGSDVHLGSSLIDMYSRSKKLV 292
++ L+ C + + + + ++K G + + GS +H G L++ + LV
Sbjct: 107 YSFTILIHCFC-RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLH-GFCLVNRIGDAFSLV 164
Query: 293 LSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
+ + N+ V+ +I+G +NG AL LL EM+ K G+ + V+ ++L
Sbjct: 165 I--LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME-KKGLGADVVTYNTLLTGL 221
Query: 353 ALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDA 409
G ++ K +N D F ALID++ K G+LD A ++ + S +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNS 469
+T++S+I+ +HGR +A T+ M G P+++T +++S K +VDEGM ++
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 470 L 470
+
Sbjct: 342 M 342
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 28/316 (8%)
Query: 50 ILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK----NVYLWNSLINGYVKNRE 105
++ +G+ N + L+ +G+LN++ + + +E K +V +N+L+ G +
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 106 FGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXX 165
+ A + R+M + + PD T + V + +L + + +
Sbjct: 227 WSDAARMLRDMMKRS----INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 166 XANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWC 221
NS++ G DA K FD M + NV ++N +ISG+ F G
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK---FRMVDEG--MK 337
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
F+RM CEG+NAD FT +L+ C + GK ++ C++V ++ D+ L
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYC-QVGKLRVALDIFCWMVSR----RVTPDIITHCIL 392
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLYV----WTAMINGYVQNGAPEDALILLREMQMKDG 337
+ + ++ + FD M+ Y+ + MI+G + E A L + + +G
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV-EG 451
Query: 338 MRPN-KVSLISVLPAC 352
++P+ + I +L C
Sbjct: 452 VKPDARTYTIMILGLC 467
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 303 SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
S +LY +T +I+ + + AL +L +M MK G P+ V+ S+L L+ +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKM-MKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAY 419
+ K + ++N LID K G L+ A + + + D +T++++++
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 420 GLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLI 471
GR +A + M++ I PD++T +++ K G +DE +Y +I
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 185/461 (40%), Gaps = 73/461 (15%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAK-----NVYLWNSLINGYVKNREFGHALVLFREMGRS 119
L+ Y S + LVF + K V ++L++G VK R FG A+ LF +M S
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM-VS 220
Query: 120 HGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGE 179
G + PD Y + + EL+DL A ++A G
Sbjct: 221 VG---IRPDVYIYTGVIRSLCELKDL-------------------SRAKEMIAHMEATG- 257
Query: 180 FGDAMKVFDEMPQRNVGSFNVMISG-------WASLGNFASTSGGDLWCFFRRMQCEGYN 232
N+ +NV+I G W ++G +G DL
Sbjct: 258 -----------CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL------------K 294
Query: 233 ADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK-- 290
D T +L+ C K +++ G E+ + L L+ SSL++ + K
Sbjct: 295 PDVVTYCTLVYGLC-KVQEFEIGLEM----MDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 291 --LVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISV 348
L L +RV D S NL+V+ A+I+ + +A +L M K G+RPN V+ +
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG-KIGLRPNDVTYSIL 408
Query: 349 LPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD---NVSY 405
+ G L L +N+LI+ + K G + A N
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMG 465
+T++S++ Y G+ +A+ Y +M GI P + T ++LS ++GL+ + +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 466 IYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
++N + + +KP +++ G + +A EF+K M
Sbjct: 529 LFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/506 (19%), Positives = 200/506 (39%), Gaps = 109/506 (21%)
Query: 48 AQILTNGFAQNPFLTTRLVSAYATSGDLN-----MSRLVFHSIEAKNVYLWNSLINGYVK 102
+++ G + + L++ + GD++ M+ ++ +E V + SL+ GY
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP-TVVTYTSLMGGYCS 484
Query: 103 NREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+ AL L+ EM G + P YT T+ +SG
Sbjct: 485 KGKINKALRLYHEMT----GKGIAPSIYTFTTL--LSGLF-------------------- 518
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGNFASTSGGD 218
R G DA+K+F+EM + NV ++NVMI G+ G+ +
Sbjct: 519 -------------RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA---- 561
Query: 219 LWCFFRRMQCEGYNADAFTIASLLPVCC-------------------------------- 246
+ F + M +G D ++ L+ C
Sbjct: 562 -FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 247 --GKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
+ GK + + +V+ G+DL D+ LID + K L + +M R
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDL----DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 305 NL----YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
L ++T+MI+ + G ++A + ++ + +G PN+V+ +V+ G +
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR----DAITWSSMI 416
+ + + V + + +D+ +K G +D V + + + + T++ +I
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
+ GR EEA +M+ G+ PD IT ++++ + V + + ++NS+ T +
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM-TEKGI 853
Query: 477 KP------TVEICACVVDMLGRSGQL 496
+P T+ CV +G++ +L
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATEL 879
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 200/463 (43%), Gaps = 49/463 (10%)
Query: 69 YATSGDLNMSRLVFHSIE----AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDC 124
Y +S ++ +R VF + + NV +N L+NGY + AL + M
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK--- 235
Query: 125 VLPDDYTLATISKV---SGELQDL-------VYGKLIPGKSXXXXXXXXXXXANSVMAMY 174
V PD+ T TI K G L DL L+P + N+++ Y
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNR----------VTYNNLVYGY 285
Query: 175 SRCGEFGDAMKVFDEMPQRNV----GSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEG 230
+ G +A ++ + M Q NV ++N++I+G + G+ G +L + ++ +
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMR--EGLELMDAMKSLKLQ- 342
Query: 231 YNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKK 290
D T +L+ C + G R+L + +G+ + V SL + K+
Sbjct: 343 --PDVVTYNTLID-GCFELGLSLEARKLMEQMENDGVK---ANQVTHNISLKWLCKEEKR 396
Query: 291 LVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLI 346
++R+V + + S ++ + +I Y++ G AL ++REM K G++ N ++L
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK-GIKMNTITLN 455
Query: 347 SVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF 406
++L A L + + K D + LI + + ++ A ++D +
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 407 R---DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ T++S+I HG+ E A+ + ++ + G+ PD T S++ K G V++
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 464 MGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
YN I ++ KP C +++ L + G ++AL F +
Sbjct: 576 FEFYNESI-KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 161/374 (43%), Gaps = 28/374 (7%)
Query: 171 MAMYSRCGEFGDAMKVFDEMPQ----RNVGSFNVMISGWASLGNFASTSGGDLWCFFRRM 226
+ Y A +VFD+M + NV +FNV+++G+ G G RM
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG-----MLERM 230
Query: 227 QCE-GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
E N D T ++L K G+ +EL + KNGL + + V ++L+ Y
Sbjct: 231 VSEFKVNPDNVTYNTILKAM-SKKGRLSDLKELLLDMKKNGL---VPNRVTY-NNLVYGY 285
Query: 286 SRSKKLVLSRRVFDQMKSRN----LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+ L + ++ + MK N L + +ING G+ + L L+ M+ ++P+
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK-SLKLQPD 344
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR--- 398
V+ +++ C LG + +++ + + N + K + +R
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 399 -VFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+ D + D +T+ ++I AY G A+ ++M Q GIK + IT+ ++L A K
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF---IKGMPLDPGPSV 514
+DE + NS R + V ++ R ++++ALE +K + + P S
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF-REEKVEKALEMWDEMKKVKITPTVST 523
Query: 515 WGSLLTASVMHGNS 528
+ SL+ HG +
Sbjct: 524 FNSLIGGLCHHGKT 537
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 17/275 (6%)
Query: 194 NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWD 253
++ +++ +I + +G+ + G L R M +G + T+ ++L C K K D
Sbjct: 415 DIVTYHTLIKAYLKVGDLS----GALE-MMREMGQKGIKMNTITLNTILDALC-KERKLD 468
Query: 254 YGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVW 309
L K G + +V G+ LI + R +K+ + ++D+MK + + +
Sbjct: 469 EAHNLLNSAHKRGF---IVDEVTYGT-LIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 310 TAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFST 369
++I G +G E A+ E+ + G+ P+ + S++ G + + + S
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 370 KVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR--DAITWSSMISAYGLHGRGEE 427
K D N L++ K G + A F+ + R D +T+++MISA+ + +E
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKE 643
Query: 428 AVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
A +M + G++PD T S +S + G + E
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 190/442 (42%), Gaps = 64/442 (14%)
Query: 186 VFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVC 245
V D P NV +F +I+G+ G + F+ M+ G D ++L+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRA-----FDLFKVMEQRGIEPDLIAYSTLID-G 330
Query: 246 CGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKL----VLSRRVFDQM 301
K G G +L + G+ L DV + SS ID+Y +S L V+ +R+ Q
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKL----DVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 302 KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVG 361
S N+ +T +I G Q+G +A + ++ +K GM P+ V+ S++ G L G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-LKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISA 418
++ K+ D ++ L+D SK G + +A R + S + + ++S+I
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG---------MGI--- 466
+ R +EA+ ++ M GIKPD+ T +V+ G ++E MG+
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 467 ---YNSLITRY--QMKPT-----------------VEICACVVDMLGRSGQLDQALEFIK 504
Y +LI + MKPT + +C V+ +L + +++ A +F
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 505 GM---PLDPGPSVWGSLLTASVMHGNSMTR-DLAYRC--LLELEPENPSNYISLSNTYAS 558
+ ++P + +++ S+ R D A R LL++ P P+ +
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYC----SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 559 YKRWDVVTEVR--TMMKERGLK 578
K D+ +R ++M E+G K
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSK 703
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 137/324 (42%), Gaps = 19/324 (5%)
Query: 183 AMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLL 242
++K+ + + NV FN +I GW L F FR M G D T +++
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK-----VFRLMGIYGIKPDVATFTTVM 538
Query: 243 PVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK 302
V + G+ + L + K GL+ D +LID + + K + ++FD M+
Sbjct: 539 RVSIME-GRLEEALFLFFRMFKMGLE----PDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 303 ----SRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGL 358
S ++ V +I+ + EDA + ++ M P+ V+ +++ L L
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 359 IVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYF---RDAITWSSM 415
++I +T LI + K +D A R+F ++ +A+T+ +
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 416 ISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQ 475
+ + E + +++M + GI P +++ ++ K G VDE I++ I +
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-K 771
Query: 476 MKPTVEICACVVDMLGRSGQLDQA 499
+ P V A ++ + G+L +A
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEA 795
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 213/499 (42%), Gaps = 59/499 (11%)
Query: 39 AHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSR-LVFHSIE---AKNVYLWN 94
A R+ ++ Q G A + F L+ + + ++ +R + +E N + +
Sbjct: 471 AMRVLKEMKEQ----GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 95 SLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVY-GKLIPG 153
+ I+GY++ EF A +EM R G VLP+ +G + + GK+I
Sbjct: 527 AFISGYIEASEFASADKYVKEM-RECG---VLPNKVL------CTGLINEYCKKGKVIEA 576
Query: 154 KSXXXXXXXXXXXANS-----VMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISG 204
S ++ +M + + DA ++F EM + +V S+ V+I+G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 205 WASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVK 264
++ LGN S F M EG + LL C ++G+ + +EL +
Sbjct: 637 FSKLGNMQKASS-----IFDEMVEEGLTPNVIIYNMLLGGFC-RSGEIEKAKELLDEMSV 690
Query: 265 NGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNG 320
GL + ++ID Y +S L + R+FD+MK + L +V+T +++G +
Sbjct: 691 KGLH----PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 321 APEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI------HAFSTKVELN 374
E A+ + K G + +++ G + ++ +F + N
Sbjct: 747 DVERAITIFG--TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVF---DNVSYFRDAITWSSMISAYGLHGRGEEAVVT 431
T +N +ID K G+L+ A +F N + IT++S+++ Y GR E
Sbjct: 805 DVT--YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 432 YQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM----KPTVEICACVV 487
+ + + GI+PD I +++A K G+ + + + + + + + K ++ C ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 488 DMLGRSGQLDQALEFIKGM 506
+ G+++ A + ++ M
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 181/440 (41%), Gaps = 38/440 (8%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVY----LWNSLINGYVKNR 104
+++++G P++ + + G + ++ +F + A + + SLI GY + +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 105 EFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXX 164
L EM + + ++ YT T+ K DL I +
Sbjct: 397 NVRQGYELLVEMKKRN----IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 165 XXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS----FNVMISGWASLGNFASTSGGDLW 220
+++ + + FGDAM+V EM ++ + +N +I G +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS---- 508
Query: 221 CFFRRMQCEGYNADAFTIASLLP--VCCGKTGKWD-YGREL-HCYLVKNGLDLKMGSDVH 276
F M G +AFT + + + + D Y +E+ C ++ N +
Sbjct: 509 -FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV--------- 558
Query: 277 LGSSLIDMYSRSKKLVLS----RRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREM 332
L + LI+ Y + K++ + R + DQ + +T ++NG +N +DA + REM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 333 QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS 392
+ K G+ P+ S ++ + LG + I + L + ++N L+ + + G
Sbjct: 619 RGK-GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 393 LDYASRVFDNVSY---FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS 449
++ A + D +S +A+T+ ++I Y G EA + +M G+ PD +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 450 VLSACSKSGLVDEGMGIYNS 469
++ C + V+ + I+ +
Sbjct: 738 LVDGCCRLNDVERAITIFGT 757
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 171/435 (39%), Gaps = 64/435 (14%)
Query: 54 GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVY----LWNSLINGYVKNREFGHA 109
G N L T L++ Y G + + + S+ + + + L+NG KN + A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 110 LVLFREMGRSHGGDCVLPDDYT----------LATISKVSGELQDLVYGKLIPGKSXXXX 159
+FREM R G + PD ++ L + K S ++V L P
Sbjct: 612 EEIFREM-RGKG---IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN------ 661
Query: 160 XXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTS 215
N ++ + R GE A ++ DEM + N ++ +I G+ G+ A
Sbjct: 662 ----VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA- 716
Query: 216 GGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLK-MGSD 274
+ F M+ +G D+F +L+ CC D R + + G + K S
Sbjct: 717 ----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLN---DVERAITIF----GTNKKGCASS 765
Query: 275 VHLGSSLIDMYSRSKKLVLSRRV--------FDQMKSRNLYVWTAMINGYVQNGAPEDAL 326
++LI+ + K L V FD+ N + MI+ + G E A
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
L +MQ + M P ++ S+L +G + + + D +++ +I+
Sbjct: 826 ELFHQMQNANLM-PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Query: 387 YSKCGSLDYASRVFDNVSYFRDAI---------TWSSMISAYGLHGRGEEAVVTYQKMLQ 437
+ K G A + D + + ++A+ T +++S + G E A + M++
Sbjct: 885 FLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943
Query: 438 LGIKPDMITVVSVLS 452
L PD TV+ +++
Sbjct: 944 LQYIPDSATVIELIN 958
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 191/444 (43%), Gaps = 33/444 (7%)
Query: 80 LVFHSIEAKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVS 139
LV A NV + +LING+ K E A LF+ M + + PD +T+
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG----IEPDLIAYSTLIDGY 331
Query: 140 GELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NV 195
+ L G + ++ +S + +Y + G+ A V+ M + NV
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 196 GSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYG 255
++ ++I G G G + ++ G T +SL+ C K G G
Sbjct: 392 VTYTILIKGLCQDGRIYEAFG-----MYGQILKRGMEPSIVTYSSLIDGFC-KCGNLRSG 445
Query: 256 RELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLV----LSRRVFDQMKSRNLYVWTA 311
L+ ++K G DV + L+D S+ ++ S ++ Q N+ V+ +
Sbjct: 446 FALYEDMIKMGYP----PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 312 MINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGL------IVGKQIH 365
+I+G+ + ++AL + R M + G++P+ + +V+ + +G Q+
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIY-GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF 560
Query: 366 AFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR---DAITWSSMISAYGLH 422
+ +++ D ++ N +I + KC ++ AS+ F+N+ + D +T+++MI Y
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 423 GRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEI 482
R +EA ++ + P+ +T+ ++ K+ +D + ++ S++ KP
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVT 679
Query: 483 CACVVDMLGRSGQLDQALEFIKGM 506
C++D +S ++ + + + M
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 174/458 (37%), Gaps = 79/458 (17%)
Query: 176 RCGEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADA 235
R G F A KVFDEM FNV LG+ S +AD
Sbjct: 111 RNGMFDVADKVFDEMITNRGKDFNV-------LGSIRDRS---------------LDAD- 147
Query: 236 FTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSR 295
+ L CC + G D E+ Y + G+ + S + +SLI S ++ L
Sbjct: 148 --VCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG----SDRVDLIA 201
Query: 296 RVFDQMKSRNLYVWTAMINGYVQN-----GAPEDALILLREMQMKDGMRPNKVSLISVL- 349
FD++ + +G+V + G AL R + M+ G R VS VL
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR-LVMERGFRVGIVSCNKVLK 260
Query: 350 ---------------------PA------CALLGGLIV-GKQIHAFS-----TKVELNGD 376
PA C L+ G G+ AF + + D
Sbjct: 261 GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 377 TSLFNALIDMYSKCGSLDYASRVFDNVSYF---RDAITWSSMISAYGLHGRGEEAVVTYQ 433
++ LID Y K G L ++F + D + +SS I Y G A V Y+
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 434 KMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRS 493
+ML GI P+++T ++ + G + E G+Y ++ R M+P++ + ++D +
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKC 439
Query: 494 GQLDQAL---EFIKGMPLDPGPSVWGSLLTASVMHGNSM-TRDLAYRCLLELEPENPSNY 549
G L E + M P ++G L+ G + + + L + N +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWIT 587
SL + + R+D +V +M G+K P ++ T
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIK--PDVATFT 535
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 89 NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYG 148
NV ++NSLI+G+ + F AL +FR MG +G + PD T T+ +VS ++D
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMG-IYG---IKPDVATFTTVMRVS-IMEDAFCK 549
Query: 149 KLIP--GKSXXXXXXXXXXXA-----NSVMAMYSRCGEFGDAMKVFDEMP----QRNVGS 197
+ P G A N V+ + +C DA K F+ + + ++ +
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 198 FNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRE 257
+N MI G+ SL F ++ + + T+ L+ V C K D
Sbjct: 610 YNTMICGYCSLRRLDEAER-----IFELLKVTPFGPNTVTLTILIHVLC-KNNDMDGAIR 663
Query: 258 LHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMI 313
+ + + G + V G L+D +S+S + S ++F++M+ + ++ ++ +I
Sbjct: 664 MFSIMAEKG---SKPNAVTYG-CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 314 NGYVQNGAPEDA 325
+G + G ++A
Sbjct: 720 DGLCKRGRVDEA 731
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 159/335 (47%), Gaps = 21/335 (6%)
Query: 182 DAMKVFDEMPQR-NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIAS 240
D + +EM R +V +N +I G +G D F RM+ +G ADA T S
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV-----NDAVELFDRMERDGVRADAVTYNS 214
Query: 241 LLP-VCCGKTGKW-DYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
L+ +CC +G+W D R L+++ + + +V +++ID++ + K + +++
Sbjct: 215 LVAGLCC--SGRWSDAAR-----LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 299 DQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
++M R +++ + ++ING +G ++A +L M K G P+ V+ +++
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCK 326
Query: 355 LGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSS 414
+ G ++ + L GDT +N +I Y + G D A +F + + T+S
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI 386
Query: 415 MISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRY 474
++ ++ R E+A+V ++ M + I+ D+ T V+ K G V++ ++ SL +
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK- 445
Query: 475 QMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD 509
+KP V ++ R Q D++ + M D
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 130/286 (45%), Gaps = 25/286 (8%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFF 223
NS++A G + DA ++ +M R NV +F +I + G F+ +
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK-----LY 267
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M + D FT SL+ C G+ D +++ +V G DV ++LI+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMH-GRVDEAKQMLDLMVTKGC----LPDVVTYNTLIN 322
Query: 284 MYSRSKKLVLSRRVFDQMKSRNLY----VWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
+ +SK++ ++F +M R L + +I GY Q G P+ A + M + +R
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
+ L + + L++ + + K E+ D + +N +I K G+++ A +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQ----KSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 400 FDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKP 442
F ++S D +++++MIS + + +++ + Y+KM + G+ P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 134/320 (41%), Gaps = 56/320 (17%)
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDAL 326
+G D++ + +I+ R + V++ V +M ++ +++ING+ Q DA+
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
L+ +M+ + G RP D ++N +ID
Sbjct: 160 DLVSKME-EMGFRP-----------------------------------DVVIYNTIIDG 183
Query: 387 YSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
K G ++ A +FD + DA+T++S+++ GR +A + M+ I P+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
+IT +V+ K G E M +Y + TR + P V +++ L G++D+A + +
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 504 KGMPLD---PGPSVWGSLL-----TASVMHGNSMTRDLAYRCLLELEPENPSNYISLSNT 555
M P + +L+ + V G + R++A R L+ + Y ++
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV----GDTITYNTIIQG 358
Query: 556 YASYKRWDVVTEVRTMMKER 575
Y R D E+ + M R
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR 378
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 155/350 (44%), Gaps = 23/350 (6%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRN----VGSFNVMISGWASLGNFASTSGGDLWCFF 223
N++++ YS G +A ++ + MP + V ++N +I+G G + F
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE-----VF 328
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M G + D+ T SLL C K + + + + + D+ SS++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK-----VFSDMRSRDVVPDLVCFSSMMS 383
Query: 284 MYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
+++RS L + F+ +K L ++T +I GY + G A+ L EM ++ G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM-LQQGCA 442
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
+ V+ ++L L ++ T+ L D+ LID + K G+L A +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 400 FDNVSYFR---DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK 456
F + R D +T+++++ +G G + A + M+ I P I+ +++A
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
G + E +++ +I++ +KPTV IC ++ RSG F++ M
Sbjct: 563 KGHLAEAFRVWDEMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 111/552 (20%), Positives = 213/552 (38%), Gaps = 109/552 (19%)
Query: 48 AQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN----VYLWNSLINGYVKN 103
+Q+ G + L+SAY++ G + + + +++ K VY +N++ING K+
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXX 163
++ A +F EM RS + PD T
Sbjct: 319 GKYERAKEVFAEMLRSG----LSPDSTTY------------------------------- 343
Query: 164 XXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS----FNVMISGWASLGNFASTSGGDL 219
S++ + G+ + KVF +M R+V F+ M+S + GN
Sbjct: 344 ----RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA----- 394
Query: 220 WCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGS 279
+F ++ G D L+ C K G L +++ G + DV +
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRK-GMISVAMNLRNEMLQQGCAM----DVVTYN 449
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPEDALILLREMQMK 335
+++ + K L + ++F++M R L Y T +I+G+ + G ++A+ L ++M+ K
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 336 DGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDY 395
++ L D +N L+D + K G +D
Sbjct: 510 ----------------------------------RIRL--DVVTYNTLLDGFGKVGDIDT 533
Query: 396 ASRVF-DNVS--YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLS 452
A ++ D VS I++S +++A G EA + +M+ IKP ++ S++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 453 ACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
+SG +G +I+ + + + + R + +A +K M + G
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV-REENMSKAFGLVKKMEEEQGG 652
Query: 513 SVWGSLLTASVMHG----NSMTR-DLAYRCLLE--LEPENPSNYISLSNTYASYKRWDVV 565
V S++HG N M ++ R ++E + P+ S Y + N + S
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR-STYTCMINGFVSQDNLTEA 711
Query: 566 TEVRTMMKERGL 577
+ M +RG
Sbjct: 712 FRIHDEMLQRGF 723
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 18/268 (6%)
Query: 272 GSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYV----WTAMINGYVQNGAPEDALI 327
GS+ + LI Y +++KL + F ++S+ V A+I V+ G E A
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 328 LLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNG---DTSLFNALI 384
+ +E+ + G+ N +L ++ A G + +++ F ++V+ G D +N LI
Sbjct: 222 VYQEIS-RSGVGINVYTLNIMVNALCKDGKM---EKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 385 DMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
YS G ++ A + + + + T++++I+ HG+ E A + +ML+ G+
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALE 501
PD T S+L K G V E +++ + +R + P + + ++ + RSG LD+AL
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 502 F---IKGMPLDPGPSVWGSLLTASVMHG 526
+ +K L P ++ L+ G
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/449 (18%), Positives = 183/449 (40%), Gaps = 57/449 (12%)
Query: 37 HRAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVY----L 92
H + ++ A++L +G + + L+ GD+ + VF + +++V
Sbjct: 318 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 93 WNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP 152
++S+++ + ++ AL+ F + + ++PD+ + + + +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAG----LIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASL 208
+ N+++ + G+A K+F+EM +R + + ++I G L
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 209 GNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLD 268
GN + F++M+ + D T +LL GK G D +E+ +V +
Sbjct: 494 GNLQNAME-----LFQKMKEKRIRLDVVTYNTLLD-GFGKVGDIDTAKEIWADMVSKEI- 546
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPED 324
+ + + S L++ L + RV+D+M S+N+ + +MI GY ++G D
Sbjct: 547 --LPTPISY-SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALI 384
L +M + +G P+ +S ++ I+ F V + F +
Sbjct: 604 GESFLEKM-ISEGFVPDCISYNTL---------------IYGF---VREENMSKAFGLVK 644
Query: 385 DMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDM 444
M + G L D T++S++ + + +EA V +KM++ G+ PD
Sbjct: 645 KMEEEQGGL------------VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 445 ITVVSVLSACSKSGLVDEGMGIYNSLITR 473
T +++ + E I++ ++ R
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQR 721
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 188/461 (40%), Gaps = 88/461 (19%)
Query: 94 NSLINGYVKNREFGHALVLFR---EMGRSHGGDCVLPDDYTLATI------SKVSGELQD 144
NSL+NG+ A+ L EMG PD T T+ + E
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQ-------PDTVTFTTLVHGLFQHNKASEAVA 201
Query: 145 LVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVGS----FNV 200
LV ++ G +V+ + GE A+ + ++M + + + +N
Sbjct: 202 LVERMVVKG------CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 201 MISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKW-DYGRELH 259
+I G + D + F +M+ +G D FT L+ C G+W D R L
Sbjct: 256 IIDGLCKYKHM-----DDAFDLFNKMETKGIKPDVFTYNPLISCLCN-YGRWSDASRLLS 309
Query: 260 CYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM-KSRNLY----VWTAMIN 314
L KN + D+ ++LID + + KLV + +++D+M KS++ + + +I
Sbjct: 310 DMLEKN-----INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 315 GYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELN 374
G+ + E+ + + REM + GL+
Sbjct: 365 GFCKYKRVEEGMEVFREMSQR---------------------GLV--------------- 388
Query: 375 GDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVT 431
G+T + LI + + D A VF + D +T++ ++ +G E A+V
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 432 YQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLG 491
++ M + +K D++T +++ A K+G V++G ++ SL + +KP V ++
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFC 507
Query: 492 RSGQLDQA----LEFIKGMPLDPGPSVWGSLLTASVMHGNS 528
R G ++A +E + PL P + +L+ A + G+
Sbjct: 508 RKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDE 547
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 155/363 (42%), Gaps = 25/363 (6%)
Query: 178 GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDLWCFF-RRMQCEGYNADAF 236
G FGD +K P ++ F+ ++S A + F DL +MQ G + + +
Sbjct: 61 GLFGDMVK---SRPFPSIVEFSKLLSAIAKMNKF------DLVISLGEQMQNLGISHNLY 111
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRR 296
T + + C ++ L ++ + L G + +SL++ + ++ +
Sbjct: 112 TYSIFINYFCRRSQ-----LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 297 VFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
+ DQM + +T +++G Q+ +A+ L+ M +K G +P+ V+ +V+
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGL 225
Query: 353 ALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDA 409
G + + K ++ D ++N +ID K +D A +F+ + D
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNS 469
T++ +IS +GR +A ML+ I PD++ +++ A K G + E +Y+
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 470 LITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSM 529
++ P V ++ + ++++ +E + M V ++ +++HG
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS--QRGLVGNTVTYTTLIHGFFQ 403
Query: 530 TRD 532
RD
Sbjct: 404 ARD 406
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
D F+ M+ +G + T +SL+ C G+W +L + + ++ K+ ++
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCS-YGRWSDASQL----LSDMIEKKINPNLVT 332
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQ 333
++LID + + K V + +++D M R +++ + +++NG+ + + A + M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
KD P+ V+ +++ + G ++ + L GDT + LI G
Sbjct: 393 SKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 394 DYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
D A +VF + D +T+S ++ +G+ E+A+ + M + IK D+ ++
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD- 509
+ K+G VD+G ++ SL + +KP V ++ L L +A +K M D
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 510 --PGPSVWGSLLTASVMHGN 527
P + +L+ A + G+
Sbjct: 571 PLPNSGTYNTLIRAHLRDGD 590
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 5/211 (2%)
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
++ ++ +I+ + +DAL L +EM+ K G+RPN V+ S++ G Q+
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGL 421
+ + ++N + FNALID + K G A +++D++ S D T++S+++ + +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
H R ++A ++ M+ PD++T +++ KS V++G ++ + R + TV
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
++ L G D A + K M D P
Sbjct: 438 Y-TTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 141/317 (44%), Gaps = 30/317 (9%)
Query: 250 GKWDYGRELHCYLVKNGLDLKM---GSDVHLG--------SSLIDMYSRSKKLVLSRRVF 298
G + Y ++C+ ++ + L + G + LG SSL++ Y K++ + +
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 299 DQMKSR----NLYVWTAMING-YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACA 353
DQM + +T +I+G ++ N A E ++ R +Q G +PN V+ V+
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR--GCQPNLVTYGVVVNGLC 236
Query: 354 LLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAI 410
G + + ++ D +FN +ID K +D A +F + + +
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 411 TWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSL 470
T+SS+IS +GR +A M++ I P+++T +++ A K G E +Y+ +
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 471 ITRYQMKPTVEICACVVDMLGRSGQLDQA---LEFIKGMPLDPGPSVWGSLL-----TAS 522
I R + P + +V+ +LD+A EF+ P + +L+ +
Sbjct: 357 IKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 523 VMHGNSMTRDLAYRCLL 539
V G + R++++R L+
Sbjct: 416 VEDGTELFREMSHRGLV 432
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 69/307 (22%)
Query: 306 LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH 365
LY + +IN + + AL LL +M MK G P+ V+L S LL G GK+I
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSS------LLNGYCHGKRI- 171
Query: 366 AFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDAITWSSMISAYGLHGRG 425
S V AL+D + G Y D IT++++I LH +
Sbjct: 172 --SDAV----------ALVDQMVEMG-------------YRPDTITFTTLIHGLFLHNKA 206
Query: 426 EEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICAC 485
EAV +M+Q G +P+++T V++ K G D + + N + +++ V I
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNT 265
Query: 486 VVDMLGRSGQLDQALEFIKGMPLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPEN 545
++D L + +D AL K M + P N
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKG------------------------------IRP-N 294
Query: 546 PSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVPGISWITISGNTHSFAVGDKAHPSS 605
Y SL + SY RW +++ + M E+ + + +T + +F K +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP----NLVTFNALIDAFVKEGKFVEAE 350
Query: 606 SLIYDML 612
L DM+
Sbjct: 351 KLYDDMI 357
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 163/385 (42%), Gaps = 61/385 (15%)
Query: 170 VMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGNFASTSGGDLWCFFRR 225
V+ + + G+ AM++ +M +R + ++++I G G+ + + F
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA-----FNLFNE 272
Query: 226 MQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMY 285
M+ +G+ AD +L+ C G+WD G +L ++K K+ DV S+LID +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFC-YAGRWDDGAKLLRDMIKR----KITPDVVAFSALIDCF 327
Query: 286 SRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPN 341
+ KL + + +M R + +T++I+G+ + + A +L ++ + G PN
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPN 386
Query: 342 KVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD 401
FN LI+ Y K +D +F
Sbjct: 387 -----------------------------------IRTFNILINGYCKANLIDDGLELFR 411
Query: 402 NVSY---FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSG 458
+S D +T++++I + G+ E A +Q+M+ ++PD+++ +L +G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 459 LVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPL---DPGPSVW 515
++ + I+ I + +M+ + I ++ + + ++D A + +PL P +
Sbjct: 472 EPEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 516 GSLLTASVMHGNSMTRDLAYRCLLE 540
++ G+ DL +R + E
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 64/376 (17%)
Query: 182 DAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWC-FFRRMQCEGYNADAF 236
DA+ +F EM P+ + F+ + S A T DL ++M+ +G + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFS------VVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 237 TIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG--SDVHLGSSLID---MYSR-SKK 290
T++ ++ CC R+L G +K+G D S+LI+ + R S+
Sbjct: 109 TLSIMINCCC-------RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 291 LVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
L L R+ + L A++NG NG DA++L+ M ++ G +PN+V+ VL
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLK 220
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD---------------- 394
G + ++ + ++ D ++ +ID K GSLD
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 395 -------------YASRVFDNVSYFRDAI---------TWSSMISAYGLHGRGEEAVVTY 432
YA R D RD I +S++I + G+ EA +
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
++M+Q GI PD +T S++ K +D+ + + ++++ P + +++ +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCK 399
Query: 493 SGQLDQALEFIKGMPL 508
+ +D LE + M L
Sbjct: 400 ANLIDDGLELFRKMSL 415
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 162/377 (42%), Gaps = 32/377 (8%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFF 223
N ++ + + G+ + K+ D++ +R N+ ++N+ I G G
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA--------V 271
Query: 224 RRMQC---EGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSS 280
R + C +G D T +L+ C K K+ +V GL+ D + ++
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLC-KNSKFQEAEVYLGKMVNEGLE----PDSYTYNT 326
Query: 281 LIDMYSRSKKLVLSRRVFDQMKSRNL----YVWTAMINGYVQNGAPEDALILLREMQMKD 336
LI Y + + L+ R+ + + ++I+G G AL L E +
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE-ALGK 385
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
G++PN + +++ + G ++ Q+ ++ L + FN L++ K G + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 397 S---RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+V + YF D T++ +I Y + E A+ ML G+ PD+ T S+L+
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA---LEFIKGMPLDP 510
K+ ++ M Y +++ + P + +++ L R +LD+A LE +K ++P
Sbjct: 506 LCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 511 GPSVWGSLLTASVMHGN 527
+G+L+ +G+
Sbjct: 565 DAVTFGTLIDGFCKNGD 581
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 185/430 (43%), Gaps = 34/430 (7%)
Query: 167 ANSVMAMYSRCGEFGDAMKVFDEMPQR-----NVGSFNVMISGWASLGNFASTSGGDLWC 221
S++ + R DA+KVFD M + N S++++I G +G G
Sbjct: 233 GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG----- 287
Query: 222 FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSL 281
+M +G T L+ C + G D L ++ G +VH + L
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDR-GLIDKAFNLFDEMIPRGCK----PNVHTYTVL 342
Query: 282 IDMYSRSKKLVLSRRVFDQMKSRNLY----VWTAMINGYVQNGAPEDALILLREMQMKDG 337
ID R K+ + V +M ++ + A+INGY ++G A LL M+ K
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME-KRA 401
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVE--LNGDTSLFNALIDMYSKCGSLDY 395
+PN + ++ +G K +H ++ L+ D +N LID + G ++
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPY--KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 396 ASRVFDNVSYFR---DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLS 452
A ++ +++ F D +T++++I+A+ G+ + A ML+ GI D +T +++
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 453 ACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEF---IKGMPLD 509
K G + + I +L+ + ++ T ++DML + ++ + L I + L
Sbjct: 520 GVCKVGKTRDALFILETLV-KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV 578
Query: 510 PGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENPS--NYISLSNTYASYKRWDVVTE 567
P + +L+ + G+ +T L++L P+ Y + N + R + +
Sbjct: 579 PSVVTYTTLVDGLIRSGD-ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 568 VRTMMKERGL 577
+ + M++ G+
Sbjct: 638 LLSAMQDSGV 647
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 157/372 (42%), Gaps = 31/372 (8%)
Query: 175 SRC-GEFGDAMKVFDEMPQRNVGSFNVMISGWASLGNFASTSGGDL----WCFFRRMQCE 229
SRC E M FDE+ R V F + ++SL S + DL + +RRM+ +
Sbjct: 134 SRCEKEMLKLMYCFDEL--REVFGFRLNYPCYSSL--LMSLAKLDLGFLAYVTYRRMEAD 189
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSK 289
G+ +++ C K G + ++K G L D H+G+SL+ + R
Sbjct: 190 GFVVGMIDYRTIVNALC-KNGYTEAAEMFMSKILKIGFVL----DSHIGTSLLLGFCRGL 244
Query: 290 KLVLSRRVFDQMKSR-----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVS 344
L + +VFD M N ++ +I+G + G E+A L +M K G +P+ +
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRT 303
Query: 345 LISVLPACALLGGLIVGKQIHAFSTKVE--LNGDTSLFNALIDMYSKCGSLDYASRVFDN 402
++ A G ++ K + F + + + LID + G ++ A+ V
Sbjct: 304 YTVLIKALCDRG--LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 403 V---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGL 459
+ F IT++++I+ Y GR A M + KP++ T ++ + G
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 460 VDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM---PLDPGPSVWG 516
+ + + ++ + P + ++D L R G ++ A + + M ++P +
Sbjct: 422 PYKAVHLLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 517 SLLTASVMHGNS 528
+++ A G +
Sbjct: 481 AIINAFCKQGKA 492
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 155/367 (42%), Gaps = 27/367 (7%)
Query: 174 YSRCGEFGDAMKVFDEMPQRNVGS----FNVMISGWASLGNFASTSGGDLWCFFRRMQCE 229
+++ G A+ + DEM ++ + +NV I + +G W FF ++
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA-----WKFFHEIEAN 267
Query: 230 GYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSK 289
G D T S++ V C K + D E+ +L KN + + +++I Y +
Sbjct: 268 GLKPDEVTYTSMIGVLC-KANRLDEAVEMFEHLEKN----RRVPCTYAYNTMIMGYGSAG 322
Query: 290 KLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSL 345
K + + ++ +++ ++ + ++ + G ++AL + EM+ KD PN +
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAA-PNLSTY 380
Query: 346 ISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSY 405
++ G L ++ K L + N ++D K LD A +F+ + Y
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 406 ---FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDE 462
D IT+ S+I G GR ++A Y+KML + + I S++ G ++
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 463 GMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA---LEFIKGMPLDPGPSVWGSLL 519
G IY +I + P +++ +D + ++G+ ++ E IK P + L+
Sbjct: 501 GHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 520 TASVMHG 526
+ G
Sbjct: 560 HGLIKAG 566
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 101/504 (20%), Positives = 209/504 (41%), Gaps = 63/504 (12%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKN----VYLWNSLINGYVKNR 104
+I NG + T ++ + L+ + +F +E Y +N++I GY
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 105 EFGHALVLFREMGRSHGG-------DCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXX 157
+F A L E R+ G +C+L L + KV L+ V+ ++ +
Sbjct: 323 KFDEAYSLL-ERQRAKGSIPSVIAYNCILT---CLRKMGKVDEALK--VFEEMKKDAAPN 376
Query: 158 XXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASLGNFAS 213
N ++ M R G+ A ++ D M + NV + N+M+
Sbjct: 377 LSTY------NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD------RLCK 424
Query: 214 TSGGDLWC-FFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMG 272
+ D C F M + D T SL+ GK G+ D +++ ++ + D +
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLID-GLGKVGRVDDAYKVYEKMLDS--DCRTN 481
Query: 273 SDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYV----QNGAPEDALIL 328
S V+ +SLI + + +++ M ++N ++N Y+ + G PE +
Sbjct: 482 SIVY--TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 329 LREMQMKDGMRPNKVSLISVLPACALLGGLI---VGKQIHAFSTKVELNG---DTSLFNA 382
E++ + + P+ S L+ GLI + + ++ G DT +N
Sbjct: 540 FEEIKARRFV-PDARSY------SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 383 LIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLG 439
+ID + KCG ++ A ++ + + + +T+ S+I R +EA + +++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 440 IKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQA 499
I+ +++ S++ K G +DE I L+ + + P + ++D L ++ ++++A
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNLYTWNSLLDALVKAEEINEA 711
Query: 500 L---EFIKGMPLDPGPSVWGSLLT 520
L + +K + P +G L+
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILIN 735
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAP-EDALIL 328
DV ++++ YSR+ K + +F++MK S L + +++ + + G L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 329 LREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYS 388
L EM+ K G++ ++ + +VL ACA G L K+ A T +NAL+ ++
Sbjct: 269 LDEMRSK-GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 389 KCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMI 445
K G A V + S D++T++ +++AY G +EA + M + G+ P+ I
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 446 TVVSVLSACSKSGLVDEGMGIYNSLITRYQMK-----PTVEICACVVDMLG---RSGQLD 497
T +V+ A K+G DE + ++ Y MK P V+ +LG RS ++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLF------YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 498 QALEFIKGMPLDPGPSVWGSLL 519
+ L +K P + W ++L
Sbjct: 442 KMLCDMKSNGCSPNRATWNTML 463
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 150/355 (42%), Gaps = 59/355 (16%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQRN----VGSFNVMISGWASLGNFASTSGGDLWCFF 223
N++++ Y RCG DA K++ EM + V ++N +++ A G++ S
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN-----VI 549
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLID 283
M+ +G+ T SL+ C K G + G E +K G ++ L +L+
Sbjct: 550 SDMKSKGFKPTE-TSYSLMLQCYAKGGNY-LGIERIENRIKEG---QIFPSWMLLRTLLL 604
Query: 284 MYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMR 339
+ + L S R F K ++ ++ +M++ + +N + A +L ++ +DG+
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR-EDGLS 663
Query: 340 PNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRV 399
P+ V+ +N+L+DMY + G A +
Sbjct: 664 PDLVT-----------------------------------YNSLMDMYVRRGECWKAEEI 688
Query: 400 FDNVSYFR---DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSK 456
+ + D ++++++I + G +EAV +M + GI+P + T + +S +
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 457 SGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI-KGMPLDP 510
G+ E + + + +P VVD R+G+ +A++F+ K DP
Sbjct: 749 MGMFAEIEDVIECM-AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 151/355 (42%), Gaps = 53/355 (14%)
Query: 169 SVMAMYSRCGEFGDAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFR 224
+++ YSR G++ A+ +F+ M P + ++NV++ + +G S +
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR----SWRKILGVLD 270
Query: 225 RMQCEGYNADAFTIASLLPVC------------------CG-KTGKWDYGRELHCY---- 261
M+ +G D FT +++L C CG + G Y L +
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 262 -------LVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWT 310
++K + +D + L+ Y R+ + V + M + N +T
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 311 AMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTK 370
+I+ Y + G ++AL L M+ + G PN + +VL +LLG ++
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMK-EAGCVPNTCTYNAVL---SLLGKKSRSNEMIKMLCD 446
Query: 371 VELNG---DTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAYGLHGR 424
++ NG + + +N ++ + G + +RVF + + D T++++ISAYG G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 425 GEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
+A Y +M + G + T ++L+A ++ G G + + + ++ KPT
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK-GFKPT 560
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 183/464 (39%), Gaps = 61/464 (13%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYL----WNSLINGYVKNR 104
++ GF N + L+ ++ +G LN + + + +K + L +N+LI GY KN
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 105 EFGHALVLFREM---------GRSHGGDCVLPD------------DYTLATISKVSGELQ 143
+ +A L +EM G C+L + L +S G L
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 144 DLVYGKLIPGKSXXXXX----------XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR 193
L+ G GK +N+++ G+ +A ++ E+ R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 194 ----NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCG-- 247
+ S+N +ISG + + F M G D +T + L+ CG
Sbjct: 535 GCVMDRVSYNTLISGCC-----GKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLF 586
Query: 248 KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL- 306
K + + +NG M DV+ S +ID ++++ + FD+M S+N+
Sbjct: 587 NMNKVEEAIQFWDDCKRNG----MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 307 ---YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ 363
V+ +I Y ++G AL L +M+ K G+ PN + S++ +++ + K
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 364 IHAFSTKVELNGDTSLFNALIDMYSKCGSL---DYASRVFDNVSYFRDAITWSSMISAYG 420
+ L + + ALID Y K G + + R + + + IT++ MI Y
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
G EA +M + GI PD IT + K G V E
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 126/571 (22%), Positives = 229/571 (40%), Gaps = 90/571 (15%)
Query: 38 RAHRLTQQCHA-QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE----AKNVYL 92
RA+ + C A ++ G + + +L T ++A+ G + + +F +E A NV
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 93 WNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP 152
+N++I+G + A +F+E G + L + Y L+
Sbjct: 298 FNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTL------------------ITYSILVK 338
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASL 208
G +R GDA V EM ++ NV +N +I +
Sbjct: 339 G--------------------LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 209 GNF-ASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL 267
G+ + DL M +G + + T +L+ C K G+ D L ++ G
Sbjct: 379 GSLNKAIEIKDL------MVSKGLSLTSSTYNTLIKGYC-KNGQADNAERLLKEMLSIGF 431
Query: 268 DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLY----VWTAMINGYVQNGAPE 323
++ GS +S+I + + R +M RN+ + T +I+G ++G
Sbjct: 432 NVNQGS----FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLI-VGKQIHAFSTKVELNG-----DT 377
AL L + NK ++ + ALL GL GK AF + E+ G D
Sbjct: 488 KALELWFQFL-------NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
+N LI LD A D + D T+S +I + EEA+ +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 435 MLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
+ G+ PD+ T ++ C K+ +EG ++ ++++ ++P + ++ RSG
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSG 659
Query: 495 QLDQALEFIKGMP---LDPGPSVWGSLLTA-SVMHGNSMTRDLAYRCLLE-LEPENPSNY 549
+L ALE + M + P + + SL+ S++ + L +E LEP N +Y
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHY 718
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
+L + Y + + +V +++E K V
Sbjct: 719 TALIDGYG---KLGQMVKVECLLREMHSKNV 746
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 183/464 (39%), Gaps = 61/464 (13%)
Query: 49 QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAKNVYL----WNSLINGYVKNR 104
++ GF N + L+ ++ +G LN + + + +K + L +N+LI GY KN
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 105 EFGHALVLFREM---------GRSHGGDCVLPD------------DYTLATISKVSGELQ 143
+ +A L +EM G C+L + L +S G L
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 144 DLVYGKLIPGKSXXXXX----------XXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR 193
L+ G GK +N+++ G+ +A ++ E+ R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 194 ----NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCG-- 247
+ S+N +ISG + + F M G D +T + L+ CG
Sbjct: 535 GCVMDRVSYNTLISGCC-----GKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLF 586
Query: 248 KTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNL- 306
K + + +NG M DV+ S +ID ++++ + FD+M S+N+
Sbjct: 587 NMNKVEEAIQFWDDCKRNG----MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 307 ---YVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQ 363
V+ +I Y ++G AL L +M+ K G+ PN + S++ +++ + K
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 364 IHAFSTKVELNGDTSLFNALIDMYSKCGSL---DYASRVFDNVSYFRDAITWSSMISAYG 420
+ L + + ALID Y K G + + R + + + IT++ MI Y
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGM 464
G EA +M + GI PD IT + K G V E
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 126/571 (22%), Positives = 229/571 (40%), Gaps = 90/571 (15%)
Query: 38 RAHRLTQQCHA-QILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE----AKNVYL 92
RA+ + C A ++ G + + +L T ++A+ G + + +F +E A NV
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 93 WNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIP 152
+N++I+G + A +F+E G + L + Y L+
Sbjct: 298 FNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTL------------------ITYSILVK 338
Query: 153 GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQR----NVGSFNVMISGWASL 208
G +R GDA V EM ++ NV +N +I +
Sbjct: 339 G--------------------LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 209 GNF-ASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL 267
G+ + DL M +G + + T +L+ C K G+ D L ++ G
Sbjct: 379 GSLNKAIEIKDL------MVSKGLSLTSSTYNTLIKGYC-KNGQADNAERLLKEMLSIGF 431
Query: 268 DLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSRNLY----VWTAMINGYVQNGAPE 323
++ GS +S+I + + R +M RN+ + T +I+G ++G
Sbjct: 432 NVNQGS----FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLI-VGKQIHAFSTKVELNG-----DT 377
AL L + NK ++ + ALL GL GK AF + E+ G D
Sbjct: 488 KALELWFQFL-------NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 378 SLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQK 434
+N LI LD A D + D T+S +I + EEA+ +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 435 MLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG 494
+ G+ PD+ T ++ C K+ +EG ++ ++++ ++P + ++ RSG
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSG 659
Query: 495 QLDQALEFIKGMP---LDPGPSVWGSLLTA-SVMHGNSMTRDLAYRCLLE-LEPENPSNY 549
+L ALE + M + P + + SL+ S++ + L +E LEP N +Y
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHY 718
Query: 550 ISLSNTYASYKRWDVVTEVRTMMKERGLKKV 580
+L + Y + + +V +++E K V
Sbjct: 719 TALIDGYG---KLGQMVKVECLLREMHSKNV 746
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 143/346 (41%), Gaps = 64/346 (18%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQ----RNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
NS++ + DAMK+FDE + + +FN++I G +G + +L
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK--AEKALELLGVM 232
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGS----DVHLGS 279
CE D T +L+ C K+ + + E+ D+K GS DV +
Sbjct: 233 SGFGCE---PDIVTYNTLIQGFC-KSNELNKASEMF-------KDVKSGSVCSPDVVTYT 281
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLY-------------------------------- 307
S+I Y ++ K+ + + D M +Y
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 308 -------VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
+T++I+GY + G L EM + GM PN + ++ A L+
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSILINALCNENRLLK 400
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR---DAITWSSMIS 417
+++ ++ ++N +ID + K G ++ A+ + + + + D IT++ +I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 418 AYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ + GR EAV + KM+ +G PD ITV S+LS K+G+ E
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 308 VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF 367
V +++N V+ EDA+ L E K I + C VGK A
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG------VGKAEKAL 226
Query: 368 STKVELNG-----DTSLFNALIDMYSKCGSLDYASRVFDNVSYFR----DAITWSSMISA 418
++G D +N LI + K L+ AS +F +V D +T++SMIS
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
Y G+ EA ML+LGI P +T ++ +K+G + I +I+ + P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FGCFP 345
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGM 506
V ++D R GQ+ Q + M
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 143/346 (41%), Gaps = 64/346 (18%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMPQ----RNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
NS++ + DAMK+FDE + + +FN++I G +G + +L
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK--AEKALELLGVM 232
Query: 224 RRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGS----DVHLGS 279
CE D T +L+ C K+ + + E+ D+K GS DV +
Sbjct: 233 SGFGCE---PDIVTYNTLIQGFC-KSNELNKASEMF-------KDVKSGSVCSPDVVTYT 281
Query: 280 SLIDMYSRSKKLVLSRRVFDQMKSRNLY-------------------------------- 307
S+I Y ++ K+ + + D M +Y
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 308 -------VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
+T++I+GY + G L EM + GM PN + ++ A L+
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSILINALCNENRLLK 400
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFR---DAITWSSMIS 417
+++ ++ ++N +ID + K G ++ A+ + + + + D IT++ +I
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 418 AYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEG 463
+ + GR EAV + KM+ +G PD ITV S+LS K+G+ E
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 308 VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAF 367
V +++N V+ EDA+ L E K I + C VGK A
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG------VGKAEKAL 226
Query: 368 STKVELNG-----DTSLFNALIDMYSKCGSLDYASRVFDNVSYFR----DAITWSSMISA 418
++G D +N LI + K L+ AS +F +V D +T++SMIS
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 419 YGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKP 478
Y G+ EA ML+LGI P +T ++ +K+G + I +I+ + P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FGCFP 345
Query: 479 TVEICACVVDMLGRSGQLDQALEFIKGM 506
V ++D R GQ+ Q + M
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 176/439 (40%), Gaps = 70/439 (15%)
Query: 77 MSRLVFHSIEAK---NVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLA 133
M ++ +E K N+Y +N ++NGY K L
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCK-----------------------------LG 232
Query: 134 TISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMP-- 191
+ + + + +V L P S++ Y + + A KVF+EMP
Sbjct: 233 NVEEANQYVSKIVEAGLDPD----------FFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 192 --QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKT 249
+RN ++ +I G + + F +M+ + T L+ CG
Sbjct: 283 GCRRNEVAYTHLIHGLC-----VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR----N 305
K + LVK + + ++H + LID K +R + QM + N
Sbjct: 338 RKSEALN-----LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 306 LYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIH 365
+ + A+INGY + G EDA+ ++ M+ + + PN + ++ V K +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRK-LSPNTRTYNELIKGYCKSN---VHKAMG 448
Query: 366 AFSTKVELN--GDTSLFNALIDMYSKCGSLDYASRVF---DNVSYFRDAITWSSMISAYG 420
+ +E D +N+LID + G+ D A R+ ++ D T++SMI +
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 421 LHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTV 480
R EEA + + Q G+ P+++ +++ K+G VDE + ++++ + ++
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 481 EICACVVDMLGRSGQLDQA 499
A ++ L G+L +A
Sbjct: 569 TFNA-LIHGLCADGKLKEA 586
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 178/454 (39%), Gaps = 66/454 (14%)
Query: 48 AQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK----NVYLWNSLINGYVKN 103
++I+ G + F T L+ Y DL+ + VF+ + K N + LI+G
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 104 REFGHALVLFREMGRSHGGDCVLPDDYTLATI------SKVSGELQDLV----------- 146
R A+ LF +M D P T + S+ E +LV
Sbjct: 302 RRIDEAMDLFVKMK----DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 147 ---YGKLIP---------------GKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFD 188
Y LI G+ N+++ Y + G DA+ V +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 189 EMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPV 244
M R N ++N +I G+ N G +M D T SL+
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCK-SNVHKAMG-----VLNKMLERKVLPDVVTYNSLIDG 471
Query: 245 CCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKSR 304
C ++G +D L + GL D +S+ID +SK++ + +FD ++ +
Sbjct: 472 QC-RSGNFDSAYRLLSLMNDRGL----VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 305 ----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIV 360
N+ ++TA+I+GY + G ++A ++L +M K+ + PN ++ +++ G L
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKE 585
Query: 361 GKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMIS 417
+ K+ L S LI K G D+A F + DA T+++ I
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 418 AYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
Y GR +A KM + G+ PD+ T S++
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 34/286 (11%)
Query: 183 AMKVFDEMPQR----NVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTI 238
AM V ++M +R +V ++N +I G GNF S + M G D +T
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA-----YRLLSLMNDRGLVPDQWTY 500
Query: 239 ASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVF 298
S++ C K+ + + +L L + G++ +V + ++LID Y ++ K+ + +
Sbjct: 501 TSMIDSLC-KSKRVEEACDLFDSLEQKGVN----PNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 299 DQMKSRNLY----VWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACAL 354
++M S+N + A+I+G +G ++A LL E +K G++P VS ++L +
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPT-VSTDTIL----I 609
Query: 355 LGGLIVGKQIHAFSTKVEL-----NGDTSLFNALIDMYSKCGSL----DYASRVFDNVSY 405
L G HA+S ++ D + I Y + G L D +++ +N
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN-GV 668
Query: 406 FRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
D T+SS+I YG G+ A ++M G +P T +S++
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 27/350 (7%)
Query: 168 NSVMAMYSRCGEFGDAMKVFDEMP----QRNVGSFNVMISGWASLGNFASTSGGDLWCFF 223
NSV++ + G+ A + MP + +V S+N +I G G+ S S
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS----LVLE 115
Query: 224 RRMQCEGY--NADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGS-DVHLGSS 280
G+ D + SL K E+ Y+ G+ LK S +V S+
Sbjct: 116 SLRASHGFICKPDIVSFNSLF----NGFSKMKMLDEVFVYM---GVMLKCCSPNVVTYST 168
Query: 281 LIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
ID + +S +L L+ + F MK S N+ +T +I+GY + G E A+ L +EM+ +
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR-RV 227
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
M N V+ +++ G + +++++ + + ++ ++ +ID + + G D A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 397 SRVFD---NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+ N D + +IS +G+ +EA + M + + PDM+ ++++A
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFI 503
KSG + + +Y+ LI R +P V + ++D + ++GQL +A+ +
Sbjct: 348 YFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 121/259 (46%), Gaps = 17/259 (6%)
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
+ LID Y ++ L ++ ++ +M+ S N+ +TA+I+G+ + G + A + M +
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM-V 260
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
+D + PN + +++ G + A + D + + +I G L
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 395 YASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVL 451
A+ + +++ D + +++M++AY GR + AV Y K+++ G +PD++ + +++
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 452 SACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSG---QLDQALEFIKGMPL 508
+K+G + E + +Y + + TV ++D L + G ++++ I L
Sbjct: 381 DGIAKNGQLHEAI-VYFCIEKANDVMYTV-----LIDALCKEGDFIEVERLFSKISEAGL 434
Query: 509 DPGPSVWGSLLTASVMHGN 527
P ++ S + GN
Sbjct: 435 VPDKFMYTSWIAGLCKQGN 453
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 40/332 (12%)
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGM--RPNKVSLISVLPACALLGGL-----IVG 361
+ ++I+G+ +NG A ++L ++ G +P+ VS S+ + + L +G
Sbjct: 94 YNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG 153
Query: 362 KQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVSYFRDA-----ITWSSMI 416
+ S V ++ ID + K G L A + F ++ RDA +T++ +I
Sbjct: 154 VMLKCCSPNV------VTYSTWIDTFCKSGELQLALKSFHSMK--RDALSPNVVTFTCLI 205
Query: 417 SAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQM 476
Y G E AV Y++M ++ + +++T +++ K G + +Y+ ++ ++
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RV 264
Query: 477 KPTVEICACVVDMLGRSGQLDQALEFI-----KGMPLDPGPSVWGSLLTASVMHGNSMTR 531
+P + ++D + G D A++F+ +GM LD + +G +++ + GN +
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD--ITAYGVIISG--LCGNGKLK 320
Query: 532 DLAYRCLLELEPEN--PSNYI--SLSNTYASYKRWDVVTEVRTMMKERGLKK-----VPG 582
+ A + ++E + P I ++ N Y R + + ERG +
Sbjct: 321 E-ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 583 ISWITISGNTHSFAVGDKAHPSSSLIYDMLDD 614
I I +G H V ++ ++Y +L D
Sbjct: 380 IDGIAKNGQLHEAIVYFCIEKANDVMYTVLID 411
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 15/280 (5%)
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
++ ++NGY + G + L+ M+ K G++PN S++ + L ++ +
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRG 425
+ + DT ++ LID + K G + AS+ F + D +T++++IS + G
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 426 EEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICAC 485
EA + +M G++PD +T +++ K+G + + ++N +I + P V
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTT 461
Query: 486 VVDMLGRSGQLDQALEFIKGM---PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELE 542
++D L + G LD A E + M L P + S++ GN + A + + E E
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAVKLVGEFE 518
Query: 543 P----ENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
+ Y +L + Y D E+ M +GL+
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 168/450 (37%), Gaps = 102/450 (22%)
Query: 41 RLTQQCHAQILTN--GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK----NVYLWN 94
R+ + H +L G+ + + +V+ Y G+L+ + ++ K N Y++
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 95 SLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGK 154
S+I + + A F EM R +LPD +VY LI G
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQG----ILPDT---------------VVYTTLIDG- 360
Query: 155 SXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGN 210
+ + G+ A K F EM R++ ++ +ISG+ +G+
Sbjct: 361 -------------------FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLK 270
G L F M C+G D+ T L+ C K G +H ++++ G
Sbjct: 402 MVE--AGKL---FHEMFCKGLEPDSVTFTELINGYC-KAGHMKDAFRVHNHMIQAGC--- 452
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM----KSRNLYVWTAMINGYVQNGAPEDAL 326
+V ++LID + L + + +M N++ + +++NG ++G E+A+
Sbjct: 453 -SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
L+ E + LN DT + L+D
Sbjct: 512 KLVGEFEAAG------------------------------------LNADTVTYTTLMDA 535
Query: 387 YSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
Y K G +D A + + +T++ +++ + LHG E+ ML GI P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITR 473
T S++ + IY + +R
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 15/280 (5%)
Query: 309 WTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFS 368
++ ++NGY + G + L+ M+ K G++PN S++ + L ++ +
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 369 TKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRG 425
+ + DT ++ LID + K G + AS+ F + D +T++++IS + G
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 426 EEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICAC 485
EA + +M G++PD +T +++ K+G + + ++N +I + P V
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTT 461
Query: 486 VVDMLGRSGQLDQALEFIKGM---PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELE 542
++D L + G LD A E + M L P + S++ GN + A + + E E
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAVKLVGEFE 518
Query: 543 P----ENPSNYISLSNTYASYKRWDVVTEVRTMMKERGLK 578
+ Y +L + Y D E+ M +GL+
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 168/450 (37%), Gaps = 102/450 (22%)
Query: 41 RLTQQCHAQILTN--GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK----NVYLWN 94
R+ + H +L G+ + + +V+ Y G+L+ + ++ K N Y++
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 95 SLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGK 154
S+I + + A F EM R +LPD +VY LI G
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQG----ILPDT---------------VVYTTLIDG- 360
Query: 155 SXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGN 210
+ + G+ A K F EM R++ ++ +ISG+ +G+
Sbjct: 361 -------------------FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 211 FASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLK 270
G L F M C+G D+ T L+ C K G +H ++++ G
Sbjct: 402 MVE--AGKL---FHEMFCKGLEPDSVTFTELINGYC-KAGHMKDAFRVHNHMIQAGC--- 452
Query: 271 MGSDVHLGSSLIDMYSRSKKLVLSRRVFDQM----KSRNLYVWTAMINGYVQNGAPEDAL 326
+V ++LID + L + + +M N++ + +++NG ++G E+A+
Sbjct: 453 -SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 327 ILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDM 386
L+ E + LN DT + L+D
Sbjct: 512 KLVGEFEAAG------------------------------------LNADTVTYTTLMDA 535
Query: 387 YSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPD 443
Y K G +D A + + +T++ +++ + LHG E+ ML GI P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 444 MITVVSVLSACSKSGLVDEGMGIYNSLITR 473
T S++ + IY + +R
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
Query: 274 DVHLGSSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILL 329
D H ++++ R+K+ ++ D+M N + +I+ Y + ++A+ +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 330 REMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSK 389
+MQ + G P++V+ +++ A G L + ++ + L+ DT ++ +I+ K
Sbjct: 418 NQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK 476
Query: 390 CGSLDYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMIT 446
G L A R+F + + +T++ MI+ + E A+ Y+ M G +PD +T
Sbjct: 477 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 447 VVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM 506
V+ G ++E G++ + R P + +VD+ G++G +D+A ++ + M
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 22/293 (7%)
Query: 176 RCGEFGDAMKVFDEMP----QRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGY 231
R +FG+ K+ DEM + N ++N +I + F +MQ G
Sbjct: 371 RAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMN-----VFNQMQEAGC 425
Query: 232 NADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKL 291
D T +L+ + K G D +++ + + GL D S +I+ ++ L
Sbjct: 426 EPDRVTYCTLIDIH-AKAGFLDIAMDMYQRMQEAGLS----PDTFTYSVIINCLGKAGHL 480
Query: 292 VLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLIS 347
+ R+F +M + NL + MI + + E AL L R+MQ G +P+KV+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ-NAGFQPDKVTYSI 539
Query: 348 VLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFD---NVS 404
V+ G L + + A + D ++ L+D++ K G++D A + +
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 405 YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
+ T +S++S + R EA Q ML LG+ P + T +LS C+ +
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 11/242 (4%)
Query: 267 LDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMKS----RNLYVWTAMINGYVQNGAP 322
+ L + D+ SSL++ + S + + V QM+ R++ V T +I+ +N
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 323 EDALILLREMQMKDGMRPNKVSLISVLPACALLGGLI-VGKQIHAFSTKVELNGDTSLFN 381
AL +L+ M+ + G+ PN V+ S++ G L +++H +K ++N + F+
Sbjct: 65 VPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK-KINPNVITFS 122
Query: 382 ALIDMYSKCGSLDYASRVFD---NVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQL 438
ALID Y+K G L V+ +S + T+SS+I +H R +EA+ M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 439 GIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQ 498
G P+++T ++ + KS VD+G+ + + + R TV C ++ ++G++D
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS-CNTLIKGYFQAGKIDL 241
Query: 499 AL 500
AL
Sbjct: 242 AL 243
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 143/320 (44%), Gaps = 17/320 (5%)
Query: 218 DLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHL 277
D F+ M+ +G + T +SL+ C G+W +L + + ++ K+ ++
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCS-YGRWSDASQL----LSDMIEKKINPNLVT 257
Query: 278 GSSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQ 333
++LID + + K V + ++ D M R +++ + ++ING+ + + A + M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 334 MKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSL 393
KD P+ + +++ + G ++ + L GDT + LI G
Sbjct: 318 SKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 394 DYASRVFDNV---SYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSV 450
D A +VF + D +T+S ++ +G+ E+A+ + M + IK D+ ++
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 451 LSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD- 509
+ K+G VD+G ++ SL + +KP V ++ L L +A +K M D
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 510 --PGPSVWGSLLTASVMHGN 527
P + +L+ A + G+
Sbjct: 496 PLPDSGTYNTLIRAHLRDGD 515
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 305 NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQI 364
++ ++ +I+ + +DAL L +EM+ K G+RPN V+ S++ G Q+
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 365 HAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDAITWSSMISAYGL 421
+ + ++N + FNALID + K G A ++ D++ S D T++S+I+ + +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 422 HGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVE 481
H R ++A ++ M+ PD+ T +++ KS V++G ++ + R + TV
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 482 ICACVVDMLGRSGQLDQALEFIKGMPLDPGP 512
++ L G D A + K M D P
Sbjct: 363 Y-TTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 41/255 (16%)
Query: 279 SSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPEDALILLREMQM 334
+ L+ ++ KK L + ++M+ S NLY + +IN + + AL LL +M M
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM-M 72
Query: 335 KDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLD 394
K G P+ V+L S LL G GK+I S V AL+D + G
Sbjct: 73 KLGYEPSIVTLSS------LLNGYCHGKRI---SDAV----------ALVDQMVEMG--- 110
Query: 395 YASRVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSAC 454
Y D IT++++I LH + EAV +M+Q G +P+++T V++
Sbjct: 111 ----------YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 455 SKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMP---LDPG 511
K G +D + N + +++ V I ++D L + +D AL K M + P
Sbjct: 161 CKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 512 PSVWGSLLTASVMHG 526
+ SL++ +G
Sbjct: 220 VVTYSSLISCLCSYG 234
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 162/368 (44%), Gaps = 35/368 (9%)
Query: 191 PQRNVGSFNVMISGWASLGNFASTSGGDLWCFF-RRMQCEGYNADAFTIASLLPVCCGKT 249
P ++ FN ++S A + F DL +MQ G + + +T L+ C ++
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKF------DLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 250 GKWDYGRELHCYLVKNGLDLKMGSDVHLG--SSLIDMYSRSKKLVLSRRVFDQMKSR--- 304
++ L G +K+G + + SSL++ Y K++ + + DQM
Sbjct: 60 -------QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 112
Query: 305 -NLYVWTAMING-YVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGK 362
+ +T +I+G ++ N A E ++ R +Q G +PN V+ V+ G + +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQR--GCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 363 QIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWSSMISAY 419
+ ++ D +FN +ID K +D A +F + + +T+SS+IS
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 420 GLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPT 479
+GR +A M++ I P+++T +++ A K G E +++ +I R + P
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPD 289
Query: 480 VEICACVVDMLGRSGQLDQA---LEFIKGMPLDPGPSVWGSLL-----TASVMHGNSMTR 531
+ +++ +LD+A EF+ P + +L+ + V G + R
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 532 DLAYRCLL 539
++++R L+
Sbjct: 350 EMSHRGLV 357
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 135/313 (43%), Gaps = 17/313 (5%)
Query: 279 SSLIDMYSRSKKL--VLSRRVFDQMKSRNLYVWTAMIN----GYVQNGAPEDALILLREM 332
S +I +RS K+ V+ R++ +++ L + ++N G+ ++G P AL LL M
Sbjct: 236 SLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLL-GM 294
Query: 333 QMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGS 392
G+ +L+S++ A A G + + + + + T +NAL+ Y K G
Sbjct: 295 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 393 LDYASRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVS 449
L A + + D T+S +I AY GR E A + ++M ++P+
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414
Query: 450 VLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGM--- 506
+L+ G + + + + +KP + V+D G+ LD A+ M
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 507 PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPENP--SNYISLSNTYASYKRWDV 564
++P W +L+ HG + + + +E P + Y + N+Y +RWD
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA-MERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 565 VTEVRTMMKERGL 577
+ + MK +G+
Sbjct: 533 MKRLLGKMKSQGI 545
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 181/457 (39%), Gaps = 80/457 (17%)
Query: 65 LVSAYATSGDLNMSRLVFHSIEAKNV----YLWNSLINGYVKNREFGHALVLFREMGRSH 120
++SA A SG + +F + + +N+L+ GYVK A + EM +
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR- 368
Query: 121 GGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEF 180
V PD++T + + +++ + + ++A + GE+
Sbjct: 369 ---GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 181 GDAMKVFDEM------PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNAD 234
+V EM P R +NV+I + G F F RM EG D
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQF--YNVVID---TFGKFNCLDHA--MTTFDRMLSEGIEPD 478
Query: 235 AFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
T +L+ C K G+ E+ + + G L + ++ +I+ Y ++
Sbjct: 479 RVTWNTLIDCHC-KHGRHIVAEEMFEAMERRGC-LPCATTYNI---MINSYGDQERWDDM 533
Query: 295 RRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
+R+ +MKS+ N+ T +++ Y ++G DA+ L EM+ G++P+
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK-SVGLKPS--------- 583
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS---RVFDNVSYFR 407
++++NALI+ Y++ G + A RV +
Sbjct: 584 --------------------------STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIY 467
+ +S+I+A+G R EA Q M + G+KPD++T +++ A + + +Y
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 468 NSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
+I + C D RS L AL ++K
Sbjct: 678 EEMI----------MSGCKPDRKARS-MLRSALRYMK 703
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/371 (17%), Positives = 159/371 (42%), Gaps = 30/371 (8%)
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGNFASTSGGDLWCFFR 224
S+++ + G +A +F+E+ Q + ++N ++ G+ G D
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLK-----DAESMVS 363
Query: 225 RMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDM 284
M+ G + D T SLL G+W+ R ++K + + + S L+
Sbjct: 364 EMEKRGVSPDEHTY-SLLIDAYVNAGRWESAR----IVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 285 YSRSKKLVLSRRVFDQMKS------RNLYVWTAMINGYVQNGAPEDALILLREMQMKDGM 338
+ + + +V +MKS R Y +I+ + + + A+ M + +G+
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFY--NVVIDTFGKFNCLDHAMTTFDRM-LSEGI 475
Query: 339 RPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASR 398
P++V+ +++ G IV +++ + + +N +I+ Y D R
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 399 VFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACS 455
+ + + +T ++++ YG GR +A+ ++M +G+KP ++++A +
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 456 KSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLG---RSGQLDQALEFIKGMPLDPGP 512
+ GL ++ + + ++T +KP++ +++ G R + L+++K + P
Sbjct: 596 QRGLSEQAVNAFR-VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 513 SVWGSLLTASV 523
+ +L+ A +
Sbjct: 655 VTYTTLMKALI 665
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 194/476 (40%), Gaps = 72/476 (15%)
Query: 87 AKNVYLWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLV 146
A NVY N L+ G +N E G A+ L REM R+ ++PD ++
Sbjct: 139 AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS----LMPDVFSY-------------- 180
Query: 147 YGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMI 202
N+V+ + E A+++ +EM ++ ++I
Sbjct: 181 ---------------------NTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 203 SGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYL 262
+ G G F + M+ G AD SL+ C G+ D G+ L +
Sbjct: 220 DAFCKAGKMDEAMG-----FLKEMKFMGLEADLVVYTSLIRGFC-DCGELDRGKALFDEV 273
Query: 263 VKNGLDLKMGSDVHLG-SSLIDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYV 317
++ G S + ++LI + + +L + +F+ M R N+Y +T +I+G
Sbjct: 274 LERG-----DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 318 QNGAPEDALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDT 377
G ++AL LL M KD PN V+ ++ G + +I K D
Sbjct: 329 GVGKTKEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 378 SLFNALIDMYSKCGSLDYASRVF-----DNVSYFRDAITWSSMISAYGLHGRGEEAVVTY 432
+N L+ G LD AS++ D+ D I+++++I R +A+ Y
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 433 QKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGR 492
+++ D +T +L++ K+G V++ M ++ I+ ++ + ++D +
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ-ISDSKIVRNSDTYTAMIDGFCK 506
Query: 493 SGQLDQALEFIKGM---PLDPGPSVWGSLLTASVMHGNSMTRDLAYRCLLELEPEN 545
+G L+ A + M L P + LL++ G + D A+R E++ +N
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG---SLDQAWRLFEEMQRDN 559
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 193/471 (40%), Gaps = 38/471 (8%)
Query: 54 GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSI----EAKNVYLWNSLINGYVKNREFGHA 109
G + + T L+ + G+L+ + +F + ++ +N+LI G+ K + A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 110 LVLFREMGRSHGGDCVLPDDYT-------LATISKVSGELQDLVYGKLIPGKSXXXXXXX 162
+F M V P+ YT L + K LQ L L+ K
Sbjct: 302 SEIFEFMIERG----VRPNVYTYTGLIDGLCGVGKTKEALQLL---NLMIEKDEEPNAVT 354
Query: 163 XXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGNFASTSGGD 218
N ++ + G DA+++ + M +R ++N+++ G + G+ S
Sbjct: 355 Y----NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK-- 408
Query: 219 LWCFFRRMQCEGY-NADAFTIASLLPVCCGKTGKWDYGRELHCYLV-KNGLDLKMGSDVH 276
+ ++ Y + D + +L+ C K + +++ LV K G ++ +++
Sbjct: 409 --LLYLMLKDSSYTDPDVISYNALIHGLC-KENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 277 LGSSLIDMYSRSKKLVLSRRVFDQMKSRNLYVWTAMINGYVQNGAPEDALILLREMQMKD 336
L S+L +K + L +++ D RN +TAMI+G+ + G A LL +M++ +
Sbjct: 466 LNSTL-KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 337 GMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYA 396
++P+ +L + G L ++ + D FN +ID K G + A
Sbjct: 525 -LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 397 SRVFDNVS---YFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA 453
+ +S D T+S +I+ + G +EA+ + KM+ G +PD SVL
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 454 CSKSGLVDEGMGIYNSLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIK 504
C G D+ + L+ + + C + M S +D A ++
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 137/619 (22%), Positives = 231/619 (37%), Gaps = 136/619 (21%)
Query: 31 LQLTVDH----RAHRLTQQCHAQILTNGFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIE 86
L L +DH + R+T IL + F + F+ + + A D+ +F+ ++
Sbjct: 147 LTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMK 206
Query: 87 AKNVY----LWNSLINGYVKNREFGHALVLFREMGRSHGGDCVLPDDYTLATISKVSGEL 142
+Y ++N LI+G K + A LF EM +LP T T+ +
Sbjct: 207 HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR----LLPSLITYNTLIDGYCKA 262
Query: 143 QDLVYGKLIPGKSXXXXXXXXXXXANSVMAMYSRCGEFGDAMKVFDEMPQRNVG------ 196
+ + + N+++ + G DA V EM +++G
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM--KDLGFVPDAF 320
Query: 197 SFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNADAFTIASLLPVCC--GKTGKWD- 253
+F+++ G++S + G + G +A+T + LL C GK K +
Sbjct: 321 TFSILFDGYSSNEKAEAALG-----VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 254 -YGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK---------- 302
GRE+ LV N + + +++ID Y R LV +R + M+
Sbjct: 376 ILGREMAKGLVPNEV---------IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 303 -----------------------------SRNLYVWTAMINGYVQNGAPEDALILLREMQ 333
S ++ + +I GY + + +L+EM+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 334 MKDGMRPNKVS---LISVL-PACALLGGLIV--------------------------GKQ 363
+G PN VS LI+ L LL IV GK
Sbjct: 487 -DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 364 IHAF-------STKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNVS---YFRDAITWS 413
AF +ELN T +N LID S G L A + +S D T++
Sbjct: 546 EDAFRFSKEMLKKGIELNLVT--YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 414 SMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
S+IS YG G + + Y++M + GIKP + T ++S C+K EG+ + L
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-----EGIELTERLFGE 658
Query: 474 YQMKPTVEICACVVDMLGRSGQLDQALEFIKGM-----PLDP---GPSVWGSLLTASVMH 525
+KP + + V+ G +++A K M LD + G L +
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 526 GNSMTRDLAYRCLLELEPE 544
S+ ++ R E+EPE
Sbjct: 719 VRSLIDEMNAR---EMEPE 734
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 182/450 (40%), Gaps = 37/450 (8%)
Query: 54 GFAQNPFLTTRLVSAYATSGDLNMSRLVFHSIEAK----NVYLWNSLINGYVKNREFGHA 109
GF + F + L Y+++ + V+ + N Y + L+N K + A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 110 L-VLFREMGRSHGGDCVLPDDYTLATISKVSGELQDLVYGKLIPGKSXXXXXXXXXXXAN 168
+L REM + ++P++ T+ DLV ++ N
Sbjct: 374 EEILGREMAKG-----LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 169 SVMAMYSRCGEFGDAMKVFDEMPQRNVG----SFNVMISGWASLGNFASTSGGDLWCF-- 222
++ + GE +A K ++M + V ++N++I G+ F CF
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK-------CFDI 481
Query: 223 FRRMQCEGYNADAFTIASLLPVCCGKTGKWDYGRELHCYLVKNGL-DLKMGSDVHLGSSL 281
+ M+ G + + +L+ C + + L +VK + D + V + + L
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGS------KLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 282 IDMYSRSKKLVLSRRVFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDG 337
ID K+ + R +M + NL + +I+G G +A LL E+ K G
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK-G 594
Query: 338 MRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYAS 397
++P+ + S++ G + ++ + + ++ LI + +K G ++
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTE 653
Query: 398 RVFDNVSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKS 457
R+F +S D + ++ ++ Y +HG E+A ++M++ I D T S++ K
Sbjct: 654 RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 458 GLVDEGMGIYNSLITRYQMKPTVEICACVV 487
G + E + + + R +M+P + +V
Sbjct: 714 GKLCEVRSLIDEMNAR-EMEPEADTYNIIV 742
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 154/369 (41%), Gaps = 32/369 (8%)
Query: 248 KTGKWDYGRELHCYL----VKNGLDL--KMGSD-----VHLGSSLIDMYSRSKKLVLSRR 296
+ K+ YG+ + + V GL+L +M D V + + LID + K++ + +
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 297 VFDQMKSR----NLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLPAC 352
+FD+M +R +L + +I+GY + G PE + +RE D + P+ ++ ++L
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF-KVRERMKADHIEPSLITFNTLLKGL 294
Query: 353 ALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFRDA 409
G + + + + D F+ L D YS + A V++ +A
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 410 ITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSA-CSKSGLVDEGMGIYN 468
T S +++A G+ E+A + + G+ P+ + +++ C K LV M I
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI-- 412
Query: 469 SLITRYQMKPTVEICACVVDMLGRSGQLDQALEFIKGMPLD---PGPSVWGSLLTASVMH 525
+ + MKP C++ G+++ A + + M L P + L+ +
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG---Y 469
Query: 526 GNSMTRDLAYRCLLELEPE----NPSNYISLSNTYASYKRWDVVTEVRTMMKERGLKKVP 581
G D + L E+E N +Y +L N + V+ M++RG+
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 582 GISWITISG 590
I + I G
Sbjct: 530 RIYNMLIDG 538
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 142/299 (47%), Gaps = 22/299 (7%)
Query: 179 EFGDAMKVFDEM----PQRNVGSFNVMISGWASLGNFASTSGGDLWCFFRRMQCEGYNAD 234
+F DA+ +F +M P ++ F+ ++ A L + + FR ++ G + D
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVIS-----LFRHLEMLGISHD 113
Query: 235 AFTIASLLPVCCGKTGKWDYGRELHCYLVKNGLDLKMGSDVHLGSSLIDMYSRSKKLVLS 294
++ +L+ C + + ++K G + S V GS L++ + + +
Sbjct: 114 LYSFTTLIDCFC-RCARLSLALSCLGKMMKLGFE---PSIVTFGS-LVNGFCHVNRFYEA 168
Query: 295 RRVFDQM----KSRNLYVWTAMINGYVQNGAPEDALILLREMQMKDGMRPNKVSLISVLP 350
+ DQ+ N+ ++ +I+ + G AL +L+ M+ K G+RP+ V+ S++
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLIT 227
Query: 351 ACALLGGLIVGKQIHAFSTKVELNGDTSLFNALIDMYSKCGSLDYASRVFDNV---SYFR 407
G V +I + ++ ++ D F+ALID+Y K G L A + ++ + S
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 408 DAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIKPDMITVVSVLSACSKSGLVDEGMGI 466
+ +T++S+I+ +HG +EA ++ G P+ +T ++++ K+ VD+GM I
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 269 LKMGSDVHLGSSLIDMYSRSKKLVLSRRVFDQMK----SRNLYVWTAMINGYVQNGAPED 324
L + D++ ++LID + R +L L+ +M ++ + +++NG+ +
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 325 ALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNALI 384
A+ L+ ++ + G PN V +++ + G + + K+ + D +N+LI
Sbjct: 168 AMSLVDQI-VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 385 DMYSKCGSLDYASRVFDNVSYF---RDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGIK 441
G+ ++R+ ++ D IT+S++I YG G+ EA Y +M+Q +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 442 PDMITVVSVLSACSKSGLVDEGMGIYNSLITR 473
P+++T S+++ GL+DE + N L+++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 48/298 (16%)
Query: 324 DALILLREMQMKDGMRPNKVSLISVLPACALLGGLIVGKQIHAFSTKVELNGDTSLFNAL 383
DAL L +M + P+ V +L A A L + + ++ D F L
Sbjct: 62 DALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 384 IDMYSKCGSLDYASRVFDN---VSYFRDAITWSSMISAYGLHGRGEEAVVTYQKMLQLGI 440
ID + +C L A + + +T+ S+++ + R EA+ +++ LG
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 441 KPDMITVVSVLSACSKSGLVD---------EGMGI------YNSLITRY----------- 474
+P+++ +++ + + G V+ + MGI YNSLITR
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 475 --------QMKPTVEICACVVDMLGRSGQLDQALEFIKGM---PLDPGPSVWGSLLTASV 523
+ P V + ++D+ G+ GQL +A + M ++P + SL+
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 524 MHGNSMTRDLAYRCLLELEPE----NPSNYISLSNTYASYKRWDVVTEVRTMMKERGL 577
+HG D A + L L + N Y +L N Y KR D ++ +M G+
Sbjct: 301 IHG---LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355