Miyakogusa Predicted Gene

Lj0g3v0333019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0333019.1 Non Chatacterized Hit- tr|I3S9Q1|I3S9Q1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,98.21,0,Ribosomal_L7Ae,Ribosomal protein L7Ae/L30e/S12e/Gadd45;
Ribosomal_L30e,Ribosomal protein L30e; L30e-,CUFF.22710.1
         (112 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G36240.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   207   1e-54
AT3G18740.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   205   5e-54
AT1G77940.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   203   1e-53

>AT1G36240.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr1:13614890-13616233 FORWARD
           LENGTH=112
          Length = 112

 Score =  207 bits (527), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/112 (87%), Positives = 108/112 (96%)

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPSDQ 112
           EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+DPGDSDIIK+LP DQ
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112


>AT3G18740.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr3:6453437-6453870 FORWARD LENGTH=112
          Length = 112

 Score =  205 bits (522), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 97/112 (86%), Positives = 106/112 (94%)

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
           MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPSDQ 112
           EYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSI+DPGDSDIIKTLP DQ
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112


>AT1G77940.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr1:29304116-29305288 REVERSE
           LENGTH=112
          Length = 112

 Score =  203 bits (517), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 95/112 (84%), Positives = 105/112 (93%)

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLKSLR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPSDQ 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGDSDIIK++P DQ
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112