Miyakogusa Predicted Gene

Lj0g3v0332319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0332319.1 Non Chatacterized Hit- tr|D8R1T4|D8R1T4_SELML
Putative uncharacterized protein OS=Selaginella moelle,49.02,3e-17,
,CUFF.22653.1
         (101 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23200.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   130   3e-31
AT5G08270.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   105   6e-24

>AT5G23200.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:7807319-7808988 FORWARD LENGTH=399
          Length = 399

 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 3/99 (3%)

Query: 1   MLPNVMVCPYDFPLTENNMRVYIPNILYGN-AEVNVKSFSRFWFKNGVSRNSESKVPTLN 59
           M PNVM+CPYDFPL   ++R YIPNI +G+  E+ +K F  FWFK G     E+  P L 
Sbjct: 298 MTPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEA--PVLK 355

Query: 60  TVVLVATRALQDEELLLNYRLSNSKRRPEWYAPLDEEED 98
           T+VLVATR+L +EELLLNYRLSNSKRRP+WY P++EEED
Sbjct: 356 TLVLVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEED 394


>AT5G08270.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G23200.1); Has 89 Blast hits to 86 proteins in
           45 species: Archae - 0; Bacteria - 0; Metazoa - 27;
           Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
           14 (source: NCBI BLink). | chr5:2661747-2663482 FORWARD
           LENGTH=386
          Length = 386

 Score =  105 bits (262), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 3/96 (3%)

Query: 1   MLPNVMVCPYDFPLTENNMRVYIPNILYGN-AEVNVKSFSRFWFKNGVSRNSESKVPTLN 59
           M  NVM+CPYDF L+E  MR YIPN+ +GN  +V +  F  F  + G   NS      L 
Sbjct: 293 MESNVMICPYDFLLSETEMRAYIPNVAFGNTGDVKMGRFESFLSRTG--SNSSLDAHVLK 350

Query: 60  TVVLVATRALQDEELLLNYRLSNSKRRPEWYAPLDE 95
           T+VLVAT+AL +EEL+LNYRLSNS++R EWY PLDE
Sbjct: 351 TIVLVATKALCNEELMLNYRLSNSEKRLEWYIPLDE 386