Miyakogusa Predicted Gene

Lj0g3v0329839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329839.1 Non Chatacterized Hit- tr|I3S3B9|I3S3B9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.9,0,rplV_bact:
ribosomal protein L22,Ribosomal protein L22,
bacterial/chloroplast-type; seg,NULL; CHLORO,CUFF.22462.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28360.1 | Symbols:  | Ribosomal protein L22p/L17e family pro...   275   2e-74
AT1G52370.3 | Symbols:  | Ribosomal protein L22p/L17e family pro...   253   8e-68
AT1G52370.2 | Symbols:  | Ribosomal protein L22p/L17e family pro...   253   8e-68
AT1G52370.1 | Symbols:  | Ribosomal protein L22p/L17e family pro...   253   8e-68
ATCG00810.1 | Symbols: RPL22 | ribosomal protein L22 | chrC:8346...    60   1e-09

>AT4G28360.1 | Symbols:  | Ribosomal protein L22p/L17e family
           protein | chr4:14029294-14030926 REVERSE LENGTH=271
          Length = 271

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/275 (54%), Positives = 191/275 (69%), Gaps = 11/275 (4%)

Query: 1   MVQWQRHIFPILRHIHKGVDHVYHSAPKLSIS--HLSSSFPQGQFQGAWTTTSPSIS-RP 57
           MV W+R++  ++R + + V + + S    S S  +L S F QG  Q   +   PS S RP
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQGYLQ---SLLRPSYSSRP 57

Query: 58  MYHCFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLK 117
           +YH  Q  GIS+S  L A+  EE                 G+++ QK + K + VQAVLK
Sbjct: 58  LYHHLQQLGISTSRQLQAS--EEPVSSPLSSPALLGS---GKEEEQKIIPKRQKVQAVLK 112

Query: 118 GIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDR 177
            IKQSPKKVNLVAALVRGM V+DAL+QLQ+TVKRAA+TVY+VIH+ARANA+HNHGLD DR
Sbjct: 113 SIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPDR 172

Query: 178 LIIAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKK 237
           L++AEA+VGKG + K+++ H K R GI+  P CRLTV+VRE TPEEEA+IARLKVHNFKK
Sbjct: 173 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFKK 232

Query: 238 LSKRERRLVPHKLIETTPVWGRKNKPTSQNSGAAV 272
            SKRER+LVPHKLIET+P+W R+    +  S   V
Sbjct: 233 KSKRERQLVPHKLIETSPIWNRRGTKANHRSSELV 267


>AT1G52370.3 | Symbols:  | Ribosomal protein L22p/L17e family
           protein | chr1:19507052-19508699 FORWARD LENGTH=269
          Length = 269

 Score =  253 bits (647), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 143/261 (54%), Positives = 184/261 (70%), Gaps = 8/261 (3%)

Query: 1   MVQWQRHIFPILRHIHKGV-DHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMY 59
           M  WQ+++  ++R + K V D    +A   S  +L S F QG  Q    +T  S  RP+Y
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQGYLQSLLRSTYSS--RPLY 58

Query: 60  HCFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGI 119
           +  Q  GIS+S  L A   EE                 G+++ QK + K + VQAVLK I
Sbjct: 59  YHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGS---GKEEEQKIIPKRQKVQAVLKSI 113

Query: 120 KQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLI 179
           KQSPKKVNLVAALVRGM V+DAL+QLQ+TVKRA++TVY+VIH+ARANA+HNHGLD DRL+
Sbjct: 114 KQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDRLL 173

Query: 180 IAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLS 239
           +AEA+VGKG + K+++ H K R GI+  P CRLTV+VRE T EEEA+IARLKVHNFKKL+
Sbjct: 174 VAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKKLN 233

Query: 240 KRERRLVPHKLIETTPVWGRK 260
           KR+R+LVPHKLIET+P+W R+
Sbjct: 234 KRQRQLVPHKLIETSPIWNRR 254


>AT1G52370.2 | Symbols:  | Ribosomal protein L22p/L17e family
           protein | chr1:19507052-19508699 FORWARD LENGTH=269
          Length = 269

 Score =  253 bits (647), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 143/261 (54%), Positives = 184/261 (70%), Gaps = 8/261 (3%)

Query: 1   MVQWQRHIFPILRHIHKGV-DHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMY 59
           M  WQ+++  ++R + K V D    +A   S  +L S F QG  Q    +T  S  RP+Y
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQGYLQSLLRSTYSS--RPLY 58

Query: 60  HCFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGI 119
           +  Q  GIS+S  L A   EE                 G+++ QK + K + VQAVLK I
Sbjct: 59  YHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGS---GKEEEQKIIPKRQKVQAVLKSI 113

Query: 120 KQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLI 179
           KQSPKKVNLVAALVRGM V+DAL+QLQ+TVKRA++TVY+VIH+ARANA+HNHGLD DRL+
Sbjct: 114 KQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDRLL 173

Query: 180 IAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLS 239
           +AEA+VGKG + K+++ H K R GI+  P CRLTV+VRE T EEEA+IARLKVHNFKKL+
Sbjct: 174 VAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKKLN 233

Query: 240 KRERRLVPHKLIETTPVWGRK 260
           KR+R+LVPHKLIET+P+W R+
Sbjct: 234 KRQRQLVPHKLIETSPIWNRR 254


>AT1G52370.1 | Symbols:  | Ribosomal protein L22p/L17e family
           protein | chr1:19507052-19508699 FORWARD LENGTH=269
          Length = 269

 Score =  253 bits (647), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 143/261 (54%), Positives = 184/261 (70%), Gaps = 8/261 (3%)

Query: 1   MVQWQRHIFPILRHIHKGV-DHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISRPMY 59
           M  WQ+++  ++R + K V D    +A   S  +L S F QG  Q    +T  S  RP+Y
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQGYLQSLLRSTYSS--RPLY 58

Query: 60  HCFQHQGISSSTWLLANSPEETXXXXXXXXXXXXXXXKGEDQNQKAVSKPENVQAVLKGI 119
           +  Q  GIS+S  L A   EE                 G+++ QK + K + VQAVLK I
Sbjct: 59  YHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGS---GKEEEQKIIPKRQKVQAVLKSI 113

Query: 120 KQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNHGLDSDRLI 179
           KQSPKKVNLVAALVRGM V+DAL+QLQ+TVKRA++TVY+VIH+ARANA+HNHGLD DRL+
Sbjct: 114 KQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDRLL 173

Query: 180 IAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLS 239
           +AEA+VGKG + K+++ H K R GI+  P CRLTV+VRE T EEEA+IARLKVHNFKKL+
Sbjct: 174 VAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKKLN 233

Query: 240 KRERRLVPHKLIETTPVWGRK 260
           KR+R+LVPHKLIET+P+W R+
Sbjct: 234 KRQRQLVPHKLIETSPIWNRR 254


>ATCG00810.1 | Symbols: RPL22 | ribosomal protein L22 |
           chrC:83467-83949 REVERSE LENGTH=160
          Length = 160

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 5/151 (3%)

Query: 112 VQAVLKGIKQSPKKVNLVAALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNH 171
           V A+ + I  S  K   V   +RG   ++AL+ L+L   R    ++++++SA ANASHN 
Sbjct: 13  VYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNK 72

Query: 172 GLDSDRLIIAEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREIT--PEEEAKIAR 229
           G     L+I++A V +G   K++    + R   + R  C +T+V+ +I+   + E  +  
Sbjct: 73  GFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQYEEYLMY 132

Query: 230 LKVHNFKKLSKRERRLVPHKLIETTPVWGRK 260
           LK       S   R L  +    +  +W +K
Sbjct: 133 LKKPG---CSNENRNLTCYDTYSSGGLWDKK 160