Miyakogusa Predicted Gene

Lj0g3v0331249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0331249.1 Non Chatacterized Hit- tr|B9T3K4|B9T3K4_RICCO
Glutathione s-transferase, putative OS=Ricinus
communi,73.68,0.00000006,GST_N_3,NULL; GST_NTER,Glutathione
S-transferase, N-terminal; no description,Thioredoxin-like
fold,CUFF.22585.1
         (41 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17170.1 | Symbols: ATGSTU24, GST, GSTU24 | glutathione S-tra...    51   2e-07
AT1G78340.1 | Symbols: ATGSTU22, GSTU22 | glutathione S-transfer...    51   2e-07

>AT1G17170.1 | Symbols: ATGSTU24, GST, GSTU24 | glutathione
          S-transferase TAU 24 | chr1:5869895-5870691 FORWARD
          LENGTH=218
          Length = 218

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/37 (64%), Positives = 30/37 (81%)

Query: 1  MADKVILLDFFACPFGMRVRIALAEKGIKYFNSQKTL 37
          MAD+VILLDF+A  FGMR RIALAEK +KY + ++ L
Sbjct: 1  MADEVILLDFWASMFGMRTRIALAEKRVKYDHREEDL 37


>AT1G78340.1 | Symbols: ATGSTU22, GSTU22 | glutathione
          S-transferase TAU 22 | chr1:29473046-29473797 REVERSE
          LENGTH=218
          Length = 218

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 30/38 (78%)

Query: 1  MADKVILLDFFACPFGMRVRIALAEKGIKYFNSQKTLR 38
          MAD+VILLDF+  PFG+R RIAL EKG+++   ++ LR
Sbjct: 1  MADEVILLDFWPSPFGVRARIALREKGVEFEYREENLR 38