Miyakogusa Predicted Gene

Lj0g3v0334479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0334479.1 Non Chatacterized Hit- tr|K4BML6|K4BML6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,71.21,3e-19,
,CUFF.22832.1
         (84 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79870.1 | Symbols:  | D-isomer specific 2-hydroxyacid dehydr...    86   5e-18
AT1G79870.2 | Symbols:  | D-isomer specific 2-hydroxyacid dehydr...    86   5e-18

>AT1G79870.1 | Symbols:  | D-isomer specific 2-hydroxyacid
          dehydrogenase family protein | chr1:30044794-30045851
          FORWARD LENGTH=313
          Length = 313

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 49/66 (74%)

Query: 1  MGSIGVLLVCQVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADAE 60
          M SIGVL++C +  YLE EL+KRF L R W  P+K+ LL  H  SIRAVVGNASAGADA+
Sbjct: 1  MESIGVLMMCPMSSYLENELEKRFNLLRFWTSPEKSVLLETHRNSIRAVVGNASAGADAQ 60

Query: 61 LIDALP 66
          LI  LP
Sbjct: 61 LISDLP 66


>AT1G79870.2 | Symbols:  | D-isomer specific 2-hydroxyacid
          dehydrogenase family protein | chr1:30044794-30045851
          FORWARD LENGTH=294
          Length = 294

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 49/66 (74%)

Query: 1  MGSIGVLLVCQVMPYLEQELDKRFKLFREWDYPQKAQLLTNHAASIRAVVGNASAGADAE 60
          M SIGVL++C +  YLE EL+KRF L R W  P+K+ LL  H  SIRAVVGNASAGADA+
Sbjct: 1  MESIGVLMMCPMSSYLENELEKRFNLLRFWTSPEKSVLLETHRNSIRAVVGNASAGADAQ 60

Query: 61 LIDALP 66
          LI  LP
Sbjct: 61 LISDLP 66