Miyakogusa Predicted Gene

Lj0g3v0332909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332909.1 Non Chatacterized Hit- tr|D7T813|D7T813_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.91,0,1,4-ALPHA-GLUCAN-BRANCHING ENZYME (GLYCOGEN-BRANCHING
ENZYME)(BRANCHER ENZYME),NULL; ALPHA-AMYLASE,G,CUFF.22703.1
         (403 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20440.2 | Symbols: EMB2729, BE1 | Alpha amylase family prote...   634   0.0  
AT3G20440.1 | Symbols: EMB2729, BE1 | Alpha amylase family prote...   634   0.0  
AT3G20440.3 | Symbols: EMB2729 | Alpha amylase family protein | ...   608   e-174
AT5G03650.1 | Symbols: SBE2.2 | starch branching enzyme 2.2 | ch...   296   2e-80
AT2G36390.1 | Symbols: SBE2.1, BE3 | starch branching enzyme 2.1...   288   4e-78

>AT3G20440.2 | Symbols: EMB2729, BE1 | Alpha amylase family protein
           | chr3:7123603-7130364 REVERSE LENGTH=899
          Length = 899

 Score =  634 bits (1636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/403 (73%), Positives = 349/403 (86%), Gaps = 1/403 (0%)

Query: 1   MVGLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQF 60
           MVGLS+FDGSNDCYFH GKRG HK WGTRMFKYGD DVLHFL+SNLNWW+ EYQ+DG+QF
Sbjct: 498 MVGLSLFDGSNDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLISNLNWWITEYQVDGYQF 557

Query: 61  HSISSMIYTHNGFASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYY 120
           HS++SMIYTHNGFASF  DL++YCNQYVD+DAL+YLILAN+ILH  +PNI+TIAEDA+YY
Sbjct: 558 HSLASMIYTHNGFASFNNDLDDYCNQYVDRDALMYLILANEILHVQHPNIITIAEDATYY 617

Query: 121 PGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMY 180
           PGLCEP  QGGLGFDYYVNLS SEMW + L++VPD+EWSM+KIV+TL++NK+YADKML Y
Sbjct: 618 PGLCEPVSQGGLGFDYYVNLSASEMWVSLLDNVPDNEWSMSKIVSTLVANKEYADKMLSY 677

Query: 181 AENHNQSISGRRSFAEILFGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRAYLNFMG 240
           AENHNQSISG RSFAEILFG +D  S   KE L RG SLHKMIRLIT   GGRAYLNFMG
Sbjct: 678 AENHNQSISGGRSFAEILFGGVDNGSPGGKELLDRGISLHKMIRLITFTSGGRAYLNFMG 737

Query: 241 NEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGVYRDLFTFDKDMMKLDENARVLSRGF 300
           NEFGHP+RVEFPT SN+ SF LANR+WDLL + GV+  LF+FDK++M LD++  +LSRG 
Sbjct: 738 NEFGHPERVEFPTQSNNFSFSLANRRWDLL-ESGVHHHLFSFDKELMDLDKSKGILSRGL 796

Query: 301 PNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEAGEYQIILNTDDIKYAGQG 360
           P+IHHVND +MVIS+ RGP LFIFNFHP+NSY+ Y VGV+EAGEY +ILN+D++KY GQG
Sbjct: 797 PSIHHVNDANMVISFSRGPFLFIFNFHPSNSYEKYDVGVEEAGEYTMILNSDEVKYGGQG 856

Query: 361 SLKEDQYYKKTISRRVDGLRNCLVVSLPSRTAQVYKLKRILRI 403
            + ED Y +++IS+R+DG RNCL V LPSRTAQVYKL RILRI
Sbjct: 857 IVTEDHYLQRSISKRIDGQRNCLEVFLPSRTAQVYKLTRILRI 899


>AT3G20440.1 | Symbols: EMB2729, BE1 | Alpha amylase family protein
           | chr3:7123603-7130364 REVERSE LENGTH=869
          Length = 869

 Score =  634 bits (1636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/403 (73%), Positives = 349/403 (86%), Gaps = 1/403 (0%)

Query: 1   MVGLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQF 60
           MVGLS+FDGSNDCYFH GKRG HK WGTRMFKYGD DVLHFL+SNLNWW+ EYQ+DG+QF
Sbjct: 468 MVGLSLFDGSNDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLISNLNWWITEYQVDGYQF 527

Query: 61  HSISSMIYTHNGFASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYY 120
           HS++SMIYTHNGFASF  DL++YCNQYVD+DAL+YLILAN+ILH  +PNI+TIAEDA+YY
Sbjct: 528 HSLASMIYTHNGFASFNNDLDDYCNQYVDRDALMYLILANEILHVQHPNIITIAEDATYY 587

Query: 121 PGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMY 180
           PGLCEP  QGGLGFDYYVNLS SEMW + L++VPD+EWSM+KIV+TL++NK+YADKML Y
Sbjct: 588 PGLCEPVSQGGLGFDYYVNLSASEMWVSLLDNVPDNEWSMSKIVSTLVANKEYADKMLSY 647

Query: 181 AENHNQSISGRRSFAEILFGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRAYLNFMG 240
           AENHNQSISG RSFAEILFG +D  S   KE L RG SLHKMIRLIT   GGRAYLNFMG
Sbjct: 648 AENHNQSISGGRSFAEILFGGVDNGSPGGKELLDRGISLHKMIRLITFTSGGRAYLNFMG 707

Query: 241 NEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGVYRDLFTFDKDMMKLDENARVLSRGF 300
           NEFGHP+RVEFPT SN+ SF LANR+WDLL + GV+  LF+FDK++M LD++  +LSRG 
Sbjct: 708 NEFGHPERVEFPTQSNNFSFSLANRRWDLL-ESGVHHHLFSFDKELMDLDKSKGILSRGL 766

Query: 301 PNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEAGEYQIILNTDDIKYAGQG 360
           P+IHHVND +MVIS+ RGP LFIFNFHP+NSY+ Y VGV+EAGEY +ILN+D++KY GQG
Sbjct: 767 PSIHHVNDANMVISFSRGPFLFIFNFHPSNSYEKYDVGVEEAGEYTMILNSDEVKYGGQG 826

Query: 361 SLKEDQYYKKTISRRVDGLRNCLVVSLPSRTAQVYKLKRILRI 403
            + ED Y +++IS+R+DG RNCL V LPSRTAQVYKL RILRI
Sbjct: 827 IVTEDHYLQRSISKRIDGQRNCLEVFLPSRTAQVYKLTRILRI 869


>AT3G20440.3 | Symbols: EMB2729 | Alpha amylase family protein |
           chr3:7123603-7130364 REVERSE LENGTH=897
          Length = 897

 Score =  608 bits (1568), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 289/405 (71%), Positives = 342/405 (84%), Gaps = 12/405 (2%)

Query: 1   MVGLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQF 60
           MVGLS+FDGSNDCYFH GKRG HK WGTRMFKYGD DVLHFL+SNLNWW+ EYQ+DG+QF
Sbjct: 503 MVGLSLFDGSNDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLISNLNWWITEYQVDGYQF 562

Query: 61  HSISSMIYTHNGFASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYY 120
           HS++SMIYTHNGFASF  DL++YCNQYVD+DAL+YLILAN+ILH  +PNI+TIAEDA+YY
Sbjct: 563 HSLASMIYTHNGFASFNNDLDDYCNQYVDRDALMYLILANEILHVQHPNIITIAEDATYY 622

Query: 121 PGLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMY 180
           PGLCEP  QGGLGFDYYVNLS SEMW + L++VPD+EWSM+KIV+TL++NK+YADKML Y
Sbjct: 623 PGLCEPVSQGGLGFDYYVNLSASEMWVSLLDNVPDNEWSMSKIVSTLVANKEYADKMLSY 682

Query: 181 AENHNQSISGRRSFAEILFGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRAYLNFMG 240
           AENHNQSISG RSFAEILFG +D  S   KE L RG SLHKMIRLIT   GGRAYLNFMG
Sbjct: 683 AENHNQSISGGRSFAEILFGGVDNGSPGGKELLDRGISLHKMIRLITFTSGGRAYLNFMG 742

Query: 241 NEFGHPKRVEFPTSSNDNSFLLANRQWDLLAKDGVYRDLFTFDK--DMMKLDENARVLSR 298
           NEFGHP+RVEFPT SN+ SF LANR+WDLL + GV+  LF+FDK  ++M LD++  +LSR
Sbjct: 743 NEFGHPERVEFPTQSNNFSFSLANRRWDLL-ESGVHHHLFSFDKVSELMDLDKSKGILSR 801

Query: 299 GFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEAGEYQIILNTDDIKYAG 358
           G P+IHHVND +MVIS+ RGP LFIFNFHP+NSY+ Y VGV+EAGEY +ILN+D++KY G
Sbjct: 802 GLPSIHHVNDANMVISFSRGPFLFIFNFHPSNSYEKYDVGVEEAGEYTMILNSDEVKYGG 861

Query: 359 QGSLKEDQYYKKTISRRVDGLRNCLVVSLPSRTAQVYKLKRILRI 403
           QG + ED Y +++IS+R+DG RNCL         +VYKL RILRI
Sbjct: 862 QGIVTEDHYLQRSISKRIDGQRNCL---------EVYKLTRILRI 897


>AT5G03650.1 | Symbols: SBE2.2 | starch branching enzyme 2.2 |
           chr5:931924-937470 FORWARD LENGTH=805
          Length = 805

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 170/420 (40%), Positives = 251/420 (59%), Gaps = 36/420 (8%)

Query: 3   GLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQFHS 62
           GL+MFDG++  YFHSG RG H  W +R+F YG  +VL +LLSN  WW+ EY+ DGF+F  
Sbjct: 393 GLNMFDGTDAHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDG 452

Query: 63  ISSMIYTHNGFA-SFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYYP 121
           ++SM+YTH+G +  FTG+  EY     D DA+ YL+L ND++H  YP  +T+ ED S  P
Sbjct: 453 VTSMMYTHHGLSVGFTGNYTEYFGLETDVDAVNYLMLVNDMIHGLYPEAITVGEDVSGMP 512

Query: 122 GLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMYA 181
             C P   GG+GFDY +++++++ W   L+   D +W M  I+ TL +N+ +++K + YA
Sbjct: 513 TFCIPVQDGGVGFDYRLHMAIADKWIEMLKKR-DEDWQMGDIIYTL-TNRRWSEKCISYA 570

Query: 182 ENHNQSISGRRSFAEIL-------FGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRA 234
           E+H+Q++ G ++ A  L       F  +D  S      + RG +LHKMIRLIT+ +GG  
Sbjct: 571 ESHDQALVGDKTIAFWLMDKDMYDFMAVDRPS---TPLIDRGIALHKMIRLITMGLGGEG 627

Query: 235 YLNFMGNEFGHPKRVEFPTSS---NDNSFLLAN--------RQWDLLAKDGV-YRDLFTF 282
           YLNFMGNEFGHP+ ++FP      +D S +  N        R++DL   D + YR L  F
Sbjct: 628 YLNFMGNEFGHPEWIDFPRGEQRLSDGSVIPGNNFSYDKCRRRFDLGDADYLRYRGLQEF 687

Query: 283 DKDMMKLDENARVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEA 342
           D+ M  L+EN   ++     I   ++   VI + RG L+F+FNFH T+SY  Y +G  + 
Sbjct: 688 DQAMQHLEENYGFMTSEHQFISRKDEADRVIVFERGDLVFVFNFHWTSSYFDYRIGCSKP 747

Query: 343 GEYQIILNTDDIKYAGQGSL-KEDQYYKKTISRRVDGL---RNC-LVVSLPSRTAQVYKL 397
           G+Y+I+L++DD  + G   L ++ +Y+        DGL   R C  +V  P RTA VY L
Sbjct: 748 GKYKIVLDSDDPLFGGFNRLDRKAEYFT------YDGLYDERPCSFMVYAPCRTAVVYAL 801


>AT2G36390.1 | Symbols: SBE2.1, BE3 | starch branching enzyme 2.1 |
           chr2:15264283-15269940 FORWARD LENGTH=858
          Length = 858

 Score =  288 bits (738), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 159/410 (38%), Positives = 238/410 (58%), Gaps = 28/410 (6%)

Query: 3   GLSMFDGSNDCYFHSGKRGQHKFWGTRMFKYGDPDVLHFLLSNLNWWVVEYQIDGFQFHS 62
           GL MFDG++  YFHSG RG H  W +R+F YG  +VL +LLSN  WW+ EY+ DGF+F  
Sbjct: 428 GLDMFDGTDGQYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDG 487

Query: 63  ISSMIYTHNGF-ASFTGDLEEYCNQYVDKDALLYLILANDILHFFYPNIVTIAEDASYYP 121
           ++SM+YTH+G    FTG+  EY     D DA++YL+L ND++H  YP  + + ED S  P
Sbjct: 488 VTSMMYTHHGLQVEFTGNYNEYFGYSTDVDAVVYLMLVNDLIHGLYPEAIVVGEDVSGMP 547

Query: 122 GLCEPTFQGGLGFDYYVNLSVSEMWSTFLESVPDHEWSMTKIVNTLISNKDYADKMLMYA 181
             C P   GG+GFDY ++++V++ W   L+   D +W +  I  TL +N+ + +K ++YA
Sbjct: 548 AFCVPVEDGGVGFDYRLHMAVADKWIELLKKR-DEDWQVGDITFTL-TNRRWGEKCVVYA 605

Query: 182 ENHNQSISGRRSFAEIL-------FGEIDEHSDHYKESLLRGSSLHKMIRLITLAIGGRA 234
           E+H+Q++ G ++ A  L       F  +D  +      + RG +LHKMIRLIT+ +GG  
Sbjct: 606 ESHDQALVGDKTIAFWLMDKDMYDFMAVDRQA---TPRVDRGIALHKMIRLITMGLGGEG 662

Query: 235 YLNFMGNEFGHPKRVEFP-----------TSSNDNSFLLANRQWDLLAKDGV-YRDLFTF 282
           YLNFMGNEFGHP+ ++FP            + N+ S+    R++DL   + + Y  L  F
Sbjct: 663 YLNFMGNEFGHPEWIDFPRTDQHLPDGRVIAGNNGSYDKCRRRFDLGDAEYLRYHGLQEF 722

Query: 283 DKDMMKLDENARVLSRGFPNIHHVNDNSMVISYIRGPLLFIFNFHPTNSYDSYSVGVDEA 342
           D+ M  L+E    ++     I   ++   VI + RG LLF+FNFH TNSY  Y +G    
Sbjct: 723 DRAMQNLEETYGFMTSEHQYISRKDEGDRVIVFERGNLLFVFNFHWTNSYSDYRIGCSVP 782

Query: 343 GEYQIILNTDDIKYAGQGSLKEDQYYKKTISRRVDGLRNC-LVVSLPSRT 391
           G+Y+I+L++D+  + G   L +   +  +  R  D  R C  +V  P RT
Sbjct: 783 GKYKIVLDSDNSLFGGFNRLDDSAEFFTSDGRHDD--RPCSFMVYAPCRT 830