Miyakogusa Predicted Gene

Lj0g3v0331489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0331489.1 Non Chatacterized Hit- tr|B9GAQ2|B9GAQ2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,75.86,2e-17,Thymidylate synthase/dCMP
hydroxymethylase,Thymidylate synthase/dCMP hydroxymethylase domain;
thym_s,gene.g25872.t1.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34570.1 | Symbols: THY-2 | thymidylate synthase 2 | chr4:165...   372   e-104
AT2G16370.1 | Symbols: THY-1 | thymidylate synthase 1 | chr2:708...   368   e-102
AT2G21550.1 | Symbols:  | Bifunctional dihydrofolate reductase/t...   199   1e-51

>AT4G34570.1 | Symbols: THY-2 | thymidylate synthase 2 |
           chr4:16511129-16514110 REVERSE LENGTH=565
          Length = 565

 Score =  372 bits (956), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 167/193 (86%), Positives = 185/193 (95%)

Query: 15  IGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRRIILS 74
           IGLTEREEGDLGPVYGFQWRHFGA+Y+DMH DY+GQG+DQLLDVINKIK+NP+DRRII+S
Sbjct: 373 IGLTEREEGDLGPVYGFQWRHFGAKYTDMHADYTGQGFDQLLDVINKIKNNPDDRRIIMS 432

Query: 75  AWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHV 134
           AWNP DLKLMALPPCHMFAQF+VANGELSCQMYQRSADMGLGVPFNIASY+LLTC++AHV
Sbjct: 433 AWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCILAHV 492

Query: 135 CELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADFKLVG 194
           C+LVPGDF+HVIGDAHVY NHVRPLQEQL N PKPFP LKIN EKKDIDSFVA DF+L+G
Sbjct: 493 CDLVPGDFIHVIGDAHVYKNHVRPLQEQLENPPKPFPVLKINPEKKDIDSFVADDFELIG 552

Query: 195 YNPHQKIEMKMAV 207
           Y+PH+KI+MKMAV
Sbjct: 553 YDPHKKIDMKMAV 565


>AT2G16370.1 | Symbols: THY-1 | thymidylate synthase 1 |
           chr2:7082038-7084333 REVERSE LENGTH=519
          Length = 519

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 164/193 (84%), Positives = 183/193 (94%)

Query: 15  IGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRRIILS 74
           IGLTEREEGDLGPVYGFQWRHFGA+Y+DMH DY+GQG+DQL+DVI+KIK+NP+DRRII+S
Sbjct: 327 IGLTEREEGDLGPVYGFQWRHFGAKYTDMHADYTGQGFDQLVDVIDKIKNNPDDRRIIMS 386

Query: 75  AWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHV 134
           AWNP DLKLMALPPCHMFAQF+VA GELSCQMYQRSADMGLGVPFNIASY+LLTCM+AHV
Sbjct: 387 AWNPSDLKLMALPPCHMFAQFYVAEGELSCQMYQRSADMGLGVPFNIASYSLLTCMLAHV 446

Query: 135 CELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADFKLVG 194
           C+LVPGDF+HV+GDAHVY  HVRPLQEQLLNLPKPFP +KIN EKK IDSFVA+DF L G
Sbjct: 447 CDLVPGDFIHVLGDAHVYKTHVRPLQEQLLNLPKPFPVMKINPEKKQIDSFVASDFDLTG 506

Query: 195 YNPHQKIEMKMAV 207
           Y+PH+KIEMKMAV
Sbjct: 507 YDPHKKIEMKMAV 519


>AT2G21550.1 | Symbols:  | Bifunctional dihydrofolate
           reductase/thymidylate synthase | chr2:9227209-9230189
           FORWARD LENGTH=492
          Length = 492

 Score =  199 bits (505), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 95/181 (52%), Positives = 133/181 (73%), Gaps = 9/181 (4%)

Query: 13  YSIGLTEREEGDLGPVYGFQWRHFGARYSDMHKDYSGQGYDQLLDVINKIKHNPNDRRII 72
           + +  TE E+GD   ++G  W+H  AR+         Q + QL DVINKIK+NP+D+RI+
Sbjct: 319 FGVNATE-EDGDNPFLHGLHWKHCDARFVI-------QEFSQLSDVINKIKNNPHDQRIM 370

Query: 73  LSAWNPVDLKLMALPPCHMFAQFFVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIA 132
           L+A NP+D KL ++ PCH F QF+VANGE+SCQ+YQ S +  +G+PF+IA+Y+LLTC+IA
Sbjct: 371 LAACNPLDFKL-SVSPCHTFTQFYVANGEVSCQIYQSSTEASIGIPFSIATYSLLTCIIA 429

Query: 133 HVCELVPGDFVHVIGDAHVYHNHVRPLQEQLLNLPKPFPTLKINSEKKDIDSFVAADFKL 192
           HVC+L  GDF+HVIG A++   HV+ +Q+QL   PKPFP LKIN EKK +D+F A+D +L
Sbjct: 430 HVCDLGAGDFIHVIGQAYINKAHVKAIQKQLQISPKPFPILKINPEKKKMDNFEASDLEL 489

Query: 193 V 193
           +
Sbjct: 490 M 490