Miyakogusa Predicted Gene
- Lj0g3v0333789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0333789.1 Non Chatacterized Hit- tr|J3MHY1|J3MHY1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,33.47,0.000000000000002,seg,NULL,CUFF.22768.1
(497 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37960.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 285 7e-77
AT2G37960.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 285 7e-77
AT3G54060.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 218 8e-57
AT3G54060.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 217 1e-56
>AT2G37960.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G54060.2);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr2:15886962-15889180
REVERSE LENGTH=480
Length = 480
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 192/493 (38%), Positives = 273/493 (55%), Gaps = 54/493 (10%)
Query: 13 FGKGKVTPIQVAFIVDRYLCDNNFTETRSAFRNEASSLIANSPINQVPKSLLSLGEMLNE 72
G G+VTPIQVAF+VDRYLCDN F++TRS FR+EASSLI+NSP+ +VP SLL L E+LNE
Sbjct: 14 IGNGEVTPIQVAFLVDRYLCDNRFSKTRSLFRSEASSLISNSPVREVPNSLLPLNEILNE 73
Query: 73 YICLKEQKVMVDRERVLVEQEKNRVQMLLQGMHNVMNAYNASRSNAAPNVHVMNAKS--- 129
YI LK++K+++D+E+ ++QEK RVQ LL GM +VMNAYN+S + A P V+ + +
Sbjct: 74 YIRLKKEKIVMDQEKSKLDQEKTRVQNLLNGMQDVMNAYNSSTAAAPPPPPVITSAAPMD 133
Query: 130 -AVVPQPKLQNGXXXXXXXXXXXXXXXXXXIHSLPPSINTNPETGNFSTPIVSVSSRKRK 188
VV QN + SLP N GNF+ P ++ S K++
Sbjct: 134 KQVVASTSKQNNFGVSSSGCTVYNTQNAMTV-SLP----GNKRVGNFTGPCITQSITKKR 188
Query: 189 DTNTVDVPXXXXXXXXXXXXXXIPVKGKKPLLQSTS-VNNQAVSQLSCPTQSSAGNCIXX 247
+ V V + KG K + Q+ + + Q S++ P +
Sbjct: 189 KSPEVSV-----------GAPSVSRKGMKKIPQAANYLTFQTPSEMQTPLNNGVA---TN 234
Query: 248 XXXXXXXXXXKCLFNHPALTIPTNSPVPKTPPRSNSCHSDTNISPTEISSVATCNGEATP 307
KCLF+ + P+NS P+TP + S SD E TP
Sbjct: 235 ESSDLTSSVAKCLFDKSGTSPPSNSTCPRTPQQKVSPQSD---------------KEVTP 279
Query: 308 TCYSVVSTKRVLVSPAKQMA--YIESSHCI---SPVKAVNSDKVSKRDHVRSRLDFDASD 362
T ++V+ +R+ VSP KQ+A +E SH + SPVK+ N SKRDHV+ RL+FD ++
Sbjct: 280 TNCTIVTKERITVSPLKQIASYTVERSHTVSSFSPVKS-NLKMSSKRDHVKGRLNFDDTE 338
Query: 363 MPESLDKSSPNEM---STSESDKELDLFDIDFSNLDALGMDFSFTEMLNDLEIPCEGIDF 419
LD + +M S+S S+ E DLFDIDFSN+D L DFSF+E+L D +I CE +
Sbjct: 339 ATMHLDAPATVDMVSTSSSGSEAEADLFDIDFSNIDLLSEDFSFSELLFDFDIGCEEMSN 398
Query: 420 SDNPA-SSHSKDNPSGSSHECK-----ANQVISGLSSTKAEVLSEKDMNTLGPDCLTTMN 473
P S+ + SGSS E + +QV+S +ST E++ KDMNT G D +TT+
Sbjct: 399 HSLPQPSNFHIETASGSSPESRNTNLEPDQVVSEYTSTVTEMIQGKDMNTQGSDSMTTVK 458
Query: 474 TVTKCIKTISPVK 486
++TKC++ +SP K
Sbjct: 459 SITKCLRILSPAK 471
>AT2G37960.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G54060.2); Has 418 Blast hits to 247 proteins
in 92 species: Archae - 0; Bacteria - 163; Metazoa - 49;
Fungi - 80; Plants - 28; Viruses - 0; Other Eukaryotes -
98 (source: NCBI BLink). | chr2:15886962-15889180
REVERSE LENGTH=480
Length = 480
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 192/493 (38%), Positives = 273/493 (55%), Gaps = 54/493 (10%)
Query: 13 FGKGKVTPIQVAFIVDRYLCDNNFTETRSAFRNEASSLIANSPINQVPKSLLSLGEMLNE 72
G G+VTPIQVAF+VDRYLCDN F++TRS FR+EASSLI+NSP+ +VP SLL L E+LNE
Sbjct: 14 IGNGEVTPIQVAFLVDRYLCDNRFSKTRSLFRSEASSLISNSPVREVPNSLLPLNEILNE 73
Query: 73 YICLKEQKVMVDRERVLVEQEKNRVQMLLQGMHNVMNAYNASRSNAAPNVHVMNAKS--- 129
YI LK++K+++D+E+ ++QEK RVQ LL GM +VMNAYN+S + A P V+ + +
Sbjct: 74 YIRLKKEKIVMDQEKSKLDQEKTRVQNLLNGMQDVMNAYNSSTAAAPPPPPVITSAAPMD 133
Query: 130 -AVVPQPKLQNGXXXXXXXXXXXXXXXXXXIHSLPPSINTNPETGNFSTPIVSVSSRKRK 188
VV QN + SLP N GNF+ P ++ S K++
Sbjct: 134 KQVVASTSKQNNFGVSSSGCTVYNTQNAMTV-SLP----GNKRVGNFTGPCITQSITKKR 188
Query: 189 DTNTVDVPXXXXXXXXXXXXXXIPVKGKKPLLQSTS-VNNQAVSQLSCPTQSSAGNCIXX 247
+ V V + KG K + Q+ + + Q S++ P +
Sbjct: 189 KSPEVSV-----------GAPSVSRKGMKKIPQAANYLTFQTPSEMQTPLNNGVA---TN 234
Query: 248 XXXXXXXXXXKCLFNHPALTIPTNSPVPKTPPRSNSCHSDTNISPTEISSVATCNGEATP 307
KCLF+ + P+NS P+TP + S SD E TP
Sbjct: 235 ESSDLTSSVAKCLFDKSGTSPPSNSTCPRTPQQKVSPQSD---------------KEVTP 279
Query: 308 TCYSVVSTKRVLVSPAKQMA--YIESSHCI---SPVKAVNSDKVSKRDHVRSRLDFDASD 362
T ++V+ +R+ VSP KQ+A +E SH + SPVK+ N SKRDHV+ RL+FD ++
Sbjct: 280 TNCTIVTKERITVSPLKQIASYTVERSHTVSSFSPVKS-NLKMSSKRDHVKGRLNFDDTE 338
Query: 363 MPESLDKSSPNEM---STSESDKELDLFDIDFSNLDALGMDFSFTEMLNDLEIPCEGIDF 419
LD + +M S+S S+ E DLFDIDFSN+D L DFSF+E+L D +I CE +
Sbjct: 339 ATMHLDAPATVDMVSTSSSGSEAEADLFDIDFSNIDLLSEDFSFSELLFDFDIGCEEMSN 398
Query: 420 SDNPA-SSHSKDNPSGSSHECK-----ANQVISGLSSTKAEVLSEKDMNTLGPDCLTTMN 473
P S+ + SGSS E + +QV+S +ST E++ KDMNT G D +TT+
Sbjct: 399 HSLPQPSNFHIETASGSSPESRNTNLEPDQVVSEYTSTVTEMIQGKDMNTQGSDSMTTVK 458
Query: 474 TVTKCIKTISPVK 486
++TKC++ +SP K
Sbjct: 459 SITKCLRILSPAK 471
>AT3G54060.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G37960.2); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr3:20018902-20020826 REVERSE LENGTH=442
Length = 442
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 231/436 (52%), Gaps = 68/436 (15%)
Query: 1 MVKQSKPRKPDSFGKGKVTPIQVAFIVDRYLCDNNFTETRSAFRNEASSLIANSPINQVP 60
M K S+ + + GKG+VTP QVAFIVDRYL DN F+ETR+ FR+EASSLI++SPI VP
Sbjct: 1 MGKSSRSKGSNLIGKGEVTPTQVAFIVDRYLHDNRFSETRALFRSEASSLISDSPIRNVP 60
Query: 61 KSLLSLGEMLNEYICLKEQKVMVDRERVLVEQEKNRVQMLLQGMHNVMNAYNASRSNAAP 120
SL++L MLN Y+ LK+QKV +D+E++ ++QEK RVQ LLQGM NVMN YNAS + P
Sbjct: 61 NSLMTLDAMLNHYVSLKKQKVSLDQEKLKLDQEKIRVQNLLQGMENVMNTYNASLTAPPP 120
Query: 121 NVHVMNAKSAVVPQPKLQNGXXXXXXXXXXXXXXXXXXIHSLPPSI--NTNPETGNFSTP 178
A P + +N ++ + S+ N + GNFSTP
Sbjct: 121 ---------ASAPTSQQKN------HSISSSGLSQYNTLNGMSVSLLGNKRVDFGNFSTP 165
Query: 179 IVS--VSSRKRKDTNTVDVPXXXXXXXXXXXXXXIPVKGKKPLLQSTSVN-----NQAVS 231
S ++ +++ +V P PV K + ++T N ++A +
Sbjct: 166 STSQSITGKRKGPEVSVTAP---------------PVSRKSRITRATGTNKLPQADKAAN 210
Query: 232 QLSCPTQSSAGNCIXXXXXXXXXXXXKCLFNHPALTIPTNSPVPKTPPRSNSCHSDTNIS 291
+ T + A N KCLFN ++PT+S +TP + +
Sbjct: 211 NFTSETLAVAKNSASNELIGNGSSVVKCLFNKADSSVPTSSTCFRTPQKH---------A 261
Query: 292 PTEISSVATCNGEATPT---CYSVVSTKRVLVSPAKQM-AY-IESSHCIS---PVKAVNS 343
+ + E TPT C ++V+ +R +SP KQ+ +Y +E SH IS PVK+ N
Sbjct: 262 SSGSDKSNSSQKEVTPTNTNC-TIVTKERFTISPLKQITSYSVERSHLISFSSPVKS-NL 319
Query: 344 DKVSKRDHVRSRLDFDASDMPESLDKSSPNEM---STSESDKELDLFDIDFSNLDALGMD 400
+KRDHV+ +L+FD +D L+ + ++ S S S+ E+DLFD+DFSNLD
Sbjct: 320 KMSNKRDHVKGKLNFDDTDTETCLEAPATADLVSTSPSGSEPEVDLFDMDFSNLD----- 374
Query: 401 FSFTEMLNDLEIPCEG 416
F+E+L D ++ CEG
Sbjct: 375 --FSELLVDFDLGCEG 388
>AT3G54060.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G37960.2); Has 455 Blast hits to 322 proteins
in 98 species: Archae - 0; Bacteria - 178; Metazoa - 88;
Fungi - 75; Plants - 28; Viruses - 2; Other Eukaryotes -
84 (source: NCBI BLink). | chr3:20018915-20020826
REVERSE LENGTH=456
Length = 456
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 231/436 (52%), Gaps = 68/436 (15%)
Query: 1 MVKQSKPRKPDSFGKGKVTPIQVAFIVDRYLCDNNFTETRSAFRNEASSLIANSPINQVP 60
M K S+ + + GKG+VTP QVAFIVDRYL DN F+ETR+ FR+EASSLI++SPI VP
Sbjct: 1 MGKSSRSKGSNLIGKGEVTPTQVAFIVDRYLHDNRFSETRALFRSEASSLISDSPIRNVP 60
Query: 61 KSLLSLGEMLNEYICLKEQKVMVDRERVLVEQEKNRVQMLLQGMHNVMNAYNASRSNAAP 120
SL++L MLN Y+ LK+QKV +D+E++ ++QEK RVQ LLQGM NVMN YNAS + P
Sbjct: 61 NSLMTLDAMLNHYVSLKKQKVSLDQEKLKLDQEKIRVQNLLQGMENVMNTYNASLTAPPP 120
Query: 121 NVHVMNAKSAVVPQPKLQNGXXXXXXXXXXXXXXXXXXIHSLPPSI--NTNPETGNFSTP 178
A P + +N ++ + S+ N + GNFSTP
Sbjct: 121 ---------ASAPTSQQKN------HSISSSGLSQYNTLNGMSVSLLGNKRVDFGNFSTP 165
Query: 179 IVS--VSSRKRKDTNTVDVPXXXXXXXXXXXXXXIPVKGKKPLLQSTSVN-----NQAVS 231
S ++ +++ +V P PV K + ++T N ++A +
Sbjct: 166 STSQSITGKRKGPEVSVTAP---------------PVSRKSRITRATGTNKLPQADKAAN 210
Query: 232 QLSCPTQSSAGNCIXXXXXXXXXXXXKCLFNHPALTIPTNSPVPKTPPRSNSCHSDTNIS 291
+ T + A N KCLFN ++PT+S +TP + +
Sbjct: 211 NFTSETLAVAKNSASNELIGNGSSVVKCLFNKADSSVPTSSTCFRTPQKH---------A 261
Query: 292 PTEISSVATCNGEATPT---CYSVVSTKRVLVSPAKQM-AY-IESSHCIS---PVKAVNS 343
+ + E TPT C ++V+ +R +SP KQ+ +Y +E SH IS PVK+ N
Sbjct: 262 SSGSDKSNSSQKEVTPTNTNC-TIVTKERFTISPLKQITSYSVERSHLISFSSPVKS-NL 319
Query: 344 DKVSKRDHVRSRLDFDASDMPESLDKSSPNEM---STSESDKELDLFDIDFSNLDALGMD 400
+KRDHV+ +L+FD +D L+ + ++ S S S+ E+DLFD+DFSNLD
Sbjct: 320 KMSNKRDHVKGKLNFDDTDTETCLEAPATADLVSTSPSGSEPEVDLFDMDFSNLD----- 374
Query: 401 FSFTEMLNDLEIPCEG 416
F+E+L D ++ CEG
Sbjct: 375 --FSELLVDFDLGCEG 388