Miyakogusa Predicted Gene

Lj0g3v0332629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332629.1 Non Chatacterized Hit- tr|I1MEF2|I1MEF2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.86,0,DUF382,Domain
of unknown function DUF382; PSP,PSP, proline-rich; seg,NULL; SUBFAMILY
NOT NAMED,NULL;,CUFF.22686.1
         (559 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21660.1 | Symbols:  | proline-rich spliceosome-associated (P...   642   0.0  
AT4G21660.2 | Symbols:  | proline-rich spliceosome-associated (P...   632   0.0  
AT1G11520.1 | Symbols:  | pliceosome associated protein-related ...   131   1e-30

>AT4G21660.1 | Symbols:  | proline-rich spliceosome-associated (PSP)
           family protein | chr4:11506259-11509772 REVERSE
           LENGTH=584
          Length = 584

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/507 (64%), Positives = 380/507 (74%), Gaps = 19/507 (3%)

Query: 41  TAKDNNENTDPK-QVAEQV--EYVWEKSELDEGMDEQFRRIIEKFSF---IAGSEDTYKN 94
            A ++ ENTDP+ QV EQ+  EYV E++E ++G +++F+ I EKF+F   +A  ED  K+
Sbjct: 61  AASESKENTDPQPQVCEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPLASEEDGTKD 120

Query: 95  XXXXXXXXXXXXXXXXNDXXXXXXXXX-----XXXXXXLQQRMKIAQLKQICSRPDVVEV 149
                           +                     LQ+RMKIA+LKQ+ +RPDVVEV
Sbjct: 121 ESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRMKIAELKQVSARPDVVEV 180

Query: 150 WDATALDPKLLVFFKSYRNTVPVPRHWSQKRNFLQGKRGIQKQPFQLPHFIAATGIEKIR 209
           WDAT+ DPKLLVF KSYRNTVPVPRHWSQKR +LQGKRGI+KQPF LP FIAATGIEKIR
Sbjct: 181 WDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGKRGIEKQPFHLPDFIAATGIEKIR 240

Query: 210 QAYIDKEDGKKLKQKQRERMQPKMGKMDIDYRVLHDAFFKYQTKPKLTSLGELYHEGREF 269
           QAYI+KEDGKKLKQKQRERMQPKMGKMDIDY+VLHDAFFKYQTKPKL++LG+LY EG+EF
Sbjct: 241 QAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSALGDLYFEGKEF 300

Query: 270 EVKLREMKPGMLSHELKEALGMPEGAPSPWLINMQRYGPPPSYPSLKIPGLNSPIPPGAS 329
           EVKLRE KPG LS++LKEALGMPEGAP PWLINMQRYGPPPSYP LKIPGLN+PIP GAS
Sbjct: 301 EVKLRETKPGFLSNDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPIGAS 360

Query: 330 FGYHAGGWGKPPVDEYGRALYGDVFGVQQQEHPNYEEEPVDKTKHWGDLXXXXXXXXXXX 389
           FG+HAGGWGKPPVDEYGR LYGDVFGVQQQ+ PNYEEEP+DK+KHWGDL           
Sbjct: 361 FGFHAGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHWGDLEEEEEEEEEEE 420

Query: 390 XXXXXXXXXXXXXXXXAGIQSVDSISSAPTGVETPDVIDLRKQQRKEPKEPVRPLYLVLE 449
                            G +SVD++SS PTG+ETPD I+LRK QRKEP    R LY VLE
Sbjct: 421 EEQEEEMDEEELED---GTESVDTLSSTPTGIETPDAIELRKDQRKEPD---RALYQVLE 474

Query: 450 EKEEKIAPGTFLGTTHTYAVGTGGTQDKSGAKRVDLLKGQKSDKVDVTIQPEELETMDND 509
           EK E +APGT LGT+HTY + T GTQ+K+GAKRVDLL+GQK+D+VDV++QPEEL+ M+N 
Sbjct: 475 EKGESVAPGTLLGTSHTYVIKT-GTQEKTGAKRVDLLRGQKTDRVDVSLQPEELDAMEN- 532

Query: 510 ALHAKYVEAREEENSRSHHEDFSQMVA 536
            L AKY EAREEE  R+   D S MV 
Sbjct: 533 VLPAKYEEAREEEKLRNKPVDLSDMVV 559


>AT4G21660.2 | Symbols:  | proline-rich spliceosome-associated (PSP)
           family protein | chr4:11506259-11509772 REVERSE
           LENGTH=598
          Length = 598

 Score =  632 bits (1630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/521 (62%), Positives = 380/521 (72%), Gaps = 33/521 (6%)

Query: 41  TAKDNNENTDPK-QVAEQV--EYVWEKSELDEGMDEQFRRIIEKFSF---IAGSEDTYKN 94
            A ++ ENTDP+ QV EQ+  EYV E++E ++G +++F+ I EKF+F   +A  ED  K+
Sbjct: 61  AASESKENTDPQPQVCEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPLASEEDGTKD 120

Query: 95  XXXXXXXXXXXXXXXXNDXXXXXXXXX-----XXXXXXLQQRMKIAQLKQICSRPDVVEV 149
                           +                     LQ+RMKIA+LKQ+ +RPDVVEV
Sbjct: 121 ESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRMKIAELKQVSARPDVVEV 180

Query: 150 WDATALDPKLLVFFKSYRNTVPVPRHWSQKRNFLQG--------------KRGIQKQPFQ 195
           WDAT+ DPKLLVF KSYRNTVPVPRHWSQKR +LQG              KRGI+KQPF 
Sbjct: 181 WDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGNYIKRDRNVCDNHGKRGIEKQPFH 240

Query: 196 LPHFIAATGIEKIRQAYIDKEDGKKLKQKQRERMQPKMGKMDIDYRVLHDAFFKYQTKPK 255
           LP FIAATGIEKIRQAYI+KEDGKKLKQKQRERMQPKMGKMDIDY+VLHDAFFKYQTKPK
Sbjct: 241 LPDFIAATGIEKIRQAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPK 300

Query: 256 LTSLGELYHEGREFEVKLREMKPGMLSHELKEALGMPEGAPSPWLINMQRYGPPPSYPSL 315
           L++LG+LY EG+EFEVKLRE KPG LS++LKEALGMPEGAP PWLINMQRYGPPPSYP L
Sbjct: 301 LSALGDLYFEGKEFEVKLRETKPGFLSNDLKEALGMPEGAPPPWLINMQRYGPPPSYPHL 360

Query: 316 KIPGLNSPIPPGASFGYHAGGWGKPPVDEYGRALYGDVFGVQQQEHPNYEEEPVDKTKHW 375
           KIPGLN+PIP GASFG+HAGGWGKPPVDEYGR LYGDVFGVQQQ+ PNYEEEP+DK+KHW
Sbjct: 361 KIPGLNAPIPIGASFGFHAGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHW 420

Query: 376 GDLXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIQSVDSISSAPTGVETPDVIDLRKQQRK 435
           GDL                            G +SVD++SS PTG+ETPD I+LRK QRK
Sbjct: 421 GDLEEEEEEEEEEEEEQEEEMDEEELED---GTESVDTLSSTPTGIETPDAIELRKDQRK 477

Query: 436 EPKEPVRPLYLVLEEKEEKIAPGTFLGTTHTYAVGTGGTQDKSGAKRVDLLKGQKSDKVD 495
           EP    R LY VLEEK E +APGT LGT+HTY + T GTQ+K+GAKRVDLL+GQK+D+VD
Sbjct: 478 EPD---RALYQVLEEKGESVAPGTLLGTSHTYVIKT-GTQEKTGAKRVDLLRGQKTDRVD 533

Query: 496 VTIQPEELETMDNDALHAKYVEAREEENSRSHHEDFSQMVA 536
           V++QPEEL+ M+N  L AKY EAREEE  R+   D S MV 
Sbjct: 534 VSLQPEELDAMEN-VLPAKYEEAREEEKLRNKPVDLSDMVV 573


>AT1G11520.1 | Symbols:  | pliceosome associated protein-related |
           chr1:3873029-3873619 FORWARD LENGTH=196
          Length = 196

 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 11/121 (9%)

Query: 406 AGIQSVD---SISSAPTGVETPDVIDLRKQQRKEPKEPVRPLYLVLEEK-EEKIAPGTFL 461
           A + ++D   S+SS PTG+ETPD I+LRK+QRKEP    R LY VLEEK E  +APGT L
Sbjct: 82  ADVDAMDVSKSLSSTPTGIETPDAIELRKEQRKEPD---RALYQVLEEKGESVVAPGTLL 138

Query: 462 GTTHTYAVGTGGTQDKSGAKRVDLLKGQKSDKVDVTIQPEELETMDNDALHAKYVEAREE 521
            TTHTY + TG TQDK+G KRVDLL+GQK+D+VD ++QPEEL+ M N     +Y EAREE
Sbjct: 139 RTTHTYVIKTG-TQDKTGTKRVDLLRGQKTDRVDFSLQPEELDAMGN---VLQYEEAREE 194

Query: 522 E 522
           E
Sbjct: 195 E 195