Miyakogusa Predicted Gene

Lj0g3v0329639.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329639.1 Non Chatacterized Hit- tr|I1NBW7|I1NBW7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,57.73,6e-19,coiled-coil,NULL; seg,NULL,CUFF.22450.1
         (163 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14520.1 | Symbols:  | pescadillo-related | chr5:4680789-4684...    49   2e-06

>AT5G14520.1 | Symbols:  | pescadillo-related | chr5:4680789-4684330
           REVERSE LENGTH=590
          Length = 590

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 71  EQQYHDDLKKELKGVTHTSAGSNVEKETSGGEKTVEPATKVQENVDDTADMGXXXXXXXX 130
           E+QYH++LK E+ G     A    E E   GE++V  A ++ +   + ADM         
Sbjct: 502 EKQYHEELKMEINGSKDVVAPVLAEGE---GEESVPDAMQIAQ---EDADMPKVLMSRKK 555

Query: 131 XXXXEAMQISNKRKQDQTELLKQRRKRLDEAQS 163
               +AM+IS  RK+   E+++QR+KRL++ Q 
Sbjct: 556 RKLYDAMKISQSRKRSGVEIIEQRKKRLNDTQP 588