Miyakogusa Predicted Gene

Lj0g3v0328779.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0328779.2 Non Chatacterized Hit- tr|D8SLB5|D8SLB5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.08,3e-18,Thioredoxin-like,Thioredoxin-like fold;
seg,NULL,CUFF.22387.2
         (538 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18700.4 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   535   e-152
AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   535   e-152
AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   531   e-151
AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   505   e-143

>AT1G18700.4 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
           LENGTH=715
          Length = 715

 Score =  535 bits (1379), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 272/551 (49%), Positives = 361/551 (65%), Gaps = 27/551 (4%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L Q+YSSGSN  A+F+  W +I +LLDGVAN  ++ELG+ +L  YLA+K+ TG+ FFR 
Sbjct: 178 WLIQVYSSGSNSSAQFATVWRRIVALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRK 237

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
           G+PS+ + PP C  A C  RF+GEL+ D +T+WFATTVL LP++ Y++KE+LV  FL K 
Sbjct: 238 GLPSIFSFPPNCKTADCLIRFEGELSADAITDWFATTVLGLPRVFYHTKETLVSKFLSKV 297

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
             +KVKVI FS+TGERATP +RQAAKDYW  AS + +LWREE++S+WW A  VESAPAIV
Sbjct: 298 PPNKVKVILFSQTGERATPIVRQAAKDYWNFASLSHVLWREEDASFWWNALEVESAPAIV 357

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
            +KDPG KPVV+HGS N T+FL+++E NKQ  LPQLRS TSMELGCD RGYSRAGYD + 
Sbjct: 358 IMKDPGSKPVVYHGSGNRTWFLDILEQNKQLLLPQLRSTTSMELGCDARGYSRAGYDKVT 417

Query: 242 WYCAIAVGRPSLELNKMRETMCRVQETLSKHSEVDASSENQSLAPAVNAYKRKRLTFAWL 301
           WYCAI VGR S+ELNKMRETMCRVQ+ LSK+ + D +S++ S+ PA +A+K KRL+FAWL
Sbjct: 418 WYCAILVGRQSVELNKMRETMCRVQDALSKYDDSDDASKDPSITPAASAHKSKRLSFAWL 477

Query: 302 DGEKQKDYCQFYLGPAASDHTCGQGRGLTDIPLIFVIRYLRNSSAVDKKTQEMKKWKSVL 361
           DGE Q  YC FY+    S  TCG  R   D+P I ++RY RN++      Q+  KW   +
Sbjct: 478 DGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATETANAEQKSSKWPKTV 537

Query: 362 VQDLMDDSDQAGQFVAGYKGEVDISQITEWLANLIKDGDSRDLPFFTLRTPKLVPDDTEP 421
            Q   DD D A Q V  Y G  +I QI +WL+ ++ DGD+R+LPF+  +TP+LVP+  EP
Sbjct: 538 WQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFYRAKTPELVPESAEP 597

Query: 422 LWAKTSPMIPLKNLKQSIPGVLSGLSVYLEDPRIGPALLLGALISFGTIWLXXXXXXXXX 481
           + +     +      Q +  + + +  YL DPR+GP LLLGAL+S G +W          
Sbjct: 598 MRSGVPKTV---KATQKLLSLWNRIKDYLADPRMGPTLLLGALLSAGNVWWMRSRSSTQQ 654

Query: 482 XXXXXXXXXAKAPSKEDRKQRPTDRV--------------RSRSNKKAPPSMTDWEPSDA 527
                      A + +    +P D V              R+   ++ P S+TD EP DA
Sbjct: 655 ----------PAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITDNEPKDA 704

Query: 528 YQMPLSDSESD 538
            Q+  S S+SD
Sbjct: 705 VQILSSGSDSD 715


>AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
           LENGTH=700
          Length = 700

 Score =  535 bits (1378), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 272/551 (49%), Positives = 361/551 (65%), Gaps = 27/551 (4%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L Q+YSSGSN  A+F+  W +I +LLDGVAN  ++ELG+ +L  YLA+K+ TG+ FFR 
Sbjct: 163 WLIQVYSSGSNSSAQFATVWRRIVALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRK 222

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
           G+PS+ + PP C  A C  RF+GEL+ D +T+WFATTVL LP++ Y++KE+LV  FL K 
Sbjct: 223 GLPSIFSFPPNCKTADCLIRFEGELSADAITDWFATTVLGLPRVFYHTKETLVSKFLSKV 282

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
             +KVKVI FS+TGERATP +RQAAKDYW  AS + +LWREE++S+WW A  VESAPAIV
Sbjct: 283 PPNKVKVILFSQTGERATPIVRQAAKDYWNFASLSHVLWREEDASFWWNALEVESAPAIV 342

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
            +KDPG KPVV+HGS N T+FL+++E NKQ  LPQLRS TSMELGCD RGYSRAGYD + 
Sbjct: 343 IMKDPGSKPVVYHGSGNRTWFLDILEQNKQLLLPQLRSTTSMELGCDARGYSRAGYDKVT 402

Query: 242 WYCAIAVGRPSLELNKMRETMCRVQETLSKHSEVDASSENQSLAPAVNAYKRKRLTFAWL 301
           WYCAI VGR S+ELNKMRETMCRVQ+ LSK+ + D +S++ S+ PA +A+K KRL+FAWL
Sbjct: 403 WYCAILVGRQSVELNKMRETMCRVQDALSKYDDSDDASKDPSITPAASAHKSKRLSFAWL 462

Query: 302 DGEKQKDYCQFYLGPAASDHTCGQGRGLTDIPLIFVIRYLRNSSAVDKKTQEMKKWKSVL 361
           DGE Q  YC FY+    S  TCG  R   D+P I ++RY RN++      Q+  KW   +
Sbjct: 463 DGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATETANAEQKSSKWPKTV 522

Query: 362 VQDLMDDSDQAGQFVAGYKGEVDISQITEWLANLIKDGDSRDLPFFTLRTPKLVPDDTEP 421
            Q   DD D A Q V  Y G  +I QI +WL+ ++ DGD+R+LPF+  +TP+LVP+  EP
Sbjct: 523 WQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFYRAKTPELVPESAEP 582

Query: 422 LWAKTSPMIPLKNLKQSIPGVLSGLSVYLEDPRIGPALLLGALISFGTIWLXXXXXXXXX 481
           + +     +      Q +  + + +  YL DPR+GP LLLGAL+S G +W          
Sbjct: 583 MRSGVPKTV---KATQKLLSLWNRIKDYLADPRMGPTLLLGALLSAGNVWWMRSRSSTQQ 639

Query: 482 XXXXXXXXXAKAPSKEDRKQRPTDRV--------------RSRSNKKAPPSMTDWEPSDA 527
                      A + +    +P D V              R+   ++ P S+TD EP DA
Sbjct: 640 ----------PAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITDNEPKDA 689

Query: 528 YQMPLSDSESD 538
            Q+  S S+SD
Sbjct: 690 VQILSSGSDSD 700


>AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443814 FORWARD
           LENGTH=705
          Length = 705

 Score =  531 bits (1368), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/543 (49%), Positives = 356/543 (65%), Gaps = 27/543 (4%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L Q+YSSGSN  A+F+  W +I +LLDGVAN  ++ELG+ +L  YLA+K+ TG+ FFR 
Sbjct: 163 WLIQVYSSGSNSSAQFATVWRRIVALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRK 222

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
           G+PS+ + PP C  A C  RF+GEL+ D +T+WFATTVL LP++ Y++KE+LV  FL K 
Sbjct: 223 GLPSIFSFPPNCKTADCLIRFEGELSADAITDWFATTVLGLPRVFYHTKETLVSKFLSKV 282

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
             +KVKVI FS+TGERATP +RQAAKDYW  AS + +LWREE++S+WW A  VESAPAIV
Sbjct: 283 PPNKVKVILFSQTGERATPIVRQAAKDYWNFASLSHVLWREEDASFWWNALEVESAPAIV 342

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
            +KDPG KPVV+HGS N T+FL+++E NKQ  LPQLRS TSMELGCD RGYSRAGYD + 
Sbjct: 343 IMKDPGSKPVVYHGSGNRTWFLDILEQNKQLLLPQLRSTTSMELGCDARGYSRAGYDKVT 402

Query: 242 WYCAIAVGRPSLELNKMRETMCRVQETLSKHSEVDASSENQSLAPAVNAYKRKRLTFAWL 301
           WYCAI VGR S+ELNKMRETMCRVQ+ LSK+ + D +S++ S+ PA +A+K KRL+FAWL
Sbjct: 403 WYCAILVGRQSVELNKMRETMCRVQDALSKYDDSDDASKDPSITPAASAHKSKRLSFAWL 462

Query: 302 DGEKQKDYCQFYLGPAASDHTCGQGRGLTDIPLIFVIRYLRNSSAVDKKTQEMKKWKSVL 361
           DGE Q  YC FY+    S  TCG  R   D+P I ++RY RN++      Q+  KW   +
Sbjct: 463 DGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATETANAEQKSSKWPKTV 522

Query: 362 VQDLMDDSDQAGQFVAGYKGEVDISQITEWLANLIKDGDSRDLPFFTLRTPKLVPDDTEP 421
            Q   DD D A Q V  Y G  +I QI +WL+ ++ DGD+R+LPF+  +TP+LVP+  EP
Sbjct: 523 WQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFYRAKTPELVPESAEP 582

Query: 422 LWAKTSPMIPLKNLKQSIPGVLSGLSVYLEDPRIGPALLLGALISFGTIWLXXXXXXXXX 481
           + +     +      Q +  + + +  YL DPR+GP LLLGAL+S G +W          
Sbjct: 583 MRSGVPKTV---KATQKLLSLWNRIKDYLADPRMGPTLLLGALLSAGNVWWMRSRSSTQQ 639

Query: 482 XXXXXXXXXAKAPSKEDRKQRPTDRV--------------RSRSNKKAPPSMTDWEPSDA 527
                      A + +    +P D V              R+   ++ P S+TD EP DA
Sbjct: 640 ----------PAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITDNEPKDA 689

Query: 528 YQM 530
            Q+
Sbjct: 690 VQI 692


>AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
           LENGTH=695
          Length = 695

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/551 (48%), Positives = 355/551 (64%), Gaps = 32/551 (5%)

Query: 2   YLCQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRN 61
           +L Q+YSSGSN  A+F+  W +I +LLDGVAN  ++ELG+ +L  YLA+K+ TG+ FFR 
Sbjct: 163 WLIQVYSSGSNSSAQFATVWRRIVALLDGVANHAMLELGDVQLVTYLAEKKPTGQVFFRK 222

Query: 62  GIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKS 121
              ++V I   C+       F+GEL+ D +T+WFATTVL LP++ Y++KE+LV  FL K 
Sbjct: 223 ---AMVYISERCNDYTL--GFEGELSADAITDWFATTVLGLPRVFYHTKETLVSKFLSKV 277

Query: 122 SQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIV 181
             +KVKVI FS+TGERATP +RQAAKDYW  AS + +LWREE++S+WW A  VESAPAIV
Sbjct: 278 PPNKVKVILFSQTGERATPIVRQAAKDYWNFASLSHVLWREEDASFWWNALEVESAPAIV 337

Query: 182 FLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTII 241
            +KDPG KPVV+HGS N T+FL+++E NKQ  LPQLRS TSMELGCD RGYSRAGYD + 
Sbjct: 338 IMKDPGSKPVVYHGSGNRTWFLDILEQNKQLLLPQLRSTTSMELGCDARGYSRAGYDKVT 397

Query: 242 WYCAIAVGRPSLELNKMRETMCRVQETLSKHSEVDASSENQSLAPAVNAYKRKRLTFAWL 301
           WYCAI VGR S+ELNKMRETMCRVQ+ LSK+ + D +S++ S+ PA +A+K KRL+FAWL
Sbjct: 398 WYCAILVGRQSVELNKMRETMCRVQDALSKYDDSDDASKDPSITPAASAHKSKRLSFAWL 457

Query: 302 DGEKQKDYCQFYLGPAASDHTCGQGRGLTDIPLIFVIRYLRNSSAVDKKTQEMKKWKSVL 361
           DGE Q  YC FY+    S  TCG  R   D+P I ++RY RN++      Q+  KW   +
Sbjct: 458 DGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATETANAEQKSSKWPKTV 517

Query: 362 VQDLMDDSDQAGQFVAGYKGEVDISQITEWLANLIKDGDSRDLPFFTLRTPKLVPDDTEP 421
            Q   DD D A Q V  Y G  +I QI +WL+ ++ DGD+R+LPF+  +TP+LVP+  EP
Sbjct: 518 WQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFYRAKTPELVPESAEP 577

Query: 422 LWAKTSPMIPLKNLKQSIPGVLSGLSVYLEDPRIGPALLLGALISFGTIWLXXXXXXXXX 481
           + +     +      Q +  + + +  YL DPR+GP LLLGAL+S G +W          
Sbjct: 578 MRSGVPKTV---KATQKLLSLWNRIKDYLADPRMGPTLLLGALLSAGNVWWMRSRSSTQQ 634

Query: 482 XXXXXXXXXAKAPSKEDRKQRPTDRV--------------RSRSNKKAPPSMTDWEPSDA 527
                      A + +    +P D V              R+   ++ P S+TD EP DA
Sbjct: 635 ----------PAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITDNEPKDA 684

Query: 528 YQMPLSDSESD 538
            Q+  S S+SD
Sbjct: 685 VQILSSGSDSD 695