Miyakogusa Predicted Gene

Lj0g3v0329549.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0329549.1 Non Chatacterized Hit- tr|I1MS13|I1MS13_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56335 PE,77.2,0,no
description,NULL; Rhomboid-like,NULL; Ran BP2/NZF zinc
finger-like,NULL; ZF_RANBP2_1,Zinc finger,,CUFF.22443.1
         (330 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17611.1 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14...   346   1e-95
AT3G17611.2 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14...   210   9e-55
AT3G17611.3 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14...   126   2e-29
AT3G58460.1 | Symbols: ATRBL15, RBL15 | RHOMBOID-like protein 15...    58   7e-09
AT3G58460.2 | Symbols: RBL15 | RHOMBOID-like protein 15 | chr3:2...    58   8e-09

>AT3G17611.1 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14 |
           chr3:6024946-6026173 FORWARD LENGTH=334
          Length = 334

 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 178/328 (54%), Positives = 220/328 (67%), Gaps = 4/328 (1%)

Query: 6   GRRVSRGMLPLLALHTFAEYYRSDRKPPVTAALIAANTLIHLRPSFLEPFIPPIDQVWFN 65
           GRR   GMLPLLAL   AEYYR   KPPVTA+L+AANTL++LRP+F++P IP I +VWFN
Sbjct: 7   GRRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHISEVWFN 66

Query: 66  PHLIVKNKDLKRFFLSAFYHIGEPHLVYNMLSLLWKGMQLETAMGSAEFASMVASLLALS 125
           PHLI K+KDLKR FLSAFYH+ EPHLVYNM+SLLWKG++LET+MGS+EFASMV +L+ +S
Sbjct: 67  PHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIGMS 126

Query: 126 QGVTXXXXXXXXXFFDYGRPYYYEYAVGFSGVLFALKVVLNSQSENFTQVYGVIVPSRYA 185
           QGVT          FDY R YY EYAVGFSGVLFA+KVVLNSQ+E+++ VYG++VP++YA
Sbjct: 127 QGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVPTKYA 186

Query: 186 AWAELFLIQMFVPGVSFXXXXXXXXXXXXXXXXXXXXXXXDPVVSLMRGVGAAVNWPXXX 245
           AWAEL L+QMFVP  SF                       DPV   +RGV   V WP   
Sbjct: 187 AWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTWPLRF 246

Query: 246 XXXXXXXXXXXXXXXXAVGGDRT---GRNAWRCQACTFDNWGLLNECEMCGTRRG-GSGG 301
                            VG  +T   G   WRCQ+CT+DN G L+ CEMCG+ R  G+G 
Sbjct: 247 LNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGSGRARGNGW 306

Query: 302 LASFPRSRRDSDGLPVDELRRRRIDRFA 329
             +   +   S+ LP+DELRRRR++RF+
Sbjct: 307 SLNQGPALSSSNDLPLDELRRRRVERFS 334


>AT3G17611.2 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14 |
           chr3:6025454-6026173 FORWARD LENGTH=239
          Length = 239

 Score =  210 bits (535), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 114/239 (47%), Positives = 146/239 (61%), Gaps = 4/239 (1%)

Query: 95  MLSLLWKGMQLETAMGSAEFASMVASLLALSQGVTXXXXXXXXXFFDYGRPYYYEYAVGF 154
           M+SLLWKG++LET+MGS+EFASMV +L+ +SQGVT          FDY R YY EYAVGF
Sbjct: 1   MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGF 60

Query: 155 SGVLFALKVVLNSQSENFTQVYGVIVPSRYAAWAELFLIQMFVPGVSFXXXXXXXXXXXX 214
           SGVLFA+KVVLNSQ+E+++ VYG++VP++YAAWAEL L+QMFVP  SF            
Sbjct: 61  SGVLFAMKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGII 120

Query: 215 XXXXXXXXXXXDPVVSLMRGVGAAVNWPXXXXXXXXXXXXXXXXXXXAVGGDRTGRNA-- 272
                      DPV   +RGV   V WP                    VG  +TG     
Sbjct: 121 YLKLKGSYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPG 180

Query: 273 -WRCQACTFDNWGLLNECEMCGTRRG-GSGGLASFPRSRRDSDGLPVDELRRRRIDRFA 329
            WRCQ+CT+DN G L+ CEMCG+ R  G+G   +   +   S+ LP+DELRRRR++RF+
Sbjct: 181 IWRCQSCTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERFS 239


>AT3G17611.3 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14 |
           chr3:6025652-6026173 FORWARD LENGTH=173
          Length = 173

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 95/173 (54%), Gaps = 4/173 (2%)

Query: 161 LKVVLNSQSENFTQVYGVIVPSRYAAWAELFLIQMFVPGVSFXXXXXXXXXXXXXXXXXX 220
           +KVVLNSQ+E+++ VYG++VP++YAAWAEL L+QMFVP  SF                  
Sbjct: 1   MKVVLNSQAEDYSSVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKG 60

Query: 221 XXXXXDPVVSLMRGVGAAVNWPXXXXXXXXXXXXXXXXXXXAVGGDRT---GRNAWRCQA 277
                DPV   +RGV   V WP                    VG  +T   G   WRCQ+
Sbjct: 61  SYSGSDPVTMAVRGVSRLVTWPLRFLNGMVRSRRRRITGRGRVGRGQTGIAGPGIWRCQS 120

Query: 278 CTFDNWGLLNECEMCGTRRG-GSGGLASFPRSRRDSDGLPVDELRRRRIDRFA 329
           CT+DN G L+ CEMCG+ R  G+G   +   +   S+ LP+DELRRRR++RF+
Sbjct: 121 CTYDNSGWLSACEMCGSGRARGNGWSLNQGPALSSSNDLPLDELRRRRVERFS 173


>AT3G58460.1 | Symbols: ATRBL15, RBL15 | RHOMBOID-like protein 15 |
           chr3:21623374-21626348 REVERSE LENGTH=403
          Length = 403

 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)

Query: 61  QVWFNPHLIVKNKDLKRFFLSAFYHIGEPHLVYNMLSLLWKGMQLETAMGSAEFASMVAS 120
           +V F P  I+    + RF+ +  +H    H+++NM++L+  G +LE  MGS     +   
Sbjct: 50  EVCFLPSAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTV- 108

Query: 121 LLALSQGVTXXXXXXXXXFFDYGRPYYY------EYAVGFSGVLFALKVVLNSQSENFTQ 174
           LLA +  V          +     P+Y       E A+GFSG+LF++ V+  S S   ++
Sbjct: 109 LLATTNAVLHLLIASLAGY----NPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSR 164

Query: 175 -VYGVI-VPSRYAAWAELFLIQMFVPGVSF 202
            V+G+  VP++   W  L + Q+ +  VS 
Sbjct: 165 SVFGLFNVPAKLYPWILLIVFQLLMTNVSL 194


>AT3G58460.2 | Symbols: RBL15 | RHOMBOID-like protein 15 |
           chr3:21623374-21626642 REVERSE LENGTH=426
          Length = 426

 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)

Query: 61  QVWFNPHLIVKNKDLKRFFLSAFYHIGEPHLVYNMLSLLWKGMQLETAMGSAEFASMVAS 120
           +V F P  I+    + RF+ +  +H    H+++NM++L+  G +LE  MGS     +   
Sbjct: 73  EVCFLPSAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTV- 131

Query: 121 LLALSQGVTXXXXXXXXXFFDYGRPYYY------EYAVGFSGVLFALKVVLNSQSENFTQ 174
           LLA +  V          +     P+Y       E A+GFSG+LF++ V+  S S   ++
Sbjct: 132 LLATTNAVLHLLIASLAGY----NPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSR 187

Query: 175 -VYGVI-VPSRYAAWAELFLIQMFVPGVSF 202
            V+G+  VP++   W  L + Q+ +  VS 
Sbjct: 188 SVFGLFNVPAKLYPWILLIVFQLLMTNVSL 217