Miyakogusa Predicted Gene
- Lj0g3v0332349.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0332349.1 tr|I1K037|I1K037_SOYBN Histone deacetylase
OS=Glycine max PE=3 SV=1,86.76,0,Arginase/deacetylase,NULL;
HISDACETLASE,Histone deacetylase; HDASUPER,Histone deacetylase
superfamil,gene.g25944.t1.1
(355 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | h... 567 e-162
AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |... 493 e-140
AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone ... 492 e-139
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | chr... 431 e-121
AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 | chr5:137701... 422 e-118
AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase... 102 6e-22
AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase... 96 4e-20
AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 | chr5:2456... 91 9e-19
AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 90 2e-18
AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 90 2e-18
AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of t... 88 1e-17
AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |... 85 9e-17
AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 | chr5:90993... 80 2e-15
AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 | chr3:160... 67 2e-11
>AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
histone deacetylase 6 | chr5:25315834-25318227 REVERSE
LENGTH=471
Length = 471
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 263/325 (80%), Positives = 297/325 (91%)
Query: 10 EEGASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEIN 69
E G SLPSGPD +K+RV+YFYEP+IGDYYYGQGHPMKPHR+RMAH+LI++Y LHRR+EI+
Sbjct: 5 ESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEIS 64
Query: 70 RPFPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQA 129
RP A DI RFHS +YVDFLASV+PE++ +P AR L+RFNVG+DCP+FDGLF++C+A
Sbjct: 65 RPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRA 124
Query: 130 SAGGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLY 189
SAGGS+GAAVKLNR +ADIAINW GG+HHAKK EASGFCYVNDIVLGILELLK+ +RVLY
Sbjct: 125 SAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLY 184
Query: 190 IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGM 249
IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHI+D+G GK+YA+N PLNDGM
Sbjct: 185 IDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGM 244
Query: 250 DDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFN 309
DDESFR LFR +IQKVMEVYQPEAVVLQCGADSLSGDRLG FNLSVKGHADCLRF+RS+N
Sbjct: 245 DDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYN 304
Query: 310 VPLMVVGGGGYTIRNVARCWCYEVT 334
VPLMV+GGGGYTIRNVARCWCYE
Sbjct: 305 VPLMVLGGGGYTIRNVARCWCYETA 329
>AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |
histone deacetylase 1 | chr4:17896493-17899057 REVERSE
LENGTH=501
Length = 501
Score = 493 bits (1270), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/326 (71%), Positives = 280/326 (85%), Gaps = 2/326 (0%)
Query: 12 GASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRP 71
G SL SGPD K++V YFY+P +G+YYYGQGHPMKPHR+RM H L+ +Y L + M++ +P
Sbjct: 5 GNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKP 64
Query: 72 FPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASA 131
FPA D+ RFH+DDYV FL S+TPET + I RQLKRFNVG+DCP+FDGL+++CQ A
Sbjct: 65 FPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTYA 122
Query: 132 GGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYID 191
GGS+G +VKLN G DIAINWAGG+HHAKKCEASGFCYVNDIVL ILELLK H RVLY+D
Sbjct: 123 GGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVD 182
Query: 192 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDD 251
ID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+DIG GSGK+Y++N PL+DG+DD
Sbjct: 183 IDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDD 242
Query: 252 ESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVP 311
ES+ LF+ I+ KVME+++P AVVLQCGADSLSGDRLG FNLS+KGHA+C++F+RSFNVP
Sbjct: 243 ESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Query: 312 LMVVGGGGYTIRNVARCWCYEVTFFL 337
L+++GGGGYTIRNVARCWCYE L
Sbjct: 303 LLLLGGGGYTIRNVARCWCYETGVAL 328
>AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone
deacetylase 1 | chr4:17896663-17899057 REVERSE
LENGTH=469
Length = 469
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/326 (71%), Positives = 280/326 (85%), Gaps = 2/326 (0%)
Query: 12 GASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRP 71
G SL SGPD K++V YFY+P +G+YYYGQGHPMKPHR+RM H L+ +Y L + M++ +P
Sbjct: 5 GNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKP 64
Query: 72 FPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASA 131
FPA D+ RFH+DDYV FL S+TPET + I RQLKRFNVG+DCP+FDGL+++CQ A
Sbjct: 65 FPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTYA 122
Query: 132 GGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYID 191
GGS+G +VKLN G DIAINWAGG+HHAKKCEASGFCYVNDIVL ILELLK H RVLY+D
Sbjct: 123 GGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVD 182
Query: 192 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDD 251
ID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+DIG GSGK+Y++N PL+DG+DD
Sbjct: 183 IDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDD 242
Query: 252 ESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVP 311
ES+ LF+ I+ KVME+++P AVVLQCGADSLSGDRLG FNLS+KGHA+C++F+RSFNVP
Sbjct: 243 ESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVP 302
Query: 312 LMVVGGGGYTIRNVARCWCYEVTFFL 337
L+++GGGGYTIRNVARCWCYE L
Sbjct: 303 LLLLGGGGYTIRNVARCWCYETGVAL 328
>AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
chr3:16226769-16229752 REVERSE LENGTH=426
Length = 426
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/316 (63%), Positives = 249/316 (78%), Gaps = 3/316 (0%)
Query: 23 KKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDIRRF 82
K +++YFY+ +G Y+G HPMKPHR+ M H+LI+ Y LH +ME+ RP A P ++ +F
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 83 HSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGAAVKLN 142
HS DYV+FL + PE ++ +F ++ R+N+G+DCP+F+ LF +CQ AGG++ AA +LN
Sbjct: 64 HSPDYVEFLQRINPE--NQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLN 121
Query: 143 RGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEE 202
DIAINWAGG+HHAKKC+ASGFCY+ND+VLGILELLK H RVLYIDIDVHHGDGVEE
Sbjct: 122 NKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEE 181
Query: 203 AFYTTDRVMTVSFHKFGD-FFPGTGHIKDIGVGSGKHYAINCPLNDGMDDESFRGLFRTI 261
AFY TDRVMTVSFHKFGD FFPGTG +K+IG GK YAIN PL DG+DD SF LFRTI
Sbjct: 182 AFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTI 241
Query: 262 IQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVPLMVVGGGGYT 321
I KV+E+YQP A+VLQCGADSL+ DRLG FNLS+ GHA+C++FV+ FN+PL+V GGGGYT
Sbjct: 242 ISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYT 301
Query: 322 IRNVARCWCYEVTFFL 337
NVARCW E L
Sbjct: 302 KENVARCWTVETGILL 317
>AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 |
chr5:13770121-13771712 REVERSE LENGTH=409
Length = 409
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 245/325 (75%), Gaps = 8/325 (2%)
Query: 15 LPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPA 74
+ S D K+RV+YFYEP IGDYYYG P KP R+R+ HNLI+ Y+LHR MEIN P A
Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLA 60
Query: 75 GPDDIRRFHSDDYVDFLASVTPETLSEP--IFARQLKRFNVGDDC--PIFDGLFNYCQAS 130
D +FHS +Y++FL SVTPET+++P + LKRFNV D P+F LF+YC+A
Sbjct: 61 DASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY 120
Query: 131 AGGSLGAAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYI 190
AGGS+ AA KLNR EADIAINWAGGMHH KK +ASGF YVND+VL ILELLK +RVLYI
Sbjct: 121 AGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYI 180
Query: 191 DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMD 250
+I HGD VEEAF TDRVMTVSFHK GD TG I D G G G++Y++N PL DG+D
Sbjct: 181 EIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLD 236
Query: 251 DESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNV 310
D S RGLF +I + ME+Y+PE +VLQCGADSL+GD G FNLS+KGH DCL++VRSFNV
Sbjct: 237 DFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNV 296
Query: 311 PLMVVGGGGYTIRNVARCWCYEVTF 335
PLM++GGGGYT+ NVARCWCYE
Sbjct: 297 PLMILGGGGYTLPNVARCWCYETAI 321
>AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8
| chr1:2672527-2674469 FORWARD LENGTH=377
Length = 377
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 38/318 (11%)
Query: 30 YEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDIRRFHSDDYVD 89
Y+P D + HP R+R +++ + + PA ++ FH+ +Y++
Sbjct: 28 YDPGFLDVL--EKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIE 85
Query: 90 FLASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGAAVKLN------- 142
L G+ C I G F + L A L+
Sbjct: 86 KLVEADKS----------------GERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILD 129
Query: 143 -RGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVHR--RVLYIDIDVHHGDG 199
G+ A+ G HH++ +A G+C++N+ L + L RV IDIDVH+G+G
Sbjct: 130 CHGKIAYALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNG 188
Query: 200 VEEAFYTTDRVMTVSFH----KFGDFFPGTGHIKDIGVGSGKHYAINCPLNDGMDDESFR 255
E FYT+D+V+TVS H +G P G I ++G G Y +N PL +G D +
Sbjct: 189 TAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYE 248
Query: 256 GLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSFNVP---- 311
++ + + P+ VVL G DS + D G +L++ G+ + +R
Sbjct: 249 YAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHG 308
Query: 312 -LMVVGGGGYTIRNVARC 328
L++V GGY + A C
Sbjct: 309 RLLMVQEGGYHVTYAAYC 326
>AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5
| chr5:24567137-24570917 REVERSE LENGTH=660
Length = 660
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 22 KKKRVTYFYEPSI--GDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDI 79
++++V Y+ ++ D G+ HP P R+R+ + + +R + A +
Sbjct: 23 RQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHL 82
Query: 80 RRFHSDDYVDFLASVTPETLS--EPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGA 137
+ H+ D+V+ + S++ + A QL + G +AG +
Sbjct: 83 QLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNG------GSSEAAYLAAGSVVKL 136
Query: 138 AVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYI 190
A K+ GE D AI G HHA+ EA GFC N++ + LL +++L +
Sbjct: 137 AEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIV 195
Query: 191 DIDVHHGDGVEEAFYTTDRVM--TVSFHKFGDFFPG--TGHIKDIGVGSGKHYAINCPLN 246
D DVHHG+G ++ F+ RV+ +V H++G F+P G +G G G+ + IN P +
Sbjct: 196 DWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWD 255
Query: 247 DGM-DDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFV 305
G D + + I+ V + P+ + L G D+ D LG ++ G++ L+ +
Sbjct: 256 QGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKL 315
Query: 306 RSFNVPLMVVG-GGGYTIRNVAR 327
F +V+ GGY + ++A+
Sbjct: 316 MEFAQGKIVLALEGGYNLDSIAK 338
>AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 |
chr5:24567137-24570917 REVERSE LENGTH=664
Length = 664
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 28/327 (8%)
Query: 22 KKKRVTYFYEPSI--GDYYYGQGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPDDI 79
++++V Y+ ++ D G+ HP P R+R+ + + +R + A +
Sbjct: 23 RQRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHL 82
Query: 80 RRFHSDDYVDFLASVTPETLS--EPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLGA 137
+ H+ D+V+ + S++ + A QL + G +AG +
Sbjct: 83 QLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNG------GSSEAAYLAAGSVVKL 136
Query: 138 AVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVLGILELLKVH-----RRVLYI 190
A K+ GE D AI G HHA+ EA GFC N++ + LL +++L +
Sbjct: 137 AEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIV 195
Query: 191 DIDVHHGDGVEEAFYTTDRVM--TVSFHKFGDFFPG--TGHIKDIGVGSGKHYAINCPLN 246
D DVHHG+G ++ F+ RV+ +V H++G F+P G +G G G+ + IN P +
Sbjct: 196 DWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWD 255
Query: 247 DGM-DDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKGHADCLRFV 305
G D + + I+ V + P+ + L G D+ D LG ++ G++ L+ V
Sbjct: 256 QGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKV 315
Query: 306 ----RSFNVPLMVVG-GGGYTIRNVAR 327
F +V+ GGY + ++A+
Sbjct: 316 GVELMEFAQGKIVLALEGGYNLDSIAK 342
>AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365367 FORWARD LENGTH=552
Length = 552
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 157 HHAKKCEASGFC-YVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 215
HHA A GFC + N V ++ ++VL +D DVHHG+G +E F V+ +S
Sbjct: 276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335
Query: 216 HKF--GDFFPGTGHIKDIGVGSGKHYAINCPLN-DGMDDESFRGLFRTIIQKVMEVYQPE 272
H+ G+F+PGTG ++G G+ Y +N P + G+ D+ + F+ ++ + + P+
Sbjct: 336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395
Query: 273 AVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSF-NVPLMVVGGGGYTIRNVA 326
V++ G D+ GD LG +++ G++ + + ++V+ GGY +R+++
Sbjct: 396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSIS 450
>AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365399 FORWARD LENGTH=564
Length = 564
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 157 HHAKKCEASGFC-YVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 215
HHA A GFC + N V ++ ++VL +D DVHHG+G +E F V+ +S
Sbjct: 276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335
Query: 216 HKF--GDFFPGTGHIKDIGVGSGKHYAINCPLN-DGMDDESFRGLFRTIIQKVMEVYQPE 272
H+ G+F+PGTG ++G G+ Y +N P + G+ D+ + F+ ++ + + P+
Sbjct: 336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395
Query: 273 AVVLQCGADSLSGDRLGFFNLSVKGHADCLRFVRSF-NVPLMVVGGGGYTIRNVA 326
V++ G D+ GD LG +++ G++ + + ++V+ GGY +R+++
Sbjct: 396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSIS 450
>AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of the
RPD3/HDA1 superfamily 18 | chr5:24571297-24574372
REVERSE LENGTH=682
Length = 682
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 156/353 (44%), Gaps = 21/353 (5%)
Query: 1 MVMEEE---RKIEEGASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLI 57
M M E +K EG +G +K + Y D G+ P R+R+ +
Sbjct: 34 MTMTSESSGKKCGEGDGKVAGKSQRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKL 93
Query: 58 VYYSLHRRMEINRPFPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDC 117
+ +R + A ++ H+ +V+ + S++ + +R+ K + D
Sbjct: 94 QLAGVTQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKD----SRRNKIASQLDSI 149
Query: 118 PIFDGLFNYCQASAGGSLGAAVKLNRGEAD--IAINWAGGMHHAKKCEASGFCYVNDIVL 175
+ G +AG + A K+ GE D AI G HHA+ EA GFC N++ +
Sbjct: 150 YLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAV 208
Query: 176 GILELLKVH-----RRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFP--GTG 226
LL +++L +D D+HHG+G ++ F+ RV+ S H+ G F+P G
Sbjct: 209 AASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDG 268
Query: 227 HIKDIGVGSGKHYAINCPLND-GMDDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSG 285
+G G G+ + IN P G D + ++ I+ V + ++P+ ++L G D+ G
Sbjct: 269 DFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIG 328
Query: 286 DRLGFFNLSVKGHADCLRFVRSFNVPLMVVG-GGGYTIRNVARCWCYEVTFFL 337
D LG ++ G++ L+ + F +V+ GGY + ++ + V L
Sbjct: 329 DPLGGCCVTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLL 381
>AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |
chr4:16102774-16105439 REVERSE LENGTH=423
Length = 423
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 135/336 (40%), Gaps = 27/336 (8%)
Query: 10 EEGASLPSGPDAKKKRVTYFYEPSIGDYYYGQGHPMKPHRMRMAHNLIVYYSLHRR---- 65
E+ LPS R+ Y ++G + + HP R+ N + L +
Sbjct: 49 EKNPLLPSIQQLADARLIYSVSAALG--HNKESHPECSARVPAIVNALEMNELTPKFRGS 106
Query: 66 --MEINRPFPAGPDDIRRFHSDDYVDFLASVTPETLSEPIFARQLKRFNVGDDCPIFDGL 123
+E+ A +DI H YV L E + + D L
Sbjct: 107 QILELANFKTATVEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYATSTTFQDSL 166
Query: 124 FNYCQASAGGSL-GAAVKLNRGEADIAINWA---GGMHHAKKCEASGFCYVNDIVLGILE 179
A AG +L + + +R D I +A HHA GFC ++ +
Sbjct: 167 I---AAGAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAARH 223
Query: 180 LLKVH--RRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGSGK 237
+ H +R+ ID DVHHG+G +AF + +S H+ G + PGTG I DIG G G+
Sbjct: 224 AQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSY-PGTGKISDIGKGKGE 282
Query: 238 HYAINCPLNDGMDDESFRGLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGFFNLSVKG 297
+N PL G D + R +F II + ++P+ +++ G D+ D L +
Sbjct: 283 GTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTAT 342
Query: 298 HADCLRFVRSFNVPLMVVGG-------GGYTIRNVA 326
+ + ++ + V GG GGY + +++
Sbjct: 343 YYSLAKDIK--RLAKEVCGGRCVFFLEGGYNLESLS 376
>AT5G26040.2 | Symbols: HDA2 | histone deacetylase 2 |
chr5:9099321-9101598 REVERSE LENGTH=387
Length = 387
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 129/327 (39%), Gaps = 44/327 (13%)
Query: 20 DAKKKRVTYFYEPSIGDYYYG--QGHPMKPHRMRMAHNLIVYYSLHRRMEINRPFPAGPD 77
D +V+ Y S + G + HP + +V I P A
Sbjct: 68 DVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKI 127
Query: 78 DIRRFHSDDYVDFL-ASVTPETLSEPIFARQLKRFNVGDDCPIFDGLFNYCQASAGGSLG 136
D+ HS++Y++ L +S T ++E F V L+ + + G L
Sbjct: 128 DLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKV-----LYPFRKQVGGTILA 182
Query: 137 AAVKLNRGEADIAINWAGGMHHAKKCEASGFCYVNDIVLGI-LELLKVH-RRVLYIDIDV 194
A + RG AIN GG HH GFC DI L I L++ RV+ ID+D
Sbjct: 183 AKLATERG---WAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDA 239
Query: 195 HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIK-----DIGVGSGKHYAINCPLNDGM 249
H G+G E +RV + + + +P + + V SG
Sbjct: 240 HQGNGHETDLGDDNRVYILDMYN-PEIYPFDYRARRFIDQKVEVMSGT-----------T 287
Query: 250 DDESFRGLFRTIIQKVMEV----YQPEAVVLQCGADSLSGDRLGFFNLSVKG----HADC 301
DE R L + +EV +QPE V+ G D L GD LG +S G
Sbjct: 288 TDEYLRKL-----DEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKV 342
Query: 302 LRFVRSFNVPLMVVGGGGYTIRNVARC 328
RF R N+PL+++ GGY +++ AR
Sbjct: 343 FRFAREKNIPLVMLTSGGY-MKSSARV 368
>AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 |
chr3:16097479-16098386 FORWARD LENGTH=158
Length = 158
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 291 FNLSVKGHADCLRFVRSFNVPLMVVGGGGYTIRNVARCWCYEVTFFL 337
F++ GHA+C++FV+ FN+PL+V GGGGYT NVARCW E L
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL 49