Miyakogusa Predicted Gene
- Lj0g3v0328729.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0328729.1 tr|G7KPS9|G7KPS9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,65.7,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; PPR: pentatricopeptide repeat domain,Pent,CUFF.22384.1
(739 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 658 0.0
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 613 e-175
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 532 e-151
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 6e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 6e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 79 9e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 79 1e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 2e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 9e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 74 5e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 72 1e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 6e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 1e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 67 4e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 67 6e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 66 1e-10
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 4e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 2e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 52 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/724 (48%), Positives = 467/724 (64%), Gaps = 47/724 (6%)
Query: 4 KDVSMNNICSSLMMEALCKGGYLDEAFNLMDFLGVSQHXXXXXXXXXXXXXSCVESKSII 63
K++S+++ ++++LC GG+LD+A + + +C ++S+
Sbjct: 121 KEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVY 180
Query: 64 QASKCLELMEKQMVGKNEATYSELLKLAVLQRSLPTALLIWQEYNKHHSKSIIALHKFIW 123
ASKCLELM+++ VGKN TY LLKLAV QR+L T IW+ Y H++ I++L +FIW
Sbjct: 181 HASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIW 240
Query: 124 TFIRLGDLKSAYEALQQMVSLPMTGNI-AGTVYGKFYSTILDIPVPSNKKLGPTMLDFMG 182
+F RLGDLKSAYE LQ MV L + G + GK +ST L IPVPS + G F
Sbjct: 241 SFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGV 300
Query: 183 DKQLDSCIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLDELS 242
++ C S + LP KG NK + I
Sbjct: 301 TDRIVDCNSSSKVALP--------KGH--------------------NKILAI------- 325
Query: 243 RRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQ 302
+VLRWSFNDVIH C + KN LA++L++QM+ LG+ PSS TYDG I+A +F
Sbjct: 326 --------RVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFP 377
Query: 303 SNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNAL 362
+ G+ +LK+MQQ+NLKP +STLAT++ CSKALQ+DLAE LD+ISEC +P+N L
Sbjct: 378 EGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 437
Query: 363 LASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKR 422
LA+ + L+QPERAV+V A+MK++KL PD+RTYELLFSLFG VN+PYE NMLSQ+ KR
Sbjct: 438 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 497
Query: 423 INAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
INAIE DM NG QHS +S N+L ALG E M+ E+I + AE L + N L T YN
Sbjct: 498 INAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYN 557
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+VLH L+EA + + INIFKRMK CG D TYNIM+DCCS++ SYKSA L+SMMIR
Sbjct: 558 IVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRD 617
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII 602
GFSP T+TAL+KILL D F EALNLL++ L+ I LDVL +NT LR+A K ID+I
Sbjct: 618 GFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVI 677
Query: 603 ELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS-EDGNILREKRR 661
E IVE MH+EKV P+P TC YVFS YV G+H TAIEAL VLSLRM++ ED L++K+
Sbjct: 678 EYIVEQMHREKVNPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKI 737
Query: 662 FVDE-FILAEDSAAESDILVKLFEDSEDEFAVGLLNLRWCAVLGFPVCESADQSLWAKRI 720
++E F+++ED AE+ I ++LF SE+ A LLNLRWCA+LG + S DQS WA+ +
Sbjct: 738 ELEENFVMSEDPEAETKI-IELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARAL 796
Query: 721 ELQF 724
++
Sbjct: 797 SNKY 800
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 613 bits (1580), Expect = e-175, Method: Compositional matrix adjust.
Identities = 340/724 (46%), Positives = 446/724 (61%), Gaps = 79/724 (10%)
Query: 4 KDVSMNNICSSLMMEALCKGGYLDEAFNLMDFLGVSQHXXXXXXXXXXXXXSCVESKSII 63
K++S+++ ++++LC GG+LD+A + + +C ++S+
Sbjct: 125 KEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVY 184
Query: 64 QASKCLELMEKQMVGKNEATYSELLKLAVLQRSLPTALLIWQEYNKHHSKSIIALHKFIW 123
ASKCLELM+++ VGKN TY LLKLAV QR+L T IW+ Y H++ I++L +FIW
Sbjct: 185 HASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIW 244
Query: 124 TFIRLGDLKSAYEALQQMVSLPMTGNI-AGTVYGKFYSTILDIPVPSNKKLGPTMLDFMG 182
+F RLGDLKSAYE LQ MV L + G + GK +ST L IPVPS + G F
Sbjct: 245 SFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGV 304
Query: 183 DKQLDSCIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLDELS 242
++ C S + LP KG NK + I
Sbjct: 305 TDRIVDCNSSSKVALP--------KGH--------------------NKILAI------- 329
Query: 243 RRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQ 302
+VLRWSFNDVIH C + KN LA++L++Q
Sbjct: 330 --------RVLRWSFNDVIHACGQSKNSELAEQLMLQ----------------------- 358
Query: 303 SNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNAL 362
LK+MQQ+NLKP +STLAT++ CSKALQ+DLAE LD+ISEC +P+N L
Sbjct: 359 ---------LKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 409
Query: 363 LASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKR 422
LA+ + L+QPERAV+V A+MK++KL PD+RTYELLFSLFG VN+PYE NMLSQ+ KR
Sbjct: 410 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 469
Query: 423 INAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
INAIE DM NG QHS +S N+L ALG E M+ E+I + AE L + N L T YN
Sbjct: 470 INAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYN 529
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+VLH L+EA + + INIFKRMK CG D TYNIM+DCCS++ SYKSA L+SMMIR
Sbjct: 530 IVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRD 589
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII 602
GFSP T+TAL+KILL D F EALNLL++ L+ I LDVL +NT LR+A K ID+I
Sbjct: 590 GFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVI 649
Query: 603 ELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS-EDGNILREKRR 661
E IVE MH+EKV P+P TC YVFS YV G+H TAIEAL VLSLRM++ ED L++K+
Sbjct: 650 EYIVEQMHREKVNPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKI 709
Query: 662 FVDE-FILAEDSAAESDILVKLFEDSEDEFAVGLLNLRWCAVLGFPVCESADQSLWAKRI 720
++E F+++ED AE+ I ++LF SE+ A LLNLRWCA+LG + S DQS WA+ +
Sbjct: 710 ELEENFVMSEDPEAETKI-IELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARAL 768
Query: 721 ELQF 724
++
Sbjct: 769 SNKY 772
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 287/603 (47%), Positives = 381/603 (63%), Gaps = 44/603 (7%)
Query: 4 KDVSMNNICSSLMMEALCKGGYLDEAFNLMDFLGVSQHXXXXXXXXXXXXXSCVESKSII 63
K++S+++ ++++LC GG+LD+A + + +C ++S+
Sbjct: 125 KEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGACARTRSVY 184
Query: 64 QASKCLELMEKQMVGKNEATYSELLKLAVLQRSLPTALLIWQEYNKHHSKSIIALHKFIW 123
ASKCLELM+++ VGKN TY LLKLAV QR+L T IW+ Y H++ I++L +FIW
Sbjct: 185 HASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDILSLRRFIW 244
Query: 124 TFIRLGDLKSAYEALQQMVSLPMTGNI-AGTVYGKFYSTILDIPVPSNKKLGPTMLDFMG 182
+F RLGDLKSAYE LQ MV L + G + GK +ST L IPVPS + G F
Sbjct: 245 SFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPVPSKDETGSEKFAFGV 304
Query: 183 DKQLDSCIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLDELS 242
++ C S + LP KG NK + I
Sbjct: 305 TDRIVDCNSSSKVALP--------KGH--------------------NKILAI------- 329
Query: 243 RRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQ 302
+VLRWSFNDVIH C + KN LA++L++QM+ LG+ PSS TYDG I+A +F
Sbjct: 330 --------RVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFP 381
Query: 303 SNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNAL 362
+ G+ +LK+MQQ+NLKP +STLAT++ CSKALQ+DLAE LD+ISEC +P+N L
Sbjct: 382 EGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNL 441
Query: 363 LASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKR 422
LA+ + L+QPERAV+V A+MK++KL PD+RTYELLFSLFG VN+PYE NMLSQ+ KR
Sbjct: 442 LAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKR 501
Query: 423 INAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
INAIE DM NG QHS +S N+L ALG E M+ E+I + AE L + N L T YN
Sbjct: 502 INAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYN 561
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+VLH L+EA + + INIFKRMK CG D TYNIM+DCCS++ SYKSA L+SMMIR
Sbjct: 562 IVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRD 621
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII 602
GFSP T+TAL+KILL D F EALNLL++ L+ I LDVL +NT LR+A K +I ++
Sbjct: 622 GFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKVKIFVV 681
Query: 603 ELI 605
+ +
Sbjct: 682 KTL 684
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 156/371 (42%), Gaps = 35/371 (9%)
Query: 240 ELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAA 299
EL R+ + +K+ ++ +I G K+ + A L +M+I G K Y +I+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 300 SFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESF-LDRISECLSPHP 358
+ + DG +L+ M + + P + L K +L AE + I +SP
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 359 --YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLF------------------ 398
Y +L+ NQ ++A + M P+IRT+ +L
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 399 -SLFGFVNSPYEHSNM------LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE 451
SL G V ++ + L +L VAK + ++M + V+ +S K LL+ L +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELF---QEMVSRRVRPDIVSYKILLDGLCD 469
Query: 452 ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
+ +E F EK L IYN+++H + A K A ++F + L G P
Sbjct: 470 NGEPEKALEIFEKIEK----SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 512 DSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
D +TYNIM+ S A LL M G SP CTY LI+ L + ++ L+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 572 ERTRLDGIQLD 582
E + G +D
Sbjct: 586 EEIKRCGFSVD 596
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 495 QIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
+ +++ K+M+L G + T +IM++CC R A + +I+ G+ P T T++ L
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKV 614
I L + + +EAL L++R G + ++ N + C ++ L+++ M +
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 615 RPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+PN VT G V SG A+E L+ + R + D
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/426 (18%), Positives = 172/426 (40%), Gaps = 38/426 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F+ +I+G E A +L+ +M +G KP+ T + ++ D + ++ M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQP 372
+ +P T + + K+ Q LA L ++ E L Y+ ++
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA------- 425
+ A +F +M+ DI Y L F + + + +L + + ++I
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSA 322
Query: 426 ----------------IERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLF 469
+ ++M G+ ++ +L++ +E +L + ++ + +
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN---QLDKANHMLDLMV 379
Query: 470 VYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS 528
G P++ T +N++++ +A + +F++M L G D+ TYN ++ L
Sbjct: 380 SKGCGPNIRT--FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNT 588
+ A L M+ + P +Y L+ L + + +AL + E+ ++LD+ ++N
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRM 648
+ C ++D + + + V+P+ T + G + A L R
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-----DLLFRK 552
Query: 649 MSEDGN 654
M EDG+
Sbjct: 553 MEEDGH 558
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 147/349 (42%), Gaps = 25/349 (7%)
Query: 311 VLKIMQQENLKPLNSTLATLSVI---CSKALQLDLAESFLDRISECLSPHP----YNALL 363
VL + +Q LK + L TLS++ C + +L LA S + +I + L P ++ L+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK-LGYEPDTVTFSTLI 149
Query: 364 ASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRI 423
+ + A+++ +M ++ P L +L VN + V+ +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKP------TLITLNALVNG------LCLNGKVSDAV 197
Query: 424 NAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNV 483
I+R M G Q + ++ +L + + +E E+ + L Y++
Sbjct: 198 LLIDR-MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI----KLDAVKYSI 252
Query: 484 VLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG 543
++ L + A N+F M++ G+ D Y ++ + + L+ MI++
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIE 603
+P ++ALI +++ K EA L + GI D + + + + C + ++D
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 604 LIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+++ M + PN T + + Y + + +E + +SLR + D
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 193/475 (40%), Gaps = 78/475 (16%)
Query: 238 LDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQ 297
LDE+ R K L K ++ + V+ CA+E AK+ ++K G +P + TY+ ++Q
Sbjct: 269 LDEM-RSKGL---KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 298 AASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRIS-ECLSP 356
+ + L VLK M++ + + T L +A A ++ ++ + + P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 357 HP--YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNML 414
+ Y ++ + + + A+++F MK+ +P+ TY + SL G + E ML
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 415 SQLH----------------------VAKRINAIERDMANNGVQHSHLSMKNLLNALGEE 452
+ + K +N + R+M + G + + L++A G
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG-- 502
Query: 453 RMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPD 512
R E+ E N + T YN +L+ L + N+ MK G+ P
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTT--YNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 513 SETYNIMVDCCSILRSY----------KSASLLISMMI---------------------- 540
+Y++M+ C + +Y K + S M+
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 541 ---RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL-----RQ 592
+ G+ P + +++ I ++ +++A +LE R DG+ D++ +N+ + R
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 593 ACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
C+K E I++ + + +++P+ V+ V + G A+ L ++ R
Sbjct: 681 ECWK-----AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 161/413 (38%), Gaps = 66/413 (15%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQA-ASFQSNFRDGLGVLKI 314
++ ++H ++ Y A L +MK +G P+ TY+ I+ ++R LGVL
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQ 371
M+ + LK T +T+ C++ L A+ F + C P YNALL
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A+ V +M++ D TY L + +V + + +K + M
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVA--AYVRAGF-----------SKEAAGVIEMMT 378
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
GV + ++ +++A G+ E ++ FY ++ N T YN VL L +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN----TCTYNAVLSLLGKK 434
Query: 492 QKGQIAIN-----------------------------------IFKRMKLCGYHPDSETY 516
+ I +F+ MK CG+ PD +T+
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
N ++ S AS + M R GF+ TY AL+ L + + N++ +
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYV 629
G + ++ L+ CY + + Y+ E++ N + G +F +++
Sbjct: 555 KGFKPTETSYSLMLQ--CYAKGGN-------YLGIERIE-NRIKEGQIFPSWM 597
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 172/442 (38%), Gaps = 60/442 (13%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N+++ + A +I M GV P++ TY +I A + L + M
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 316 QQENLKPLNSTL-ATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
++ P T A LS++ K+ ++ + D S SP+ +N +LA C
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMD 472
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVA----------KR 422
+ +VF +MK PD T+ L S +G S + S M ++ A
Sbjct: 473 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNAL 532
Query: 423 INAIER------------DMANNGVQHSHLSMKNLL-------NALGEERM---IRE--- 457
+NA+ R DM + G + + S +L N LG ER+ I+E
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQI 592
Query: 458 ----------LIEYFYV-----AEKLFV----YG-NPSLATDIYNVVLHHLVEAQKGQIA 497
L+ F +E+ F +G P + I+N +L A
Sbjct: 593 FPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV--IFNSMLSIFTRNNMYDQA 650
Query: 498 INIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKI 557
I + ++ G PD TYN ++D A ++ + + P +Y +IK
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 558 LLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPN 617
+ EA+ +L GI+ + +NTF+ IE ++E M + RPN
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Query: 618 PVTCGYVFSAYVNSGFHNTAIE 639
+T V Y +G ++ A++
Sbjct: 771 ELTFKMVVDGYCRAGKYSEAMD 792
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 130/334 (38%), Gaps = 46/334 (13%)
Query: 333 ICSKALQLDLAESFLDRI---SECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLP 389
I + Q +A LD+I L Y +L + + + E+A+ +F +MK++ P
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSP 243
Query: 390 DIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNAL 449
+ TY ++ +FG + + ++I + +M + G++ + +L+A
Sbjct: 244 TLVTYNVILDVFGKMGRSW------------RKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 450 GEERMIRELIEYFYVAEK-------------LFVYGNPSLATD----------------- 479
E ++RE E+F + L V+G + T+
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 480 -IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
YN ++ V A + A + + M G P++ TY ++D A L
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
M G P TCTY A++ +L + + NE + +L + +G + +NT L K
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+ + M P+ T + SAY G
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 168/401 (41%), Gaps = 38/401 (9%)
Query: 212 VRKGVQPLGLAHQTI-----STGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAK 266
V G QP + + + +GN + + +L R+ + +K ++ VI K
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALAL----DLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 267 EKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNST 326
+ ++ A L +M++ G+K TY +I + DG +L+ M N+ P T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 327 LATL-SVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVLNQPERAVQVFAKMK 383
+ L V + L+ E + + I+ ++P YN+L+ N A Q+F M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 384 QIKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNMLSQLHVAKRIN 424
PDI TY +L + + G + + ++ ++ + ++N
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 425 AIE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIY 481
A + ++M + GV S ++ LL+ L + + + +E F +K +L IY
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK----SRMTLGIGIY 493
Query: 482 NVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIR 541
N+++H + A K A ++F + G PD TYN+M+ S A +L M
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 542 QGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
G +P TY LI+ L ++ L+E ++ G D
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/401 (18%), Positives = 158/401 (39%), Gaps = 60/401 (14%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++ K N LA L +M+ +K S Y +I + +F D L + M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERA 375
+ + +K D ++ Y++L+ + +
Sbjct: 272 EMKGIKA-------------------------DVVT-------YSSLIGGLCNDGKWDDG 299
Query: 376 VQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIE--RDMANN 433
++ +M ++PD+ T+ L +F + K + A E +M
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVF---------------VKEGKLLEAKELYNEMITR 344
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQ 492
G+ ++ +L++ +E + E + F + + G P + T Y+++++ +A+
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMF---DLMVSKGCEPDIVT--YSILINSYCKAK 399
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ + +F+ + G P++ TYN +V +A L M+ +G P TY
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
L+ L + + N+AL + E+ + + L + ++N + C ++D + + +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
V+P+ VT + G + A + R M EDG
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEA-----DMLFRKMKEDG 555
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/399 (18%), Positives = 169/399 (42%), Gaps = 36/399 (9%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
++ +I+ ++K + A ++ + LG +P + T+ ++ + + + ++
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 315 MQQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISE-CLSPH--PYNALLASCNVLN 370
M + +P T++TL + +C K ++ A +DR+ E P Y +L
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKG-RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
A+ +F KM++ + + Y ++ ++S + + L ++ +M
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIV------IDSLCKDGSFDDAL-------SLFNEM 271
Query: 431 ANNGVQHSHLSMKNLLNALGEE-------RMIRELIEYFYVAEKLFVYGNPSLATDIYNV 483
G++ ++ +L+ L + +M+RE+I + P + T ++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII---------PDVVT--FSA 320
Query: 484 VLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG 543
++ V+ K A ++ M G PD+ TYN ++D A+ + +M+ +G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIE 603
P TY+ LI + ++ ++ + L G+ + + +NT + C +++ +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 604 LIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+ + M V P+ VT G + ++G N A+E +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 162/368 (44%), Gaps = 20/368 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++G K + LA L+ +M+ ++ + Y +I + + D L + M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ + ++P T ++L S +C+ D + D I ++P+ +NAL+ + +
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A +++ +M + + PDI TY L + F + E +M + I +D
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--------ISKDCFP 398
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
N V ++ L+N + + I E +E F + + GN T Y ++H +A+
Sbjct: 399 NVVTYN-----TLINGFCKAKRIDEGVELFREMSQRGLVGN----TVTYTTLIHGFFQAR 449
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A +FK+M G HP+ TYN ++D + A ++ + R P TY
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I+ + + K + +L L G++ DV+++NT + C K + + + M ++
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 613 KVRPNPVT 620
P+ T
Sbjct: 570 GPLPDSGT 577
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 163/397 (41%), Gaps = 57/397 (14%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+ FN ++ AK K + L L +M+ LG+ + TY+ +I +S L +L
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLN 370
M + +P TL++L ++ A + +D++ E + P + L+ + N
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHN 204
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ AV + +M Q P++ TY ++ VN + ++ D+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVV------VNGLCKRGDI---------------DL 243
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
A NLLN + ++ ++ IY+ V+ L +
Sbjct: 244 A-----------FNLLNKMEAAKIEANVV--------------------IYSTVIDSLCK 272
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
+ A+N+F M+ G P+ TY+ ++ C + AS L+S MI + +P T
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
+ ALI +++ K EA L + I D+ +++ + C R+D + + E M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
+ PN VT + + + + + +E + +S R
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 169/406 (41%), Gaps = 32/406 (7%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM +G +P + T+ +I + + + ++ M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 316 QQENLKPLNSTLATLSVICS---KALQLDLAESFLDRISEC---LSPHPYNALLASCNVL 369
Q +P L T V+ + K +DLA + L+++ + Y+ ++ S
Sbjct: 217 VQRGCQP---NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
+ A+ +F +M+ + P++ TY L S + S +LS + IER
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM--------IERK 325
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLF-VYGNPSLATDI--YNVVLH 486
+ N V + L++A +E + E AEKL+ S+ DI Y+ +++
Sbjct: 326 INPNVV-----TFNALIDAFVKEGKLVE-------AEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+ A ++F+ M P+ TYN +++ + L M ++G
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
T TYT LI Q + A + ++ DG+ +++ +NT L C +++ ++
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 607 EYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
EY+ + K+ P T + +G + LSL+ + D
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 166/390 (42%), Gaps = 20/390 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++G K + LA L+ +M+ ++ Y+ II + D L + M
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ ++P T ++L S +C+ D + D I ++P+ ++AL+ + +
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A +++ +M + + PDI TY L + F + E +M + I +D
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--------ISKDCFP 396
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
N V +S L+ + + + E +E F + + GN T Y ++H +A+
Sbjct: 397 NVVTYS-----TLIKGFCKAKRVEEGMELFREMSQRGLVGN----TVTYTTLIHGFFQAR 447
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A +FK+M G HP+ TYNI++D A ++ + R P TY
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I+ + + K + L L G+ +V+ +NT + C K + + +++ M ++
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
PN T + A + G + E ++
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIK 597
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 147/392 (37%), Gaps = 51/392 (13%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN ++ AK + L L QM+ LG+ TY I +S L VL M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 317 QENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERA 375
+ +P TL++L + C RIS+ A
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSK-----------RISD----------------------A 172
Query: 376 VQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGV 435
V + +M ++ PD T+ L N E ++ Q M G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ-------------MVQRGC 219
Query: 436 QHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQ 495
Q ++ ++N L + I + EK G IYN ++ L + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK----GKIEADVVIYNTIIDGLCKYKHMD 275
Query: 496 IAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALI 555
A+N+F M G PD TY+ ++ C + AS L+S MI + +P T++ALI
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 556 KILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVR 615
+++ K EA L + I D+ +++ + C R+D + + E M +
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 616 PNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
PN VT + + + +E + +S R
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 168/417 (40%), Gaps = 36/417 (8%)
Query: 195 MYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLD-ELSRRKHLQLMKVL 253
++L + S ++ V++G QP + + T+ G K +D LS K ++ K+
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG--LCKRGDIDLALSLLKKMEKGKIE 255
Query: 254 R--WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGV 311
+N +I G K K+ A L +M G++P TY +I + D +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 312 LKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSPH--PYNALLASCNV 368
L M + + P T + L K +L AE D I + P Y++L+ +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYE 409
++ + A +F M P++ TY L F G V +
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 410 HSNMLSQLHVAKRINAIE---RDMANNGVQHSHLSMKNLLNALGEE-RMIRELIEYFYVA 465
++ ++ A+ + + + M + GV + L+ LL+ L + ++ + ++ + Y+
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 466 EKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSI 525
P + T YN+++ + +A K + +F + L G P+ YN M+
Sbjct: 496 RSTM---EPDIYT--YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 526 LRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
S + A L+ M G P + TY LI+ L+D + L++ R G D
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 161/401 (40%), Gaps = 26/401 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM +G KP + T+ +I + + + ++ M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP---YNALLASCNVLNQP 372
Q +P T T+ K +DLA S L ++ + YN ++
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ A+ +F +M + PD+ TY L S + S +LS + IER +
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM--------IERKINP 326
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLF-VYGNPSLATDI--YNVVLHHLV 489
N V S L ++A +E + E AEKL+ S+ DI Y+ +++
Sbjct: 327 NVVTFSAL-----IDAFVKEGKLVE-------AEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ A ++F+ M P+ TY+ ++ + + L M ++G T
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
TYT LI Q + A + ++ G+ ++L +N L C ++ ++ EY+
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 610 HQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS 650
+ + P+ T + +G E LSL+ +S
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 171/401 (42%), Gaps = 36/401 (8%)
Query: 212 VRKGVQPLGLAHQTI-STGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNY 270
V G QP + + + + K + A EL R+ + +K+ ++ +I G K+ +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 271 MLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL 330
A L +M+I G K TY+ +I + DG +L+ M + + P T + L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 331 SVICSKALQLDLAESFL-DRISECLSPHP--YNALLASCNVLNQPERAVQVFAKMKQIKL 387
K +L A+ L + + ++P+ YN+L+ N+ E A+Q+ M
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 388 LPDIRTYELLF-------------------SLFGFVNSPYEHSNML------SQLHVAKR 422
PDI T+ +L SL G + + ++ ++ +L VAK+
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 423 INAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
+ ++M + V+ +S K LL+ L + + + +E F EK L IY
Sbjct: 460 LF---QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK----SKMELDIGIYM 512
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+++H + A K A ++F + L G D+ YNIM+ S A +L M +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
G +P TY LI+ L D+ A L+E + G DV
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 160/387 (41%), Gaps = 57/387 (14%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN +++G E A +L+ +M +G KP+ T + ++ D + ++ M
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 317 QENLKPLNSTLA-TLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQP 372
+ +P T L+V+C K+ Q LA L ++ E L Y+ ++
Sbjct: 221 ETGFQPNEVTYGPVLNVMC-KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ A +F +M+ DI TY L GF N+ +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIG--GFCNAGR----------------------WD 315
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
+G +++R++I+ K+ +P++ T ++V++ V+
Sbjct: 316 DGA-----------------KLLRDMIK-----RKI----SPNVVT--FSVLIDSFVKEG 347
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
K + A + K M G P++ TYN ++D + A ++ +MI +G P T+
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
LI + + ++ L L L G+ + + +NT ++ C ++++ + + + M
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIE 639
+VRP+ V+ + ++G A+E
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALE 494
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 54/310 (17%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
Y L+S V + + AV +F M Q + LP + + LFS +++
Sbjct: 56 YRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFS-------------AIAKTK 102
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLA 477
+ + A+ + M + G+ HS ++ ++N R+L F K+ G P
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCR---CRKLSYAFSTMGKIMKLGYEPD-- 157
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T I+N +L+ L + A+ + RM G+ P T N +V+ + A +LI
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 538 MMIRQGFSPVTCTYTALIKI-----------------------------------LLQDE 562
M+ GF P TY ++ + L +D
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 563 KFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCG 622
+ A NL + G + D++ +NT + C R D ++ M + K+ PN VT
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 623 YVFSAYVNSG 632
+ ++V G
Sbjct: 338 VLIDSFVKEG 347
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNAL---GEERMIRELIEYFYVAEKLFVYGNPS 475
V+ + I+R M G Q + ++ +LN + G+ + EL+ + E+ N
Sbjct: 209 VSDAVVLIDR-MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK--MEER-----NIK 260
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
L Y++++ L + A N+F M++ G+ D TYN ++ + + L
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ MI++ SP T++ LI +++ K EA LL+ GI + + +N+ + C
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
+ R++ +V+ M + P+ +T + + Y + + +E + +SLR
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 166/409 (40%), Gaps = 40/409 (9%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGII----QAASFQSNFRDGLGVL 312
FN + AK K Y L L QM+ G+ S T +I + F ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 313 KIMQQENLKPLNSTLATLSVIC--SKALQLDLAESFLDRISECLSPHP----YNALLASC 366
K+ + + N+ L L + C S+AL+L +DR+ E + P N L+
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALEL------VDRMVE-MGHKPTLITLNTLVNGL 203
Query: 367 NVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAI 426
+ + AV + +M + P+ TY + ++ +L ++
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-------- 255
Query: 427 ERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVV 484
ER++ + V++S + ++ L ++ L F + ++ + G DI YN +
Sbjct: 256 ERNIKLDAVKYSII-----IDGLCKDG---SLDNAFNLFNEMEIKG---FKADIITYNTL 304
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
+ A + + + M P+ T+++++D + A L+ M+++G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDI-IE 603
+P T TY +LI ++ + EA+ +++ G D++ FN + C RID +E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 604 LIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
L E M V N VT + + SG A + Q + R + D
Sbjct: 425 LFRE-MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 82/173 (47%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
+N + + + ++ ++ + + K+M+ G T +IM++C R A + ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
+ G+ P T + L+ L + + +EAL L++R G + ++ NT + C ++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
++++ M + +PN VT G V + SG A+E L+ + R + D
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 177/412 (42%), Gaps = 30/412 (7%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ +IHG + A L V+MK P+ TY +I++ + L ++K M
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 316 QQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISE-CLSPH--PYNALLASCNVLNQ 371
++ +KP +++ + +CS+ + + A L ++ E L P+ YNAL+
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLF---------GFVNSPYEHSNMLSQLHVAKR 422
E AV V M+ KL P+ RTY L + G +N E + +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 423 INAIERD------------MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFV 470
I+ R M + G+ + +++++L + + + E + F E+ V
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 471 YGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYK 530
NP++ +Y ++ +A K A + ++M P+S T+N ++ K
Sbjct: 529 --NPNVV--MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 531 SASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
A+LL M++ G P T T LI LL+D F+ A + ++ G + D + TF+
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 591 RQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+ C + R+ E ++ M + V P+ T + Y + G N A + L+
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 155/369 (42%), Gaps = 21/369 (5%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++N +++G K N A + + ++ G+ P TY +I + + V
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRI--SECL-SPHPYNALLASCNVLNQ 371
M + + L A ++D A ++ EC + Y L+ S +
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A+ + +M++ + P+I TY +L ++ SQ K + + M
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLID------------SLCSQCKFEKARELLGQ-ML 385
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
G+ + ++ L+N + MI + ++ + E + N T YN ++ ++
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN----TRTYNELIKGYCKS 441
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+ A+ + +M PD TYN ++D ++ SA L+S+M +G P TY
Sbjct: 442 NVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
T++I L + ++ EA +L + G+ +V+++ + C ++D L++E M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 612 EKVRPNPVT 620
+ PN +T
Sbjct: 561 KNCLPNSLT 569
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 18/300 (6%)
Query: 353 CLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSN 412
C + + YN ++ L E A Q +K+ + L PD TY L + G+ + +
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL--IMGYC----QRKD 268
Query: 413 MLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG 472
+ S V +M G + + ++ +L++ L R I E ++ F + +
Sbjct: 269 LDSAFKVF-------NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF- 320
Query: 473 NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSA 532
P++ T Y V++ L +++ A+N+ K M+ G P+ TY +++D ++ A
Sbjct: 321 -PTVRT--YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 533 SLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQ 592
L+ M+ +G P TY ALI + +A++++E + + +N ++
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 593 ACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
C K + ++ M + KV P+ VT + SG ++A L +++ R + D
Sbjct: 438 YC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%)
Query: 497 AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIK 556
A +F M L G + Y ++ + R A L M P TYT LIK
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 557 ILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRP 616
L E+ +EALNL++ GI+ ++ + + C + + + ++ M ++ + P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 617 NPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILRE 658
N +T + + Y G A++ ++++ R +S + E
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 171/417 (41%), Gaps = 34/417 (8%)
Query: 212 VRKGVQPLGLAHQTISTG-NKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNY 270
+R+G+ P + + T+ G K+ I + H + + ++ +I G + +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 271 MLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL 330
+ A KL +M G++P S T+ +I + +D V M Q P T TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 331 SVICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKL 387
K LD A L + + L P+ YN+++ E AV++ + + L
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 388 LPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLN 447
D TY L Y S + + I ++M G+Q + ++ L+N
Sbjct: 523 NADTVTYTTLMD-------AYCKSGEMD------KAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 448 ALGEERMIRELIEYFYVAEKLFVY----GNPSLATDIYNVVLHHLVEAQKGQIAINIFKR 503
M+ + EKL + G AT ++V + + + A I+K
Sbjct: 570 GFCLHGMLED-------GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAIYKD 621
Query: 504 MKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
M G PD +TY +V R+ K A L M +GFS TY+ LIK L+ +K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII-----ELIVEYMHQEKVR 615
F EA + ++ R +G+ D +F+ F +R D I E+I Y+ E++R
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 738
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 157/405 (38%), Gaps = 28/405 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S+N VIH + A L++ M++ G P +Y ++ ++++M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 316 QQENLKP----LNSTLATLSVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVL 369
+++ LKP S + L IC A + E+F + I + + P Y L+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLA---EAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
A + F +M + PD+ TY + S F + E + +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE------------- 411
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHL 488
M G++ ++ L+N + +++ F V + G +P++ T Y ++ L
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVT--YTTLIDGL 466
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ A + M G P+ TYN +V+ + + A L+ G + T
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TYT L+ + + ++A +L+ G+Q ++ FN + C ++ E ++ +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
M + + PN T + Y A + + R + DG
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 171/417 (41%), Gaps = 34/417 (8%)
Query: 212 VRKGVQPLGLAHQTISTG-NKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNY 270
+R+G+ P + + T+ G K+ I + H + + ++ +I G + +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 271 MLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL 330
+ A KL +M G++P S T+ +I + +D V M Q P T TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 331 SVICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKL 387
K LD A L + + L P+ YN+++ E AV++ + + L
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 388 LPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLN 447
D TY L Y S + + I ++M G+Q + ++ L+N
Sbjct: 523 NADTVTYTTLMD-------AYCKSGEMD------KAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 448 ALGEERMIRELIEYFYVAEKLFVY----GNPSLATDIYNVVLHHLVEAQKGQIAINIFKR 503
M+ + EKL + G AT ++V + + + A I+K
Sbjct: 570 GFCLHGMLED-------GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAIYKD 621
Query: 504 MKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
M G PD +TY +V R+ K A L M +GFS TY+ LIK L+ +K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII-----ELIVEYMHQEKVR 615
F EA + ++ R +G+ D +F+ F +R D I E+I Y+ E++R
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 738
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 157/405 (38%), Gaps = 28/405 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S+N VIH + A L++ M++ G P +Y ++ ++++M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 316 QQENLKP----LNSTLATLSVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVL 369
+++ LKP S + L IC A + E+F + I + + P Y L+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLA---EAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
A + F +M + PD+ TY + S F + E + +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE------------- 411
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHL 488
M G++ ++ L+N + +++ F V + G +P++ T Y ++ L
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVT--YTTLIDGL 466
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ A + M G P+ TYN +V+ + + A L+ G + T
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TYT L+ + + ++A +L+ G+Q ++ FN + C ++ E ++ +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
M + + PN T + Y A + + R + DG
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 33/388 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++G K + LA L+ +M+ ++P Y+ II + D L + K M
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ + ++P T ++L S +C+ D + D I ++P ++AL+ + +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A +++ +M + + P I TY L + GF M +L AK++ M +
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLIN--GFC--------MHDRLDEAKQMFEF---MVS 389
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
++ L+ + + + E +E F + + GN T YN+++ L +A
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN----TVTYNILIQGLFQAG 445
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+A IFK M G P+ TYN ++D + A ++ + R P TY
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I+ + + K + +L L G++ DV+ +NT + C K + + + + M ++
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEA 640
P NSG +NT I A
Sbjct: 566 GTLP-------------NSGCYNTLIRA 580
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 145/352 (41%), Gaps = 31/352 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+N +I G K K+ A L +M+ G++P+ TY +I + D +L M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSPH--PYNALLASCNVLNQPE 373
+ + P T + L K +L AE D + + P Y++L+ + ++ +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNML 414
A Q+F M PD+ TY L F G V + ++ ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 415 SQLHVAKRIN---AIERDMANNGVQHSHLSMKNLLNALGEE-RMIRELIEYFYVAEKLFV 470
L A + I ++M ++GV + ++ LL+ L + ++ + ++ + Y+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM- 497
Query: 471 YGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYK 530
P++ T YN+++ + +A K + ++F + L G PD YN M+ S +
Sbjct: 498 --EPTIYT--YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 531 SASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
A L M G P + Y LI+ L+D + L++ R G D
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 167/408 (40%), Gaps = 36/408 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM + G +P++ T++ +I + + + ++ M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 316 QQENLKPLNSTLATLSVICS---KALQLDLAESFLDRISEC-LSPHP--YNALLASCNVL 369
+ +P L T V+ + K DLA + L+++ + L P YN ++
Sbjct: 213 VAKGCQP---DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
+ A+ +F +M+ + P++ TY L S + S +LS D
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS-------------D 316
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-----NPSLATDIYNVV 484
M + + L++A +E + E AEKL+ +PS+ T Y+ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVE-------AEKLYDEMVKRSIDPSIVT--YSSL 367
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
++ + A +F+ M PD TYN ++ + + + M ++G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
T TY LI+ L Q + A + + DG+ +++ +NT L C +++ +
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 605 IVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ EY+ + K+ P T + +G + LSL+ + D
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 21/282 (7%)
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ AV +F +M + + P I + L S +++++ + ++ M N
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLS-------------AIAKMNKFDVVISLGEQMQN 109
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEA 491
G+ H+H + L+N +L V K+ G P++ T + +L+ +
Sbjct: 110 LGIPHNHYTYSILINCFCRRS---QLPLALAVLGKMMKLGYEPNIVT--LSSLLNGYCHS 164
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
++ A+ + +M + GY P++ T+N ++ + A LI M+ +G P TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC-YKRRIDIIELIVEYMH 610
++ L + + A NLL + ++ VL++NT + C YK D + L E M
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE-ME 283
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ +RPN VT + S N G + A L + R ++ D
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 150/358 (41%), Gaps = 53/358 (14%)
Query: 330 LSVICSKALQLDLAESFLDRISECLSPH---PYNALLASCNVLNQPERAVQVFAKMKQIK 386
LS I +K + D+ S +++ PH Y+ L+ +Q A+ V KM ++
Sbjct: 88 LSAI-AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 387 LLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLL 446
P+I T L + Y HS +S+ A+ M G Q + ++ L+
Sbjct: 147 YEPNIVTLSSLLN-------GYCHSKRISEAV------ALVDQMFVTGYQPNTVTFNTLI 193
Query: 447 NAL------GE-----ERMIR-----ELIEYFYVAEKLFVYGNPSLATD----------- 479
+ L E +RM+ +L+ Y V L G+ LA +
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 480 ----IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
IYN ++ L + + A+N+FK M+ G P+ TY+ ++ C + AS L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+S MI + +P T++ALI +++ K EA L + I ++ +++ + C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
R+D + + E+M + P+ VT + + + E ++V R MS+ G
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK---YKRVEEGMEV--FREMSQRG 426
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 32/317 (10%)
Query: 292 YDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL--SVICSKALQLDLAESFLDR 349
Y+ ++ S F ++ M+Q P + TL + + S L +LA LD
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 350 I-SECLSPHP--YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNS 406
+ + L P YN LL++C+ + + AV+VF M+ + PD+ TY + S++G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 407 PYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAE 466
E + +L + G ++ +LL A ER ++ E + +
Sbjct: 348 AAEAERLFMELEL-------------KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 467 KLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMK-LCGYHPDSETYNIMVDCCSI 525
K+ +G + YN ++H + + +A+ ++K MK L G +PD+ TY +++D
Sbjct: 395 KMG-FGKDEMT---YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 526 LRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALN-----LLERTRLD--- 577
A+ L+S M+ G P TY+ALI + K EA + L T+ D
Sbjct: 451 ANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA 510
Query: 578 -GIQLDVLLFNTFLRQA 593
+ LDVLL R+A
Sbjct: 511 YSVMLDVLLRGNETRKA 527
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 174/410 (42%), Gaps = 57/410 (13%)
Query: 256 SFNDVIHGCAKEKNYM--LAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
SFN +I+ K LA +L+ ++ G++P + TY+ ++ A S SN + V +
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 314 IMQQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVLN 370
M+ +P L + A +SV L + F++ + P YN+LL +
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
E+ +V+ +M+++ D TY + ++G QL +A ++ +DM
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG----------KQGQLDLALQLY---KDM 428
Query: 431 AN-NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
+G ++ L+++LG+ R + ++E L V P+L T Y+ ++
Sbjct: 429 KGLSGRNPDAITYTVLIDSLGKAN--RTVEAAALMSEMLDVGIKPTLQT--YSALICGYA 484
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+A K + A + F M G PD+ Y++M+D + A L MI G +P
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE-- 607
Y +I L L++ R D IQ + + + C ++I ++V+
Sbjct: 545 LYELMI------------LGLMKENRSDDIQKTI----RDMEELCGMNPLEISSVLVKGE 588
Query: 608 ----YMHQEKVRPNPVTCGY---------VFSAYVNSGFHNTAIEALQVL 644
Q KV +T GY + +Y +SG H+ A E L+ L
Sbjct: 589 CFDLAARQLKV---AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFL 635
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 149/396 (37%), Gaps = 66/396 (16%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+ D+I K+K + A+ ++ ++ G P T++ ++ A + + + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 317 QENLKP-LNSTLATLSVICSKALQLDL---AESFLD---RISECLSPHPYNALLASCNVL 369
++ P + S L +C +L E D +IS+ +A + N+
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
++++ MK LP IR Y ++ L L KR+ RD
Sbjct: 875 E----VKKIYSSMKAAGYLPTIRLYRMMIEL----------------LCKGKRV----RD 910
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
E M+ E+ E + E LA I+N +L
Sbjct: 911 A---------------------EIMVSEMEEANFKVE---------LA--IWNSMLKMYT 938
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ + + +++R+K G PD TYN ++ R + LL+ M G P
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
TY +LI + + +A L E G++LD ++T ++ + E +++ M
Sbjct: 999 TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Query: 610 HQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLS 645
+ P T + +Y +SG EA +VLS
Sbjct: 1059 KNAGIEPTLATMHLLMVSYSSSG---NPQEAEKVLS 1091
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 113/248 (45%), Gaps = 18/248 (7%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
+N++L + ++ VQV+ ++K+ L PD TY L ++ P E ++ Q
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ-- 987
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT 478
M N G+ + K+L++A G+++ + + + F E+L G L
Sbjct: 988 -----------MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF---EELLSKG-LKLDR 1032
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
Y+ ++ ++ A + + MK G P T ++++ S + + A ++S
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN 1092
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY-KR 597
+ T Y+++I L+ + +N + L + +G++ D ++ F+R A + K
Sbjct: 1093 LKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKE 1152
Query: 598 RIDIIELI 605
+I+++ L+
Sbjct: 1153 KIEVMLLL 1160
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 166/391 (42%), Gaps = 20/391 (5%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++ V++G K + LA L+ +M+ ++ Y II A N D L +
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 315 MQQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQ 371
M + ++P T +L +C+ D + D I ++P+ ++AL+ + +
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A +++ +M + + PDI TY L + F + E +M + I +D
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--------ISKDCF 392
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
N V ++ L+ + + + E +E F + + GN T YN ++ L +A
Sbjct: 393 PNVVTYN-----TLIKGFCKAKRVEEGMELFREMSQRGLVGN----TVTYNTLIQGLFQA 443
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+A IFK+M G PD TY+I++D + A ++ + + P TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
+I+ + + K + +L L G++ +V+++ T + C K + + + M +
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 612 EKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+ PN T + A + G + E ++
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 122/314 (38%), Gaps = 28/314 (8%)
Query: 357 HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ 416
+ YN L+ +Q A+ V KM ++ PDI T L + + E ++ Q
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 417 LHV-----------------------AKRINAIERDMANNGVQHSHLSMKNLLNALGEER 453
+ V ++ + I+R M G Q + ++N L +
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR-MVARGCQPDLFTYGTVVNGLCKRG 234
Query: 454 MIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDS 513
I + EK G IY ++ L + A+N+F M G P+
Sbjct: 235 DIDLALSLLKKMEK----GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 514 ETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
TYN ++ C + AS L+S MI + +P T++ALI +++ K EA L +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGF 633
I D+ +++ + C R+D + + E M + PN VT + + +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 634 HNTAIEALQVLSLR 647
+E + +S R
Sbjct: 411 VEEGMELFREMSQR 424
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 161/402 (40%), Gaps = 40/402 (9%)
Query: 212 VRKGVQPLGLAHQTISTGNKKVKIAKLD-ELSRRKHLQLMKVLR--WSFNDVIHGCAKEK 268
V +G QP + T+ G K +D LS K ++ K+ + +I K
Sbjct: 212 VARGCQPDLFTYGTVVNG--LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 269 NYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLA 328
N A L +M G++P+ TY+ +I+ + D +L M + + P T +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 329 TLSVICSKALQLDLAESFLDR-ISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQI 385
L K +L AE D I + P Y++L+ + ++ + A +F M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 386 KLLPDIRTYELLFSLF-------------------GFVNSPYEHSNMLSQLHVAKRIN-- 424
P++ TY L F G V + ++ ++ L A +
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 425 -AIERDMANNGVQHSHLSMKNLLNALGE-ERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
I + M ++GV ++ LL+ L + ++ + L+ + Y+ + P + T YN
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM---EPDIYT--YN 504
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD--CCSILRSYKSASLLISMMI 540
+++ + +A K + ++F + L G P+ Y M+ C L+ + A L M
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK--EEADALFREMK 562
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
G P + TY LI+ L+D + L++ R G D
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 21/262 (8%)
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ AV +F +M Q + LP I + L S +++++ + ++ M N
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLS-------------AIAKMNKFDLVISLGERMQN 108
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEA 491
+ + S L+N +L V K+ G P + T + +L+
Sbjct: 109 LRISYDLYSYNILINCFCRRS---QLPLALAVLGKMMKLGYEPDIVT--LSSLLNGYCHG 163
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
++ A+ + +M + Y P++ T+N ++ + A LI M+ +G P TY
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC-YKRRIDIIELIVEYMH 610
++ L + + AL+LL++ I+ DV+++ T + C YK D + L E M
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE-MD 282
Query: 611 QEKVRPNPVTCGYVFSAYVNSG 632
+ +RPN VT + N G
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYG 304
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 14/266 (5%)
Query: 381 KMKQIKLLPDIRTYELLFSLFG--FVNSPYEHSNMLSQ--LHVAKRINAIE--RDMANNG 434
KM K +R LFSL G F + Y++ LS+ L K +A++ +M +
Sbjct: 16 KMSLAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSR 75
Query: 435 VQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIY--NVVLHHLVEAQ 492
S + LL+A+ + +I + E++ N ++ D+Y N++++
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVIS---LGERM---QNLRISYDLYSYNILINCFCRRS 129
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ +A+ + +M GY PD T + +++ + A L+ M + P T T+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
LI L K +EA+ L++R G Q D+ + T + C + ID+ +++ M +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAI 638
K+ + V + A N N A+
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDAL 275
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 149/401 (37%), Gaps = 57/401 (14%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM ++ +P++ T++ +I + + + ++ M
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP---YNALL-ASCNVLNQ 371
+P T T+ K +DLA S L ++ + Y ++ A CN N
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ A+ +F +M + P++ TY L + S +LS + IER +
Sbjct: 272 ND-ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--------IERKIN 322
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
N V S L ++A +E LVEA
Sbjct: 323 PNVVTFSAL-----IDAFVKE---------------------------------GKLVEA 344
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+K ++ M PD TY+ +++ + A + +MI + P TY
Sbjct: 345 EK------LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
LIK + ++ E + L G+ + + +NT ++ D+ + I + M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 612 EKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ V P+ +T + G A+ + L M D
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 153/399 (38%), Gaps = 89/399 (22%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
++FN +I+ KE AK + M++ G+KP+ TY+ ++Q S + ++
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLA-SCNVLNQPE 373
M+ SK Q D+ YN +L+ CN
Sbjct: 286 MK------------------SKGFQPDM--------------QTYNPILSWMCN----EG 309
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
RA +V +MK+I L+PD +Y +L R +NN
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILI-----------------------------RGCSNN 340
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G L M A +E + + ++ FY YN ++H L K
Sbjct: 341 G----DLEMAF---AYRDEMVKQGMVPTFYT----------------YNTLIHGLFMENK 377
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
+ A + + ++ G DS TYNI+++ K A L M+ G P TYT+
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
LI +L + K EA L E+ G++ D+++ NT + C +D +++ M
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 614 VRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ P+ VT + G A E + + R + D
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 153/363 (42%), Gaps = 60/363 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N ++ G + A+ +I +MK G +P TY+ I+ S+ N VL+ M
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL---SWMCNEGRASEVLREM 318
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSP--HPYNALLASCNVLNQP 372
++ L P + + L CS L++A ++ D + + + P + YN L+ + N+
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E A + ++++ ++ D TY +L +N +H + AK+ A+ +M
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNIL------INGYCQHGD-------AKKAFALHDEMMT 425
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-------------------- 472
+G+Q + + +L+ L + RE E F EK+ G
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELF---EKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 473 ----------------NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETY 516
NP T YN ++ L K + A + MK G PD +Y
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVT--YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
N ++ S K A ++ M+ GF+P TY AL+K L ++++ A LL +
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 577 DGI 579
+GI
Sbjct: 601 EGI 603
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 203/502 (40%), Gaps = 63/502 (12%)
Query: 56 CVESKSIIQASKCLELM-EKQMVGKNEATYSELLKLAVLQRSLPTALLIWQEYNKHHSKS 114
C + + + +A +C LM EK K E L L+ L R + A + + + + KS
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR-IENAWVFYADMYRMEIKS 223
Query: 115 -IIALHKFIWTFIRLGDLKSAYEALQQMVSLPMTGNIAG--------TVYGKFYSTILDI 165
+ + I + G LK A L M + I ++ G+ L I
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 166 PVPSNKKLGPTM------LDFMGDKQLDSCI---HPSIMYLPDAISASIEKGQPGVRKGV 216
+K P M L +M ++ S + I +PD++S +I
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNI----------- 332
Query: 217 QPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKL 276
L + G+ ++ A DE+ + Q M +++N +IHG E A+ L
Sbjct: 333 ----LIRGCSNNGDLEMAFAYRDEMVK----QGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 277 IVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL-SVICS 335
I +++ G+ S TY+ +I + + + M + ++P T +L V+C
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 336 KALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRT 393
K + E F + + + P N L+ + +RA + +M + + PD T
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 394 YE-LLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEE 452
Y L+ L G +E + L +M G++ H+S L++ ++
Sbjct: 505 YNCLMRGLCG--EGKFEEARELMG------------EMKRRGIKPDHISYNTLISGYSKK 550
Query: 453 RMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
+ F V +++ G NP+L T YN +L L + Q+G++A + + MK G P
Sbjct: 551 GDTKHA---FMVRDEMLSLGFNPTLLT--YNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 512 DSETYNIMVDCCSILRSYKSAS 533
+ ++ +++ S L + KS S
Sbjct: 606 NDSSFCSVIEAMSNLDAKKSDS 627
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 497 AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIK 556
AI F MK G++P +ET N ++ S L ++A + + M R T+ +I
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233
Query: 557 ILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRP 616
+L ++ K +A L + GI+ ++ +NT ++ + RI+ LI+ M + +P
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 617 NPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNIL 656
+ T + S N G + + ++ + L S NIL
Sbjct: 294 DMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 153/348 (43%), Gaps = 30/348 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ ++ ++K++ LI +++ G+KP + ++ II A+S N + + + M
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM 415
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI--SECLSPHPYNALLASCNVLNQP- 372
++ KP ST TL K +L+ + LD + E L P+ +CN+L Q
Sbjct: 416 KESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND-----RTCNILVQAW 470
Query: 373 ------ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAI 426
E A + KM+ + PD+ T+ L + + S +M+ I
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI-----------I 519
Query: 427 ERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLH 486
R M +N V+ + + ++N EE + E + +FY ++L V+ P+L ++N ++
Sbjct: 520 PR-MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH--PNLF--VFNSLIK 574
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+ + M+ G PD T++ +++ S + K + + M+ G P
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC 594
++ L K + + +A +L + R G++ +V+++ + C
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 484 VLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG 543
+++ L+E + Q A +IF + G+ P TY +V + + + S LIS + + G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIE 603
P T + A+I + ++A+ + E+ + G + FNT ++ +++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 604 LIVEYM-HQEKVRPNPVTCGYVFSAYVN 630
+++ M E ++PN TC + A+ N
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCN 472
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 168/390 (43%), Gaps = 20/390 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++G K + LA L+ +M+ ++P Y+ II A N D L + M
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ ++P T +L +C+ D + D I ++P+ ++AL+ + +
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A +++ +M + + PDI TY L + F + E +M + I +D
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--------ISKDCFP 394
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
N V ++ L+ + + + E +E F + + GN T Y ++H +A+
Sbjct: 395 NVVTYN-----TLIKGFCKAKRVDEGMELFREMSQRGLVGN----TVTYTTLIHGFFQAR 445
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A +FK+M G PD TY+I++D ++A ++ + R P TY
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I+ + + K + +L L G++ +V+ + T + C K + + + M +E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
P+ T + A++ G + E ++
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 173/402 (43%), Gaps = 25/402 (6%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
++FN +IHG + A L+ +M + G +P TY ++ + + L +LK
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 315 MQQENLKPLNSTLAT-LSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQ 371
M+Q ++P T + +C+ D F + ++ + P+ YN+L+ +
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A ++ + M + K+ P++ T+ L F E + ++ KR +I+ D+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKR--SIDPDIF 362
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
+ M + L+ E + + EL+ +++ F P++ T YN ++ +A
Sbjct: 363 TYSSLINGFCMHDRLD---EAKHMFELM----ISKDCF----PNVVT--YNTLIKGFCKA 409
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
++ + +F+ M G ++ TY ++ R +A ++ M+ G P TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
+ L+ L + K AL + E + ++ D+ +N + C +++ + +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 612 EKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
+ V+PN VT + S + G A +AL R M E+G
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEA-DAL----FREMKEEG 566
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 44/322 (13%)
Query: 357 HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ 416
+ Y+ L+ +Q A+ V AKM ++ PDI T L + F N + +++ Q
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 417 LHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE-----------ERMI-----RELIE 460
M G Q + L++ L +RM+ +L+
Sbjct: 177 -------------MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 461 YFYVAEKLFVYGNPSLATD---------------IYNVVLHHLVEAQKGQIAINIFKRMK 505
Y V L G+ LA IYN ++ L + A+N+F M
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 506 LCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFN 565
G P+ TYN ++ C + AS L+S MI + +P T++ALI +++ K
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 566 EALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVF 625
EA L + I D+ +++ + C R+D + + E M + PN VT +
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 626 SAYVNSGFHNTAIEALQVLSLR 647
+ + + +E + +S R
Sbjct: 404 KGFCKAKRVDEGMELFREMSQR 425
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 172/414 (41%), Gaps = 30/414 (7%)
Query: 195 MYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLD-ELSRRKHLQLMKVL 253
++L +S ++ V G QP + + +I G + L +L R+ + +K
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
++++ +I ++ A L +M+ G+K S TY+ +++ + DG +LK
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 314 IMQQENLKPLNSTLATLSVICSKALQLDLA-ESFLDRISECLSPH--PYNALLASCNVLN 370
M + P T L + K +L A E + + I+ +SP+ YN L+ + N
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHS 411
+ A + M + K PDI T+ L + G V + +S
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 412 NMLSQLHVAKRINAIE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL 468
++ + +I E ++M ++GV ++ LL+ L + + + +E F +K
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK- 466
Query: 469 FVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS 528
L +Y ++ + + K + A N+F + G P+ TY +M+ S
Sbjct: 467 ---SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
A++L+ M G +P CTY LI+ L+D + L+E + G D
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
P++ T +NV+L V+ K Q A ++K M G P+ TYN ++D + A+
Sbjct: 296 PNVIT--FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
++ +M+R SP T+T+LIK ++ ++ + + G+ + + ++ ++
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
C +I + E + + M V P+ +T G + ++G A+E + L
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 375 AVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNG 434
A V K+ ++ PD T+ L + + V++ + ++R M NG
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIK------------GLFLEGKVSEAVVLVDR-MVENG 188
Query: 435 VQHSHLSMKNLLNAL---GEERMIRELI---EYFYVAEKLFVYGNPSLATDIYNVVLHHL 488
Q ++ +++N + G+ + +L+ E V +F Y +T I ++
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY-----STIIDSLCRDGC 243
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
++A AI++FK M+ G TYN +V + +LL+ M+ + P
Sbjct: 244 IDA-----AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
T+ L+ + +++ K EA L + GI +++ +NT + C + R+ +++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 609 MHQEKVRPNPVTC-----GYVFSAYVNSG---FHNTAIEAL 641
M + K P+ VT GY V+ G F N + L
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 156/402 (38%), Gaps = 25/402 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+FN +I G E A L+ +M G +P TY+ I+ + L +L+ M
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQP 372
++ N+K T +T+ + +D A S + S YN+L+ +
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ M +++P++ T+ +L +F E N + ++M
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA-------------NELYKEMIT 326
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
G+ + ++ L++ + + E L V S + ++ +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ + +F+ + G ++ TY+I+V K A L M+ G P TY
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
L+ L + K +AL + E + + L ++++ T + C +++ + + +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGN 654
V+PN +T + S G ++ +L LR M EDGN
Sbjct: 503 GVKPNVMTYTVMISGLCKKG----SLSEANIL-LRKMEEDGN 539
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSA 532
PSL ++ + ++ + ++ K+++L G + T NIM++C C ++ +
Sbjct: 86 PSLVD--FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAY 143
Query: 533 SLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQ 592
S+L +M + G+ P T T+ LIK L + K +EA+ L++R +G Q DV+ +N+ +
Sbjct: 144 SVLGKVM-KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 593 ACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAI 638
C + ++ M + V+ + T + + G + AI
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 475 SLATDIY--NVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSA 532
+A +IY N++++ K A ++ ++ GY PD+ T+N ++ + A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 533 SLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQ 592
+L+ M+ G P TY +++ + + + AL+LL + ++ DV ++T +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 593 ACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHN 635
C ID + + M + ++ + VT + +G N
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 163/397 (41%), Gaps = 23/397 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F V+ G +E + A ++ QM G S+ + + I+ + D L ++ M
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 316 -QQENLKPLNSTLATLSVICSKALQLDLAESFLD-RISECLSP--HPYNALLASCNVLNQ 371
Q+ P T TL KA + A +D + E P + YN++++ L +
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ AV+V +M P+ TY L S L + + + + R +
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLIS-------------TLCKENQVEEATELARVLT 392
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVE 490
+ G+ + +L+ L R R +E F E++ G P T YN+++ L
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELF---EEMRSKGCEPDEFT--YNMLIDSLCS 447
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
K A+N+ K+M+L G TYN ++D + A + M G S + T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y LI L + + +A L+++ ++G + D +N+ L C I IV+ M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
P+ VT G + S +G A + L+ + ++
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 153/367 (41%), Gaps = 21/367 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKIL-GVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
S N ++HG KE A I +M G P T++ ++ + + + ++ +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 315 MQQENLKPLNSTL-ATLSVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVLNQ 371
M QE P T + +S +C + E I+ SP+ YN L+++ NQ
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
E A ++ + +LPD+ T+ NS + + VA + +M
Sbjct: 381 VEEATELARVLTSKGILPDVCTF----------NSLIQGLCLTRNHRVAMELF---EEMR 427
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
+ G + + L+++L + + E + K + + YN ++ +A
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNML----KQMELSGCARSVITYNTLIDGFCKA 483
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
K + A IF M++ G +S TYN ++D R + A+ L+ MI +G P TY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
+L+ + +A ++++ +G + D++ + T + C R+++ ++ +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 612 EKVRPNP 618
+ + P
Sbjct: 604 KGINLTP 610
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 167/395 (42%), Gaps = 23/395 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+FN +I + A ++ M G+ P T+ ++Q + + L + + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRIS--ECLSPHPY--NALLASCNVLNQ 371
+ N ++ + K +++ A +F+ +S + P Y N L+
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ A+++ M Q PD+ TY + S + E +L Q+ I RD +
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM--------ITRDCS 362
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
N V ++ L++ L +E + E E V + P + T +N ++ L
Sbjct: 363 PNTVTYN-----TLISTLCKENQVEEATELARVLTSKGIL--PDVCT--FNSLIQGLCLT 413
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMMIRQGFSPVTCT 550
+ ++A+ +F+ M+ G PD TYN+++D CS + ++ ++L M + G + T
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL-SGCARSVIT 472
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y LI + K EA + + + G+ + + +NT + C RR++ +++ M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLS 645
E +P+ T + + + G A + +Q ++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 22/291 (7%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
+N L+ + +Q A+ + M L+PD +T+ + G++ E ++ L
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ--GYI----EEGDLDGALR 245
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRE---LIEYFYVAEKLFVYGNPS 475
+ ++ M G S++S+ +++ +E + + I+ + F P
Sbjct: 246 IREQ-------MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF----PD 294
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
T +N +++ L +A + AI I M GY PD TYN ++ L K A +
Sbjct: 295 QYT--FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ MI + SP T TY LI L ++ + EA L GI DV FN+ ++ C
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
R + + E M + P+ T + + + G + A+ L+ + L
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 35/346 (10%)
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
+++FN +++G K + A +++ M G P TY+ +I ++ + VL
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 314 IMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRI--SECLSPH--PYNALLASCNVL 369
M + P T TL K Q++ A L R+ S+ + P +N+L+ +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVA--------- 420
A+++F +M+ PD TY +L E NML Q+ ++
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 421 -------------KRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
+ I +M +GV + ++ L++ L + R + + + + ++
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ---LMDQ 530
Query: 468 LFVYGN-PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD-CCSI 525
+ + G P T YN +L H + A +I + M G PD TY ++ C
Sbjct: 531 MIMEGQKPDKYT--YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 526 LRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
R ++ LL S+ ++ G + Y +I+ L + K EA+NL
Sbjct: 589 GRVEVASKLLRSIQMK-GINLTPHAYNPVIQGLFRKRKTTEAINLF 633
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 139/344 (40%), Gaps = 29/344 (8%)
Query: 212 VRKGVQPLGLAHQT-ISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNY 270
+ + P + + T IST K+ ++ + EL+R + + +FN +I G +N+
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 271 MLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL 330
+A +L +M+ G +P TY+ +I + + + L +LK M+ T TL
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 331 SVICSKALQLDLAESFLDRI---SECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKL 387
KA + AE D + + YN L+ + E A Q+ +M
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 388 LPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLN 447
PD TY L + F + K+ I + M +NG + ++ L++
Sbjct: 537 KPDKYTYNSLLTHF-------------CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 448 ALGEERMIRELIEYFYVAEKLF---VYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM 504
L + + VA KL +L YN V+ L +K AIN+F+ M
Sbjct: 584 GLCKAGRVE-------VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 505 -KLCGYHPDSETYNIMV-DCCSILRSYKSASLLISMMIRQGFSP 546
+ PD+ +Y I+ C+ + A + ++ +GF P
Sbjct: 637 LEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T YN +L+ LV+ ++ +M + G PD T+N+++ + A L++
Sbjct: 154 THFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLE 213
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
M G P T+T +++ +++ + AL + E+ G + N + C +
Sbjct: 214 DMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
Query: 598 RI-DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
R+ D + I E +Q+ P+ T + + +G AIE + V+
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 148/363 (40%), Gaps = 24/363 (6%)
Query: 287 PSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESF 346
P TY +I+A S + +L M+ P T L K +LD A F
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 347 L-DRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGF 403
L D S P+ +N +L S + A ++ A M + P + T+ +L
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI----- 351
Query: 404 VNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFY 463
N L + + R I M +G Q + LS LL+ +E+ + IEY
Sbjct: 352 --------NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL- 402
Query: 464 VAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC 522
E++ G P + T YN +L L + K + A+ I ++ G P TYN ++D
Sbjct: 403 --ERMVSRGCYPDIVT--YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
+ A L+ M + P T TY++L+ L ++ K +EA+ GI+ +
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 583 VLLFNTFLRQACYKRRID-IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
+ FN+ + C R+ D I+ +V +M +PN + + G A+E L
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLV-FMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 642 QVL 644
L
Sbjct: 578 NEL 580
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 54/341 (15%)
Query: 306 RDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLAS 365
R +L+I++ P T + KA +++ A S LDR+S YN +L S
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 366 CNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA 425
+ ++A++V +M Q PD+ TY +L
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL---------------------------- 245
Query: 426 IERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVL 485
IE ++GV H+ MK LL+ + + P + T YNV++
Sbjct: 246 IEATCRDSGVGHA---MK-LLDEMRDRGC------------------TPDVVT--YNVLV 281
Query: 486 HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMV-DCCSILRSYKSASLLISMMIRQGF 544
+ + + + AI M G P+ T+NI++ CS R + A L++ M+R+GF
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR-WMDAEKLLADMLRKGF 340
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
SP T+ LI L + A+++LE+ G Q + L +N L C ++++D
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 605 IVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLS 645
+E M P+ VT + +A G A+E L LS
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 166/410 (40%), Gaps = 33/410 (8%)
Query: 244 RKHLQLMKVLRWS--------FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGI 295
RK +++++L S +N +I G K A ++ +M V P TY+ I
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTI 210
Query: 296 IQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE-CL 354
+++ + + VL M Q + P T L + + A LD + +
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 355 SPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSN 412
+P YN L+ + + A++ M P++ T+ ++ +
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 413 MLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG 472
+L+ DM G S ++ L+N L + ++ I+ + EK+ +G
Sbjct: 331 LLA-------------DMLRKGFSPSVVTFNILINFLCRKGLLGRAID---ILEKMPQHG 374
Query: 473 -NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKS 531
P+ + YN +LH + +K AI +RM G +PD TYN M+ +
Sbjct: 375 CQPNSLS--YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 532 ASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLR 591
A +++ + +G SPV TY +I L + K +A+ LL+ R ++ D + +++ +
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 592 QACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
+ ++D + +RPN VT + S + AI+ L
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 173/421 (41%), Gaps = 40/421 (9%)
Query: 212 VRKGVQPLGLAHQTISTGNKKVKIAK--LDELSR--RKHLQLMKVLRWSFNDVIHGCAKE 267
V KG+ + + TI G K+ K L+ LS+ H++ V+ ++ +I K+
Sbjct: 253 VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI---YSAIIDRLCKD 309
Query: 268 KNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTL 327
++ A+ L +M G+ P+ TY+ +I + D +L+ M + + P T
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 328 ATLSVICSKALQLDLAESFLDR-ISECLSPHP--YNALLASCNVLNQPERAVQVFAKMKQ 384
L K +L AE D + C+ P YN+++ N+ + A +F M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 385 IKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNMLSQLHVAKRINA 425
PD+ T+ + ++ G V + ++ ++ +NA
Sbjct: 430 ----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 426 IE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
+ ++M ++GV ++ LL E + E +E F V + L T YN
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ----MSKIDLDTVAYN 541
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+++H + + K A ++F + + G PD +TYN+M+ + A++L M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII 602
G P TY LI+ L+ + ++++ L+ R +G D C +II
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEII 661
Query: 603 E 603
E
Sbjct: 662 E 662
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 36/304 (11%)
Query: 348 DRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSP 407
DRISE L+ Y + L AV +F +M +I L P + T+ L +
Sbjct: 190 DRISEALALFGY---MVETGFL----EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 408 YEHSNMLSQLHVAK--RINAIERDMANNGV--QHSHLSMKNLLNALGEERMIRELIEYFY 463
E + +++++ V K I+ + NG+ S NLL+ + E + +++ Y
Sbjct: 243 LEAAALVNKM-VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 464 VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
+ ++L G+ S A +++ +L +KG IA N+F TYN M+D
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEML------EKG-IAPNVF-------------TYNCMIDGF 341
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
+ A L+ MI + +P T+ ALI +++ K EA L + I D
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQV 643
+ +N+ + C R D + + + M P+ VT + Y + + ++ L+
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 644 LSLR 647
+S R
Sbjct: 458 ISRR 461
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/440 (17%), Positives = 171/440 (38%), Gaps = 59/440 (13%)
Query: 241 LSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAAS 300
L R+ ++ + + +SFN +I + ++ LG +P T++ ++
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 301 FQ---------------SNFRDGLGVLKIMQQENLKPLNSTLATL-SVICSKALQLDLAE 344
+ + F + + + M + L P+ T TL + +C + L+ A
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 345 SFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFG 402
+ + L Y ++ + + A+ + +KM++ + PD+ Y +
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 403 FVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE----ERMIREL 458
+ + S++ +E+ +A N ++ M + + G +R++R++
Sbjct: 308 KDGHHSDAQYLFSEM--------LEKGIAPNVFTYN--CMIDGFCSFGRWSDAQRLLRDM 357
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCG------YHPD 512
IE NP + T +N ++ V+ K +F+ KLC PD
Sbjct: 358 IEREI---------NPDVLT--FNALISASVKEGK------LFEAEKLCDEMLHRCIFPD 400
Query: 513 SETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE 572
+ TYN M+ + A + +M SP T+ +I + + ++ +E + LL
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 573 RTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
G+ + +NT + C ++ + + + M V P+ +TC + + +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 633 FHNTAIEALQVLSLRMMSED 652
A+E +V+ + + D
Sbjct: 517 KLEEALELFEVIQMSKIDLD 536
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 28/277 (10%)
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER 428
+N+P+ A+ ++ KM+ ++ +I ++ +L F ++ S LS ++
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC---DCHKLSFSLSTFGKLTKL----- 170
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYF-YVAEKLFVYG------------NPS 475
G Q ++ LL+ L E I E + F Y+ E F+ P
Sbjct: 171 -----GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
+ T +N +++ L + A + +M G H D TY +V+ + KSA L
Sbjct: 226 VIT--FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+S M P Y+A+I L +D ++A L GI +V +N + C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
R + ++ M + ++ P+ +T + SA V G
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 145/347 (41%), Gaps = 53/347 (15%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF----------------- 401
+N LL++ + + + + + KM++++++ + TY +L + F
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 402 --GFVNSPYEHSNMLSQLHVAKRIN---AIERDMANNGVQHSHLSMKNLLNALG------ 450
G+ S S++L+ KRI+ A+ M G + ++ L++ L
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 451 -----EERMIRE-----LIEYFYVAEKLFVYGNPSLATD---------------IYNVVL 485
+RM++ L+ Y V L G+ LA + I+N ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 486 HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFS 545
L + + A+N+FK M+ G P+ TY+ ++ C + AS L+S MI + +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 546 PVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELI 605
P T+ ALI +++ KF EA L + I D+ +N+ + C R+D + +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 606 VEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
E+M + P+ VT + + S E + +S R + D
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 167/390 (42%), Gaps = 20/390 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++G K + LA L+ +M+ ++ ++ II + + D L + K M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ + ++P T ++L S +CS D ++ D I + ++P+ +NAL+ + +
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A +++ M + + PDI TY L + GF M +L AK++ M +
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVN--GFC--------MHDRLDKAKQMFEF---MVS 393
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
++ L+ + + + + E F + G+ T Y ++ L
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD----TVTYTTLIQGLFHDG 449
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A +FK+M G PD TY+I++D + A + M + YT
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I+ + + K ++ +L L G++ +V+ +NT + C KR + +++ M ++
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
PN T + A++ G + E ++
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 139/344 (40%), Gaps = 29/344 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN +I K ++ A L +M+ G++P+ TY +I + D +L M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 317 QENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPE 373
++ + P L + A + + ++ + + D I + P YN+L+ + ++ +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNML 414
+A Q+F M PD+ TY L F G V ++ ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 415 SQL-HVAKRINA--IERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVY 471
L H NA + + M ++GV ++ LL+ L + + +E F +K +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI- 501
Query: 472 GNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKS 531
L IY ++ + +A K ++F + L G P+ TYN M+ R +
Sbjct: 502 ---KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 532 ASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTR 575
A L+ M G P + TY LI+ L+D + L+ R
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 173/430 (40%), Gaps = 48/430 (11%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM +G +P + T+ +I + + + ++ M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 316 QQENLKPLNSTLATLSVICS---KALQLDLAESFLDRISECLSPHP---YNALLASCNVL 369
Q +P L T V+ + K DLA + L+++ +N ++ S
Sbjct: 217 VQRGCQP---NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA---- 425
+ A+ +F +M+ + P++ TY L S + S +LS + + K+IN
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVT 332
Query: 426 -------------------IERDMANNGVQHSHLSMKNLLNALG-EERM--IRELIEYFY 463
+ DM + + +L+N +R+ +++ E F
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FM 391
Query: 464 VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
V++ F P + T YN ++ ++++ + +F+ M G D+ TY ++
Sbjct: 392 VSKDCF----PDVVT--YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
+A + M+ G P TY+ L+ L + K +AL + + + I+LD+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQV 643
++ T + C ++D + + + V+PN VT + S + A
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL--- 562
Query: 644 LSLRMMSEDG 653
L+ M EDG
Sbjct: 563 --LKKMKEDG 570
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 166/416 (39%), Gaps = 35/416 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN ++ AK K + + L +M+ L + TY+ +I +S L +L M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP 372
+ +P TL++L ++ A + +D++ E + P + L+ + N+
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKA 206
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA- 431
AV + +M Q P++ TY ++ + N+L+++ AK IE D+
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK----IEADVVI 262
Query: 432 NNGVQHSHLSMKNLLNALG-----EERMIR-ELIEYFYVAEKLFVYG------------- 472
N + S +++ +AL E + IR ++ Y + L YG
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 473 ----NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS 528
NP+L T +N ++ V+ K A ++ M PD TYN +V+ +
Sbjct: 323 EKKINPNLVT--FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNT 588
A + M+ + P TY LIK + ++ + L G+ D + + T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
++ + D + + + M + V P+ +T + N+G A+E +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 179/414 (43%), Gaps = 35/414 (8%)
Query: 240 ELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAA 299
E+ RR L+ + +++ ++ G K ++ L+ +M+ LG+KP+ T+ I+
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 300 SFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECL-SPH- 357
+ +LK M E P T L A +LD A+ +++ P
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 358 -PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF--------------- 401
Y LL + + Q +++M++ +PD+ T+ +L
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 402 ----GFVNSPYEHSNMLSQLHVAKRIN-AIE--RDMANNGVQHSHLSMKNLLNALGEERM 454
G + + + ++ ++ L R++ A+E +M + GV+ + + ++ G+
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 455 IRELIEYFYVAEKLFVYGNPSLATDIY--NVVLHHLVEAQKGQIAINIFKRMKLCGYHPD 512
+E F EK+ G +A +I N L+ L +A + + A IF +K G PD
Sbjct: 449 SVSALETF---EKMKTKG---IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 513 SETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE 572
S TYN+M+ C S + A L+S M+ G P +LI L + ++ +EA +
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 573 RTRLDGIQLDVLLFNTFLRQACYKRRI-DIIELIVEYMHQEKVRPNPVTCGYVF 625
R + ++ V+ +NT L +I + IEL E M Q+ PN +T +F
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF-EGMVQKGCPPNTITFNTLF 615
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 20/316 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F ++ K N+ A + M+ G+ P+ TY+ +I D L + M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 316 QQENLKPLNST-LATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ +KP T + + + E+F ++ ++P+ NA L S +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A Q+F +K I L+PD TY ++ + V E +LS+ M
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE-------------MME 531
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
NG + + + +L+N L + + E + F +++ + P++ T YN +L L +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL--KPTVVT--YNTLLAGLGKNG 587
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
K Q AI +F+ M G P++ T+N + DC A ++ M+ G P TY
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 553 ALIKILLQDEKFNEAL 568
+I L+++ + EA+
Sbjct: 648 TIIFGLVKNGQVKEAM 663
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
YN ++H L++++ A+ +++RM L G+ P +TY+ ++ R S L+ M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
G P T+T I++L + K NEA +L+R +G DV+ + + C R++D
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 601 IIELIVEYMHQEKVRPNPVT 620
+ + E M + +P+ VT
Sbjct: 311 CAKEVFEKMKTGRHKPDRVT 330
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 133/331 (40%), Gaps = 34/331 (10%)
Query: 343 AESFLDRISECLSPHP----YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLF 398
A + ++ ++ L P YN L+ + E A VF ++K +PD+ TY L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 399 SLFGF---VNSPYE----------------HSNMLSQL----HVAKRINAIERDMANNGV 435
+G ++ +E H+ ++S L +V ++ M++
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 436 QHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKG 494
+ + L++ L + + E + F E + YG P+ A IYN++++ +A +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLF---EGMLDYGCRPNCA--IYNILINGFGKAGEA 942
Query: 495 QIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
A +FKRM G PD +TY+++VDC ++ + G +P Y +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 555 IKILLQDEKFNEALNLLERTRLD-GIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
I L + + EAL L + GI D+ +N+ + ++ I + +
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 614 VRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
+ PN T + Y SG A Q +
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 165/426 (38%), Gaps = 55/426 (12%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+S+N +IH K + A ++ +M + G +PS TY ++ + + +G+LK
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRIS-ECLSPH--PYNALLASCNVLNQ 371
M+ LKP T + +A +++ A L R+ E P Y L+ + +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ A +VF KMK + PD TY L F S + +M
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRF-------------SDNRDLDSVKQFWSEME 355
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
+G ++ L++AL + E + V + P+L T YN ++ L+
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL--PNLHT--YNTLICGLLRV 411
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVD-----------------------------C 522
+ A+ +F M+ G P + TY + +D C
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 523 CSILRSY------KSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
+ L S + A + + G P + TY ++K + + +EA+ LL
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNT 636
+G + DV++ N+ + R+D + M + K++P VT + + +G
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 637 AIEALQ 642
AIE +
Sbjct: 592 AIELFE 597
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 30/361 (8%)
Query: 289 SCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLD 348
+C Y +++A + V +MQ+ +K +T T+ S L A L
Sbjct: 120 TCNY--MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 349 RISE---CLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVN 405
++ E L+ + YN L+ A++V+ +M P ++TY
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY----------- 226
Query: 406 SPYEHSNMLSQLHVAKRINAIE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYF 462
S+++ L + I+++ ++M G++ + + + LG I E E
Sbjct: 227 -----SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE-- 279
Query: 463 YVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD 521
+ +++ G P + T Y V++ L A+K A +F++MK + PD TY ++D
Sbjct: 280 -ILKRMDDEGCGPDVVT--YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 522 CCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQL 581
S R S S M + G P T+T L+ L + F EA + L+ R GI
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 582 DVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
++ +NT + R+D + M V+P T Y SG +A+E
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 642 Q 642
+
Sbjct: 457 E 457
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 140/330 (42%), Gaps = 20/330 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I G + KL+ M + P+ T+ +I + + R+ + K M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLD-RISECLSPH--PYNALLASCNVLNQP 372
+ P T +L K LD A +D +S+ P+ +N L+ N+
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ +++F KM ++ D TY L GF L +L+VAK + ++M +
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQ--GFCE--------LGKLNVAKELF---QEMVS 466
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
V + ++ K LL+ L + + +E F EK L IYN+++H + A
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK----SKMELDIGIYNIIIHGMCNAS 522
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
K A ++F + L G P +TYNIM+ A LL M G +P TY
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLD 582
LI+ L D +++ L+E + G +D
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 165/401 (41%), Gaps = 57/401 (14%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F+ +I+G E A +L+ +M +G KP T + ++ + + ++ M
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 316 QQENLKPLNSTLA-TLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQ 371
+ +P T L+V+C K+ Q LA L ++ E L Y+ ++
Sbjct: 220 VEYGCQPNAVTYGPVLNVMC-KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ A +F +M+ + +I TY +L GF N+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIG--GFCNAGR----------------------W 314
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
++G +++R++I+ K+ NP++ T ++V++ V+
Sbjct: 315 DDGA-----------------KLLRDMIK-----RKI----NPNVVT--FSVLIDSFVKE 346
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
K + A + K M G PD+ TY ++D A+ ++ +M+ +G P T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
LI + + ++ L L + L G+ D + +NT ++ C ++++ + + + M
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 612 EKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
KV PN VT + ++G A+E + + M D
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
++ + + + ++ + + + K+M+L G + T +IM++C R A + +I
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
+ G+ P T T++ LI L + + +EAL L++R G + D++ NT + C +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
L+++ M + +PN VT G V + SG A+E L+ + R + D
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 181/454 (39%), Gaps = 73/454 (16%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+N ++ K + + L +M G+KP + TY +I S L L M
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS 249
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRIS---------ECLSPHPYNALLASCN 367
+ ++P T + + KA + AE F + S CLS + YN ++ +
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 368 VLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLS--QLHVA----- 420
Q + A + F +M + ++P T+ + ++G E ++++ +LH A
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRT 369
Query: 421 --------------KRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAE 466
+R A ++M ++G++ +S + LL A M+ E AE
Sbjct: 370 YNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE-------AE 422
Query: 467 KLFV-YGNPSLATDIY--NVVLHHLVEAQKGQIAINIFKRMKLCG--------------- 508
L + ++ D Y + + VEA+ + + + FKR + G
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYG 482
Query: 509 ---YHPDSE---------------TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
Y ++E YN+M+ I +S + A L M+ G +P CT
Sbjct: 483 ERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 542
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y L++IL + ++ LE+ R G D + + + ++++ E + + M
Sbjct: 543 YNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV 602
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
+ + P+ V G + +A+ ++G A+ ++ +
Sbjct: 603 EYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAM 636
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 168/402 (41%), Gaps = 40/402 (9%)
Query: 212 VRKGVQPLGLAHQTISTGNKKVKIAK--LDELSR--RKHLQLMKVLRWSFNDVIHGCAKE 267
V KG+ + + TI G K+ K L+ LS+ H++ V+ ++ +I K+
Sbjct: 253 VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI---YSAIIDRLCKD 309
Query: 268 KNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTL 327
++ A+ L +M G+ P+ TY+ +I + D +L+ M + + P T
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 328 ATLSVICSKALQLDLAESFLDR-ISECLSPHP--YNALLASCNVLNQPERAVQVFAKMKQ 384
L K +L AE D + C+ P YN+++ N+ + A +F M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 385 IKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNMLSQLHVAKRINA 425
PD+ T+ + ++ G V + ++ ++ +NA
Sbjct: 430 ----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 426 IE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
+ ++M ++GV ++ LL E + E +E F V + L T YN
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ----MSKIDLDTVAYN 541
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+++H + + K A ++F + + G PD +TYN+M+ + A++L M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVL 584
G P TY LI+ L+ + ++++ L+ R +G D
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 145/351 (41%), Gaps = 30/351 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+FN +I+G E + A L+ +M G+ TY I+ + + L +L M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 316 QQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
++ ++KP + A + +C D F + + + ++P+ YN ++ +
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++ M + ++ PD+ T+ L S +E + ++ + R +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM--------LHRCIFP 399
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEY--FYVAEKLF-VYGNPSLATDIYNVVLHHLV 489
+ V ++ MI ++ F A+ +F + +P + T +N ++
Sbjct: 400 DTVTYN--------------SMIYGFCKHNRFDDAKHMFDLMASPDVVT--FNTIIDVYC 443
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
A++ + + + + G ++ TYN ++ + + +A L MI G P T
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
T L+ ++EK EAL L E ++ I LD + +N + C ++D
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 348 DRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSP 407
DRISE L+ Y + L AV +F +M +I L P + T+ L +
Sbjct: 190 DRISEALALFGY---MVETGFL----EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 408 YEHSNMLSQLHVAK--RINAIERDMANNGV--QHSHLSMKNLLNALGEERMIRELIEYFY 463
E + +++++ V K I+ + NG+ S NLL+ + E + +++ Y
Sbjct: 243 LEAAALVNKM-VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 464 VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC- 522
+ ++L G+ S A +++ +L +KG IA N+F TYN M+D
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEML------EKG-IAPNVF-------------TYNCMIDGF 341
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
CS R + A L+ MI + +P T+ ALI +++ K EA L + I D
Sbjct: 342 CSFGR-WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 583 VLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+ +N+ + C R D + + + M P+ VT + Y + + ++ L+
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 643 VLSLR 647
+S R
Sbjct: 457 EISRR 461
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 28/277 (10%)
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER 428
+N+P+ A+ ++ KM+ ++ +I ++ +L F ++ S LS ++
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC---DCHKLSFSLSTFGKLTKL----- 170
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYF-YVAEKLFVYG------------NPS 475
G Q ++ LL+ L E I E + F Y+ E F+ P
Sbjct: 171 -----GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
+ T +N +++ L + A + +M G H D TY +V+ + KSA L
Sbjct: 226 VIT--FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+S M P Y+A+I L +D ++A L GI +V +N + C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
R + ++ M + ++ P+ +T + SA V G
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/440 (17%), Positives = 171/440 (38%), Gaps = 59/440 (13%)
Query: 241 LSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAAS 300
L R+ ++ + + +SFN +I + ++ LG +P T++ ++
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 301 FQ---------------SNFRDGLGVLKIMQQENLKPLNSTLATL-SVICSKALQLDLAE 344
+ + F + + + M + L P+ T TL + +C + L+ A
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 345 SFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFG 402
+ + L Y ++ + + A+ + +KM++ + PD+ Y +
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 403 FVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE----ERMIREL 458
+ + S++ +E+ +A N ++ M + + G +R++R++
Sbjct: 308 KDGHHSDAQYLFSEM--------LEKGIAPNVFTYN--CMIDGFCSFGRWSDAQRLLRDM 357
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCG------YHPD 512
IE NP + T +N ++ V+ K +F+ KLC PD
Sbjct: 358 IEREI---------NPDVLT--FNALISASVKEGK------LFEAEKLCDEMLHRCIFPD 400
Query: 513 SETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE 572
+ TYN M+ + A + +M SP T+ +I + + ++ +E + LL
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 573 RTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
G+ + +NT + C ++ + + + M V P+ +TC + + +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 633 FHNTAIEALQVLSLRMMSED 652
A+E +V+ + + D
Sbjct: 517 KLEEALELFEVIQMSKIDLD 536
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 157/395 (39%), Gaps = 57/395 (14%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN ++ AK + L L QM+ LG+ TY I +S L VL M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP 372
+ +P TL++L + ++ A + +D++ E + P + L+ + N+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKA 204
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
AV + +M Q PD+ TY + VN + ++ D+A
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTV------VNGLCKRGDI---------------DLA- 242
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
NLLN + R+ ++ I+N ++ L + +
Sbjct: 243 ----------LNLLNKMEAARIKANVV--------------------IFNTIIDSLCKYR 272
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
++A+++F M+ G P+ TYN +++C + AS L+S M+ + +P T+
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
ALI ++ K EA L E I D + +N + C R+D + + ++M +
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
PN T + + + +E + +S R
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 164/414 (39%), Gaps = 33/414 (7%)
Query: 195 MYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTG-NKKVKIAKLDELSRRKHLQLMKVL 253
++L + S ++ V++G QP + + T+ G K+ I L + +K
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
FN +I K ++ +A L +M+ G++P+ TY+ +I + D +L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 314 IMQQENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSPHP--YNALLASCNVLN 370
M ++ + P T L K +L AE + I + P YN L+ + N
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHS 411
+ + A Q+F M LP+I+TY L + F G V + ++
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 412 NMLSQLHVAKRINAIE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL 468
++ A ++ + + M +N V ++ LL+ L + + F +K
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK- 496
Query: 469 FVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS 528
L IYN ++ + +A K A ++F + + PD TYN M+ R
Sbjct: 497 ---SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPDVVTYNTMISGLCSKRL 550
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
+ A L M G P + TY LI+ L+D + L++ R G D
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 156/368 (42%), Gaps = 26/368 (7%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM +G KP + T+ +I + + + ++ M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC---LSPHPYNALLASCNVLNQP 372
Q +P T T+ K +DLA + L+++ + +N ++ S
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E AV +F +M+ + P++ TY L + + S +LS + + K+IN
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM-LEKKINP------- 326
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL---FVYGNPSLATDIYNVVLHHLV 489
+ ++ L++A +E + E AEKL + + T YN++++
Sbjct: 327 -----NVVTFNALIDAFFKEGKLVE-------AEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ A +FK M P+ +TYN +++ + + L M ++G T
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
TYT +I+ Q + A + ++ + + D++ ++ L C ++D +I +Y+
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 610 HQEKVRPN 617
+ ++ N
Sbjct: 495 QKSEMELN 502
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/412 (18%), Positives = 166/412 (40%), Gaps = 44/412 (10%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
++F +IHG A L+ QM G +P TY ++ + + L +L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 315 MQQENLKP----LNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNV 368
M+ +K N+ + +L + +DL F + ++ + P+ YN+L+
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDL---FTEMETKGIRPNVVTYNSLINCLCN 305
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF----GFVNSPYEHSNMLSQLHVAKRIN 424
+ A ++ + M + K+ P++ T+ L F V + H M+ +
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-------- 357
Query: 425 AIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVV 484
+I+ D + + M N L+ ++M + F V++ P++ T YN +
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDE--AKQMFK-----FMVSKDCL----PNIQT--YNTL 404
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
++ + ++ + + +F+ M G ++ TY ++ SA ++ M+
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI-DIIE 603
TY+ L+ L K + AL + + + ++L++ ++NT + C ++ + +
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 604 LIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNI 655
L ++P+ VT + S + A + R M EDG +
Sbjct: 525 LFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDL-----FRKMKEDGTL 567
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 30/343 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F +++G + A + QM +G KP+ Y+ II + L +L M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSP---HP----YNALLASCN 367
+++ + P T +L S +CS D R+ C++ +P +NAL+ +C
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDAT-----RMVSCMTKREIYPDVFTFNALIDACV 267
Query: 368 VLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIE 427
+ A + + +M + L PDI TY LL ++G M S+L A+ +
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLL--IYGLC--------MYSRLDEAEEMFGF- 316
Query: 428 RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHH 487
M + G ++ L+N + + + ++ F + V N T Y +++
Sbjct: 317 --MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN----TVTYTILIQG 370
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
A K +A IF+RM CG HP+ TYN+++ + A ++++ M + G
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
TY +I+ + + + +A ++ G+ D+ + T +
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 152/379 (40%), Gaps = 20/379 (5%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
F+ ++ +K K Y + L QM++LG+ + CT + ++ S L L M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 317 QENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVLNQPE 373
+ +P T +L + C D F + P+ YN ++ Q +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
A+ + +M++ + PD+ TY L S + + M+S M
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC-------------MTKR 250
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
+ + L++A +E + E E++ E + +P + T Y+++++ L +
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFY--EEMIRRSLDPDIVT--YSLLIYGLCMYSR 306
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
A +F M G PD TY+I+++ + + L M ++G T TYT
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
LI+ + K N A + R G+ +++ +N L C +I+ +I+ M +
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 614 VRPNPVTCGYVFSAYVNSG 632
+ + VT + +G
Sbjct: 427 MDADIVTYNIIIRGMCKAG 445
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 463 YVAEKLFVYGNP-SLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD 521
Y+ E++ + G P +L T N++L+ + +A++ +M G+ P T+ +++
Sbjct: 102 YLWEQMQMLGIPHNLCT--CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159
Query: 522 C-CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQ 580
C R Y A + M+ G+ P Y +I L + ++ + AL+LL R DGI
Sbjct: 160 GFCRGDRVY-DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 581 LDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEA 640
DV+ +N+ + C R +V M + ++ P+ T + A V G + A E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 641 LQVLSLRMMSED 652
+ + R + D
Sbjct: 279 YEEMIRRSLDPD 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
PS+A ++ +L + + +K + I ++++M++ G + T NI+++C A
Sbjct: 79 PSIAD--FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
+ MI+ G P T+ +L+ + ++ +AL + ++ G + +V+++NT +
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
C +++D ++ M ++ + P+ VT + S +SG + A + ++ R + D
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 19/249 (7%)
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ ++ +F M Q + LP I + L S +S++ + + M
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLS-------------AISKMKKYDVVIYLWEQMQM 109
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN-PSLATDIYNVVLHHLVEA 491
G+ H+ + LLN + + + K+ G+ PS+ T + +L+
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFL---GKMIKLGHEPSIVT--FGSLLNGFCRG 164
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+ A+ +F +M GY P+ YN ++D + +A L++ M + G P TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
+LI L ++++A ++ I DV FN + + R+ E E M +
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 612 EKVRPNPVT 620
+ P+ VT
Sbjct: 285 RSLDPDIVT 293
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 150/382 (39%), Gaps = 23/382 (6%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQA-ASFQSNFRDGLGVLK 313
+S+ +I A Y A + +M+ G KP+ TY+ I+ + + +++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 314 IMQQENLKPLNSTLATLSVICSK-ALQLDLAESFLDRISECLSPH--PYNALLASCNVLN 370
M+ + + P T TL C + +L + A+ F + + S YNALL +
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+P+ A++V +M P I TY L S Y ML + ++ M
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISA-------YARDGMLDEAM------ELKNQM 375
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLV 489
A G + + LL+ + + F E++ G P++ T +N +
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIF---EEMRNAGCKPNICT--FNAFIKMYG 430
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
K + IF + +CG PD T+N ++ S + M R GF P
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
T+ LI + F +A+ + R G+ D+ +NT L + E ++ M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 610 HQEKVRPNPVTCGYVFSAYVNS 631
+ +PN +T + AY N
Sbjct: 551 EDGRCKPNELTYCSLLHAYANG 572
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 137/355 (38%), Gaps = 59/355 (16%)
Query: 286 KPSSCTYD--GIIQAASFQSNFRDGLGVLK-IMQQENLKPL--NSTLATLSVICSKALQL 340
KP S + + ++ F F L M+Q++ + + NS +A + + K ++
Sbjct: 130 KPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRV 189
Query: 341 DLAESFLDRISE---CLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL 397
A + + + E L + Y +L+++ + AV VF KM++ P + TY ++
Sbjct: 190 SSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVI 249
Query: 398 FSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRE 457
++FG + +P+ +I ++ M ++G+
Sbjct: 250 LNVFGKMGTPW------------NKITSLVEKMKSDGIA--------------------- 276
Query: 458 LIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYN 517
P T YN ++ Q A +F+ MK G+ D TYN
Sbjct: 277 ----------------PDAYT--YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 518 IMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLD 577
++D K A +++ M+ GFSP TY +LI +D +EA+ L +
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 578 GIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
G + DV + T L +++ I E M +PN T Y N G
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 168/401 (41%), Gaps = 36/401 (8%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++ ++ G + A + +M+ G KP+ CT++ I+ + F + ++KI
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE---MMKI 441
Query: 315 MQQENLKPLNSTLAT----LSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNV 368
+ N+ L+ + T L+V + +++ F + P +N L+++ +
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER 428
E+A+ V+ +M + PD+ TY + + L++ + ++ +
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA-------------ALARGGMWEQSEKVLA 548
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVL--- 485
+M + + + L+ +LL+A + I + +AE+++ A + +VL
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLM---HSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 486 --HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG 543
L EA++ F +K G+ PD T N MV + A+ ++ M +G
Sbjct: 606 KCDLLPEAERA------FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIE 603
F+P TY +L+ + + F ++ +L GI+ D++ +NT + C R+
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 604 LIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
I M + P+ +T +Y AI ++ +
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 164/402 (40%), Gaps = 29/402 (7%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+ +IH +K A +L+ +M ++G P + T++ +I + ++ M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP 372
P + T L K ++D A+ RI P P +N L+ +
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKPEIVIFNTLIHGFVTHGRL 369
Query: 373 ERAVQVFAKM-KQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ A V + M ++PD+ TY L ++G+ L LH DM
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSL--IYGYWKEGLV-GLALEVLH----------DMR 416
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVE 490
N G + + S L++ + + ++ E + V ++ G P+ T +N ++ +
Sbjct: 417 NKGCKPNVYSYTILVDGFCK---LGKIDEAYNVLNEMSADGLKPN--TVGFNCLISAFCK 471
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
+ A+ IF+ M G PD T+N ++ + K A L+ MI +G T T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y LI L+ + EA L+ G LD + +N+ ++ C +D + E M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
++ P+ ++C + + SG A+E + + LR + D
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 169/425 (39%), Gaps = 68/425 (16%)
Query: 220 GLAHQTISTG---NKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKL 276
G A I+ G N KI ++D ++ ++ K FN +IHG AK +
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDA-AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 277 IVQMKI-LGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICS 335
+ M G+ P CTY+ +I + L VL M+ + KP + L
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 336 KALQLDLAESFLDRIS-ECLSPHP--YNALLAS-CNVLNQPERAVQVFAKMKQIKLLPDI 391
K ++D A + L+ +S + L P+ +N L+++ C PE AV++F +M + PD+
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE-AVEIFREMPRKGCKPDV 494
Query: 392 RTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNAL-- 449
T+ L S L ++ K + RDM + GV + ++ L+NA
Sbjct: 495 YTFNSLIS-------------GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 450 -GEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCG 508
GE + R+L+ ++ G+P L YN ++ L A + A ++F++M
Sbjct: 542 RGEIKEARKLVN------EMVFQGSP-LDEITYNSLIKGLCRAGEVDKARSLFEKM---- 590
Query: 509 YHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEAL 568
+R G +P + LI L + EA+
Sbjct: 591 -------------------------------LRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 569 NLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAY 628
+ L G D++ FN+ + C RI+ + + E + P+ VT + S
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 629 VNSGF 633
GF
Sbjct: 680 CKGGF 684
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 65/152 (42%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
YNVVL LV ++A N+F M P T+ +++ + SA L+ M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
+ G P + Y LI L + + NEAL LLE L G D FN + C RI+
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+V M P+ +T GY+ + G
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYN-IMVDCCSILRSYKSASLLISM 538
IY ++H L + + A+ + + M L G PD+ET+N +++ C R ++A ++ M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
+IR GF+P TY L+ L + + + A +L R + ++++FNT + R
Sbjct: 314 LIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGR 368
Query: 599 IDIIELIVEYM-HQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+D + ++ M + P+ T + Y G A+E L
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 140/323 (43%), Gaps = 38/323 (11%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+S+ ++ G K A ++ +M G+KP++ ++ +I A + + + + +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFL----DRISECLSPH--PYNALLASCNV 368
M ++ KP + T + + S ++D + L D ISE + + YN L
Sbjct: 485 MPRKGCKP---DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL------ 535
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYE---HSNMLSQLHVAKRIN- 424
+ F + +IK L + F SP + +++++ L A ++
Sbjct: 536 -------INAFLRRGEIK------EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 425 --AIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
++ M +G S++S L+N L M+ E +E + E + P + T +N
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE--FQKEMVLRGSTPDIVT--FN 638
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
+++ L A + + + +F++++ G PD+ T+N ++ A LL+ I
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 543 GFSPVTCTYTALIKILLQDEKFN 565
GF P T++ L++ ++ E +
Sbjct: 699 GFVPNHRTWSILLQSIIPQETLD 721
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 61/339 (17%)
Query: 353 CLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSN 412
C YN ++ N ++A +F +M++ PD TY+ L + G N
Sbjct: 140 CARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMN 199
Query: 413 MLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG 472
++ DM + S + NL+NA G RE +E V +K+ G
Sbjct: 200 LMD-------------DMLRAAIAPSRSTYNNLINACGSSGNWREALE---VCKKMTDNG 243
Query: 473 -NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSIL-RSYK 530
P L T +N+VL ++ A++ F+ MK PD+ T+NI++ C S L +S +
Sbjct: 244 VGPDLVT--HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 301
Query: 531 SASLLISM------------------------------------MIRQGFSPVTCTYTAL 554
+ L SM M+ +G P +Y AL
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 361
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKV 614
+ AL++L + +GI DV+ + L R+ + + M +E+
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 615 RPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
+PN VT + AY ++GF A+E R M +DG
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEI-----FRQMEQDG 455
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 174/435 (40%), Gaps = 39/435 (8%)
Query: 238 LDELSRRKHLQL-MKVLRWS------------FNDVIHGCAKEKNYMLAKKLIVQMKILG 284
+ ELSRR ++L + V +W +N +I A+ A+ L +M+
Sbjct: 114 IRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWS 173
Query: 285 VKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAE 344
KP + TYD +I A +R + ++ M + + P ST L C + A
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 233
Query: 345 SFLDRISE-CLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL---F 398
++++ + P +N +L++ Q +A+ F MK K+ PD T+ ++
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 399 SLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIREL 458
S G + + N + + R + + + S+ +L + GE R +
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVV-----------TFTSIMHLYSVKGEIENCRAV 342
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNI 518
E VAE L P++ + YN ++ A+++ +K G PD +Y
Sbjct: 343 FEAM-VAEGL----KPNIVS--YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 519 MVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDG 578
+++ R A + MM ++ P TY ALI + EA+ + + DG
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 579 IQLDVLLFNTFLRQACYKRRIDI-IELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTA 637
I+ +V+ T L AC + + + ++ ++ + N +Y+N+ A
Sbjct: 456 IKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 638 IEALQVLSLRMMSED 652
I Q + + + D
Sbjct: 515 IALYQSMRKKKVKAD 529
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 143/347 (41%), Gaps = 24/347 (6%)
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
R ++N++I+ C N+ A ++ +M GV P T++ ++ A + L +
Sbjct: 213 RSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE 272
Query: 314 IMQQENLKPLNSTLATLSVICSKALQ----LDLAESFLDRISECLSPH--PYNALLASCN 367
+M+ ++P +T + SK Q LDL S ++ +EC P + +++ +
Sbjct: 273 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-RPDVVTFTSIMHLYS 331
Query: 368 VLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIE 427
V + E VF M L P+I +Y L + H + L V
Sbjct: 332 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV------HGMSGTALSVLG------ 379
Query: 428 RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHH 487
D+ NG+ +S LLN+ G R + E F + K P++ T YN ++
Sbjct: 380 -DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK--ERRKPNVVT--YNALIDA 434
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
A+ IF++M+ G P+ + ++ CS + + ++S +G +
Sbjct: 435 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 494
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC 594
T Y + I + + +A+ L + R ++ D + F + +C
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 145/367 (39%), Gaps = 71/367 (19%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S+ +++ + + AK++ + M+ KP+ TY+ +I A + + + + M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 316 QQENLKPLNSTLATLSVICS---KALQLDLAESFLDRISECLSPHPYNALLASCNVLNQP 372
+Q+ +KP ++ TL CS K + +D S L+ YN+ + S +
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E+A+ ++ M++ K+ D T+ +L S
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILIS--------------------------------- 538
Query: 433 NGVQHSHLSMKNLLNALGEERMIR--ELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
G RM + E I Y E L + L ++Y+ VL
Sbjct: 539 -----------------GSCRMSKYPEAISYLKEMEDLSI----PLTKEVYSSVL--CAY 575
Query: 491 AQKGQI--AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+++GQ+ A +IF +MK+ G PD Y M+ + + A L M G P +
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQL-DVLLFNTFLRQAC-----YKRRIDII 602
+AL++ + + + L++ R I + F F AC +KR ID+I
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIF--SACNTLQEWKRAIDLI 693
Query: 603 ELIVEYM 609
+++ Y+
Sbjct: 694 QMMDPYL 700
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 451 EERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRM---KL 506
E MI++ +E F + + +YG NPS+ T N +L +V++ + + K M K+
Sbjct: 175 REGMIQDSLEIFRL---MGLYGFNPSVYT--CNAILGSVVKSGEDVSVWSFLKEMLKRKI 229
Query: 507 CGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNE 566
C PD T+NI+++ S++ +S L+ M + G++P TY ++ + +F
Sbjct: 230 C---PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286
Query: 567 ALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFS 626
A+ LL+ + G+ DV +N + C RI L++ M + + PN VT + +
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 627 AYVNSG 632
+ N G
Sbjct: 347 GFSNEG 352
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 182/431 (42%), Gaps = 29/431 (6%)
Query: 234 KIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYD 293
+IAK L R +++ ++N +I+G + E ++A +L+ +M G+ P+ T++
Sbjct: 318 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 377
Query: 294 GIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE- 352
+I + NF++ L + +M+ + L P + L K + DLA F R+
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 353 --CLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEH 410
C+ Y ++ + AV + +M + + PDI TY L + F V
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 411 SNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERM--IRELIEYFYVAEKL 468
++ +++ R+ ++ NG+ +S L + N RM ++E I + E +
Sbjct: 498 KEIVCRIY---RVG-----LSPNGIIYSTL----IYNCC---RMGCLKEAIRIY---EAM 539
Query: 469 FVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS 528
+ G+ + +NV++ L +A K A + M G P++ +++ +++
Sbjct: 540 ILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNT 588
A + M + G P TY +L+K L + EA L+ +D +++NT
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRM 648
L C + + M Q + P+ Y +++ + SG + +L +
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDS----YTYTSLI-SGLCRKGKTVIAILFAKE 713
Query: 649 MSEDGNILREK 659
GN+L K
Sbjct: 714 AEARGNVLPNK 724
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 149/380 (39%), Gaps = 55/380 (14%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N V+H K+ + A +L+ MK GV CTY+ +I + G +L+ M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSPH--PYNALLASCNVLNQP 372
++ + P T TL S ++ +A L+ +S LSP+ +NAL+
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ A+++F M+ L P +Y +L L G + ++ +A+ M
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVL--LDGLCKN--------AEFDLAR---GFYMRMKR 436
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
NGV ++ +++ L + + E
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGFLDE----------------------------------- 461
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A+ + M G PD TY+ +++ + +K+A ++ + R G SP Y+
Sbjct: 462 ----AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
LI + EA+ + E L+G D FN + C ++ E + M +
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 613 KVRPNPVTCGYVFSAYVNSG 632
+ PN V+ + + Y NSG
Sbjct: 578 GILPNTVSFDCLINGYGNSG 597
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 124/300 (41%), Gaps = 24/300 (8%)
Query: 355 SPHPYNALLASCNVLNQPERAVQVFAK-MKQIKLLPDIRTYELLFSLFGFVNSPYEHSNM 413
S + NA+L S V + + +V F K M + K+ PD+ T+ +L ++ +E S+
Sbjct: 197 SVYTCNAILGSV-VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL-CAEGSFEKSSY 254
Query: 414 LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN 473
L Q M +G + ++ +L+ ++ + IE + V +
Sbjct: 255 LMQ------------KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV--D 300
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
+ T YN+++H L + + + + M+ HP+ TYN +++ S AS
Sbjct: 301 ADVCT--YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
L++ M+ G SP T+ ALI + + F EAL + G+ + + L
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
C D+ M + V +T + +GF + A V+ L MS+DG
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA-----VVLLNEMSKDG 473
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 141/344 (40%), Gaps = 22/344 (6%)
Query: 280 MKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL-SVICSKAL 338
M + G PS T + I+ + LK M + + P +T L +V+C++
Sbjct: 189 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEG- 247
Query: 339 QLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYE 395
+ + + ++ + +P YN +L + + A+++ MK + D+ TY
Sbjct: 248 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYN 307
Query: 396 LLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMI 455
+L SN +++ ++ + RDM + + ++ L+N E +
Sbjct: 308 MLIH-------DLCRSNRIAKGYL------LLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 456 RELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSET 515
LI + E L +P+ T +N ++ + + A+ +F M+ G P +
Sbjct: 355 --LIASQLLNEMLSFGLSPNHVT--FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 516 YNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTR 575
Y +++D + A M R G TYT +I L ++ +EA+ LL
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 576 LDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPV 619
DGI D++ ++ + C R + IV +++ + PN +
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 165/402 (41%), Gaps = 57/402 (14%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+ FN ++ AK K + L L +M+ LG+ + TY+ +I +S L +L
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLN 370
M + +P TL++L ++ A + +D++ E + P + L+ + N
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHN 129
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ AV + +M Q P++ TY ++ VN + ++ D+
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVV------VNGLCKRGDI---------------DL 168
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
A N LLN + ++ +++ I+N ++ L +
Sbjct: 169 AFN-----------LLNKMEAAKIEADVV--------------------IFNTIIDSLCK 197
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
+ A+N+FK M+ G P+ TY+ ++ C + AS L+S MI + +P T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
+ ALI +++ KF EA L + I D+ +N+ + C R+D + + E+M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ P+ T + + S E + +S R + D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 174/430 (40%), Gaps = 48/430 (11%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +++G K A L+ QM +G +P + T+ +I + + + ++ M
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 316 QQENLKPLNSTLATLSVICS---KALQLDLAESFLDRISECLSPHP---YNALLASCNVL 369
Q +P L T V+ + K +DLA + L+++ +N ++ S
Sbjct: 142 VQRGCQP---NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA---- 425
+ A+ +F +M+ + P++ TY L S + S +LS + + K+IN
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVT 257
Query: 426 -------------------IERDMANNGVQHSHLSMKNLLNALG-EERM--IRELIEYFY 463
+ DM + + +L+N +R+ +++ E F
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE-FM 316
Query: 464 VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
V++ F P L D YN ++ ++++ + +F+ M G D+ TY ++
Sbjct: 317 VSKDCF----PDL--DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
+A + M+ G P TY+ L+ L + K +AL + + + I+LD+
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQV 643
++ T + C ++D + + + V+PN VT + S + A
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL--- 487
Query: 644 LSLRMMSEDG 653
L+ M EDG
Sbjct: 488 --LKKMKEDG 495
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 135/344 (39%), Gaps = 29/344 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN +I K ++ A L +M+ G++P+ TY +I + D +L M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSPH--PYNALLASCNVLNQPE 373
++ + P T L K + AE D I + P YN+L+ + ++ +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNML 414
+A Q+F M PD+ TY L F G V ++ ++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 415 SQL-HVAKRINA--IERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVY 471
L H NA + + M ++GV ++ LL+ L + + +E F +K
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK---- 423
Query: 472 GNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKS 531
L IY ++ + +A K ++F + L G P+ TYN M+ R +
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 532 ASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTR 575
A L+ M G P + TY LI+ L+D + L+ R
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 165/390 (42%), Gaps = 20/390 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ V++G K + LA L+ +M+ ++ ++ II + + D L + K M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+ + ++P T ++L S +CS D ++ D I + ++P+ +NAL+ + +
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++ M + + PDI TY L + GF M +L AK++ M +
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLIN--GFC--------MHDRLDKAKQMFEF---MVS 318
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
+ L+ + + + + E F + G+ T Y ++ L
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD----TVTYTTLIQGLFHDG 374
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A +FK+M G PD TY+I++D + A + M + YT
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I+ + + K ++ +L L G++ +V+ +NT + C KR + +++ M ++
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
P+ T + A++ G + E ++
Sbjct: 495 GPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 167/384 (43%), Gaps = 28/384 (7%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+FN ++ K+ + +KL+ ++ GV P+ TY+ IQ + + ++ +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSP--HPYNALLASCNVLNQP 372
++ KP T L K + AE +L + ++E L P + YN L+A
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG------- 330
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRIN---AIERD 429
+ K ++L I + +F+ GFV + + +++ L N A+ +
Sbjct: 331 ------YCKGGMVQLAERI-VGDAVFN--GFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFY-VAEKLFVYGNPSLATDIYNVVLHHL 488
G++ + + L+ L + MI E + ++EK + P + T +N++++ L
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI---PEVQT--FNILVNGL 436
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ A + K M GY PD T+NI++ S ++A ++ +M+ G P
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TY +L+ L + KF + + + G ++ FN L C R++D ++E
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSG 632
M + V P+ VT G + + +G
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 130/334 (38%), Gaps = 35/334 (10%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+N +I G + + + A +L +M G+ P T++ ++ D G++K+M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLD-RISECLSP--HPYNALLASCNVLNQPE 373
+ P T L S L+++ A LD + + P + YN+LL ++ E
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
++ + M + P++ T+ +L L + + +M N
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLE-------------SLCRYRKLDEALGLLEEMKNK 560
Query: 434 GVQHSHLSMKNLLNAL-------GEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLH 486
V ++ L++ G + R++ E + V S +T YN+++H
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV----------SSSTPTYNIIIH 610
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMMIRQGFS 545
E +A +F+ M PD TY +MVD C L+ MM GF
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM-ENGFI 669
Query: 546 PVTCTYTALIKILLQDEKFNEALNLLERTRLDGI 579
P T +I L +++ EA ++ R G+
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 173/406 (42%), Gaps = 32/406 (7%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ N +++G A L+ QM +G +P + T+ ++ + + + +++ M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 316 QQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPHP---YNALLASCNVLNQ 371
+ +P L + A ++ +C + + DLA + L+++ + Y+ ++ S
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRG-EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ A+ +F +M + PD+ TY L S + S +LS + +ER +
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM--------LERKIN 307
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-----NPSLATDIYNVVLH 486
N V + +L++A +E +LIE AEKLF +P++ T YN +++
Sbjct: 308 PNVV-----TFNSLIDAFAKEG---KLIE----AEKLFDEMIQRSIDPNIVT--YNSLIN 353
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+ A IF M PD TYN +++ + L M R+G
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
T TYT LI Q + A + ++ DG+ +++ +NT L C +++ ++
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 607 EYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
EY+ + K+ P+ T + +G + LSL+ + D
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 181/438 (41%), Gaps = 27/438 (6%)
Query: 212 VRKGVQPLGLAHQTISTG----NKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKE 267
V G QP + T+ G NK + L E K Q V ++ VI+G K
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV---TYGAVINGLCKR 218
Query: 268 KNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTL 327
LA L+ +M+ ++ Y +I + + D L + M + ++P T
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 328 ATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQ 384
++L S +C+ D + D + ++P+ +N+L+ + + A ++F +M Q
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 385 IKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKN 444
+ P+I TY L + GF M +L A++I + M + ++
Sbjct: 339 RSIDPNIVTYNSLIN--GFC--------MHDRLDEAQQIFTL---MVSKDCLPDVVTYNT 385
Query: 445 LLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM 504
L+N + + + + +E F + + GN T Y ++H +A A +FK+M
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGN----TVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 505 KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKF 564
G HP+ TYN ++D + A ++ + + P TY + + + + K
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 565 NEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYV 624
+ +L L G++ DV+ +NT + C K + + M ++ P+ T +
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 625 FSAYVNSGFHNTAIEALQ 642
A++ G + E ++
Sbjct: 562 IRAHLRDGDKAASAELIK 579
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 164/408 (40%), Gaps = 63/408 (15%)
Query: 284 GVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENL-------KPLNSTL---ATLSVI 333
G+ S +YDG + S R+ L LK+ + +L +P S + LS I
Sbjct: 21 GIYFSGLSYDGYREKLS-----RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAI 75
Query: 334 CSKALQLDLAESFLDRISECLSPH---PYNALLASCNVLNQPERAVQVFAKMKQIKLLPD 390
+K + DL SF +++ H YN ++ +Q A+ + KM ++ P
Sbjct: 76 -AKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPS 134
Query: 391 IRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALG 450
I T L + GF H N +S+ A+ M G Q ++ L++ L
Sbjct: 135 IVTLNSLLN--GFC-----HGNRISE------AVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 451 E-----------ERMI-----RELIEYFYVAEKLFVYGNPSLATD--------------- 479
+ ERM+ +L+ Y V L G P LA +
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
IY+ V+ L + + A+N+F M G PD TY+ ++ C + AS L+S M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
+ + +P T+ +LI ++ K EA L + I +++ +N+ + C R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 600 DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
D + I M + P+ VT + + + + +E + +S R
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 61/339 (17%)
Query: 353 CLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSN 412
C YN ++ N ++A +F +M++ PD TY+ L + G N
Sbjct: 8 CARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMN 67
Query: 413 MLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG 472
++ DM + S + NL+NA G RE +E V +K+ G
Sbjct: 68 LMD-------------DMLRAAIAPSRSTYNNLINACGSSGNWREALE---VCKKMTDNG 111
Query: 473 -NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSIL-RSYK 530
P L T +N+VL ++ A++ F+ MK PD+ T+NI++ C S L +S +
Sbjct: 112 VGPDLVT--HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 169
Query: 531 SASLLISM------------------------------------MIRQGFSPVTCTYTAL 554
+ L SM M+ +G P +Y AL
Sbjct: 170 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKV 614
+ AL++L + +GI DV+ + L R+ + + M +E+
Sbjct: 230 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 289
Query: 615 RPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
+PN VT + AY ++GF A+E R M +DG
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEI-----FRQMEQDG 323
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 155/387 (40%), Gaps = 26/387 (6%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
A+ L +M+ KP + TYD +I A +R + ++ M + + P ST L
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 333 ICSKALQLDLAESFLDRISE-CLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLP 389
C + A ++++ + P +N +L++ Q +A+ F MK K+ P
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 390 DIRTYELL---FSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLL 446
D T+ ++ S G + + N + + R + + + S+ +L
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV-----------TFTSIMHLY 198
Query: 447 NALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKL 506
+ GE R + E VAE L P++ + YN ++ A+++ +K
Sbjct: 199 SVKGEIENCRAVFEAM-VAEGL----KPNIVS--YNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 507 CGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNE 566
G PD +Y +++ R A + MM ++ P TY ALI + E
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 567 ALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDI-IELIVEYMHQEKVRPNPVTCGYVF 625
A+ + + DGI+ +V+ T L AC + + + ++ ++ + N
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 626 SAYVNSGFHNTAIEALQVLSLRMMSED 652
+Y+N+ AI Q + + + D
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKVKAD 397
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 138/350 (39%), Gaps = 71/350 (20%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
AK++ + M+ KP+ TY+ +I A + + + + M+Q+ +KP ++ TL
Sbjct: 277 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA 336
Query: 333 ICS---KALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLP 389
CS K + +D S L+ YN+ + S + E+A+ ++ M++ K+
Sbjct: 337 ACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKA 396
Query: 390 DIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNAL 449
D T+ +L S
Sbjct: 397 DSVTFTILIS-------------------------------------------------- 406
Query: 450 GEERMIR--ELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQI--AINIFKRMK 505
G RM + E I Y E L + L ++Y+ VL +++GQ+ A +IF +MK
Sbjct: 407 GSCRMSKYPEAISYLKEMEDLSI----PLTKEVYSSVL--CAYSKQGQVTEAESIFNQMK 460
Query: 506 LCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFN 565
+ G PD Y M+ + + A L M G P + +AL++ + + +
Sbjct: 461 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 520
Query: 566 EALNLLERTRLDGIQL-DVLLFNTFLRQAC-----YKRRIDIIELIVEYM 609
L++ R I + F F AC +KR ID+I+++ Y+
Sbjct: 521 NVFVLMDLMREKEIPFTGAVFFEIF--SACNTLQEWKRAIDLIQMMDPYL 568
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/418 (18%), Positives = 158/418 (37%), Gaps = 63/418 (15%)
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
R ++N++I+ C N+ A ++ +M GV P T++ ++ A + L +
Sbjct: 81 RSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE 140
Query: 314 IMQQENLKPLNSTLATLSVICSKALQ----LDLAESFLDRISEC---------------- 353
+M+ ++P +T + SK Q LDL S ++ +EC
Sbjct: 141 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 200
Query: 354 ------------------LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRT 393
L P+ YNAL+ + V A+ V +KQ ++PD+ +
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 394 YELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEER 453
Y L + +G P + + + +R + + ++ L++A G
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERR-------------KPNVVTYNALIDAYGSNG 307
Query: 454 MIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLC---GYH 510
+ E +E F E+ + P++ + V L + + +N+ + G +
Sbjct: 308 FLAEAVEIFRQMEQDGI--KPNVVS-----VCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 511 PDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNL 570
++ YN + + A L M ++ + T+T LI + K+ EA++
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 571 LERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAY 628
L+ I L ++++ L + ++ E I M P+ + + AY
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 373 ERAVQVFAKMKQIKLLPDI-------------RTYELLFSLF------GFVNSPYEHSNM 413
E + +F KM Q + LP I + Y+L+ SLF G + Y ++ +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 414 LSQLHVAKRIN---AIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFV 470
++ L R ++ M G + +++ +L+N + + + I+ E++
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 471 YGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD--CCSILRS 528
P + IYN ++ + A+ +F RM+ G D+ TYN +V CCS
Sbjct: 171 --RPDVV--IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS--GR 224
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNT 588
+ A+ L+ M+ + P T+TA+I + +++ KF+EA+ L E + DV +N+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNS 631
+ C R+D + +++ M + P+ VT + + + S
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
PS+ ++ VL + +++ + I++F M++CG D +YNI+++C + A
Sbjct: 67 PSIVD--FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
++ M++ G+ P T ++LI Q + +A++L+ + G + DV+++NT + +
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 594 CYKRRI-DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
C + D +EL + M ++ VR + VT + + SG + A ++ + +R
Sbjct: 185 CKIGLVNDAVELF-DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMM 539
YN+V++ L + IA+++ +M GY PD T + +++ C R + + L +S M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL-VSKM 165
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
GF P Y +I + N+A+ L +R DG++ D + +N+ + C R
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 600 DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
++ M + PN +T V +V G + A++ + ++ R + D
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 145/364 (39%), Gaps = 23/364 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + +I+G + A L+ +M+ +G +P Y+ II + D + + M
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+++ ++ T +L + +C D A D + + P+ + A++ +
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A++++ +M + + PD+ TY L + E ML M
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL-------------MVT 307
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
G ++ L+N + + + E + F + + G+ T YN ++ +A
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD----TITYNTIIQGYFQAG 363
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A IF RM P+ TY+I++ + + A +L M + TY
Sbjct: 364 RPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
+I + + +A +L G++ DV+ + T + C KR+ D +L+ M ++
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 613 KVRP 616
+ P
Sbjct: 481 GLLP 484
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/335 (18%), Positives = 129/335 (38%), Gaps = 33/335 (9%)
Query: 235 IAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDG 294
++K++E+ R + + +N +I G K A +L +M+ GV+ + TY+
Sbjct: 162 VSKMEEMGFRPDVVI-------YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 295 IIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE-C 353
++ + D +++ M ++ P T + + K + A + ++ C
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 354 LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF---------- 401
+ P YN+L+ + + + A Q+ M LPD+ TY L + F
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 402 ---------GFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEE 452
G V ++ ++ A R +A + + + + + LL L
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN 394
Query: 453 RMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPD 512
+ + + F +K L YN+V+H + + + A ++F+ + G PD
Sbjct: 395 WRVEKALVLFENMQK----SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 513 SETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
+Y M+ R + + LL M G P+
Sbjct: 451 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 154/394 (39%), Gaps = 54/394 (13%)
Query: 241 LSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAAS 300
S+ K ++ R S N ++H AK K+ M G +P+ TY+ +I
Sbjct: 215 FSKMKRFRVFPKTR-SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMC 273
Query: 301 FQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYN 360
+ + G+ + M+ L P T YN
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVT--------------------------------YN 301
Query: 361 ALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVA 420
+++ + + + V F +MK + PD+ TY L + F +L +
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC----------KFGKLPIG 351
Query: 421 KRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI 480
R+M NG++ + +S L++A +E M+++ I+++ ++ + N T +
Sbjct: 352 LEF---YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 481 YNVVLHHLVEAQKGQI--AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
+ + G + A + M G + TY ++D K A L
Sbjct: 409 IDA------NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 462
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
M G P +Y ALI ++ + + AL LL + GI+ D+LL+ TF+ C +
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
I+ ++++ M + ++ N + + AY SG
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 165/391 (42%), Gaps = 27/391 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQA----ASFQSNFRDGLGV 311
S++ ++ KE A K V M+ +G+ P+ TY +I A + FR G +
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 312 LKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVL 369
L++ + N+ + A + +C + E F + + P+ YNAL+
Sbjct: 429 LQVGVEWNVV---TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
+RA+++ ++K + PD+ Y ++G + L ++ AK + +
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTF--IWGLCS--------LEKIEAAK---VVMNE 532
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
M G++ + L L++A + E + ++L + + + V++ L
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL----DIEVTVVTFCVLIDGLC 588
Query: 490 EAQKGQIAINIFKRM-KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ + A++ F R+ G ++ + M+D ++A+ L M+++G P
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
YT+L+ + EAL L ++ G++LD+L + + + + ++ +E
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
M E + P+ V C V + G + A+E
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 4/195 (2%)
Query: 445 LLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM 504
L + L + M+ E I+ F ++ V+ T N +LH + K FK M
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPK----TRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 505 KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKF 564
G P TYNIM+DC ++A L M +G P T TY ++I + +
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 565 NEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYV 624
++ + E + + DV+ +N + C ++ I M ++PN V+ +
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 625 FSAYVNSGFHNTAIE 639
A+ G AI+
Sbjct: 374 VDAFCKEGMMQQAIK 388
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 151/388 (38%), Gaps = 63/388 (16%)
Query: 240 ELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAA 299
E+ RR +K+ +S V+ G + +KKLI + + G+KP + TY+ II A
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 300 SFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC---LSP 356
Q +F GVLK+M+++ + T L + K ++ AE D + E
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 357 HPYNALLA-SCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLS 415
H Y +L++ +C N +RA +F ++ + L P S Y + ++
Sbjct: 330 HVYTSLISWNCRKGNM-KRAFLLFDELTEKGLSP----------------SSYTYGALID 372
Query: 416 QLHVAKRINAIE---RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG 472
+ + A E +M + GV + + L++ + M+ E
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE--------------- 417
Query: 473 NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSA 532
A+ IY+V M+ G+ D T N + C + L+ Y A
Sbjct: 418 ----ASMIYDV--------------------MEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 533 SLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQ 592
+ M+ G T +YT LI + ++ EA L G+Q + + +N +
Sbjct: 454 KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 593 ACYKRRIDIIELIVEYMHQEKVRPNPVT 620
C + +I + M + P+ T
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYT 541
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 161/390 (41%), Gaps = 39/390 (10%)
Query: 214 KGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKE---KNY 270
KG++P + TI N VK + D L++MK +N V + E KN
Sbjct: 253 KGIKPEAYTYNTII--NAYVK--QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNG 308
Query: 271 ML--AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLA 328
+ A+KL +M+ G++ Y +I + N + + + ++ L P + T
Sbjct: 309 KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 329 TLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQPERAVQVFAKMKQI 385
L K ++ AE ++ + ++ +N L+ + A ++ M+Q
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 386 KLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNL 445
D+ T + S F N L + AK+ + R M GV+ S +S NL
Sbjct: 429 GFQADVFTCNTIASCF----------NRLKRYDEAKQ--WLFR-MMEGGVKLSTVSYTNL 475
Query: 446 LNALGEERMIRELIEYFYVAEKLFVYGN-----PSLATDIYNVVLHHLVEAQKGQIAINI 500
++ +E + E A++LFV + P+ T YNV+++ + K + A +
Sbjct: 476 IDVYCKEGNVEE-------AKRLFVEMSSKGVQPNAIT--YNVMIYAYCKQGKIKEARKL 526
Query: 501 FKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQ 560
M+ G PDS TY ++ I + A L S M +G + TYT +I L +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 561 DEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
K +EA L + + G +D ++ +
Sbjct: 587 AGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 27/208 (12%)
Query: 480 IYNVVLHHL-----VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASL 534
+YN V + L V+ K A +F M+ G D Y ++ + K A L
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 535 LISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC 594
L + +G SP + TY ALI + + + A L+ + G+ + ++FNT + C
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 595 YKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS---- 650
K +D +I + M Q+ + + TC + S + ++ A + L RMM
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL----FRMMEGGVK 466
Query: 651 --------------EDGNILREKRRFVD 664
++GN+ KR FV+
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 173/436 (39%), Gaps = 39/436 (8%)
Query: 217 QPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHG------CAKEKNY 270
QP A+ + G K+ ++D+ +R L M+ +S + V + C++ K
Sbjct: 155 QPDVFAYNALING--FCKMNRIDDATRV--LDRMRSKDFSPDTVTYNIMIGSLCSRGK-L 209
Query: 271 MLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL 330
LA K++ Q+ +P+ TY +I+A + + L ++ M LKP T T+
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 331 SVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP--ERAVQVFAKMKQ 384
K +D A + R E P YN LL + +LNQ E ++ KM
Sbjct: 270 IRGMCKEGMVDRAFEMV-RNLELKGCEPDVISYNILLRA--LLNQGKWEEGEKLMTKMFS 326
Query: 385 IKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKN 444
K P++ TY +L + E N+L + M G+ S
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLL-------------KLMKEKGLTPDAYSYDP 373
Query: 445 LLNALGEERMIRELIEYFYVAEKLFVYGN-PSLATDIYNVVLHHLVEAQKGQIAINIFKR 503
L+ A E + IE+ E + G P + YN VL L + K A+ IF +
Sbjct: 374 LIAAFCREGRLDVAIEFL---ETMISDGCLPDIVN--YNTVLATLCKNGKADQALEIFGK 428
Query: 504 MKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
+ G P+S +YN M A +I M+ G P TY ++I L ++
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGY 623
+EA LL R V+ +N L C RI+ ++E M RPN T
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 624 VFSAYVNSGFHNTAIE 639
+ +G+ A+E
Sbjct: 549 LIEGIGFAGYRAEAME 564
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 175/412 (42%), Gaps = 27/412 (6%)
Query: 243 RRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQ 302
R++H Q + + H + NY+ + L+ M G P +I+
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 303 SNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRI-SECLSPHP--Y 359
N + V++I+++ + + A ++ C K ++D A LDR+ S+ SP Y
Sbjct: 138 RNIPKAVRVMEILEKFGQPDVFAYNALINGFC-KMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 360 NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHV 419
N ++ S + + A++V ++ P + TY +L + ML + V
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI-----------EATML-EGGV 244
Query: 420 AKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLAT 478
+ + ++ +M + G++ + ++ + +E M+ E + L + G P + +
Sbjct: 245 DEALKLMD-EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE---MVRNLELKGCEPDVIS 300
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
YN++L L+ K + + +M P+ TY+I++ + A L+ +
Sbjct: 301 --YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
M +G +P +Y LI ++ + + A+ LE DG D++ +NT L C +
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS 650
D I + + PN + +FSA +SG I AL ++ L MMS
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG---DKIRALHMI-LEMMS 466
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%)
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T YN+++ L K +A+ + ++ P TY I+++ + A L+
Sbjct: 193 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
M+ +G P TY +I+ + ++ + A ++ L G + DV+ +N LR +
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
+ + E ++ M EK PN VT + + G A+ L+++ + ++ D
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 175/415 (42%), Gaps = 34/415 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ N +++G A L+ QM +G +P + T+ ++ + + + +++ M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 316 QQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPHP---YNALLASCNVLNQ 371
+ +P L + A ++ +C + + DLA + L+++ + YN ++
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRG-EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA------ 425
+ A +F KM+ + PD+ TY L S + S +LS + + K IN
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LEKNINPDLVFFN 324
Query: 426 ------------IERD-MANNGVQHSH-----LSMKNLLNALGEERMIRELIEYFYVAEK 467
+E + + + V+ H ++ L+ + + + E +E F +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ GN T Y ++H +A+ A +FK+M G HPD TYNI++D
Sbjct: 385 RGLVGN----TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
+ ++A ++ M ++ TYT +I+ L + K + +L L G++ +V+ +
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 588 TFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
T + C K + + + M ++ PN T + A + G + E ++
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 60/399 (15%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
F+ ++ AK + L L QM+ LG+ + TY I +S L +L M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAV 376
+ P ++ TL N+LL N+ AV
Sbjct: 138 KLGYGP---SIVTL-----------------------------NSLLNGFCHGNRISEAV 165
Query: 377 QVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQ 436
+ +M ++ PD T+ L V+ ++H+ ++ + +ER M G Q
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTL------VHGLFQHNK------ASEAVALVER-MVVKGCQ 212
Query: 437 HSHLSMKNLLNAL---GEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
++ ++N L GE + L+ EK G IYN ++ L + +
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKM---EK----GKIEADVVIYNTIIDGLCKYKH 265
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
A ++F +M+ G PD TYN ++ C + AS L+S M+ + +P + A
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 554 LIKILLQDEKFNEALNLL-ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
LI +++ K EA L E + DV+ +NT ++ C +R++ + M Q
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSE 651
+ N VT ++ ++ F + Q++ +M+S+
Sbjct: 386 GLVGNTVT----YTTLIHGFFQARDCDNAQMVFKQMVSD 420
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 131/337 (38%), Gaps = 25/337 (7%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+N +I G K K+ A L +M+ G+KP TY+ +I + D +L M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP 372
++N+ P L K +L AE D + + P YN L+ +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E ++VF +M Q L+ + TY L + GF Q + + M +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTL--IHGFF-----------QARDCDNAQMVFKQMVS 419
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
+GV ++ LL+ L + + F +K + L Y ++ L +A
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR----DMKLDIVTYTTMIEALCKAG 475
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVD--CCSILRSYKSASLLISMMIRQGFSPVTCT 550
K + ++F + L G P+ TY M+ C L+ + A L M G P + T
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK--EEADALFVEMKEDGPLPNSGT 533
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
Y LI+ L+D + L++ R G D F
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 17/260 (6%)
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ A+ +F M + + P I + L S +++++ + ++ M N
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLS-------------AIAKMNKFDLVISLGEQMQN 103
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
G+ H+ + +N + + KL YG PS+ T N +L+
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKL-GYG-PSIVT--LNSLLNGFCHGN 159
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A+ + +M GY PD+ T+ +V A L+ M+ +G P TY
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
A+I L + + + ALNLL + I+ DV+++NT + C + +D + M +
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 613 KVRPNPVTCGYVFSAYVNSG 632
++P+ T + S N G
Sbjct: 280 GIKPDVFTYNPLISCLCNYG 299
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 38/354 (10%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++N V+ + K + +A L +M+ + P TY +I + + F L L+
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK 215
Query: 315 MQQENLKP---LNSTLATLS-VIC--SKALQLDLAESFLDRISEC-LSPH--PYNALLAS 365
M+Q+ + L S L LS +C SKA+ S R+ ++P YN+++
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRRLCDYSKAI------SIFSRLKRSGITPDLVAYNSMINV 269
Query: 366 CNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA 425
A + +M + +LP+ +Y L S++ E+ L L V +
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVY------VENHKFLEALSVFAEMKE 323
Query: 426 IE--RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNV 483
+ D+ + +++ G+ M++E F+ K+ + P++ + YN
Sbjct: 324 VNCALDLTTCNI---------MIDVYGQLDMVKEADRLFWSLRKMDI--EPNVVS--YNT 370
Query: 484 VLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG 543
+L EA+ AI++F+ M+ + TYN M+ ++ A+ L+ M +G
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
P TY+ +I I + K + A L ++ R G+++D +L+ T + Y+R
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI--VAYER 482
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHL 488
+M + + L+ + G+E M + + E+ V G+ L +++ + L
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELS-RRL 238
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ K AI+IF R+K G PD YN M++ + ++ A LLI M G P T
Sbjct: 239 CDYSK---AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
+Y+ L+ + +++ KF EAL++ + LD+ N + + + +
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
+ + + PN V+ + Y + AI +++
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 148/383 (38%), Gaps = 60/383 (15%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQS-NFRDGLGVLK 313
++F+ +I + + A + MK G++P+ TY+ +I A F+
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 314 IMQQENLKPLNSTLATLSVICSKALQLDLAESFLD-----RISECLSPHPYNALLASCNV 368
MQ+ ++P T +L +CS+ + A + D RI + + YN LL +
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV--FSYNTLLDAICK 386
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER 428
Q + A ++ A+M +++P++ +Y S ++ A R +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSY----------------STVIDGFAKAGRFD---- 426
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHL 488
LN GE R Y +A L YN +L
Sbjct: 427 ---------------EALNLFGEMR-------YLGIA----------LDRVSYNTLLSIY 454
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ + + A++I + M G D TYN ++ Y + + M R+ P
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TY+ LI + + EA+ + + G++ DV+L++ + C + +++
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 609 MHQEKVRPNPVTCGYVFSAYVNS 631
M +E + PN VT + A+ S
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRS 597
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 122/286 (42%), Gaps = 22/286 (7%)
Query: 357 HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ 416
+ ++AL+++ E A+ VF MK+ L P++ TY + G ++
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ------ 322
Query: 417 LHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLF-VYGNPS 475
VAK + ++R NGVQ ++ +LL + + A LF N
Sbjct: 323 --VAKFFDEMQR----NGVQPDRITFNSLLAVCSRGGL-------WEAARNLFDEMTNRR 369
Query: 476 LATDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
+ D+ YN +L + + + +A I +M + P+ +Y+ ++D + + A
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
L M G + +Y L+ I + + EAL++L GI+ DV+ +N L
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
+ + D ++ + M +E V PN +T + Y G + A+E
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 44/422 (10%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++N +I G + A L+ + + G PS Y+ I+ + L V +
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQ 371
M+++ L++ + ++C +A +LD A D + + L P+ N ++ +
Sbjct: 369 MKKDAAPNLSTYNILIDMLC-RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ-LHVAKRINAIE--- 427
+ A +F +M PD T+ L G V + + + L R N+I
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 428 --RDMANNGVQH-SHLSMKNLLN------------------ALGEERMIRELIEYFYVAE 466
++ N+G + H K+++N GE R + E +
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE--IKA 545
Query: 467 KLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD----C 522
+ FV S Y++++H L++A +F MK G D+ YNI++D C
Sbjct: 546 RRFVPDARS-----YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
+ ++Y+ L+ M +GF P TY ++I L + ++ +EA L E + I+L+
Sbjct: 601 GKVNKAYQ----LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 583 VLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
V+++++ + RID LI+E + Q+ + PN T + A V + N A+ Q
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 643 VL 644
+
Sbjct: 717 SM 718
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 154/369 (41%), Gaps = 23/369 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S+N ++ A+ +N+ +++ +M + G PS T ++ + R+G V+++M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC---LSPHPYNALLASCNVLNQP 372
++ +P S TL S D+ + ++ E + H + L+ +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVA-KRINAIERDMA 431
+ A+ + +MK L DI Y + FG V ++ +A K + IE
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKV----------GKVDMAWKFFHEIEA--- 266
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
NG++ ++ +++ L + + E +E F EK T YN ++ A
Sbjct: 267 -NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK----NRRVPCTYAYNTMIMGYGSA 321
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
K A ++ +R + G P YN ++ C + A L + +++ +P TY
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA-LKVFEEMKKDAAPNLSTY 380
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
LI +L + K + A L + + G+ +V N + + C +++D + E M
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 612 EKVRPNPVT 620
+ P+ +T
Sbjct: 441 KVCTPDEIT 449
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 144/361 (39%), Gaps = 31/361 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F +I G K A K+ +M + +S Y +I+ DG + K M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQP 372
+N P L T KA + + + + I Y+ L+
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLF---GFVNSPYE----------HSNMLSQLHV 419
++F MK+ + D R Y ++ F G VN Y+ +++ V
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 420 AKRINAIER---------DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFV 470
+ I+R + + ++ + + +L++ G+ + + E + + E+L
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK---VGRIDEAYLILEELMQ 685
Query: 471 YG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSY 529
G P+L T +N +L LV+A++ A+ F+ MK P+ TY I+++ +R +
Sbjct: 686 KGLTPNLYT--WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 530 KSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTF 589
A + M +QG P T +YT +I L + EA L +R + +G D +N
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 590 L 590
+
Sbjct: 804 I 804
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 38/320 (11%)
Query: 302 QSNFRDGLGVLKIMQQENLKPLNSTLAT----LSVICSKALQLDLAESFLDRISECLSPH 357
Q NFR G I+ + +S+++ L+++ + L+ D + + S C +
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET-- 172
Query: 358 PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
+ + A + ++ + PD TY L +H L
Sbjct: 173 ------------GRVDEAKDLMKELTEKHSPPDTYTYNFLL----------KHLCKCKDL 210
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
HV RD + V+ +S L++ + + +RE + Y+ KL GN
Sbjct: 211 HVVYEFVDEMRD--DFDVKPDLVSFTILIDNVCNSKNLREAM---YLVSKL---GNAGFK 262
Query: 478 TD--IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
D +YN ++ KG A+ ++K+MK G PD TYN ++ S + A +
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ M+ G+ P T TYT+L+ + + + AL+LLE G + +NT L C
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 596 KRRIDIIELIVEYMHQEKVR 615
R +D + E M V+
Sbjct: 383 ARLMDKGMELYEMMKSSGVK 402
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFY-VAEKLFVYGNPSLATDIYNVVLHHL 488
M NNG++ ++ + +L E + E + + EK + P T YN +L HL
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK---HSPPDTYT--YNFLLKHL 204
Query: 489 VEAQKGQIAINIFKRMKL-CGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
+ + + M+ PD ++ I++D ++ + A L+S + GF P
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE 607
Y ++K K +EA+ + ++ + +G++ D + +NT + R++ + ++
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 608 YMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
M P+ T + + G E+L LSL
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKG------ESLGALSL 357
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 215/516 (41%), Gaps = 72/516 (13%)
Query: 216 VQPLGLAHQTISTG-NKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAK 274
V P + + TI +KK +++ L EL + R ++N++++G K + A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 275 KLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVIC 334
+++ MK V P CTY+ +I + R+GL ++ M+ L+P T TL C
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 335 SKALQLDLAESFLDRISECLSPHPYNALLASCNV----LNQPERAVQVFAKMKQI----K 386
+ L L L ++ E + A + N+ L + E+ V K+K++
Sbjct: 356 FE-LGLSLEAR---KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 387 LLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIE--RDMANNGVQHSHLSMKN 444
PDI TY H+ + + L V A+E R+M G++ + +++
Sbjct: 412 FSPDIVTY---------------HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 445 LLNALGEERMIRE----------------------LIEYFYVAEKL-----------FVY 471
+L+AL +ER + E LI F+ EK+ V
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 472 GNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYN-IMVDCCSILRSYK 530
P+++T +N ++ L K ++A+ F + G PD T+N I++ C R K
Sbjct: 517 ITPTVST--FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 531 SASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
A + I+ F P T L+ L ++ +ALN T ++ ++D + +NT +
Sbjct: 575 -AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF-NTLIEEREVDTVTYNTMI 632
Query: 591 RQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRM-- 648
C +++ ++ M ++ + P+ T S + G + E L+ S +
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGS 692
Query: 649 MSEDGNILREKRRFVDEFI--LAEDSAAESDILVKL 682
M D + EK E L ++ A SD++ +L
Sbjct: 693 MKRDLQVETEKNPATSESKEELNTEAIAYSDVIDEL 728
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 28/381 (7%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQE-NLKPLNSTLATLS 331
A+++ M +GV + T++ ++ + D LG+L+ M E + P N T T+
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 332 VICSKALQL-DLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLL 388
SK +L DL E LD L P+ YN L+ L + A Q+ MKQ +L
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 389 PDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA 448
PD+ TY +L + G N+ +M L + + +++ +Q ++ L++
Sbjct: 308 PDLCTYNILIN--GLCNA----GSMREGLELMDAMKSLK-------LQPDVVTYNTLIDG 354
Query: 449 ---LGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM- 504
LG R+L+E E V N +N+ L L + +K + K +
Sbjct: 355 CFELGLSLEARKLMEQM---ENDGVKANQV----THNISLKWLCKEEKREAVTRKVKELV 407
Query: 505 KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKF 564
+ G+ PD TY+ ++ + A ++ M ++G T T ++ L ++ K
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 565 NEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYV 624
+EA NLL G +D + + T + + +++ + + M + K+ P T +
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Query: 625 FSAYVNSGFHNTAIEALQVLS 645
+ G A+E L+
Sbjct: 528 IGGLCHHGKTELAMEKFDELA 548
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 43/284 (15%)
Query: 354 LSPHPYNAL----LASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYE 409
LSP P AL L++ +P A+Q+F KM ++KL P++ T L L G V P
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTL--LIGLVRYPSS 182
Query: 410 HSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLN----------ALGEERMIRELI 459
S + A+ + DM GV + + L+N ALG M+ ++
Sbjct: 183 FS-----ISSAREVF---DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG---MLERMV 231
Query: 460 EYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIA--INIFKRMKLCGYHPDSETYN 517
F V NP T YN +L + ++KG+++ + MK G P+ TYN
Sbjct: 232 SEFKV--------NPDNVT--YNTILKAM--SKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 518 IMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLD 577
+V L S K A ++ +M + P CTY LI L E L L++ +
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 578 GIQLDVLLFNTFLRQACYKRRIDI-IELIVEYMHQEKVRPNPVT 620
+Q DV+ +NT + C++ + + ++E M + V+ N VT
Sbjct: 340 KLQPDVVTYNTLI-DGCFELGLSLEARKLMEQMENDGVKANQVT 382
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 148/398 (37%), Gaps = 78/398 (19%)
Query: 283 LGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSK---ALQ 339
L PS +D + A + L + + M + LKP T TL + + +
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 340 LDLAESFLD---RISECLSPHPYNALLASCNVLNQPERAVQVFAKM-KQIKLLPDIRTYE 395
+ A D +I L+ +N L+ + + E A+ + +M + K+ PD TY
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY- 243
Query: 396 LLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNL------L 446
+ +L + R++ ++ DM NG+ + ++ NL L
Sbjct: 244 ---------------NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKL 288
Query: 447 NALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKL 506
+L E I EL++ V P L T YN++++ L A + + + MK
Sbjct: 289 GSLKEAFQIVELMKQTNVL--------PDLCT--YNILINGLCNAGSMREGLELMDAMKS 338
Query: 507 CGYHPDSETYNIMVDCCSILRSYKSASLLISMMIR------------------------- 541
PD TYN ++D C L A L+ M
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 542 -----------QGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
GFSP TY LIK L+ + AL ++ GI+++ + NT L
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 591 RQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAY 628
C +R++D ++ H+ + VT G + +
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 173/412 (41%), Gaps = 31/412 (7%)
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
R+++N +IHG K+ A +L+ QM+ G +P+ TY +I + L L+
Sbjct: 215 RFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 314 IMQQENLKPLNSTLATLSVICSKAL----QLDLAESFLDRISECLSPHPYNALLASCNVL 369
+M+ L P +T+ T + L ++ F+++ S L Y+A+L +
Sbjct: 275 MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSN-LQRVGYDAVLYCLSNN 333
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLF--------------GFVNSPYE-----H 410
+ + Q K+ + +PD T+ S GFV+ + +
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 411 SNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
++ L A+R + +R M +G+ S S +++ L + R I + +
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ +P+L T +N L + + +++ + G+ PD T++++++C +
Sbjct: 454 RGI--SPNLVT--FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
K A M+ G P TY LI+ + ++ L + + +G+ D+ +N
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 588 TFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
++ C R++ E +++ M + ++P+ T + A SG + A E
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 496 IAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALI 555
+++ + K ++ GY E +++ L K + + + + G P T Y A+I
Sbjct: 128 LSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVI 187
Query: 556 KILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVR 615
L++ + A ++ R DG + D +N + C K +D +V+ M QE R
Sbjct: 188 DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNR 247
Query: 616 PNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEFILAEDSAAE 675
PN T + ++ +G + A++ L+++ +R ++ + +R FV
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT---FVHGIFRCLPPCKA 304
Query: 676 SDILVKLFEDSEDEFAVGLLNLRWC 700
++LV E + VG + +C
Sbjct: 305 FEVLVGFMEKDSNLQRVGYDAVLYC 329
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 165/424 (38%), Gaps = 34/424 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+N ++ C KE+ L M + G+ P + T++ +I+A S + M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP 372
++ KP T L KA D L+ + E P YN +++S +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM-ESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAK-----RINAIE 427
+ + ++ KM++ L+PDI T+ S + S + S + + + R N+I
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 428 RDMANNGVQHSHL--SMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT-DIYNVV 484
++ G L K L + IRE N LA+ YN+
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFES------IRE---------------NDDLASLQSYNIW 332
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
L LV K A + K+M G P +YNI++D L A ++ +M R G
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
P TY L+ K + A +LL+ + + N L RI E
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 605 IVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVD 664
++ M+++ + VTC + SG + AIE ++ + + + GN+ VD
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 665 EFIL 668
+ ++
Sbjct: 513 DSLI 516
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 137/362 (37%), Gaps = 44/362 (12%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+S+N ++ G K AK ++ MK GV P + TY ++ +L+
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVL----- 369
M + N P T L K ++ AE L +++E Y +CN++
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE----KGYGLDTVTCNIIVDGLC 477
Query: 370 --NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIE 427
+ ++A+++ +K +++ L S G V+ +N L L
Sbjct: 478 GSGELDKAIEI---VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL---------- 524
Query: 428 RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYF--YVAEKLFVYGNPSLATDIYNVVL 485
++ LLN L + E F + EKL P YN+ +
Sbjct: 525 ------------ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL----QPDSVA--YNIFI 566
Query: 486 HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFS 545
HH + K A + K M+ G H ETYN ++ I L+ M +G S
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 546 PVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELI 605
P CTY I+ L + EK +A NLL+ I +V F + C D+ + +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 606 VE 607
E
Sbjct: 687 FE 688
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 154/379 (40%), Gaps = 38/379 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S+N + G + ++ A+ ++ QM G+ PS +Y+ ++ D ++ +M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI--SECLSPHPY--NALLASCNVLNQ 371
++ + P T L ++D A+S L + + CL P+ Y N LL S + +
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWKMGR 446
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A ++ KM + D T ++ G S + + + K +
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVD--GLCGS----GELDKAIEIVKGMRV------ 494
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN--PSLATDIYNVVLHHLV 489
H ++ NL N+ Y + + + N P L T Y+ +L+ L
Sbjct: 495 -----HGSAALGNLGNS------------YIGLVDDSLIENNCLPDLIT--YSTLLNGLC 535
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+A + A N+F M PDS YNI + SA ++ M ++G
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
TY +LI L + E L++ + GI ++ +NT ++ C +++ +++ M
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 610 HQEKVRPNPVTCGYVFSAY 628
Q+ + PN + Y+ A+
Sbjct: 656 MQKNIAPNVFSFKYLIEAF 674
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 435 VQHSHLS-MKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
+Q + LS + ++++ + I + F + F PS+ +YN++L ++ ++
Sbjct: 70 IQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVY--LYNLLLESCIKERR 127
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
+ ++K M LCG P + T+N+++ +A L M +G P T+
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGI 187
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
L++ + ++ L LL G+ + +++NT + C + R D E +VE M +E
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 614 VRPNPVTCGYVFSAYVNSG 632
+ P+ VT SA G
Sbjct: 248 LVPDIVTFNSRISALCKEG 266
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 473 NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSA 532
N + T YN+++H L +A K A NIF + + G PD +TYN+M+ S+ R+ K
Sbjct: 9 NMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEK-- 66
Query: 533 SLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQ 592
L + MIR+G P T TY ++I L + K +A + FNT +
Sbjct: 67 --LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLING 115
Query: 593 ACYKRRI-DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
C R+ D + L E M++ + N +T + + G NTA++ Q
Sbjct: 116 YCKATRVKDGMNLFCE-MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 161/406 (39%), Gaps = 58/406 (14%)
Query: 256 SFNDVIHG---CAK-EKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGV 311
+FN VI G C + ++ +M +K++ + G++P+ TY +++ + D V
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVER----GMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 312 LKIMQQENLKP-----------------LNSTLATLSVICSKALQLDLAESFLDRISECL 354
LK M ++ P LN + ++ SK L L
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL-------------- 398
Query: 355 SPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNML 414
+ YN L+ Q + A ++ +M I + ++ + L H
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL------CSHLMFD 452
Query: 415 SQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIE-YFYVAEKLFVYGN 473
S L + + R+M+ G + L++ L + + +E +F K FV
Sbjct: 453 SALRFVGEM--LLRNMSPGGGL-----LTTLISGLCKHGKHSKALELWFQFLNKGFV--- 502
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
+ T N +LH L EA K A I K + G D +YN ++ C + A
Sbjct: 503 --VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
+ + M+++G P TY+ LI L K EA+ + + +G+ DV ++ +
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
C R + + + M + V+PN V ++ AY SG + A+E
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 392 RTYELLFSLF--GFVNSPYEHSNMLSQLHVAKRINA---IERDMANNGVQHSHLSMKNLL 446
+ EL F GFV + +L L A +++ I++++ G +S L+
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 447 NALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMK 505
+ ++ +L E F +++ G P T Y++++ L K + AI + K
Sbjct: 548 SGCCGKK---KLDEAFMFLDEMVKRGLKPDNYT--YSILICGLFNMNKVEEAIQFWDDCK 602
Query: 506 LCGYHPDSETYNIMVD-CCS----------------------------ILRSY-KSASLL 535
G PD TY++M+D CC ++R+Y +S L
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 536 ISMMIRQ-----GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
+++ +R+ G SP + TYT+LIK + + EA L E R++G++ +V + +
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 591 RQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
++ +E ++ MH + V PN +T + Y G
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIY--NVVLHH 487
+AN G+ S + LL +L ++ E F V K ++ D+Y ++
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-------GVSPDVYLFTTAINA 269
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
+ K + A+ +F +M+ G P+ T+N ++D + Y A + M+ +G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN----TFLRQACYKRRIDIIE 603
TY+ L+K L + ++ +A +L+ G +V+++N +F+ + I+I +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 604 LIV 606
L+V
Sbjct: 390 LMV 392
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 160/402 (39%), Gaps = 74/402 (18%)
Query: 306 RDG----LGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPY-- 359
RDG L V ++ + + P +T L +A + D + + +SP Y
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLF 263
Query: 360 -NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYE--------- 409
A+ A C + E AV++F+KM++ + P++ T+ + G E
Sbjct: 264 TTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 410 ----------HSNMLSQLHVAKRINA---IERDMANNGVQHSHLSMKNLLNALGEERMIR 456
+S ++ L AKRI + ++M G + + NL+++ E +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 457 ELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETY 516
+ IE + L V SL + YN ++ + + A + K M G++ + ++
Sbjct: 383 KAIE----IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 517 -NIMVDCCS--------------ILRSYKSASLLISMMI--------------------R 541
+++ CS +LR+ L++ +I
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 542 QGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDI 601
+GF T T AL+ L + K +EA + + G +D + +NT + C K+++D
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 602 IELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFH-NTAIEALQ 642
+ ++ M + ++P+ Y +S + F+ N EA+Q
Sbjct: 559 AFMFLDEMVKRGLKPD----NYTYSILICGLFNMNKVEEAIQ 596
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 32/316 (10%)
Query: 282 ILGVKPSSCTYDGIIQAASFQSNFR---DGLGVLKIMQQENLKPLNSTLATLSVICSKAL 338
++ + S+ G+ +A FR + LG +M + + L +S C K
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL------ISGCCGKK- 554
Query: 339 QLDLAESFLDR-ISECLSPHPYNALLASCNV--LNQPERAVQVFAKMKQIKLLPDIRTYE 395
+LD A FLD + L P Y + C + +N+ E A+Q + K+ +LPD+ TY
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 396 LLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA-LGEERM 454
++ E ++ + +++ N V ++HL + L
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEM--------MSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 455 IRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSE 514
+RE +++ ++ P+ AT Y ++ + + + A +F+ M++ G P+
Sbjct: 667 LREDMKHKGIS--------PNSAT--YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 515 TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERT 574
Y ++D L L+ M + P TYT +I +D EA LL
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 575 RLDGIQLDVLLFNTFL 590
R GI D + + F+
Sbjct: 777 REKGIVPDSITYKEFI 792
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 161/406 (39%), Gaps = 58/406 (14%)
Query: 256 SFNDVIHG---CAK-EKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGV 311
+FN VI G C + ++ +M +K++ + G++P+ TY +++ + D V
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVER----GMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 312 LKIMQQENLKP-----------------LNSTLATLSVICSKALQLDLAESFLDRISECL 354
LK M ++ P LN + ++ SK L L
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL-------------- 398
Query: 355 SPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNML 414
+ YN L+ Q + A ++ +M I + ++ + L H
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL------CSHLMFD 452
Query: 415 SQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIE-YFYVAEKLFVYGN 473
S L + + R+M+ G + L++ L + + +E +F K FV
Sbjct: 453 SALRFVGEM--LLRNMSPGGGL-----LTTLISGLCKHGKHSKALELWFQFLNKGFV--- 502
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
+ T N +LH L EA K A I K + G D +YN ++ C + A
Sbjct: 503 --VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
+ + M+++G P TY+ LI L K EA+ + + +G+ DV ++ +
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
C R + + + M + V+PN V ++ AY SG + A+E
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 392 RTYELLFSLF--GFVNSPYEHSNMLSQLHVAKRINA---IERDMANNGVQHSHLSMKNLL 446
+ EL F GFV + +L L A +++ I++++ G +S L+
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 447 NALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMK 505
+ ++ +L E F +++ G P T Y++++ L K + AI + K
Sbjct: 548 SGCCGKK---KLDEAFMFLDEMVKRGLKPDNYT--YSILICGLFNMNKVEEAIQFWDDCK 602
Query: 506 LCGYHPDSETYNIMVD-CCS----------------------------ILRSY-KSASLL 535
G PD TY++M+D CC ++R+Y +S L
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 536 ISMMIRQ-----GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
+++ +R+ G SP + TYT+LIK + + EA L E R++G++ +V + +
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 591 RQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
++ +E ++ MH + V PN +T + Y G
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIY--NVVLHH 487
+AN G+ S + LL +L ++ E F V K ++ D+Y ++
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-------GVSPDVYLFTTAINA 269
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
+ K + A+ +F +M+ G P+ T+N ++D + Y A + M+ +G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN----TFLRQACYKRRIDIIE 603
TY+ L+K L + ++ +A +L+ G +V+++N +F+ + I+I +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 604 LIV 606
L+V
Sbjct: 390 LMV 392
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 160/402 (39%), Gaps = 74/402 (18%)
Query: 306 RDG----LGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPY-- 359
RDG L V ++ + + P +T L +A + D + + +SP Y
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLF 263
Query: 360 -NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYE--------- 409
A+ A C + E AV++F+KM++ + P++ T+ + G E
Sbjct: 264 TTAINAFCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 410 ----------HSNMLSQLHVAKRINA---IERDMANNGVQHSHLSMKNLLNALGEERMIR 456
+S ++ L AKRI + ++M G + + NL+++ E +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 457 ELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETY 516
+ IE + L V SL + YN ++ + + A + K M G++ + ++
Sbjct: 383 KAIE----IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 517 -NIMVDCCS--------------ILRSYKSASLLISMMI--------------------R 541
+++ CS +LR+ L++ +I
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 542 QGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDI 601
+GF T T AL+ L + K +EA + + G +D + +NT + C K+++D
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 602 IELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFH-NTAIEALQ 642
+ ++ M + ++P+ Y +S + F+ N EA+Q
Sbjct: 559 AFMFLDEMVKRGLKPD----NYTYSILICGLFNMNKVEEAIQ 596
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 32/316 (10%)
Query: 282 ILGVKPSSCTYDGIIQAASFQSNFR---DGLGVLKIMQQENLKPLNSTLATLSVICSKAL 338
++ + S+ G+ +A FR + LG +M + + L +S C K
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL------ISGCCGKK- 554
Query: 339 QLDLAESFLDR-ISECLSPHPYNALLASCNV--LNQPERAVQVFAKMKQIKLLPDIRTYE 395
+LD A FLD + L P Y + C + +N+ E A+Q + K+ +LPD+ TY
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 396 LLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA-LGEERM 454
++ E ++ + +++ N V ++HL + L
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEM--------MSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 455 IRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSE 514
+RE +++ ++ P+ AT Y ++ + + + A +F+ M++ G P+
Sbjct: 667 LREDMKHKGIS--------PNSAT--YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 515 TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERT 574
Y ++D L L+ M + P TYT +I +D EA LL
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 575 RLDGIQLDVLLFNTFL 590
R GI D + + F+
Sbjct: 777 REKGIVPDSITYKEFI 792
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 159/365 (43%), Gaps = 40/365 (10%)
Query: 284 GVKPSSCTYDGIIQAASFQSNFR------DGLGVLKIMQQENLKPLNSTLATLSVICSKA 337
G K ++ Y+ +I++ F+ D + K++ +E T A +S ++A
Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-------TFALISRRYARA 175
Query: 338 LQLDLAESFLDRISEC---LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTY 394
++ A ++ E + +N +L + + A +VF KMK+ + PDI++Y
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSY 235
Query: 395 ELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERM 454
+L +G + N+L R++ + R+M + G + ++ ++NA + +
Sbjct: 236 TILLEGWG------QELNLL-------RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 455 IRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSE 514
E I +F E+ +P I+ +++ L +K A+ F+R K G+ ++
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPH----IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAP 338
Query: 515 TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERT 574
TYN +V + + A + M +G P TY ++ L++ ++ EA + +
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Query: 575 RLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFH 634
+ V + +R C K R+D+ I + M + V P ++FS+ + + H
Sbjct: 399 ---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM----HMFSSLITALCH 451
Query: 635 NTAIE 639
++
Sbjct: 452 ENKLD 456
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 115/288 (39%), Gaps = 20/288 (6%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
YNAL+ S + Q + + MK KLL F ++ Y +
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSK--------ETFALISRRYARAR-----K 177
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYF-YVAEKLFVYGNPSLA 477
V + I A + M G + +L+ L + R + + + F + +K F P +
Sbjct: 178 VKEAIGAFHK-MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRF---EPDIK 233
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
+ Y ++L + + + MK G+ PD Y I+++ + Y+ A +
Sbjct: 234 S--YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
M ++ P + +LI L ++K N+AL ER++ G L+ +N + C+ +
Sbjct: 292 EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLS 645
R++ V+ M + V PN T + + A E Q +S
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 428 RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHH 487
+ +A G + S +S LL A+ ++ + E+ L + +N V++
Sbjct: 69 KTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ----SGTKLDSIFFNAVINA 124
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG---F 544
E+ + A+ +MK G +P + TYN ++ I + +S L+ +M+ +G
Sbjct: 125 FSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDV 184
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDII-- 602
P T+ L++ + +K EA ++++ G++ D + +NT CY ++ + +
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRA 242
Query: 603 --ELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
E++ + + +EK +PN TCG V Y G
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREG 274
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 172/443 (38%), Gaps = 95/443 (21%)
Query: 271 MLAKKLIV--QMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLA 328
M++K L V Q K KP+S TY+ +I L +MQ+ + ++
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVI---------------LMLMQEGQHEKVHEVYT 221
Query: 329 TLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLL 388
+ C++ + F D I+ Y+AL++S L + + A+++F +MK +
Sbjct: 222 EM---CNEG------DCFPDTIT-------YSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265
Query: 389 PDIRTYELLFSLF-------------------GFVNSPYEHSNMLSQLHVAKRIN---AI 426
P + Y L ++ G + Y ++ ++ L A R++
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 427 ERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLH 486
+DM +G+ + + NL+N LG+ + EL F +E P++ + YN V+
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF--SEMGMWRCTPTVVS--YNTVIK 381
Query: 487 HLVEAQKGQIAIN-IFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFS 545
L E++ ++ F +MK P TY+I++D + A LL+ M +GF
Sbjct: 382 ALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 546 PVTCTYTALIKILLQDEKF-----------------------------------NEALNL 570
P Y +LI L + +++ +EA++L
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 571 LERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVN 630
+ G DV +N + I+ ++ M + R + + + + +
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 631 SGFHNTAIEALQVLSLRMMSEDG 653
+G AIE + + + DG
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDG 584
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 21/270 (7%)
Query: 256 SFNDVIHGCAKEKNYML-AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
S+N VI + K ++ +MK V PS TY +I + L +L+
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC---LSPHPYNALLASCNVLNQ 371
M ++ P + +L KA + + A + E +S Y ++ +
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
AV +F +MK PD+ Y L S G V + M+++ N++ R M
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMS--GMVKA-----GMINE------ANSLLRKME 541
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
NG + S +LN + R IE F + + P T YN +L A
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI--KPDGVT--YNTLLGCFAHA 597
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVD 521
+ A + + MK G+ D+ TY+ ++D
Sbjct: 598 GMFEEAARMMREMKDKGFEYDAITYSSILD 627
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 438 SHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN--VVLHHLVEAQKGQ 495
S + LL A R +I Y ++K+ +YG ++ D+Y+ +++H +
Sbjct: 70 SIVDFTRLLTATANLRRYETVI---YFSQKMELYG---ISHDLYSFTILIHCFCRCSRLS 123
Query: 496 IAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALI 555
A+++ +M GY P T+ ++ ++ A L+ +M++ G+ P Y LI
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 556 KILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVR 615
L ++ + N AL LL G+ DV+ +NT L CY R ++ M + +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 616 PNPVTCGYVFSAYVNSG 632
P+ VT + +V G
Sbjct: 244 PDVVTFTALIDVFVKQG 260
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/404 (17%), Positives = 160/404 (39%), Gaps = 25/404 (6%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+SF +IH + A ++ +M LG +PS T+ ++ + D ++ +
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQ 371
M + +P TL K +L++A L+ + + YN LL +
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A ++ M + + PD+ T+ L +F + N+ + ++M
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVF------VKQGNL-------DEAQELYKEMI 273
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
+ V ++++ +++N L + + + F + + P++ T YN ++ +
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF--PNVVT--YNTLISGFCKF 329
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+ + +F+RM G++ D TYN ++ + + A + M+ + +P T+
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
L+ L + + AL + R + ++ +N + C +++ + +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 612 EKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNI 655
E V+P+ T + +G A E +R M E+G I
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADEL-----IRRMKEEGII 488
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 165/398 (41%), Gaps = 31/398 (7%)
Query: 229 GNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPS 288
G K I+ L++L +R L + K+ SF C K++ A K + L + P+
Sbjct: 414 GRIKDCISLLEDLDQRDLLDMDKIYHASF---FKACKKQR----AVKEAFRFTKLILNPT 466
Query: 289 SCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLD 348
T++ ++ + + GVL+++Q+ + TL C+K+ ++D
Sbjct: 467 MSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFH 526
Query: 349 RISEC---LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVN 405
++S + H + AL+ C Q +A + ++ + PD + L S G
Sbjct: 527 QMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSG 586
Query: 406 SPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVA 465
+ ++L+++ + I+ D H+S+ L+ A + E + +
Sbjct: 587 AVDRAFDVLAEMKA--ETHPIDPD---------HISIGALMKACCNAGQVERAKEVYQMI 635
Query: 466 EKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSI 525
K + G P ++Y + ++ ++ A +I+K MK PD ++ ++D
Sbjct: 636 HKYGIRGTP----EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGH 691
Query: 526 LRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLL 585
+ A ++ QG T +Y++L+ + + +AL L E+ + ++ +
Sbjct: 692 AKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIST 751
Query: 586 FNTFLRQACYKRRIDIIELIVEYMHQEK---VRPNPVT 620
N + C + + +EY+ + K ++PN +T
Sbjct: 752 MNALITALCEGNQ---LPKAMEYLDEIKTLGLKPNTIT 786
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 130/338 (38%), Gaps = 30/338 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+ +I CAK ++ QM GV+ + T+ +I + G I++
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYN-------ALLASCNVL 369
+N+KP L C ++ +D A L + HP + AL+ +C
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKA--ETHPIDPDHISIGALMKACCNA 622
Query: 370 NQPERAVQVFAKMKQ--IKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIE 427
Q ERA +V+ + + I+ P++ T + N S+ +I
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAV---------------NSCSKSGDWDFACSIY 667
Query: 428 RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHH 487
+DM V + L++ G +M+ E A+ + L T Y+ ++
Sbjct: 668 KDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGI----RLGTISYSSLMGA 723
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
A+ + A+ +++++K P T N ++ A + + G P
Sbjct: 724 CCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLL 585
T TY+ L+ + + F + LL + + DG+ ++++
Sbjct: 784 TITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIM 821
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 27/289 (9%)
Query: 354 LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL---FSLFGFVNSPYEH 410
L+P YN LL+S E +++ +M + + PDI T+ L + G+V ++
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 411 SNMLSQLHV----------------AKRINA---IERDMANNGVQHSHLSMKNLLNALGE 451
L Q K ++A + ++M NG + +S L+ L E
Sbjct: 178 VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFE 237
Query: 452 ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
+ I E + + N Y V++ L + + A+N+FK+M G P
Sbjct: 238 AKKIDEALSLLVKMKD----DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 512 DSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
D Y +++ + AS L+ M+ G P TY ALIK + + ++A+ LL
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLL 352
Query: 572 ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+ + D++ +NT + C +D ++ M + + PN T
Sbjct: 353 SKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 143/345 (41%), Gaps = 24/345 (6%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++ V+ G + A ++ +M G +P+ Y +I+ S F D + VLK
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFL-DRISECLSPHP--YNALLASCNVLNQ 371
M+++ + P +L + SKA ++D A SFL + + L P+ Y A ++ ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A + +M++ +LP+ ++L + G +N + ++ R M
Sbjct: 538 FASADKYVKEMRECGVLPN----KVLCT--GLINEYCKKGKVIEACSAY-------RSMV 584
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVVLHHLV 489
+ G+ + L+N L + + + E F +A D+ Y V+++
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR------GKGIAPDVFSYGVLINGFS 638
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ Q A +IF M G P+ YN+++ + A L+ M +G P
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC 594
TY +I + EA L + +L G+ D ++ T + C
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 163/391 (41%), Gaps = 37/391 (9%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+ +N +I G +K K A+ +V+M G+KP++ TY I S F +K
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 315 MQQENLKPLNSTLAT--LSVICSKALQLDLAESFLDRISECL--SPHPYNALLASCNVLN 370
M++ + P N L T ++ C K ++ ++ + + + Y L+ +
Sbjct: 548 MRECGVLP-NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ + A ++F +M+ + PD+ +Y +L N S+L ++ ++I +M
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLI-------------NGFSKLGNMQKASSIFDEM 653
Query: 431 ANNGVQHSHLSMKNLLNAL---GEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLH 486
G+ + + LL GE +EL++ ++ V G +P+ T Y ++
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD------EMSVKGLHPNAVT--YCTIID 705
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
++ A +F MKL G PDS Y +VD C L + A + I ++G +
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCAS 764
Query: 547 VTCTYTALIKILL---QDEKFNEALNLLERTRLD--GIQLDVLLFNTFLRQACYKRRIDI 601
T + ALI + + E E LN L D G DV +N + C + ++
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEA 823
Query: 602 IELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+ + M + P +T + + Y G
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
LVE +K I I+ + TY +V A ++ MI G P
Sbjct: 405 LVEMKKRNIVISPY-------------TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE 607
YT LIK LQ+ +F +A+ +L+ + GI D+ +N+ + +R+D +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 608 YMHQEKVRPNPVTCGYVFSAYVNS 631
M + ++PN T G S Y+ +
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEA 535
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 148/364 (40%), Gaps = 28/364 (7%)
Query: 234 KIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYD 293
KI+K E+SR + +K +++ +I+G K K++ A + M G+KP Y+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 294 GIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESF--LDRIS 351
II A N + +K MQ+ +P T + +I A D+ S D +
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF--MPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 352 EC---LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPY 408
C + H +N L+ Q E+AV++ +M + + TY + + V
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 409 EHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL 468
+ ++L N G+ + + LL A + ++ + K
Sbjct: 677 KAFEYFTRLQ-------------NEGLDVDIFTYEALLKACCKSGRMQSAL----AVTKE 719
Query: 469 FVYGNPSLATDIYNVVLHHLVEAQKGQI--AINIFKRMKLCGYHPDSETYNIMVDCCSIL 526
N + +YN+++ A++G + A ++ ++MK G PD TY + CS
Sbjct: 720 MSARNIPRNSFVYNILIDGW--ARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 527 RSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLF 586
A+ I M G P TYT LIK + +AL+ E + GI+ D ++
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 587 NTFL 590
+ L
Sbjct: 838 HCLL 841
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/503 (19%), Positives = 193/503 (38%), Gaps = 112/503 (22%)
Query: 248 QLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRD 307
++ K R F ++ + + A++ +M+ G+ P+S Y +I A + + +
Sbjct: 303 KISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDE 362
Query: 308 GLGVLKIMQQENLKPLNSTLATLSVIC---SKALQLDLAESFLD---RISECLSPHPYNA 361
L ++ M++E ++ +L T SVI SKA + A+ + D RI + L+ Y
Sbjct: 363 ALSCVRKMKEEGIE---MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 362 LL----ASCNV--------------LNQP-----------------ERAVQVFAKMKQIK 386
++ +CN+ ++ P ++ + VF ++K+
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 387 LLPDIRTYELLFSLF---GFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMK 443
P + TY L +L+ G ++ E S ++ + V + M NG + +K
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTY--SMMINGF----VKLK 533
Query: 444 NLLNALG------EERMIRELIEYFYVAEKLFVYGNPSLA---------------TDIYN 482
+ NA +E M ++I Y + GN A T +
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 483 VVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQ 542
++H ++ + ++ +F M+ CG P T+N +++ R + A ++ M
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 543 GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC-------- 594
G S TYT +++ +A R + +G+ +D+ + L+ C
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 595 -------------------------YKRRIDIIEL--IVEYMHQEKVRPNPVTCGYVFSA 627
+ RR D+ E +++ M +E V+P+ T SA
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 628 YVNSGFHNTA---IEALQVLSLR 647
+G N A IE ++ L ++
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVK 796
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 148/357 (41%), Gaps = 55/357 (15%)
Query: 274 KKLIV--QMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLS 331
K L+V ++K G P+ TY +I + L V ++M++E +K L T S
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK---HNLKTYS 523
Query: 332 VICSKALQL-DLAESFL---DRISECLSPHP--YNALLASCNVLNQPERAVQVFAKMKQI 385
++ + ++L D A +F D + E + P YN ++++ + +RA+Q +M+++
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 386 KLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNL 445
+ P RT+ + + G+ S + L + +R + NG L
Sbjct: 584 RHRPTTRTFMPI--IHGYAKSG-DMRRSLEVFDMMRRCGCVPTVHTFNG----------L 630
Query: 446 LNALGEERMIRELIE-----------------------YFYVAE--KLFVY----GNPSL 476
+N L E+R + + +E Y V + K F Y N L
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 477 ATDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASL 534
DI Y +L ++ + Q A+ + K M +S YNI++D + A+
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 535 LISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLR 591
LI M ++G P TYT+ I + N A +E G++ ++ + T ++
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 30/330 (9%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
Y +L+ + V + A+ KMK+ + + TY ++ F +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE-- 404
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT 478
AKRI+ + ++H N+ A E ++RE+ E A + +Y
Sbjct: 405 -AKRIHKTLNASIYGKIIYAHCQTCNMERA---EALVREMEEEGIDA-PIAIY---HTMM 456
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
D Y +V + +KG + +FKR+K CG+ P TY +++ + + A + +
Sbjct: 457 DGYTMV----ADEKKGLV---VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
M +G TY+ +I ++ + + A + E +G++ DV+L+N + C
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL-------SLRMMSE 651
+D V+ M + + RP T + Y SG ++E ++ ++ +
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 652 DGNILREKRRF------VDEFILAEDSAAE 675
N L EKR+ +DE LA SA E
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANE 659
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
YN + ++ L Q +F KMK+ PDI TY +L + FG V E N+ +L
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL- 503
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIREL-IEYFYVAEKLFVYGNPSLA 477
ER + +S +L+N LG+ + E + + + EK NP +
Sbjct: 504 --------ERSDCKPDI----ISYNSLINCLGKNGDVDEAHVRFKEMQEKGL---NPDVV 548
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T Y+ ++ + ++ ++A ++F+ M + G P+ TYNI++DC A L S
Sbjct: 549 T--YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYS 606
Query: 538 MMIRQGFSPVTCTYTALIKI 557
M +QG +P + TYT L ++
Sbjct: 607 KMKQQGLTPDSITYTVLERL 626
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 144/351 (41%), Gaps = 23/351 (6%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
A L +M G+ + Y+ ++Q + + V M + +P T + L
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 333 ICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIR 392
+ QL + ++ ++ Y+ L+ + + L A ++F M + +
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 393 TY-ELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE 451
+Y +L SL G E MLS++H GV + + +ALG+
Sbjct: 409 SYMSMLESLCG-AGKTIEAIEMLSKIH-------------EKGVVTDTMMYNTVFSALGK 454
Query: 452 ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
+ I + + F EK+ G PS YN+++ + AINIF+ ++ P
Sbjct: 455 LKQISHIHDLF---EKMKKDG-PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 512 DSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
D +YN +++C A + M +G +P TY+ L++ + E+ A +L
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 572 ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY--MHQEKVRPNPVT 620
E + G Q +++ +N L C ++ E + Y M Q+ + P+ +T
Sbjct: 571 EEMLVKGCQPNIVTYNILL--DCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 40/345 (11%)
Query: 334 CSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDI 391
C +A+ L F + I+E L+ + YN L+ ++A+QVF++M + P+
Sbjct: 286 CDEAVGL-----FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNE 340
Query: 392 RTYELLFSLF----------GFV--NSPYEHSNMLSQL--------HV--AKRINAIERD 429
TY LL +L G V + Y + S L HV A R+
Sbjct: 341 YTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWS 400
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD--IYNVVLHH 487
G + S++SM L G+ IE + K+ G + TD +YN V
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKT------IEAIEMLSKIHEKG---VVTDTMMYNTVFSA 451
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
L + ++ ++F++MK G PD TYNI++ + A + + R P
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE 607
+Y +LI L ++ +EA + + G+ DV+ ++T + R+++ + E
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 608 YMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
M + +PN VT + +G A++ + + ++ D
Sbjct: 572 EMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 154/379 (40%), Gaps = 32/379 (8%)
Query: 260 VIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQEN 319
+I A + A+ L +++ G+KP + Y+ +++ +D ++ M++
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 320 LKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQPERA 375
+ P T + L A + + A L + E P ++ LLA + ++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEM-EAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 376 VQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGV 435
QV +MK I + PD + Y ++ FG N +H+ + +R M + G+
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-LDHA-----------MTTFDR-MLSEGI 475
Query: 436 QHSHLSMKNLLNA-LGEERMIRELIEYFYVAEKLF----VYGNPSLATDIYNVVLHHLVE 490
+ ++ L++ R I VAE++F G AT YN++++ +
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHI--------VAEEMFEAMERRGCLPCAT-TYNIMINSYGD 526
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
++ + +MK G P+ T+ +VD + A + M G P +
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y ALI Q +A+N DG++ +L N+ + RR +++YM
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 611 QEKVRPNPVTCGYVFSAYV 629
+ V+P+ VT + A +
Sbjct: 647 ENGVKPDVVTYTTLMKALI 665
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 129/337 (38%), Gaps = 42/337 (12%)
Query: 342 LAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF 401
L E+FL + L+P YNAL+ +C N E+A+ + AKM+Q D Y L+
Sbjct: 183 LYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSL 242
Query: 402 GFVNSPYEHSNMLSQLHVAKRINAIERD---------------MANNGVQHSHLSMKNLL 446
SN + + + + IERD A +G L + +
Sbjct: 243 -------TRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMA 295
Query: 447 NALGEERMIRELIEYFYV---------AEKLFVYGNPS---LATDIYNVVLHHLVEAQKG 494
A G L+ AE LF S T YN +L V+
Sbjct: 296 QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPL 355
Query: 495 QIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
+ A ++ M+ G PD TY++++D ++SA +++ M P + ++ L
Sbjct: 356 KDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRL 415
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFN----TFLRQACYKRRIDIIELIVEYMH 610
+ ++ + +L+ + G++ D +N TF + C +D + M
Sbjct: 416 LAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC----LDHAMTTFDRML 471
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
E + P+ VT + + G H A E + + R
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 160/403 (39%), Gaps = 44/403 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I CA+ + A LI +M+ G + Y +IQ+ + +SN D + +L++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLT-RSNKIDSVMLLRLY 257
Query: 316 QQENLKPLNSTLATLSVIC---------SKALQL-DLAESFLDRISECLSPHPYNALLAS 365
++ L + ++ I SKALQL +A++ +AL S
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 366 CNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA 425
L A +F +++Q + P R Y L L G+V + K +
Sbjct: 318 GRTLE----AEALFEELRQSGIKPRTRAYNAL--LKGYVKT-----------GPLKDAES 360
Query: 426 IERDMANNGV---QHSH-LSMKNLLNALGEE--RMIRELIEYFYVAEKLFVYGNPSLATD 479
+ +M GV +H++ L + +NA E R++ + +E V FV+
Sbjct: 361 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR------ 414
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
+L + + Q + K MK G PD + YN+++D A M
Sbjct: 415 ----LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
+ +G P T+ LI + + A + E G +N + + R
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 530
Query: 600 DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
D ++ ++ M + + PN VT + Y SG N AIE L+
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 136/318 (42%), Gaps = 34/318 (10%)
Query: 360 NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPY-EHSNMLSQLH 418
NAL+ S L E + V+ KMK+ + P + TY L + G V++ + + + + ++
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN--GLVSAMFVDSAERVFEVM 248
Query: 419 VAKRIN---------------------AIE--RDMANNGVQHSHLSMKNLLNALGEERMI 455
+ RI A+E RDM G + ++ ++ A +
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 308
Query: 456 RELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSET 515
+ + ++ + P +++V+ L + K +F+ M G P+
Sbjct: 309 GSCVALYQEMDEKGIQVPPH----AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 516 YNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTR 575
Y +++D + S + A L+ MI +GF P TY+ ++ L ++ + EAL+ R
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 576 LDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHN 635
DG+ ++ + +++ + R+D E + E M ++ + Y ++A +++ +
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD----SYCYNALIDAFTKH 480
Query: 636 TAIEALQVLSLRMMSEDG 653
++ L RM E+G
Sbjct: 481 RKVDEAIALFKRMEEEEG 498
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 144/363 (39%), Gaps = 32/363 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I G K A + + M+ G + TY +IQA S+F + + + M
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 316 QQENLK-PLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVLNQP 372
++ ++ P ++ + +C + + F + I + P+ Y L+
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV-NSPYEHSNMLSQLHVAKRINAIERDMA 431
E A+++ +M PD+ TY ++ + G N E + L H +
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVN--GLCKNGRVEEA--LDYFHTCR---------- 424
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD---IYNVVLHHL 488
+G+ + + +L++ LG+ + E AE+LF + T YN ++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDE-------AERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 489 VEAQKGQIAINIFKRMKLC-GYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
+ +K AI +FKRM+ G TY I++ + A L MMI +G +P
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVL---LFNTFLRQACYKRRIDIIEL 604
+ AL L K A +L+ G+ LD + NT + K + +
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADG 597
Query: 605 IVE 607
I E
Sbjct: 598 ITE 600
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
GV+ ++M +L++AL +E I E F KLF P T +N+++H +A+K
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFL---KLFDTIKPDART--FNILIHGFCKARK 288
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
A + MK+ + PD TY V+ ++ + ++ M G +P TYT
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
++ L + ++ EAL + E+ + DG D +++ + R I E M +
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 614 VRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
VR + + V++ +++ H++ E L RM E+G
Sbjct: 409 VRRDVL----VYNTMISAALHHSRDEMALRLLKRMEDEEG 444
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 60/308 (19%)
Query: 264 CAKEKNYM-LAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKP 322
CA EK+Y+ A+ L+ +M LGV+P Y +I A +N R +I+ + + P
Sbjct: 575 CA-EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP 633
Query: 323 LNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKM 382
DL Y ++ + LN+P++A +F M
Sbjct: 634 ------------------DL--------------FTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 383 KQIKLLPDIRTYELLFS------------LFGFVNSPYEHSNMLSQ---LHVAKRINAIE 427
K+ + PD+ TY +L + F + ++ M+++ L+ K++ A+
Sbjct: 662 KRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALF 721
Query: 428 RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHH 487
+DM + ++ LL E + RE+ + F V +F Y ++ D + +
Sbjct: 722 KDMKRREIVPDVVTYTVLLKNKPERNLSREM-KAFDVKPDVFYY---TVLID-WQCKIGD 776
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
L EA++ IF +M G PD+ Y ++ CC + K A ++ MI G P
Sbjct: 777 LGEAKR------IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Query: 548 TCTYTALI 555
YTALI
Sbjct: 831 VVPYTALI 838
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 133/329 (40%), Gaps = 39/329 (11%)
Query: 322 PLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQPERAVQ 377
P + + +C++ + A+ LDR+ + L P Y L+ + +N +A +
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWK-LGVEPEKSMYGKLIGAWCRVNNVRKARE 621
Query: 378 VFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQH 437
F + K++PD+ TY ++ + + +N P K+ A+ DM V+
Sbjct: 622 FFEILVTKKIVPDLFTYTIMINTYCRLNEP-------------KQAYALFEDMKRRDVKP 668
Query: 438 SHLSMKNLLNALGEERMIREL--------IEYFYVAEKLFVYGNP-----SLATD----- 479
++ LLN+ E M RE+ + Y+ + + + N +L D
Sbjct: 669 DVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRRE 728
Query: 480 -IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
+ +VV + ++ K + N+ + MK PD Y +++D + A +
Sbjct: 729 IVPDVVTYTVLLKNKPER--NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQ 786
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
MI G P YTALI + EA + +R G++ DV+ + + C
Sbjct: 787 MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGF 846
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSA 627
+ +V+ M ++ ++P + V A
Sbjct: 847 VLKAVKLVKEMLEKGIKPTKASLSAVHYA 875
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 151/355 (42%), Gaps = 29/355 (8%)
Query: 292 YDGIIQAASFQSNFRDGLGVLKIM-QQENLKPLNSTLATLSVICSKALQLDLA-ESFLDR 349
+D +IQ DG+ V K+M + +L P TL+ L K LA E F D
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 350 ISECLSP--HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSP 407
+S + P + Y ++ S L RA ++ A M+ +I Y +L
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID-------- 270
Query: 408 YEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
+ + V + + I++D+A ++ ++ L+ L + + +E + E
Sbjct: 271 ----GLCKKQKVWEAV-GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM--MDEM 323
Query: 468 LFVYGNPSLATDIYNVVLHHLVEA--QKGQI--AINIFKRMKLCGYHPDSETYNIMVDCC 523
L + +PS A + LVE ++G+I A+N+ KR+ G P+ YN ++D
Sbjct: 324 LCLRFSPSEAA------VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
R + A LL M + G P TY+ LI + + K + AL+ L G++L V
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAI 638
+N+ + C I E + M +K+ P VT + Y + G N A+
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 375 AVQVFAKM-KQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM-AN 432
V VF M ++ LLP++RT L L G V + H + +L I D+
Sbjct: 175 GVLVFKMMITKVSLLPEVRTLSAL--LHGLVK--FRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI----YNVVLHHL 488
GV S +K+L A +E+I + + D+ YNV++ L
Sbjct: 231 TGVIRSLCELKDLSRA-------KEMIAHM-----------EATGCDVNIVPYNVLIDGL 272
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ QK A+ I K + PD TY +V ++ ++ ++ M+ FSP
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
++L++ L + K EALNL++R G+ ++ ++N + C R+ EL+ +
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
M + +RPN VT + + G +TA+ L
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 160/423 (37%), Gaps = 56/423 (13%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ + ++ G K A L+ ++ GV P+ Y+ +I + F + + M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC---LSPHPYNALLASCNVLNQP 372
+ L+P + T + L + + +LD A SFL + + LS +PYN+L+
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNM 413
A A+M KL P + TY L + G S Y + +
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 414 LSQLHVAKRI-NAIE--RDMANNGVQHSHLSMKNLLNALGEE-------RMIRELIEYFY 463
LS L A I +A++ +MA V+ + ++ ++ EE ++E+ E
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 464 VAE--------------------KLFV----YGNPSLATDIYNVVLHHLVEAQKGQIAIN 499
V + K+FV GN L Y +LH K + A++
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 500 IFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILL 559
+ + M G D Y +++D + K L+ M +G P YT++I
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 560 QDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPV 619
+ F EA + + +G + + + + C ++ E++ M PN V
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 620 TCG 622
T G
Sbjct: 754 TYG 756
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/410 (19%), Positives = 152/410 (37%), Gaps = 57/410 (13%)
Query: 250 MKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGL 309
+K+ + +N +I+G K + A+ + +M ++P+ TY ++ + L
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 310 GVLKIMQQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASC 366
+ M + + P T TL S + L D + F + + P+ YN ++
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 367 NVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAI 426
+A + +M + ++PD +Y L E + LH + N
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH---KGNCE 609
Query: 427 ERDMANNGVQHSHLSMKNLLNALGE-ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVL 485
++ G+ H L AL + M++ ++ V Y V++
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC---------------YGVLI 654
Query: 486 HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFS 545
++ + ++ + K M G PD Y M+D S +K A + +MI +G
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 546 PVTCTYTALIKILLQDEKFNEA----------------------LNLLERTRLD------ 577
P TYTA+I L + NEA L++L + +D
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 578 -------GIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
G+ + +N +R C + RI+ ++ M + V P+ +T
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 126/617 (20%), Positives = 232/617 (37%), Gaps = 105/617 (17%)
Query: 14 SLMMEALCKGGYLDEAFNLM----DFLGVSQHXXXXXXXXXXXXXSCVESKSIIQASKCL 69
S ++E L K G ++EA NL+ DF GVS + S + + +A
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDF-GVSPNLFVYNALID----SLCKGRKFHEAELLF 390
Query: 70 ELMEKQMVGKNEATYSELLKLAVLQRSLPTALLIWQEYNKHHSK-SIIALHKFIWTFIRL 128
+ M K + N+ TYS L+ + + L TAL E K S+ + I +
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 129 GDLKSAYEALQQMVSLPMTGNIAGTVYGKFYSTILDIPVPSNKKLGPTMLDFMGDKQLDS 188
GD+ +A + +M+ NKKL PT++ +
Sbjct: 451 GDISAAEGFMAEMI---------------------------NKKLEPTVVTY-------- 475
Query: 189 CIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQ 248
S+ G K + L L H+ G
Sbjct: 476 --------------TSLMGGYCSKGKINKALRLYHEMTGKG------------------- 502
Query: 249 LMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDG 308
+ ++F ++ G + A KL +M VKP+ TY+ +I+ + +
Sbjct: 503 -IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 309 LGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRI--SEC-LSPHPYNALLAS 365
LK M ++ + P + L Q A+ F+D + C L+ Y LL
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 366 CNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA 425
+ E A+ V +M Q + D+ Y +L ++ +H + K
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVL------IDGSLKHKD-------RKLFFG 668
Query: 426 IERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN-PSLATDIYNVV 484
+ ++M + G++ + ++++A + + E F + + + G P+ T Y V
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDA---KSKTGDFKEAFGIWDLMINEGCVPNEVT--YTAV 723
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
++ L +A A + +M+ P+ TY +D + ++ + I +G
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
T TY LI+ + + EA L+ R DG+ D + + T + + C RR D+ +
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC--RRNDVKKA 841
Query: 605 IVEY--MHQEKVRPNPV 619
I + M ++ +RP+ V
Sbjct: 842 IELWNSMTEKGIRPDRV 858
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 140/344 (40%), Gaps = 20/344 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ +++G + + A L+ M G P+ Y+ +I + + L V M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 316 QQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPHP--YNALLASCNVLNQP 372
+++ ++ T TL S + + D A D + + P+ + AL+ +
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++ +M + ++P++ TY L + F ++ + + L V+K
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFC-IHGCLGDAKYMFDLMVSK----------- 318
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
G ++ L+ + + + + ++ F + G+ YN ++H +A
Sbjct: 319 -GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF----TYNTLIHGYCQAG 373
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
K +A +F RM CG PD TYNI++DC + A +++ + + TY
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYK 596
+I+ L + +K EA L G++ D + + T + C K
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 172/429 (40%), Gaps = 57/429 (13%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTY----DGIIQAASFQS-----NF 305
+SF +IH + LA L+ +M LG +PS T +G Q FQ +
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 306 RDGLGVLKIMQQENL--------KPLNSTLATLSVICSKALQLDLAESFLDRISECLSPH 357
DG G + + N + LN+ L + K ++ D
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV-------------- 220
Query: 358 PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
YN L++ + + A ++ M + K+ P++ + L F + N+L
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF------VKEGNLLEAR 274
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNA-LGEERMIRELIEYFYVAEKLFVYGNPSL 476
++ K + I R + N ++ L ++ LG+ + + +L+ V++ F P +
Sbjct: 275 NLYKEM--IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM----VSKGCF----PDV 324
Query: 477 ATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLI 536
T YN ++ ++++ + + +F M G D+ TYN ++ A +
Sbjct: 325 VT--YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 537 SMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYK 596
+ M+ G SP TY L+ L + K +AL ++E + + +D++ +N ++ C
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 597 RRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNIL 656
++ + + ++ V+P+ + + S G A + R M EDG +
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL-----CRRMKEDGFMP 497
Query: 657 REKRRFVDE 665
E R DE
Sbjct: 498 SE--RIYDE 504
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
PS+ + VL + + K I I ++ +M+ G D ++ I++ C A
Sbjct: 77 PSIVD--FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
L+ M++ GF P T +L+ Q +F EA++L++ G +V+++NT +
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
C R ++ + M ++ +R + VT + S NSG A L+ + R + D
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI--DP 252
Query: 654 NIL 656
N++
Sbjct: 253 NVI 255
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 142/372 (38%), Gaps = 60/372 (16%)
Query: 279 QMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKAL 338
+M GV S +Y +I A + L +L M+ E + P T T+ C++
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG- 224
Query: 339 QLD---LAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRT 393
LD L F + E + P YN LL++C + + A VF M ++PD+ T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 394 YELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEER 453
Y L FG +L +++ + +MA+ G S+ ++ +
Sbjct: 285 YSHLVETFG-------------KLRRLEKVCDLLGEMASGG------SLPDITS------ 319
Query: 454 MIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDS 513
YNV+L ++ + A+ +F +M+ G P++
Sbjct: 320 ---------------------------YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 514 ETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
TY+++++ Y L M P TY LI++ + F E + L
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRI-DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+ I+ D+ + + AC K + + I++YM + P+ V A+ +
Sbjct: 413 MVEENIEPDMETYEGIIF-ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 633 FHNTAIEALQVL 644
+ A+ A +
Sbjct: 472 LYEEALVAFNTM 483
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 150/390 (38%), Gaps = 21/390 (5%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGL-GVLK 313
+S+ +I+ + Y + +L+ +MK + PS TY+ +I A + +GL G+
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 314 IMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLN 370
M+ E ++P T TL C+ D AE +++ + P Y+ L+ + L
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ E+ + +M LPDI +Y +L + S E + Q+ A
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA---------- 346
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
G + + LLN G+ ++ + F E +P AT YN+++ E
Sbjct: 347 ---GCTPNANTYSVLLNLFGQSGRYDDVRQLFL--EMKSSNTDPDAAT--YNILIEVFGE 399
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
+ + +F M PD ETY ++ C ++ A ++ M P +
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
YT +I+ Q + EAL G + F++ L + E I+ +
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEA 640
+ N T AY G A++
Sbjct: 520 DSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 23/267 (8%)
Query: 373 ERAVQVFAKM-KQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+R++++F M +QI P+ Y ++ SL G + + + + +M
Sbjct: 122 QRSLRLFKYMQRQIWCKPNEHIYTIMISLLG-------------REGLLDKCLEVFDEMP 168
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYF--YVAEKLFVYGNPSLATDIYNVVLHHLV 489
+ GV S S L+NA G +E EK+ +PS+ T YN V++
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI----SPSILT--YNTVINACA 222
Query: 490 EAQ-KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ + +F M+ G PD TYN ++ C+I A ++ M G P
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TY+ L++ + + + +LL G D+ +N L I +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHN 635
M PN T + + + SG ++
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYD 369
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 72/338 (21%)
Query: 357 HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ 416
H YN L+ +C+ PE+A ++ ++M++ + PDI TY L S++ + +E ++ +
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 417 LH---VAKRI---NAIERDMANNG---------------VQHSHLSMKNL------LNAL 449
+ VA I N+ + G V +H++ L +N +
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 450 GEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGY 509
E +RE++E + F +P + T YN +L L E + + A + M
Sbjct: 324 DEALRLREVME-----SRGF---SPGVVT--YNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 510 HPDSETYNIMVDC-CSI---------------------LRSYKS-------------ASL 534
PD+ T N +++ C I + SYK+ A
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 535 LISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC 594
+ MI +GFSP TY+ L+ K +E LLE G+ DV L+ +R+ C
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 595 YKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
++D +++ E M ++ + + V + AY +G
Sbjct: 494 KLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTG 531
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 482 NVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIR 541
V+L+ LV+ + IFK+M G + YN++V CS + A L+S M
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 542 QGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI-D 600
+G P TY LI + + EAL++ +R G+ +++ +N+F+ + R+ +
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE 291
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLS--------------L 646
L E ++ V N VT + Y + A+ +V+ L
Sbjct: 292 ATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 647 RMMSEDGNILREKRRFVDE 665
R + EDG I RE R + E
Sbjct: 350 RKLCEDGRI-REANRLLTE 367
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 120/296 (40%), Gaps = 26/296 (8%)
Query: 335 SKALQLDLAESFL----DRISEC--LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLL 388
+A L++A +FL R + C L +N+L+ S + +V++F MKQ+ +
Sbjct: 111 GRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 389 PDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA 448
P + T+ L S+ +L + + + GV + L+N
Sbjct: 171 PSVLTFNSLLSI------------LLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLING 218
Query: 449 LGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM--KL 506
+ M+ E F E + NP + T YN ++ L A K +IA N+ M K
Sbjct: 219 FCKNSMVDEAFRIFKDME--LYHCNPDVVT--YNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 507 CGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNE 566
HP+ +Y +V + + A L+ M+ +G P TY LIK L + +++E
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE 334
Query: 567 ALNLL--ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
++L D FN ++ C +D + + M K+ P+ +
Sbjct: 335 IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/416 (18%), Positives = 163/416 (39%), Gaps = 46/416 (11%)
Query: 292 YDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRIS 351
++ +I++ F++ + + + M+Q + P T +L I K + +A D +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 352 ECLSPHP----YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFS-------- 399
P +N L+ + + A ++F M+ PD+ TY +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 400 ------LFGFVNSPYE-HSNMLSQLHVAK------RINA---IERDMANNGVQHSHLSMK 443
L G + + H N++S + + I+ + DM + G++ + ++
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 444 NLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKR 503
L+ L E E+ + F P T +N+++ +A A+ +F+
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACT--FNILIKAHCDAGHLDAAMKVFQE 378
Query: 504 MKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF-------SPVTCTYTALIK 556
M HPDS +Y++++ + + A L + + + P+ Y + +
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 557 ILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID-IIELIVEYMHQEKVR 615
L + K +A + + G+Q D + T + C + + EL+V + +E V
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV- 496
Query: 616 PNPVTCGYVFSAYVNSG----FHNTAIEALQVLSLRMMSEDGNILRE--KRRFVDE 665
P+ T + + G H+T L+ L + + ++L E KR+F +E
Sbjct: 497 PDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 187/480 (38%), Gaps = 77/480 (16%)
Query: 159 YSTILDIPVPSNKKLGPTMLDFMGDKQLDSCIHPSIMYLPDAISASIEKGQPGV------ 212
Y+ +LD + S + + + + + + L+S + P++ I G V
Sbjct: 172 YNAVLDATIRSKRNI--SFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 213 ---RKGVQPLGLAHQTISTGNKKVKIAKLDE---LSRRKHLQLMKVLRWSFNDVIHGCAK 266
KG P + + T+ G K+ K+D+ L R L+ ++ S+N VI+G +
Sbjct: 230 KMETKGCLPNVVTYNTLIDG--YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 267 EKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNST 326
E ++ +M G TY+ +I+ + NF L + M + L P
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP---- 343
Query: 327 LATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIK 386
SVI Y +L+ S RA++ +M+
Sbjct: 344 ----SVI------------------------TYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 387 LLPDIRTYELL---FSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMK 443
L P+ RTY L FS G++N Y + R+M +NG S ++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYR----------------VLREMNDNGFSPSVVTYN 419
Query: 444 NLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVVLHHLVEAQKGQIAINIF 501
L+N + + I V E + G L+ D+ Y+ VL + A+ +
Sbjct: 420 ALINGHCVTGKMEDAIA---VLEDMKEKG---LSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 502 KRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQD 561
+ M G PD+ TY+ ++ R K A L M+R G P TYTALI +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 562 EKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI-DIIELIVEYMHQEKVRPNPVT 620
+AL L G+ DV+ ++ + + R + L+++ ++E V P+ VT
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVT 592
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 148/370 (40%), Gaps = 52/370 (14%)
Query: 288 SSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKP-LNSTLATLSVICSKALQLDLAES- 345
+S +D ++++ S S L ++ + Q P + S A L + AE+
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 346 FLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGF 403
F + + +SP+ YN L+ + A+ +F KM+ LP++ TY L +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 404 VNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIREL----- 458
+ + +L R MA G++ + +S ++N L E ++E+
Sbjct: 253 LRKIDDGFKLL-------------RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 459 -----------IEYFYVAEKLFVYGN-----------------PSLATDIYNVVLHHLVE 490
+ Y + + GN PS+ T Y ++H + +
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT--YTSLIHSMCK 357
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
A A+ +M++ G P+ TY +VD S A ++ M GFSP T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y ALI K +A+ +LE + G+ DV+ ++T L C +D + M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 611 QEKVRPNPVT 620
++ ++P+ +T
Sbjct: 478 EKGIKPDTIT 487
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 155/378 (41%), Gaps = 44/378 (11%)
Query: 212 VRKGVQP-----LGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAK 266
+R G+ P L H GN + LD++ R + ++ ++ G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG----LCPNERTYTTLVDGFS- 391
Query: 267 EKNYM-LAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNS 325
+K YM A +++ +M G PS TY+ +I D + VL+ M+++ L P
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 326 TLAT-LSVICSKALQLDLAESFL---DRISECLSPHP--YNALLASCNVLNQPERAVQVF 379
+ +T LS C D+ E+ + + + + P Y++L+ + + A ++
Sbjct: 452 SYSTVLSGFCR---SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 380 AKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSH 439
+M ++ L PD TY L + + M L A +++ +M GV
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYC----------MEGDLEKALQLH---NEMVEKGVLPDV 555
Query: 440 LSMKNLLNALGEERMIRE----LIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKG- 494
++ L+N L ++ RE L++ FY +L + N+ +V KG
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 495 ------QIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
A +F+ M + PD YNIM+ + A L M++ GF T
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 549 CTYTALIKILLQDEKFNE 566
T AL+K L ++ K NE
Sbjct: 676 VTVIALVKALHKEGKVNE 693
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 130/296 (43%), Gaps = 20/296 (6%)
Query: 359 YNALL-ASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
YNA+L A+ A VF +M + ++ P++ TY +L F F N+ L
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFA------GNIDVAL 225
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSL 476
+ + M G + ++ L++ + +R++ + F + + + G P+L
Sbjct: 226 TLFDK-------METKGCLPNVVTYNTLIDGYCK---LRKIDDGFKLLRSMALKGLEPNL 275
Query: 477 ATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLI 536
+ YNVV++ L + + + M GY D TYN ++ ++ A ++
Sbjct: 276 IS--YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 537 SMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYK 596
+ M+R G +P TYT+LI + + N A+ L++ R+ G+ + + T + K
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 597 RRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
++ ++ M+ P+ VT + + + +G AI L+ + + +S D
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 134/319 (42%), Gaps = 43/319 (13%)
Query: 355 SPHPYNALLASCNVLN-----QPERAVQVFAKMKQIKLLPD----------IRTYELLFS 399
+PH + L C L+ + + Q+ A+ K L D TY+L +S
Sbjct: 73 NPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYS 132
Query: 400 ---LFGFVNSPYEHSNM----LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEE 452
+F V Y ++ LS +H+A+ + ++ N V + + K N E
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR--NISFAE 190
Query: 453 RMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPD 512
+ +E++E V+ +F Y N+++ A +A+ +F +M+ G P+
Sbjct: 191 NVFKEMLES-QVSPNVFTY----------NILIRGFCFAGNIDVALTLFDKMETKGCLPN 239
Query: 513 SETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE 572
TYN ++D LR L+ M +G P +Y +I L ++ + E +L
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 573 RTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVR----PNPVTCGYVFSAY 628
G LD + +NT ++ C + + + +V MH E +R P+ +T + +
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYC--KEGNFHQALV--MHAEMLRHGLTPSVITYTSLIHSM 355
Query: 629 VNSGFHNTAIEALQVLSLR 647
+G N A+E L + +R
Sbjct: 356 CKAGNMNRAMEFLDQMRVR 374
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 168/390 (43%), Gaps = 35/390 (8%)
Query: 334 CSKALQLDLAESFLDRISE-CLSPHP--YNALLASCNVLNQPERAVQVFAKMKQIKLLPD 390
C +A +++ + L ++E SP+ Y L+ C + E+A +F +M ++ L+ +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 391 IRTYELL-------------FSLF------GFVNSPYEHSNMLSQLHVAKRIN---AIER 428
RTY +L F ++ G + Y ++ +++QL R +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHH 487
+M GV + ++ L+ L E + E + V +++ G NP+L T YN ++
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANK---VVDQMKSDGINPNLIT--YNTLIDG 347
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
K A+++ + +K G P TYNI+V A+ ++ M +G P
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE 607
TYT LI + + +A+ L G+ DV ++ + C K +++ + +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 608 YMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEFI 667
M ++ PN V + Y G A++ L+ + + ++ + R++ E +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN----VASYRYMIEVL 523
Query: 668 LAEDSAAESDILVKLFEDSEDEFAVGLLNL 697
E + E++ LV+ DS + + +L+L
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSL 553
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 34/371 (9%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+ +I GC K+ AK L +M LG+ + TY +I + G + + MQ
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 317 QENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPE 373
++ + P L + ++ +C D + F + +S + YN L+ +
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
A +V +MK + P++ TY L F V + K + ++ RD+ +
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVG------------KLGKAL-SLCRDLKSR 367
Query: 434 GVQHSHLSMKNLLNAL-------GEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLH 486
G+ S ++ L++ G +M++E+ E PS T Y +++
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI---------KPSKVT--YTILID 416
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+ + AI + M+ G PD TY++++ I AS L M+ + P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
Y +I ++ AL LL+ + +V + + C +R+ E +V
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 607 EYMHQEKVRPN 617
E M + P+
Sbjct: 537 EKMIDSGIDPS 547
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/464 (18%), Positives = 170/464 (36%), Gaps = 83/464 (17%)
Query: 104 WQEYNKHHSKSIIALHKF---IWTFIRLGDLKSAYEALQQMVSLPMTGNIAGTVYGKFYS 160
W +N++ SK ++ ++ F I G+++ +++ L ++ + N+ Y+
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVV------IYT 202
Query: 161 TILDIPVPSNKKLGPTMLDF-MGDKQLDSCIHPSIMYLPDAISASIEKGQPGVRKGVQPL 219
T++D + L F MG L + + + ++K + + +Q
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 220 GL----------AHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKN 269
G+ +Q G K DE+ R + ++N +I G +E
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG----VSCNIVTYNTLIGGLCREMK 318
Query: 270 YMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLAT 329
A K++ QMK G+ P+ TY+ +I L + + ++ L P T
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 330 L-SVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIK 386
L S C K A+ + + P Y L+ + + E+A+Q+ M+++
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 387 LLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRI--NAIERDMANNGVQHSHLSMKN 444
L+PD+ TY +L + GF + Q++ A R+ + +E++ N V
Sbjct: 439 LVPDVHTYSVL--IHGFC--------IKGQMNEASRLFKSMVEKNCEPNEV--------- 479
Query: 445 LLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM 504
IYN ++ + A+ + K M
Sbjct: 480 -----------------------------------IYNTMILGYCKEGSSYRALKLLKEM 504
Query: 505 KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ P+ +Y M++ R K A L+ MI G P T
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 11/248 (4%)
Query: 402 GFVNSPYEHSNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMIREL 458
GF + + ++ M+ L AK+ AI + +M +G Q + ++ L+++ G + E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKG--QIAINIFKRMKLCGYHPDSETY 516
+ F ++ P T + +H A+ G IA+++++RM+ G PD+ TY
Sbjct: 419 MNVFNQMQEAGC--KPDRVTYCTLIDIH----AKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
+++++C +A L M+ QG +P TY ++ + + + AL L +
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNT 636
G + D + ++ + + ++ E + M Q+ P+ G + + +G
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 637 AIEALQVL 644
A + Q +
Sbjct: 593 AWQWYQAM 600
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 130/346 (37%), Gaps = 56/346 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ ++ + K + KL+ +M G +P++ TY+ +I + + + + V M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI-SECLSPH--PYNALLASCNVLNQP 372
Q+ KP T TL I +KA LD+A R+ + LSP Y+ ++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++F +M P++ TY ++ L
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDL-------------------------------- 513
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
H +N NAL ++ R++ + +K+ Y++V+ L
Sbjct: 514 ------HAKARNYQNAL---KLYRDMQNAGFEPDKV-----------TYSIVMEVLGHCG 553
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A +F M+ + PD Y ++VD + + A M+ G P T
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
+L+ L+ K EA LL+ G++ + + T L C R
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGR 658
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 11/248 (4%)
Query: 402 GFVNSPYEHSNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMIREL 458
GF + + ++ M+ L AK+ AI + +M +G Q + ++ L+++ G + E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKG--QIAINIFKRMKLCGYHPDSETY 516
+ F ++ P T + +H A+ G IA+++++RM+ G PD+ TY
Sbjct: 419 MNVFNQMQEAGC--KPDRVTYCTLIDIH----AKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
+++++C +A L M+ QG +P TY ++ + + + AL L +
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNT 636
G + D + ++ + + ++ E + M Q+ P+ G + + +G
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 637 AIEALQVL 644
A + Q +
Sbjct: 593 AWQWYQAM 600
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 130/346 (37%), Gaps = 56/346 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ ++ + K + KL+ +M G +P++ TY+ +I + + + + V M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI-SECLSPH--PYNALLASCNVLNQP 372
Q+ KP T TL I +KA LD+A R+ + LSP Y+ ++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++F +M P++ TY ++ L
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDL-------------------------------- 513
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
H +N NAL ++ R++ + +K+ Y++V+ L
Sbjct: 514 ------HAKARNYQNAL---KLYRDMQNAGFEPDKV-----------TYSIVMEVLGHCG 553
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A +F M+ + PD Y ++VD + + A M+ G P T
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
+L+ L+ K EA LL+ G++ + + T L C R
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGR 658
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 11/248 (4%)
Query: 402 GFVNSPYEHSNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMIREL 458
GF + + ++ M+ L AK+ AI + +M +G Q + ++ L+++ G + E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKG--QIAINIFKRMKLCGYHPDSETY 516
+ F ++ P T + +H A+ G IA+++++RM+ G PD+ TY
Sbjct: 419 MNVFNQMQEAGC--KPDRVTYCTLIDIH----AKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
+++++C +A L M+ QG +P TY ++ + + + AL L +
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNT 636
G + D + ++ + + ++ E + M Q+ P+ G + + +G
Sbjct: 533 AGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 637 AIEALQVL 644
A + Q +
Sbjct: 593 AWQWYQAM 600
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 130/346 (37%), Gaps = 56/346 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ ++ + K + KL+ +M G +P++ TY+ +I + + + + V M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI-SECLSPH--PYNALLASCNVLNQP 372
Q+ KP T TL I +KA LD+A R+ + LSP Y+ ++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++F +M P++ TY ++ L
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDL-------------------------------- 513
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
H +N NAL ++ R++ + +K+ Y++V+ L
Sbjct: 514 ------HAKARNYQNAL---KLYRDMQNAGFEPDKV-----------TYSIVMEVLGHCG 553
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A +F M+ + PD Y ++VD + + A M+ G P T
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
+L+ L+ K EA LL+ G++ + + T L C R
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDGR 658
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 151/383 (39%), Gaps = 29/383 (7%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
W+FN + +E A + M G +P +Y +I D + +
Sbjct: 115 WAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNA 174
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLA-ESFLDRISEC---LSPHPYNALLASCNVLN 370
M + + P N A L V A ++DLA E + I LS YNAL++
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ E+A + + M +I PD+ TY +L + Y +NML KR + +M
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNY-------YYDNNML------KRAEGVMAEM 281
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVVLHHL 488
+G+Q S LL R+ Y ++ +++ P D+ Y+ ++
Sbjct: 282 VRSGIQLDAYSYNQLLKR--HCRVSHPDKCYNFMVKEM----EPRGFCDVVSYSTLIETF 335
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKS--ASLLISMMIRQGFSP 546
A + A +F+ M+ G + TY ++ + LR S A L+ M G SP
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK--AFLREGNSSVAKKLLDQMTELGLSP 393
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
YT ++ L + ++A + I D + +N+ + C R+ +
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 607 EYMHQEKVRPNPVTCGYVFSAYV 629
E M ++ P+ +T ++ +
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLI 476
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 133/324 (41%), Gaps = 27/324 (8%)
Query: 266 KEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNS 325
K K+ ++KL +M G+KP + T+ II A + + + M +P N
Sbjct: 187 KSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNV 246
Query: 326 TLATLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQPERAVQVFAKM 382
T+A + +A +D+A S DR + ++ L+ V + + ++ +M
Sbjct: 247 TMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 383 KQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSM 442
K + + P++ Y L G P++ I +D+ NG + +
Sbjct: 307 KALGVKPNLVIYNRLIDSMGRAKRPWQ-------------AKIIYKDLITNGFTPNWSTY 353
Query: 443 KNLLNALGEERMIRELIE-YFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIF 501
L+ A G R + + Y + EK SL +YN +L + + A IF
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGL-----SLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 502 KRMKLCGY-HPDSETYN--IMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKIL 558
+ MK C PDS T++ I V CS S A+LL M GF P T++I+
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL--QMREAGFEPTLFVLTSVIQCY 466
Query: 559 LQDEKFNEALNLLERTRLDGIQLD 582
+ ++ ++ + ++ GI D
Sbjct: 467 GKAKQVDDVVRTFDQVLELGITPD 490
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 34/278 (12%)
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E++ ++F +M + + PD T+ + S Q V KR M++
Sbjct: 192 EKSEKLFDEMLERGIKPDNATFTTIISC-------------ARQNGVPKRAVEWFEKMSS 238
Query: 433 NGVQHSHLSMKNLLNALGEERMI--------RELIEYFYVAEKLFVYGNPSLATDIYNVV 484
G + +++M +++A G + R E + + F S IY V
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF-----STLIRIYGVS 293
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
++ +NI++ MK G P+ YN ++D + A ++ +I GF
Sbjct: 294 GNY-------DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID-IIE 603
+P TY AL++ + ++AL + + G+ L V+L+NT L R +D E
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
Query: 604 LIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
+ + + E P+ T + + Y SG + A AL
Sbjct: 407 IFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAAL 444
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 153/381 (40%), Gaps = 33/381 (8%)
Query: 246 HLQLMKVLR--WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQS 303
HLQ+M V ++ N +++ + LA + +M LG +P T+ +I +
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 304 NFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----Y 359
+ + ++ M + +KP T+ K ++ A S D++ E P Y
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMY 215
Query: 360 NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF---GFVNSPYEHSNMLSQ 416
+L+ + A + M + K+ PD+ T+ L F G E N + +
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 417 LHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSL 476
+ +A I + +L+N E + E + FY+ E + P +
Sbjct: 276 MSIAPNI----------------FTYTSLINGFCMEGCVDEARQMFYLMETKGCF--PDV 317
Query: 477 ATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLI 536
Y +++ + +K A+ IF M G ++ TY ++ + A +
Sbjct: 318 VA--YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 537 SMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE---RTRLDGIQLDVLLFNTFLRQA 593
S M+ +G P TY L+ L + K +AL + E + +DG+ ++ +N L
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 594 CYKRRIDIIELIVEYMHQEKV 614
CY +++ ++ E M + ++
Sbjct: 436 CYNGKLEKALMVFEDMRKREM 456
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 139/360 (38%), Gaps = 30/360 (8%)
Query: 290 CTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDR 349
C Y I++ F + L + M + P L + +K + D+ + D
Sbjct: 38 CNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH 97
Query: 350 ISECLSPHPYNALLASCNVL-------NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFG 402
+ H L +CN+L +QP A KM ++ PDI T+ L + F
Sbjct: 98 LQIMGVSHD----LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 403 FVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYF 462
N E +M++Q M G++ + ++++L + + + F
Sbjct: 154 LGNRMEEAMSMVNQ-------------MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 463 YVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD 521
E YG P + +Y +++ L + + + A ++ + M PD T+N ++D
Sbjct: 201 DQMEN---YGIRPDVV--MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 522 CCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQL 581
+ A L + MIR +P TYT+LI + +EA + G
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 582 DVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
DV+ + + + C +++D I M Q+ + N +T + + G N A E
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMM 539
+ +L+ + + +K + IN+ +++ G D T N++++C C + Y ++S L MM
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
+ GF P T+T+LI + EA++++ + GI+ DV+++ T + C +
Sbjct: 135 -KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 600 DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ + + M +RP+ V + + NSG A L+ ++ R + D
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 28/349 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
+ +I K + A L QM+ G++P Y ++ +RD +L+ M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 317 QENLKPLNSTL-ATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPE 373
+ +KP T A + + LD E + + I ++P+ Y +L+ + +
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLF-------------------GFVNSPYEHSNML 414
A Q+F M+ PD+ Y L + F G + ++ ++
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 415 SQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVY 471
+ N + M + GV + + LL+ L +++ + F +K +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 472 G-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYK 530
G P++ T YNV+LH L K + A+ +F+ M+ TY I++ K
Sbjct: 420 GVAPNIWT--YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 531 SASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGI 579
+A L + +G P TYT +I L ++ +EA L + + DG+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 18/273 (6%)
Query: 376 VQVFAKMKQIKLLPDI----RTYELL-FSLFGFVNSPYEHSNMLSQLHVAKRINAIER-D 429
++ AK++Q KL+ D+ R ++L F V Y + + + A N +E+ D
Sbjct: 141 IESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYA--FNVMEKYD 198
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
+ N V + LL+AL + + +R+ E F F P T Y+++L
Sbjct: 199 LPPNLV-----AFNGLLSALCKSKNVRKAQEVFENMRDRF---TPDSKT--YSILLEGWG 248
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ A +F+ M G HPD TY+IMVD A ++ M P T
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
Y+ L+ + + EA++ G++ DV +FN+ + C R+ + +++ M
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 610 HQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+ V PN +C + + G + A + +
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 401
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 59/359 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+FN ++ K KN A+++ M+ P S TY +++ + N V + M
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECL---SPHPYNALLASCNVLNQP 372
P T + + I KA ++D A + + + + Y+ L+ + N+
Sbjct: 264 IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E AV F +M++ + D+ + L F N K + + ++M +
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR-------------MKNVYRVLKEMKS 370
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
GV + S N++L HL+E
Sbjct: 371 KGVTPNSKSC---------------------------------------NIILRHLIERG 391
Query: 493 KGQIAINIFKRM-KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+ A ++F++M K+C PD++TY +++ + ++A + M ++G P T+
Sbjct: 392 EKDEAFDVFRKMIKVC--EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
+ LI L ++ +A LLE GI+ + F + + R D+++ + E M+
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMN 508
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 161/376 (42%), Gaps = 35/376 (9%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQM---KILGVKPSSCTYDGIIQAASFQSNFRDGLGVL 312
+++ +I AK + Y L LI M K+L V+ T+ +++ + + +
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVE----TFCIVMRKYARAQKVDEAIYAF 191
Query: 313 KIMQQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSP--HPYNALLASCNVL 369
+M++ +L P L + LS +C K+ + A+ + + + +P Y+ LL
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALC-KSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKE 250
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRIN---AI 426
+A +VF +M PDI TY + M+ L A R++ I
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSI----------------MVDILCKAGRVDEALGI 294
Query: 427 ERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLH 486
R M + + + L++ G E + E ++ F E+ + + + ++N ++
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA----VFNSLIG 350
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+A + + + K MK G P+S++ NI++ I R K + + + + P
Sbjct: 351 AFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL-IERGEKDEAFDVFRKMIKVCEP 409
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
TYT +IK+ + ++ A + + R G+ + F+ + C +R +++
Sbjct: 410 DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLL 469
Query: 607 EYMHQEKVRPNPVTCG 622
E M + +RP+ VT G
Sbjct: 470 EEMIEMGIRPSGVTFG 485
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 152/391 (38%), Gaps = 54/391 (13%)
Query: 287 PSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESF 346
P + Y +I S F + + L M+ + P T +TL C QL +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 347 LDRI--SECL-SPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLF-SLFG 402
L+ + C SP +N+L+ + A ++ KM + +P Y +L S+ G
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 403 FVNS---------PYEHSNMLSQLHVAKRIN--AIERDMANNGVQHSHLSMKNLLNALGE 451
+S +S ML+ V +IN + R + + G S+
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV--------- 470
Query: 452 ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
IRE+I ++ + T Y+ VL++L A K ++A +F+ MK G
Sbjct: 471 ---IREMIGQGFIPD-----------TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 512 DSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
D TY IMVD + A + M G +P TYTALI L+ +K + A L
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 572 ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK----------------VR 615
E +G +++ ++ + C +++ I E M K R
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 616 PNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
PN VT G + + S A + L +S+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/535 (19%), Positives = 227/535 (42%), Gaps = 64/535 (11%)
Query: 74 KQMVGK----NEATYSELLKLAVLQRSLPTALLIWQEYNKHHSKSIIALHKF-IWTFIRL 128
++M+G+ + +TYS++L + A L+++E + + + + + +F +
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 129 GDLKSAYEALQQMVSLPMTGNIAGTVYGKFYSTILDIPVPSNKKLGPTMLDFMGDKQLDS 188
G ++ A + +M + T N+ T ++ + V +L TML +
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVV-TYTALIHAYLKAKKVSYANELFETMLS-------EG 583
Query: 189 CIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQ 248
C+ P+I+ I + GQ V K Q + + + + D+ S R ++
Sbjct: 584 CL-PNIVTYSALIDGHCKAGQ--VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV- 639
Query: 249 LMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDG 308
++ ++ G K A+KL+ M + G +P+ YD +I +
Sbjct: 640 ------VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 309 LGVLKIMQQENLKPLNSTLATLSVICSKALQL---DLAESFLDRISE-CLSPHP--YNAL 362
V M + +TL T S + + ++ DLA L ++ E +P+ Y +
Sbjct: 694 QEVKTEMSEHGFP---ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 363 LASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL----- 417
+ + + + A ++ M++ P++ TY + FG + +L ++
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 418 ---HVAKRINAIERDMANNGVQHSHLSMKNL------LNALGEERMI----RELIEYFYV 464
+V R+ I+ N + +H ++ + + G ++I +E IE +
Sbjct: 811 APNYVTYRV-LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 465 AEKLFVYGNPSLAT--DIYNVVLHHLVEAQKGQIAINIFKRM-----KLCGYHPDSETYN 517
+++ G A +Y +++ +L++AQ+ ++A+ + + + L Y S TYN
Sbjct: 870 LDEI---GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY---SSTYN 923
Query: 518 IMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE 572
+++ + ++A L S M ++G P ++ +LIK L ++ K +EAL LL+
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 156/407 (38%), Gaps = 56/407 (13%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
A+K +M+ +G P+ TY +I A ++ + + N T+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHA---------------YLKAKKVSYANELFETM-- 579
Query: 333 ICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIR 392
L+E L I Y+AL+ Q E+A Q+F +M K +PD+
Sbjct: 580 ---------LSEGCLPNIV------TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 393 TYELLFSLFGFVNSPYEHSNMLS---------QLHVAKRINAIERDMANNGVQHSHLSMK 443
Y F + E N+++ + H + + M+ G + + +
Sbjct: 625 MY------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 444 NLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKR 503
L++ L + + +L E V ++ +G P+ Y+ ++ + ++ +A + +
Sbjct: 679 ALIDGLCK---VGKLDEAQEVKTEMSEHGFPATLY-TYSSLIDRYFKVKRQDLASKVLSK 734
Query: 504 MKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
M P+ Y M+D + A L+ MM +G P TYTA+I K
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGY 623
L LLER G+ + + + + C +D+ ++E M Q + T GY
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH--TAGY 852
Query: 624 VFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEFILAE 670
V GF+ IE+L +L + L R +D I A+
Sbjct: 853 ---RKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
PS +T YN ++ ++A + A I + M L D T + ++ A
Sbjct: 233 PSRST--YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
L+ + F P T YT LI L + F EA++ L R R +V+ ++T L
Sbjct: 291 TLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
K+++ + ++ M E P+P + AY SG H+ A + L+
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 177/455 (38%), Gaps = 79/455 (17%)
Query: 187 DSC--IHPSIMY---LPDAISASIEKGQPGVRKGVQPLGLAHQTISTG-NKKVKIAKLDE 240
D C IH SIM L + A++ + + GV P + H + G K I K D
Sbjct: 118 DDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADG 177
Query: 241 LSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQA-- 298
L R S+N +I G N A L M G++P+ T + I+ A
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 299 -----------------ASFQSN---------------FRDG-----LGVLKIMQQENLK 321
S Q+N F++G L V K M Q+N+
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV- 296
Query: 322 PLNSTLATLSV--ICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQ 377
P +S + + + +CS + D + ++P YN L+++ + + A
Sbjct: 297 PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD 356
Query: 378 VFAKMKQIKLLPDIRTYELL---FSLFGFVNSPYEHSNMLSQLHVAKRI---NAIERDMA 431
+ M+ + PD +Y+++ + G VN E + + + + N +
Sbjct: 357 LHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
G S LS+ NL+ + G + P++ T+ N ++H V+
Sbjct: 417 RYGDTSSALSVLNLMLSYGVK---------------------PNVYTN--NALIHGYVKG 453
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
+ A + M+ HPD+ TYN+++ L + A L M+R+G P TY
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLF 586
T L++ L + +A +LL R + GI +D + F
Sbjct: 514 TELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 133/332 (40%), Gaps = 29/332 (8%)
Query: 355 SPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDI-----------------RTYELL 397
SP + + +P++AV++F M + D+ + YEL
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 398 FSLFG-FVNSPYEHSNMLSQLHVAKRI-NAIE--RDMANNGVQHSHLSMKNLLNALGEER 453
+L G F ++ +L+ + KR A+E ++M G+ + + +L
Sbjct: 185 RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 454 MIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDS 513
IR E+F +K + + Y V+H A + + A N+F M G P
Sbjct: 245 QIRHAWEFFLEMKKR----DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 514 ETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
TYN M+ + ++A ++ M+R+G+ P TY LI+ L +F+ L++R
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSA-YVNSG 632
+G + + +N +R ++ + E M PN T + S +V
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Query: 633 FHNTAIEALQVLS---LRMMSEDGNILREKRR 661
+ + Q + LR+ S+ G+ L K R
Sbjct: 421 SEDMVVAGNQAFAKEILRLQSKSGSRLLRKFR 452
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQI--AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKS 531
P++A+ NV++ L G + + IF M G PDS TY ++
Sbjct: 154 PTVAS--LNVLIKALCR-NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 532 ASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLR 591
A L + M+ + +P TYT+LI L + +EA+ LE + GI+ +V +++ +
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 592 QACYK-RRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS 650
C R + +EL E M RPN VT + + A+E L ++L+ +
Sbjct: 271 GLCKDGRSLQAMELF-EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 651 EDGNI-------------LREKRRFVDEFILA 669
D + RE F+DE IL
Sbjct: 330 PDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 139/346 (40%), Gaps = 29/346 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
SF ++ + A+ LIV+MKI S I + D L V M
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNAL----LASCNVLNQ 371
+ + P T+ I + QL+LA F + E P +L A C
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT 172
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFS---LFGFVNSPYEHSNMLSQLHVAKRINAIER 428
+ +++F +M + PD TY L S FG ++ E + +++ +E+
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRID---EAKKLFTEM--------VEK 221
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHH 487
D A V ++ +L+N L + + E + Y E++ G P++ T Y+ ++
Sbjct: 222 DCAPTVVTYT-----SLINGLCGSKNVDEAMRYL---EEMKSKGIEPNVFT--YSSLMDG 271
Query: 488 LVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPV 547
L + + A+ +F+ M G P+ TY ++ + + A L+ M QG P
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
Y +I KF EA N L+ L GI + L +N ++ +
Sbjct: 332 AGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHL 488
+M +G + + L+ GE + R+++E F + K F Y P + YN +LH L
Sbjct: 177 EMIKDGYPTTACTFNLLICTCGEAGLARDVVEQF-IKSKTFNY-RPYKHS--YNAILHSL 232
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ ++ ++ ++++M G+ PD TYNI++ L L+ M++ GFSP
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TY L+ L K ALNLL R G++ V+ F T + +++ + ++
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 352
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSG 632
+ P+ V + + Y++ G
Sbjct: 353 TVKVGCTPDVVCYTVMITGYISGG 376
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 114/310 (36%), Gaps = 61/310 (19%)
Query: 326 TLATLSVICSKA-LQLDLAESFLDRISECLSP--HPYNALLASCNVLNQPERAVQVFAKM 382
T L C +A L D+ E F+ + P H YNA+L S + Q + V+ +M
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 383 KQIKLLPDIRTYEL-LFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLS 441
+ PD+ TY + +F+ F +L R+ + +M +G
Sbjct: 249 LEDGFTPDVLTYNIVMFANF--------------RLGKTDRLYRLLDEMVKDGF------ 288
Query: 442 MKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIF 501
+P L T YN++LHHL K A+N+
Sbjct: 289 -------------------------------SPDLYT--YNILLHHLATGNKPLAALNLL 315
Query: 502 KRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQD 561
M+ G P + ++D S ++ + ++ G +P YT +I +
Sbjct: 316 NHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISG 375
Query: 562 EKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTC 621
+ +A + + G +V +N+ +R C + +++ M PN V
Sbjct: 376 GELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFV-- 433
Query: 622 GYVFSAYVNS 631
V+S VN+
Sbjct: 434 --VYSTLVNN 441
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 125/268 (46%), Gaps = 23/268 (8%)
Query: 260 VIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQEN 319
+I+ K NY A+K+ M GV S+ TY+ ++ SF++++++ + MQ+ +
Sbjct: 260 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSD 316
Query: 320 LKPLNSTLATLSVICSKALQLDLAES-FLDRISECLSP--HPYNALLASCNVLNQPERAV 376
++P + A L +A + + A S F + + + P YN LL + + E+A
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 377 QVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQ 436
VF M++ ++ PD+ +Y + S +VN+ S+M KRI +G +
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLS--AYVNA----SDMEGAEKFFKRIKV-------DGFE 423
Query: 437 HSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQI 496
+ ++ L+ + + +++E V EK+ + G + T I ++ +
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMME---VYEKMRLSGIKANQT-ILTTIMDASGRCKNFGS 479
Query: 497 AINIFKRMKLCGYHPDSETYNIMVDCCS 524
A+ +K M+ CG PD + N+++ S
Sbjct: 480 ALGWYKEMESCGVPPDQKAKNVLLSLAS 507
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 39/351 (11%)
Query: 255 WSFNDV-----IHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGL 309
W+F+++ I K N+ A++++ + +G P+ +Y ++++ +
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 310 GVLKIMQQENLKPLNSTLATLSVICSKALQLD-------LAESFLDRISECLSPHP--YN 360
+ + MQ +P + T +I ++ D + E+ LD L P Y+
Sbjct: 202 AIFRRMQSSGPEP---SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 361 ALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVA 420
++ E+A +VF+ M + TY SL F S E S + Q
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN---SLMSFETSYKEVSKIYDQ---- 311
Query: 421 KRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATD 479
M + +Q +S L+ A G R E + F E++ G P+
Sbjct: 312 ---------MQRSDIQPDVVSYALLIKAYGRARREEEALSVF---EEMLDAGVRPTHKA- 358
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
YN++L + + A +FK M+ PD +Y M+ + A +
Sbjct: 359 -YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 417
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
GF P TY LIK + + + + E+ RL GI+ + + T +
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 24/265 (9%)
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER 428
N ER + V +KM P++ +Y L +G + AI R
Sbjct: 162 FNGAERVLSVLSKMGST---PNVISYTALMESYG-------------RGGKCNNAEAIFR 205
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD--IYNVVLH 486
M ++G + S ++ + +L E +E E F E L L D +Y+++++
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF---ETLLDEKKSPLKPDQKMYHMMIY 262
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+A + A +F M G + TYN ++ S SYK S + M R P
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQP 319
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
+Y LIK + + EAL++ E G++ +N L ++ + +
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 607 EYMHQEKVRPNPVTCGYVFSAYVNS 631
+ M ++++ P+ + + SAYVN+
Sbjct: 380 KSMRRDRIFPDLWSYTTMLSAYVNA 404
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/340 (17%), Positives = 140/340 (41%), Gaps = 28/340 (8%)
Query: 295 IIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECL 354
+I A NF VL ++ + P + L + + + AE+ R+
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS- 210
Query: 355 SPHP----YNALLASCNVLNQPERAVQVFAKM---KQIKLLPDIRTYELLFSLFGFVNSP 407
P P Y +L + ++ + A +VF + K+ L PD + Y ++ ++ +
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN- 269
Query: 408 YEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
YE A+++ + M GV S ++ +L++ E +E+ + + ++
Sbjct: 270 YEK---------ARKVFS---SMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQR 314
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ P + + Y +++ A++ + A+++F+ M G P + YNI++D +I
Sbjct: 315 SDI--QPDVVS--YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
+ A + M R P +YT ++ + A +R ++DG + +++ +
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 588 TFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSA 627
T ++ ++ + + E M ++ N + A
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 125/268 (46%), Gaps = 23/268 (8%)
Query: 260 VIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQEN 319
+I+ K NY A+K+ M GV S+ TY+ ++ SF++++++ + MQ+ +
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSD 309
Query: 320 LKPLNSTLATLSVICSKALQLDLAES-FLDRISECLSP--HPYNALLASCNVLNQPERAV 376
++P + A L +A + + A S F + + + P YN LL + + E+A
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 377 QVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQ 436
VF M++ ++ PD+ +Y + S +VN+ S+M KRI +G +
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLS--AYVNA----SDMEGAEKFFKRIKV-------DGFE 416
Query: 437 HSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQI 496
+ ++ L+ + + +++E V EK+ + G + T I ++ +
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMME---VYEKMRLSGIKANQT-ILTTIMDASGRCKNFGS 472
Query: 497 AINIFKRMKLCGYHPDSETYNIMVDCCS 524
A+ +K M+ CG PD + N+++ S
Sbjct: 473 ALGWYKEMESCGVPPDQKAKNVLLSLAS 500
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 39/351 (11%)
Query: 255 WSFNDV-----IHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGL 309
W+F+++ I K N+ A++++ + +G P+ +Y ++++ +
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 310 GVLKIMQQENLKPLNSTLATLSVICSKALQLD-------LAESFLDRISECLSPHP--YN 360
+ + MQ +P + T +I ++ D + E+ LD L P Y+
Sbjct: 195 AIFRRMQSSGPEP---SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 361 ALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVA 420
++ E+A +VF+ M + TY SL F S E S + Q
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN---SLMSFETSYKEVSKIYDQ---- 304
Query: 421 KRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATD 479
M + +Q +S L+ A G R E + F E++ G P+
Sbjct: 305 ---------MQRSDIQPDVVSYALLIKAYGRARREEEALSVF---EEMLDAGVRPTHKA- 351
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
YN++L + + A +FK M+ PD +Y M+ + A +
Sbjct: 352 -YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 410
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
GF P TY LIK + + + + E+ RL GI+ + + T +
Sbjct: 411 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 24/265 (9%)
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER 428
N ER + V +KM P++ +Y L +G + AI R
Sbjct: 155 FNGAERVLSVLSKMGST---PNVISYTALMESYG-------------RGGKCNNAEAIFR 198
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD--IYNVVLH 486
M ++G + S ++ + +L E +E E F E L L D +Y+++++
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF---ETLLDEKKSPLKPDQKMYHMMIY 255
Query: 487 HLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSP 546
+A + A +F M G + TYN ++ S SYK S + M R P
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQP 312
Query: 547 VTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIV 606
+Y LIK + + EAL++ E G++ +N L ++ + +
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 607 EYMHQEKVRPNPVTCGYVFSAYVNS 631
+ M ++++ P+ + + SAYVN+
Sbjct: 373 KSMRRDRIFPDLWSYTTMLSAYVNA 397
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/340 (17%), Positives = 141/340 (41%), Gaps = 28/340 (8%)
Query: 295 IIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECL 354
+I A NF VL ++ + P + L + + + AE+ R+ +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM-QSS 203
Query: 355 SPHP----YNALLASCNVLNQPERAVQVFAKM---KQIKLLPDIRTYELLFSLFGFVNSP 407
P P Y +L + ++ + A +VF + K+ L PD + Y ++ ++ +
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN- 262
Query: 408 YEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
YE A+++ + M GV S ++ +L++ E +E+ + + ++
Sbjct: 263 YEK---------ARKVFS---SMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQR 307
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ P + + Y +++ A++ + A+++F+ M G P + YNI++D +I
Sbjct: 308 SDI--QPDVVS--YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
+ A + M R P +YT ++ + A +R ++DG + +++ +
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 588 TFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSA 627
T ++ ++ + + E M ++ N + A
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 118/262 (45%), Gaps = 20/262 (7%)
Query: 385 IKLLPDIRTYELLFSLF-------GFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQH 437
+KLL + F+LF G+ +S + ++L +L + +N + R + Q
Sbjct: 14 LKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQE 73
Query: 438 SHLSMK---NLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKG 494
+++ G+ M + ++ F ++F P++ + YN +L+ VEA++
Sbjct: 74 CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGC-EPAIRS--YNTLLNAFVEAKQW 130
Query: 495 QIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
++F + G P+ +TYN+++ + ++ A + M ++GF P +Y+ +
Sbjct: 131 VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTV 190
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFNT----FLRQACYKRRIDIIELIVEYMH 610
I L + K ++AL L + G+ DV +N FL++ +K +++ + ++E
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE--- 247
Query: 611 QEKVRPNPVTCGYVFSAYVNSG 632
V PN T + S G
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCG 269
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 191/462 (41%), Gaps = 52/462 (11%)
Query: 213 RKGVQPLGLAHQTISTGNKKVKIAKLD-------ELSRRKHLQLMKVLRWSFNDVIHGCA 265
++G +P ++ T+ N K KLD E+S R + +N +I G
Sbjct: 177 KEGFKPDVFSYSTVI--NDLAKAGKLDDALELFDEMSERGVAPDVTC----YNILIDGFL 230
Query: 266 KEKNYMLAKKLIVQM-KILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQ-ENLKPL 323
KEK++ A +L ++ + V P+ T++ +I S D L + + M+Q E K L
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 324 NSTLATLSVICSKALQLDLAESFLDRISE---CLSPHPYNALLASCNVLNQPERAVQVFA 380
+ + + +C A +D AES + + E + YN +L + + +++++
Sbjct: 291 YTYSSLIHGLCD-AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 381 KMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHL 440
M+ K +I +Y +L N + + M+ +L AK A D G+ L
Sbjct: 350 IMEH-KNSVNIVSYNILIKGL-LENGKIDEATMIWRLMPAKGYAA---DKTTYGIFIHGL 404
Query: 441 SMKNLLN-ALGEERMI----------------------RELIEYFYVAEKLFVYGNPSLA 477
+ +N ALG + + + L E + +++ +G L
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG-VELN 463
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS--YKSASLL 535
+ + N ++ L+ + A + M G P +YNI++ C + ++ + AS
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI--CGLCKAGKFGEASAF 521
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ M+ G+ P TY+ L+ L +D K + AL L + G++ DV++ N + C
Sbjct: 522 VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTA 637
++D ++ M N VT + + G N A
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 149/383 (38%), Gaps = 21/383 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I K+K + A+ + M G KP +Y +I + D L + M
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQ 371
+ + P + L K A DR+ E S +P +N +++ + +
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAK-RINAIERDM 430
+ ++++ +MKQ + D+ TY L + + ++ ++L K I+ + +
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 431 ANNGVQHSH-----------LSMKNLLNALGEERMIRELIEYFYVAEKLFVY---GNPSL 476
G + KN +N + +I+ L+E + E ++
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 477 ATD--IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASL 534
A D Y + +H L A+ + + ++ G H D Y ++DC + + AS
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 535 LISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQAC 594
L+ M + G + ALI L++D + EA L +G + V+ +N + C
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 595 YKRRIDIIELIVEYMHQEKVRPN 617
+ V+ M + +P+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPD 533
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 5/207 (2%)
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G HS + ++L L E RM+ + + + +A + + + Q
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQ- 96
Query: 494 GQIAINIFKRMK-LCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A+++FKRM+ + G P +YN +++ + + L + G +P TY
Sbjct: 97 ---ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
LIK+ + ++F +A L+ +G + DV ++T + ++D + + M +
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIE 639
V P+ + ++ H TA+E
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAME 240
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 158/389 (40%), Gaps = 37/389 (9%)
Query: 288 SSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFL 347
+S Y +++ D +G+ +M Q P + L +K + DL SF
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 348 DRISECLSPH---PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV 404
+++ H YN L+ ++ A+ + KM ++ PDI T L + GF
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLN--GFC 159
Query: 405 NSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEE------RMIR-- 456
H N +S VA +E + V + L L+ E RM++
Sbjct: 160 -----HGNRISD-AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 457 ---ELIEYFYVAEKLFVYGNPSLATD---------------IYNVVLHHLVEAQKGQIAI 498
+L+ Y V L G+ LA + IY+ V+ L + + A+
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 499 NIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKIL 558
N+F M+ G P+ TY+ ++ C + AS L+S MI + +P T++ALI
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 559 LQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNP 618
++ K +A L E I ++ +++ + C R+ + ++E M ++ PN
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 619 VTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
VT + + + + + +E + +S R
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQR 422
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 156/372 (41%), Gaps = 45/372 (12%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ N +++G A L+ QM +G KP + T+ +I + + + ++ M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 316 QQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISEC---LSPHPYNALLASCNVLNQ 371
Q +P L + A ++ +C + DLA + L+++ + Y+ ++ S
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRG-DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA------ 425
+ A+ +F +M+ + P++ TY L S + S +LS + + ++IN
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM-IERKINPNLVTFS 327
Query: 426 ----------------------IERDMANNGVQHSHL-SMKNLLNALGEERMIRELIEYF 462
I+R + N +S L + +L+ LGE + + EL+
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM--- 384
Query: 463 YVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC 522
+ + P++ T YN +++ +A++ + +F+ M G ++ TY ++
Sbjct: 385 -IRKDCL----PNVVT--YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
R +A ++ M+ G P TY L+ L ++ K +A+ + E + ++ D
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 583 VLLFNTFLRQAC 594
+ +N + C
Sbjct: 498 IYTYNIMIEGMC 509
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 130/346 (37%), Gaps = 56/346 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ ++ + K + KL+ +M G KP++ TY+ +I + + ++ + V M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQP 372
Q+ +P T TL I +KA LD+A R+ E LSP Y+ ++
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A ++F +M P++ T+ ++ +L + YE + L RDM N
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN-YETALKLY------------RDMQN 527
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
G Q ++ ++ LG + E
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEE----------------------------------- 552
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
A +F M+ + PD Y ++VD + A M++ G P T
Sbjct: 553 ----AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCN 608
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
+L+ L+ + +EA NLL+ G+ + + T L C R
Sbjct: 609 SLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY-TLLLSCCTDAR 653
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 402 GFVNSPYEHSNMLSQLHVAKR---INAIERDMANNGVQHSHLSMKNLLNALGEERMIREL 458
GF + + ++ M+ L AK+ IN + +M +G + + ++ L+++ G ++E
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKG--QIAINIFKRMKLCGYHPDSETY 516
+ F ++ P T + +H A+ G IA+++++RM+ G PD+ TY
Sbjct: 414 MNVFNQMQEAGC--EPDRVTYCTLIDIH----AKAGFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
+++++C +A L M+ QG +P T+ +I + + + AL L +
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNT 636
G Q D + ++ + + ++ E + M ++ P+ G + + +G +
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Query: 637 AIEALQVL 644
A + Q +
Sbjct: 588 AWQWYQAM 595
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 44/332 (13%)
Query: 238 LDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQ 297
DE+++R LQ V SFN +I+G K N +L QM+ +P TY +I
Sbjct: 263 FDEITKRS-LQPTVV---SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 298 AASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDL-AESFLDRISECLSP 356
A ++ G+ M + L P + TL S+ ++DL ES+ +S+ L P
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Query: 357 HP--YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF---GFVNSPYEHS 411
YN L+ A + M + L PD TY L F G V + E
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE-- 436
Query: 412 NMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLL-------NALGEERMIRELIEYFYV 464
I ++M NG++ + L+ + ER +RE++
Sbjct: 437 --------------IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 465 AEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCS 524
+ + Y +++ + Q + K M+ G+ P TYN++++
Sbjct: 483 PDDV-----------TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531
Query: 525 ILRSYKSASLLISMMIRQGFSPVTCTYTALIK 556
L K+A +L+ M+ G P TY L++
Sbjct: 532 KLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 480 IYNVVLHHLVEAQKGQIAI--NIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
I+ ++H ++ G+I + +++M G PD YN +V+ +A ++
Sbjct: 347 IFTTLIHG--HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
MIR+G P TYT LI + AL + + +GI+LD + F+ + C +
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNI 655
R+ E + M + ++P+ VT + A+ G T + L+ M DG++
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL-----LKEMQSDGHV 517
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 24/340 (7%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F +++G + A L+ Q+ LG +P+ Y+ II + + L VLK M
Sbjct: 151 TFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFL-DRISECLSPH--PYNALLASCNVLNQP 372
++ ++P T +L + ++ L D + +SP ++AL+ Q
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A + + +M Q + P+I TY L +N H L AK++ + + +
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSL------INGLCIH----GLLDEAKKVLNV---LVS 317
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
G + ++ L+N + + + + ++ V + V G+ T YN + +A
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD----TFTYNTLYQGYCQAG 373
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT--CT 550
K A + RM CG HPD T+NI++D + K L+ + Q V T
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLD--GLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
Y +IK L + +K +A L L G+ DV+ + T +
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 151/372 (40%), Gaps = 30/372 (8%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
F+ ++ AK Y L +++LG+ ++ +I + L L M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQP 372
+ +P T +L + A S +D+I L P YN ++ S Q
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG-LGYEPNVVIYNTIIDSLCEKGQV 200
Query: 373 ERAVQVFAKMKQIKLLPDIRTY-ELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
A+ V MK++ + PD+ TY L+ LF HS V+ RI + DM
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLF--------HSGTWG---VSARILS---DMM 246
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD---IYNVVLHHL 488
G+ ++ L++ G+E + E + + E + NP++ T I + +H L
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQY--NEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
++ K + + + K G+ P++ TYN +++ + ++ +M R G T
Sbjct: 305 LDEAKKVLNVLVSK-----GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TY L + Q KF+ A +L R G+ D+ FN L C +I + +E
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 609 MHQEKVRPNPVT 620
+ + K +T
Sbjct: 420 LQKSKTVVGIIT 431
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSA 532
PS+ ++ +L + + K + I++F+ +++ G D ++ ++DC C R +
Sbjct: 77 PSIVD--FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 533 SLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQ 592
S L MM + GF P T+ +L+ +F EA++L+++ G + +V+++NT +
Sbjct: 135 SCLGKMM-KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193
Query: 593 ACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
C K +++ ++++M + +RP+ VT + + +SG
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 146/336 (43%), Gaps = 37/336 (11%)
Query: 323 LNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLNQPERAVQV 378
L S L ++ + L D+AES P P ++ LL + LN+ E + +
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAES---------HPLPSIVDFSRLLIAIAKLNKYEAVISL 101
Query: 379 FAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHS 438
F ++ + + D+ ++ L F ++L +A ++ + + M G + S
Sbjct: 102 FRHLEMLGISHDLYSFTTLIDCF----------CRCARLSLA--LSCLGK-MMKLGFEPS 148
Query: 439 HLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIA 497
++ +L+N + E + +++ G P++ IYN ++ L E + A
Sbjct: 149 IVTFGSLVNGFCH---VNRFYEAMSLVDQIVGLGYEPNVV--IYNTIIDSLCEKGQVNTA 203
Query: 498 INIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKI 557
+++ K MK G PD TYN ++ ++ ++ ++S M+R G SP T++ALI +
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 558 LLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPN 617
++ + EA + +++ +N+ + C +D + ++ + + PN
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 618 PVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
VT + + Y + + ++ L V MS DG
Sbjct: 324 AVTYNTLINGYCKAKRVDDGMKILCV-----MSRDG 354
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHL 488
+M +G + + L+ + GE + ++ + F + K F Y P + YN +L+ L
Sbjct: 174 EMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQF-MKSKTFNY-RPFKHS--YNAILNSL 229
Query: 489 VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
+ ++ ++ ++K+M G+ PD TYNI++ L L M R GFSP +
Sbjct: 230 LGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDS 289
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
TY L+ IL + K AL L + GI VL + T + ++ + ++
Sbjct: 290 YTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDE 349
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
M + RP+ V + + YV SG + A E + ++++
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
YN LL + L + +R ++F +M + PD TY +L + G N P L+
Sbjct: 257 YNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNH-- 314
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT 478
M G+ S L L++ L + E +YF + E + P +
Sbjct: 315 -----------MKEVGIDPSVLHYTTLIDGLSRAGNL-EACKYF-LDEMVKAGCRPDVVC 361
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
Y V++ V + + A +F+ M + G P+ TYN M+ + ++ A L+
Sbjct: 362 --YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEA 567
M +G +P Y+ L+ L + K +EA
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEA 448
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 173/417 (41%), Gaps = 25/417 (5%)
Query: 212 VRKGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWS---FNDVIHGCAKEK 268
+R V LG+ T+ + + ++ E R K V++ FN +I G K
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 269 NYMLAKKLIVQMKILG-VKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTL 327
A++L+V+MK+ P++ TY+ +I V+ M+++ +KP T+
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 328 ATLSVICSKALQLDLAES-FLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQ 384
T+ + L++A F+D E + + Y L+ +C ++ E+A+ + KM +
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 385 IKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKN 444
PD + Y L S G +H I +E+ + G L+
Sbjct: 505 AGCSPDAKIYYALIS--GLCQVRRDHD----------AIRVVEK-LKEGGFSLDLLAYNM 551
Query: 445 LLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM 504
L+ ++ ++ E EK P T YN ++ + + + + ++M
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEK--EGKKPDSIT--YNTLISFFGKHKDFESVERMMEQM 607
Query: 505 KLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
+ G P TY ++D CS+ ++ L M + +P T Y LI +
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
F +AL+L E ++ ++ +V +N + K + + + +++ M ++ PN +T
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 52/367 (14%)
Query: 354 LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNM 413
L P+NALL+ R + KM ++K+ PD+ T +L +N+ + +
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL------INTLCKSRRV 345
Query: 414 LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN 473
L V +++ D N ++ + L++ L + ++E E V KL
Sbjct: 346 DEALEVFEKMRGKRTD-DGNVIKADSIHFNTLIDGLCKVGRLKE-AEELLVRMKLEERCA 403
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMK-----------------LCGYHP----- 511
P+ T YN ++ A K + A + RMK +C +H
Sbjct: 404 PNAVT--YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 512 ----DSE---------TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKIL 558
D E TY ++ C + + + A M+ G SP Y ALI L
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 559 LQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNP 618
Q + ++A+ ++E+ + G LD+L +N + C K + + ++ M +E +P+
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS 581
Query: 619 VTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEFILAEDSAAESDI 678
+T + S + G H E+++ + + M EDG L I A S E D
Sbjct: 582 ITYNTLISFF---GKHKD-FESVERM-MEQMREDG--LDPTVTTYGAVIDAYCSVGELDE 634
Query: 679 LVKLFED 685
+KLF+D
Sbjct: 635 ALKLFKD 641
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 120/289 (41%), Gaps = 18/289 (6%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMK-QIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
+N L+ + + + A ++ +MK + + P+ TY L G+ + +L
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID--GYCRA--------GKL 422
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
AK + + R M + ++ + +++ ++ + + + +F EK V GN
Sbjct: 423 ETAKEV--VSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN---- 475
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
Y ++H + A+ +++M G PD++ Y ++ +R A ++
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
+ GFS Y LI + + +L +G + D + +NT + +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
+ +E ++E M ++ + P T G V AY + G + A++ + + L
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 163/391 (41%), Gaps = 56/391 (14%)
Query: 254 RWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLK 313
R + +++G + A L+ +M +G KP Y+ II + D K
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 314 IMQQENLKP-LNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLN 370
++++ ++P + + A ++ +C+ + D A D I + ++P+ Y+ALL +
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ A ++F +M ++ + PDI TY S++++ L + RI D
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTY----------------SSLINGLCLHDRI-----DE 313
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
AN M +L+ + G + +++ Y N +++ +
Sbjct: 314 ANQ--------MFDLMVSKG---CLADVVSY--------------------NTLINGFCK 342
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
A++ + + +F+ M G ++ TYN ++ A S M G SP T
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y L+ L + + +AL + E + + LD++ + T +R C +++ + +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEAL 641
+ ++P+ VT + S G + +EAL
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLH-EVEAL 492
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 167/402 (41%), Gaps = 26/402 (6%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQA--ASFQSNFRDGLGVLKI 314
FN ++ K K Y + L +M++LG++ T++ +I FQ + L +L
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL--ALSILGK 145
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHP----YNALLASCNVLN 370
M + +P T+ +L + ++ A S +D++ E + P YNA++ S
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTK 204
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ A F ++++ + P++ TY L + G NS S+ A R+ + DM
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVN--GLCNS--------SRWSDAARLLS---DM 251
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
+ + ++ LL+A + + E E F ++ + +P + T Y+ +++ L
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI--DPDIVT--YSSLINGLCL 307
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
+ A +F M G D +YN +++ + + L M ++G T T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y LI+ Q ++A + GI D+ +N L C ++ +I E M
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ ++ + VT V +G A LSL+ + D
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
PS+ +N +L +V+ +K + I++ K+M++ G D T+NI+++C A
Sbjct: 83 PSIVD--FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
++ M++ G+ P T +L+ + + ++A++L+++ G + D++ +N +
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTA 637
C +R++ + + ++ +RPN VT ++A VN G N++
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVT----YTALVN-GLCNSS 239
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 112/250 (44%), Gaps = 23/250 (9%)
Query: 356 PHP----YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHS 411
P P +N LL++ L + + + + KM+ + + D+ T+ ++ + F ++ S
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC---CCFQVS 137
Query: 412 NMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVY 471
LS L M G + +++ +L+N + + + + +K+
Sbjct: 138 LALSILG----------KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS---LVDKMVEI 184
Query: 472 G-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYK 530
G P + YN ++ L + ++ A + FK ++ G P+ TY +V+ +
Sbjct: 185 GYKPDIVA--YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 531 SASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
A+ L+S MI++ +P TY+AL+ +++ K EA L E I D++ +++ +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 591 RQACYKRRID 600
C RID
Sbjct: 303 NGLCLHDRID 312
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 120/312 (38%), Gaps = 50/312 (16%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF---GFVNSPYEHS---- 411
YN LL + N+ + A ++ +M PD +Y + S G V E +
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
Query: 412 ----------NMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEY 461
N L + H K + R+M G+ + +S L+N L I +
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 462 FY----------------VAEKLFVYGNPSLATDIYN------------VVLHHLVEA-- 491
+ + F+ G A D++N V + LV+
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 492 QKGQI--AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
G I A+++F M+ G P+ TY +++ + S A + + M+ G P
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
YT +++ L + KF EA +L+E + V FN F++ C R+D E + M
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 610 HQE-KVRPNPVT 620
Q+ + PN VT
Sbjct: 484 EQQHRCPPNIVT 495
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 162/438 (36%), Gaps = 63/438 (14%)
Query: 214 KGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLA 273
KG P +++ T+ + +V + K R+ + + + +N +I+G KE +Y A
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVK----EGRELAERFEPVVSVYNALINGLCKEHDYKGA 265
Query: 274 KKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVI 333
+L+ +M G+ P+ +Y +I L M + P TL++L
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Query: 334 C----SKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKL 387
C + LDL + L P+ YN L+ +AV VF+ M++I
Sbjct: 326 CFLRGTTFDALDLWNQMIRGFG--LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 388 LPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLN 447
P+IRTY L + F + ++ +++ + M +G + + N++
Sbjct: 384 SPNIRTYGSLINGFA------KRGSLDGAVYIWNK-------MLTSGCCPNVVVYTNMVE 430
Query: 448 ALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLC 507
AL +E + K N + + +N + L +A + A +F++M+
Sbjct: 431 ALCRHSKFKEAESLIEIMSK----ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 508 GYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEA 567
P P TY L+ L + + EA
Sbjct: 487 HRCP----------------------------------PNIVTYNELLDGLAKANRIEEA 512
Query: 568 LNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSA 627
L + G++ +NT L +C I +V M + P+ +T + A
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 628 YVNSGFHNTAIEALQVLS 645
Y G A + L ++S
Sbjct: 573 YCKQGKAERAAQMLDLVS 590
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 146/368 (39%), Gaps = 63/368 (17%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN +I G + + A K+ M I G+KP T+ +++ + + + L + M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVL------- 369
+ L+P TL K ++ + D + + +A +A CNV+
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQR----NKISADIAVCNVVIHLLFKC 614
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
++ E A + F + + K+ PDI TY + M+ +R++ ER
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTY----------------NTMICGYCSLRRLDEAER- 657
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
I EL+ K+ +G P+ T +++H L
Sbjct: 658 -------------------------IFELL-------KVTPFG-PNTVT--LTILIHVLC 682
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ AI +F M G P++ TY ++D S + + L M +G SP
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
+Y+ +I L + + +EA N+ + + DV+ + +R C R+ L+ E+M
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Query: 610 HQEKVRPN 617
+ V+P+
Sbjct: 803 LRNGVKPD 810
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 158/399 (39%), Gaps = 54/399 (13%)
Query: 284 GVKPSSCTYDGIIQAASF-QSNFRDGLGVLKIMQQENLK----PLNSTLATLSVICSKAL 338
G++PS + G + A F + L +++ + + N L LSV
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD----- 265
Query: 339 QLDLAESFLDRISECLSPHPYNALLASCNVLN------QPERAVQVFAKMKQIKLLPDIR 392
Q+++A L + +C P P ++ C ++N + +RA +F M+Q + PD+
Sbjct: 266 QIEVASRLLSLVLDC-GPAP--NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 393 TYELLFSLFGFVNSPYEHSNMLSQ-LHVAKRINAI-----------ERDMANNGVQHSHL 440
Y L + + SQ LH +++ + D+A V + +
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 441 SMKNLL-NALGEERMIRELIEYFYVAEKLFVYGN-------PSLATDIYNVVLHHLVEAQ 492
+ + N + +I+ L + + E +YG PS+ T Y+ ++ +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT--YSSLIDGFCKCG 440
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM-----MIRQGFSPV 547
+ +++ M GY PD Y ++VD S K +L +M M+ Q
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS-----KQGLMLHAMRFSVKMLGQSIRLN 495
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE 607
+ +LI + +F+EAL + + GI+ DV F T +R + + R++ +
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 608 YMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
M + + P+ + + A+ H LQ+ L
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCK---HMKPTIGLQLFDL 591
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
+YN +LH L + K A ++ MK P+ T+NI++ + + +L+
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKC 274
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
GF P T T ++++L + + +EAL +LER G ++DV+ NT ++ C ++
Sbjct: 275 FSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKM 334
Query: 600 DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
+ + M ++ PN T + + Y + G ++A++
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 391 IRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIER---DMANN-GVQHSHLSMKNLL 446
+ T+ + GF++S + + +L V +R + + + +M ++ G+ ++
Sbjct: 60 LETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTII 119
Query: 447 NALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKR-MK 505
G R+I+ +I + K + PSL ++N +L LV+ + IA F R M
Sbjct: 120 RGFGRARLIKRVISVVDLVSKFGI--KPSLK--VFNSILDVLVK-EDIDIAREFFTRKMM 174
Query: 506 LCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFN 565
G H D TY I++ S+ L+ +M G +P Y L+ L ++ K
Sbjct: 175 ASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVG 234
Query: 566 EALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVF 625
A +L+ + + + + FN + C ++++ +++E P+ VT V
Sbjct: 235 RARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVM 290
Query: 626 SAYVNSGFHNTAIEALQVLSLRMMSEDGNI 655
N G + A+E L+ R+ S+ G +
Sbjct: 291 EVLCNEGRVSEALEVLE----RVESKGGKV 316
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 180/420 (42%), Gaps = 30/420 (7%)
Query: 212 VRKGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLR---WSFNDVIHGCAKEK 268
+ +G P + + T+ G K+ +L E S + + +R +++ +I G
Sbjct: 274 LERGDSPCAITYNTLIRGF--CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 269 NYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLA 328
A +L+ M +P++ TY+ II D + ++++M++ +P N T
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 329 TL-SVICSKALQLDLAESFLD---RISECLSPH--PYNALLASCNVLNQPERAVQVFAKM 382
L +C+K LD A L + S P YNAL+ N+ +A+ ++ +
Sbjct: 392 ILLGGLCAKG-DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 383 KQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSM 442
+ D T +L +NS + ++ + + K+I+ + + N ++ +M
Sbjct: 451 VEKLGAGDRVTTNIL------LNSTLKAGDVNKAMELWKQIS--DSKIVRN--SDTYTAM 500
Query: 443 KNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFK 502
+ G + + L+ V+E PS+ YN +L L + A +F+
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSEL-----QPSVFD--YNCLLSSLCKEGSLDQAWRLFE 553
Query: 503 RMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDE 562
M+ PD ++NIM+D KSA L+ M R G SP TY+ LI L+
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 563 KFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID-IIELIVEYMHQEKVRPNPVTC 621
+EA++ ++ G + D + ++ L+ + D + EL+ + + ++ V +TC
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
+AV + +M++ L+PD+ +Y + GF E + L +A +M +
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIR--GFC----EGKELEKALELAN-------EMKGS 206
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G S ++ L++A + + E + + + E F+ L +Y ++ + +
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGF--LKEMKFMGLEADLV--VYTSLIRGFCDCGE 262
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
+F + G P + TYN ++ L K AS + MI +G P TYT
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI-DIIELIVEYMHQE 612
LI L K EAL LL + + + +N + + C + D +E IVE M +
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE-IVELMKKR 381
Query: 613 KVRPNPVT 620
+ RP+ +T
Sbjct: 382 RTRPDNIT 389
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 169/444 (38%), Gaps = 62/444 (13%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+S+N VI G + K A +L +MK G S T+ +I A + +G LK
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE-CLSPHP--YNALLASCNVLNQ 371
M+ L+ +L +LD ++ D + E SP YN L+ L Q
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKR--------- 422
+ A ++F M + + P++ TY L V E +L+ L + K
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN-LMIEKDEEPNAVTYN 356
Query: 423 --INAIERD------------MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL 468
IN + +D M + +++ LL L + + E + Y+ K
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 469 FVYGNPSL------------------ATDIY---------------NVVLHHLVEAQKGQ 495
Y +P + A DIY N++L+ ++A
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 496 IAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
A+ ++K++ +S+TY M+D C + LL M + + P Y L
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE-LQPSVFDYNCL 535
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKV 614
+ L ++ ++A L E + D DV+ FN + + I E ++ M + +
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 615 RPNPVTCGYVFSAYVNSGFHNTAI 638
P+ T + + ++ G+ + AI
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAI 619
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 173/417 (41%), Gaps = 25/417 (5%)
Query: 212 VRKGVQPLGLAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWS---FNDVIHGCAKEK 268
+R V LG+ T+ + + ++ E R K V++ FN +I G K
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 269 NYMLAKKLIVQMKILG-VKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTL 327
A++L+V+MK+ P++ TY+ +I V+ M+++ +KP T+
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 328 ATLSVICSKALQLDLAES-FLDRISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQ 384
T+ + L++A F+D E + + Y L+ +C ++ E+A+ + KM +
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 385 IKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKN 444
PD + Y L S G +H I +E+ + G L+
Sbjct: 505 AGCSPDAKIYYALIS--GLCQVRRDHD----------AIRVVEK-LKEGGFSLDLLAYNM 551
Query: 445 LLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM 504
L+ ++ ++ E EK P T YN ++ + + + + ++M
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEK--EGKKPDSIT--YNTLISFFGKHKDFESVERMMEQM 607
Query: 505 KLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
+ G P TY ++D CS+ ++ L M + +P T Y LI +
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
F +AL+L E ++ ++ +V +N + K + + + +++ M ++ PN +T
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 52/367 (14%)
Query: 354 LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNM 413
L P+NALL+ R + KM ++K+ PD+ T +L +N+ + +
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL------INTLCKSRRV 345
Query: 414 LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN 473
L V +++ D N ++ + L++ L + ++E E V KL
Sbjct: 346 DEALEVFEQMRGKRTD-DGNVIKADSIHFNTLIDGLCKVGRLKE-AEELLVRMKLEERCV 403
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMK-----------------LCGYHP----- 511
P+ T YN ++ A K + A + RMK +C +H
Sbjct: 404 PNAVT--YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 512 ----DSE---------TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKIL 558
D E TY ++ C + + + A M+ G SP Y ALI L
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 559 LQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNP 618
Q + ++A+ ++E+ + G LD+L +N + C K + + ++ M +E +P+
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 619 VTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEFILAEDSAAESDI 678
+T + S + G H E+++ + + M EDG L I A S E D
Sbjct: 582 ITYNTLISFF---GKHKD-FESVERM-MEQMREDG--LDPTVTTYGAVIDAYCSVGELDE 634
Query: 679 LVKLFED 685
+KLF+D
Sbjct: 635 ALKLFKD 641
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 121/289 (41%), Gaps = 18/289 (6%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMK-QIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
+N L+ + + + A ++ +MK + + +P+ TY L G+ + +L
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID--GYCRA--------GKL 422
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
AK + + R M + ++ + +++ ++ + + + +F EK V GN
Sbjct: 423 ETAKEV--VSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN---- 475
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
Y ++H + A+ +++M G PD++ Y ++ +R A ++
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
+ GFS Y LI + + +L +G + D + +NT + +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
+ +E ++E M ++ + P T G V AY + G + A++ + + L
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 13/214 (6%)
Query: 441 SMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQI-AIN 499
+ + LL AL I + E+ ++KLF + + +NV+L+ A
Sbjct: 226 AFQGLLCALCRHGHIEKAEEFMLASKKLF-----PVDVEGFNVILNGWCNIWTDVTEAKR 280
Query: 500 IFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILL 559
I++ M P+ ++Y+ M+ C S + + + L M ++G +P Y +L+ +L
Sbjct: 281 IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLT 340
Query: 560 QDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPV 619
+++ F+EA+ L+++ +G++ D + +N+ +R C ++D+ ++ M E + P V
Sbjct: 341 REDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPT-V 399
Query: 620 TCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
+ F VN F T L+VL +S+ G
Sbjct: 400 DTFHAFLEAVN--FEKT----LEVLGQMKISDLG 427
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 154/358 (43%), Gaps = 51/358 (14%)
Query: 276 LIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICS 335
L V+M V P+ T+ G+++A R G +++Q + + L L +V+C+
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEAC------RGGSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 336 KALQLDLAESFLD---RISECLSPHPYNALLASCNVLNQPE---RAVQVFAKMKQIKLLP 389
+ L F+D R+ + L +++ +A + L++ E A+++F M + ++P
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP 286
Query: 390 DIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNAL 449
+PY S++LS K+I ++E G Q L +K L
Sbjct: 287 ----------------TPYAFSSVLS---ACKKIESLEI-----GEQLHGLVLK--LGFS 320
Query: 450 GEERMIRELIE-YFYVAEKL---FVYGNPSLATDI-YNVVLHHLVEAQKGQIAINIFKRM 504
+ + L+ YF++ + ++ N S + YN +++ L + G+ A+ +FKRM
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 505 KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKF 564
L G PDS T +V CS + L + + GF+ AL+ + +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 565 NEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIE--LIVEYMHQEKVRPNPVT 620
AL+ T ++ +V+L+N L Y D+ I M E++ PN T
Sbjct: 441 ETALDYFLETEVE----NVVLWNVML--VAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 135/351 (38%), Gaps = 31/351 (8%)
Query: 279 QMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKP-LNSTLATLSVICSKA 337
+M LG KP+ + +I + + + +L+ M + KP + + A + +C +
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 338 LQLDLAESFLDRI-SECLSP--HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTY 394
FL + S+ P H Y +++ ++ RA +F++MK+ L P++ TY
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 395 ELLFSLF---GFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE 451
L + G YE N+ M + G + + +++L +
Sbjct: 397 TTLINGHCKAGSFGRAYELMNL----------------MGDEGFMPNIYTYNAAIDSLCK 440
Query: 452 ERMIRELIEYFYVAEKLFVYGNPSLATD--IYNVVLHHLVEAQKGQIAINIFKRMKLCGY 509
+ E E + K F G L D Y +++ + A+ F RM G+
Sbjct: 441 KSRAPEAYE---LLNKAFSCG---LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 510 HPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALN 569
D NI++ + K + L +++ G P TYT++I ++ + AL
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 570 LLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+ G D + + + C K +D + E M + P VT
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
+AN +Q +H M+ +L E + E + + + PS T N VL V
Sbjct: 138 LANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGL--TPSSIT--MNCVLEIAV 193
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
E + A N+F M + G PDS +Y +MV C + A ++ MI++GF P
Sbjct: 194 ELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA 253
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYM 609
T T ++ L ++ N A+ + G + +++ F + + C K I ++E M
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 610 HQEKVRPNPVT 620
+ +PN T
Sbjct: 314 VRNGWKPNVYT 324
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 27/335 (8%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
A +++ M+ G+ PSS T + +++ A V M + P +S+ + +
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 333 ICSKALQLDLAESFLDRISECLSPHPYNA-----LLASC--NVLNQPERAVQVFAKMKQI 385
C + ++ A+ +L + + P NA L A C ++N RA+ F KM +
Sbjct: 226 GCFRDGKIQEADRWLTGMIQ-RGFIPDNATCTLILTALCENGLVN---RAIWYFRKMIDL 281
Query: 386 KLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNL 445
P++ + L S + ML + M NG + + + L
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEE-------------MVRNGWKPNVYTHTAL 328
Query: 446 LNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMK 505
++ L + + F + Y P++ T Y ++ + K A +F RMK
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTY-KPNVHT--YTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 506 LCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFN 565
G P+ TY +++ S+ A L+++M +GF P TY A I L + +
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 566 EALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
EA LL + G++ D + + +++ C + I+
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 156/381 (40%), Gaps = 53/381 (13%)
Query: 289 SCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLD 348
+ T++ +I D + M + + T T+ C L AES L
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 349 RISE-CLSP--HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVN 405
++ E +SP YN LL+ E A++ + K++++ L PD T+ +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL------- 417
Query: 406 SPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMI---RELIEYF 462
++L Q + + A+ +M N ++ S+ ++ E ++ + L E F
Sbjct: 418 ------HILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
Query: 463 -----------------YVAEKLFV------YGNPSLA---TDI--YNVVLHHLVEAQKG 494
Y + L+V YG +++ D+ YNV++ +A+
Sbjct: 472 QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLH 531
Query: 495 QIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
+ A+++FK MK G PD TYN + + + A +++ M+ G P TY A+
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 555 IKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY---MHQ 611
I ++ ++A++L E G++ + +++ + + ++E ++Y M +
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA---ESGMVEEAIQYFRMMEE 648
Query: 612 EKVRPNPVTCGYVFSAYVNSG 632
V+ N + + AY G
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVG 669
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%)
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T +N ++ +A + A N+F M G D+ T+N M+ C A L+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
M +G SP T TY L+ + AL + R G+ D + L C ++
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGF 633
+ +E ++ M + +R + + + YVN G
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL 460
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 152/360 (42%), Gaps = 40/360 (11%)
Query: 251 KVLRWSFNDVIHGCAKE--KNYMLAKKLIVQ--MKILGVKPSSCTYDGIIQAASFQSNFR 306
K ++WS DV G K + + L++Q M+ G++ ++ Y+ ++ A + ++
Sbjct: 338 KGVKWS-QDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIE 396
Query: 307 DGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPH--PYNALL 363
+ G+ M+ + LKP +T L ++ +Q D+ E+ L + + L P+ Y L+
Sbjct: 397 EVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLI 456
Query: 364 ASCNVLNQ-PERAVQVFAKMKQIKLLPDIRTYELL---FSLFGFVNSPYEHSNMLSQLHV 419
++ + + A F +MK++ L P +Y L +S+ G+ Y + + +
Sbjct: 457 SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Query: 420 AKRI-------NAIERD------------MANNGVQHSHLSMKNLLNALGEERMIRELIE 460
+ +A R M ++ + ++ LL+ ++ + IE
Sbjct: 517 KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL---YIE 573
Query: 461 YFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIM 519
V + G PS+ T YN++++ + + K M PDS TY+ M
Sbjct: 574 ARDVVSEFSKMGLQPSVMT--YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 520 VDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGI 579
+ +R +K A MM++ G P +Y L IL E + N ++T + GI
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAIL---EDKAKTKNRKDKTAILGI 688
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 149/351 (42%), Gaps = 32/351 (9%)
Query: 292 YDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQ--LDLAESFLDR 349
Y+ I S + D V + M + N+ P N T A L KA + ++ E F ++
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF-EK 334
Query: 350 ISEC---LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNS 406
+SE S + L+ S E A+ + +M++ + + Y L
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD------- 387
Query: 407 PYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAE 466
Y SN + + + + +M + G++ S + L++A RM +++E + E
Sbjct: 388 AYNKSNHIEE------VEGLFTEMRDKGLKPSAATYNILMDAYAR-RMQPDIVETL-LRE 439
Query: 467 KLFVYGNPSLATDIYNVVLHHLVEAQK-GQIAINIFKRMKLCGYHPDSETYNIMVDCCSI 525
+ P++ + Y ++ +K +A + F RMK G P S +Y ++ S+
Sbjct: 440 MEDLGLEPNVKS--YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSV 497
Query: 526 LRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQD---EKFNEALNLLERTRLDGIQLD 582
++ A M ++G P TYT+++ + K E L+ R ++ G ++
Sbjct: 498 SGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT 557
Query: 583 V-LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
L + F +Q Y I+ +++ E+ + ++P+ +T + +AY G
Sbjct: 558 YNTLLDGFAKQGLY---IEARDVVSEF-SKMGLQPSVMTYNMLMNAYARGG 604
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 52/367 (14%)
Query: 354 LSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNM 413
L P+NALL+ R + KM ++K+ PD+ T +L +N+ + +
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL------INTLCKSRRV 345
Query: 414 LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN 473
L V +++ D N ++ + L++ L + ++E E V KL
Sbjct: 346 DEALEVFEQMRGKRTD-DGNVIKADSIHFNTLIDGLCKVGRLKE-AEELLVRMKLEERCV 403
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMK-----------------LCGYHP----- 511
P+ T YN ++ A K + A + RMK +C +H
Sbjct: 404 PNAVT--YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 512 ----DSE---------TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKIL 558
D E TY ++ C + + + A M+ G SP Y ALI L
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 559 LQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNP 618
Q + ++A+ ++E+ + G LD+L +N + C K + + ++ M +E +P+
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 619 VTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEFILAEDSAAESDI 678
+T + S + G H E+++ + + M EDG L I A S E D
Sbjct: 582 ITYNTLISFF---GKHKD-FESVERM-MEQMREDG--LDPTVTTYGAVIDAYCSVGELDE 634
Query: 679 LVKLFED 685
+KLF+D
Sbjct: 635 ALKLFKD 641
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 137/328 (41%), Gaps = 35/328 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I G + AK+++ +MK +KP+ T + I+ + M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPHP--YNALLASCNVLNQP 372
++E +K T TL C ++ A + +++ E SP Y AL++ + +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A++V K+K+ D+ Y +L LF N+ + ML+ DM
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT-------------DMEK 574
Query: 433 NGVQHSHLSMKNLLNALGE-------ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVL 485
G + ++ L++ G+ ERM+ ++ E +P++ T Y V+
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL---------DPTVTT--YGAVI 623
Query: 486 HHLVEAQKGQIAINIFKRMKL-CGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
+ A+ +FK M L +P++ YNI+++ S L ++ A L M +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLE 572
P TY AL K L + + L L++
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMD 711
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 121/289 (41%), Gaps = 18/289 (6%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMK-QIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
+N L+ + + + A ++ +MK + + +P+ TY L G+ + +L
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID--GYCRA--------GKL 422
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
AK + + R M + ++ + +++ ++ + + + +F EK V GN
Sbjct: 423 ETAKEV--VSR-MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN---- 475
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
Y ++H + A+ +++M G PD++ Y ++ +R A ++
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
+ GFS Y LI + + +L +G + D + +NT + +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSL 646
+ +E ++E M ++ + P T G V AY + G + A++ + + L
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/407 (19%), Positives = 158/407 (38%), Gaps = 70/407 (17%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDG----LG 310
++++ +I ++E + KL M GV P + I+Q + + G
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 311 VLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLN 370
V+K+ L+ NS LA + +K +LD A F R+ E + LLA C
Sbjct: 207 VIKLGMSSCLRVSNSILA----VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN-G 261
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ E AV++ +M++ + P + T+ +L + N L + A +
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGY----------NQLGKCDAAMDL------- 304
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
+ +E F + +F + T + + ++H+ +
Sbjct: 305 -------------------------MQKMETFGITADVFTW------TAMISGLIHNGMR 333
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
Q A+++F++M L G P++ T V CS L+ S + S+ ++ GF
Sbjct: 334 YQ----ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
+L+ + + K +A + + + DV +N+ + C + M
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILR 657
+RPN +T + S Y+ +G A++ Q M +DG + R
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQ-----RMEKDGKVQR 487
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 429 DMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLF--VYGNPSLATDI--YNVV 484
+M N + S LS LL+A L + F V E+LF + G S+ DI YN +
Sbjct: 134 EMPNRDCKRSVLSFNALLSAY-------RLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
+ L E A+ + ++ G PD T+N ++ + ++ + + M+ +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
+ TY A + L + K E +NL + G++ DV FN +R + + ++D E
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 605 IVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
+ + + RP+ T + A +G +AIE
Sbjct: 307 WYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIE 341
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 19/262 (7%)
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
E A+ VF +MK+ + P TY L+ +L+G + Y M +L+ +M +
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY----MSWKLYC---------EMRS 292
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEA 491
+ + + + L+NA E + + E F E+L G P + +YN ++ A
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCEKAEEIF---EQLQEDGLEPDVY--VYNALMESYSRA 347
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
A IF M+ G PD +YNIMVD + A + M R G +P ++
Sbjct: 348 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
L+ + + +++ +G++ D + N+ L + +E I+ M
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 612 EKVRPNPVTCGYVFSAYVNSGF 633
+ T + + Y +GF
Sbjct: 468 GPCTADISTYNILINIYGKAGF 489
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 141/358 (39%), Gaps = 71/358 (19%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I+ K ++ KL +M+ KP+ CTY ++ A + R+GL
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA-----REGL------ 314
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE-CLSP--HPYNALLASCNVLNQP 372
C K AE +++ E L P + YNAL+ S + P
Sbjct: 315 ------------------CEK------AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVN-----------------SPYEHSNML- 414
A ++F+ M+ + PD +Y ++ +G +P S+ML
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 415 ----SQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFV 470
S+ + AI ++M+ NGV+ + ++LN G + F EK+
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR-------LGQFTKMEKILA 463
Query: 471 -YGNPSLATDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
N DI YN++++ +A + +F +K + PD T+ + S +
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 523
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLL 585
Y + MI G +P T L+ +E+ + ++L RT G+ + L+
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL-RTMHKGVTVSSLV 580
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 157/372 (42%), Gaps = 45/372 (12%)
Query: 291 TYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQL---DLAESFL 347
TY ++ Q D + L+ + +++ P ++ + + I S +L D+A+SF
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP---SVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 348 DRISEC-LSPHPY--NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL---FSLF 401
+ +C L P Y N L+ ++ A+++ + M + + PD TY +L F L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 402 GFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA---LGEERMIREL 458
G ++ +E + RDM + G+ ++ LL LG M L
Sbjct: 306 GMISGAWE----------------VIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNI 518
++ + G + +V+L L + + A+++F +MK G PD Y+I
Sbjct: 350 LK------DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 519 MVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDG 578
++ L + A L M + P + T+ AL+ L Q EA +LL+ G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 579 IQLDVLLFNT----FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFH 634
LD++L+N + + C + +++ ++++E + P+ T + Y +
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE----TGITPSVATFNSLIYGYCKTQNI 519
Query: 635 NTAIEALQVLSL 646
A + L V+ L
Sbjct: 520 AEARKILDVIKL 531
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 161/407 (39%), Gaps = 48/407 (11%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+S N +I+G + A +L M GV+P S TY+ + + V++
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 315 MQQENLKPLNSTLATLSVICSKA------LQLDLAESFLDRISECLSPHPYNALLASCNV 368
M + L P T L +C + + L L + L R E S P + +L+
Sbjct: 318 MLDKGLSPDVITYTIL--LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYEL----LFSLFGFVNSPYEHSNML-------SQL 417
+ + A+ +F +MK L PD+ Y + L L F + + + M S+
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 418 HVAKRINAIERDM-----------ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAE 466
H A + ++ M ++G + +++ + I E +E F V
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 467 KLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSIL 526
+ + PS+AT +N +++ + Q A I +KL G P +Y ++D +
Sbjct: 496 ETGI--TPSVAT--FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 527 RSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL---------- 576
+ KS L M +G P TY+ + K L + K +E N + R R+
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-HENCNHVLRERIFEKCKQGLRD 610
Query: 577 ---DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+GI D + +NT ++ C + + + +E M + + T
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 657
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 143/378 (37%), Gaps = 47/378 (12%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN +I ++ Y A+ L VQ+ P+ TY +I+A VL MQ
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAV 376
++ P T+ V A E + R E A+
Sbjct: 240 NHHVSP-----KTIGVTVYNAY----IEGLMKR-------------------KGNTEEAI 271
Query: 377 QVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQ 436
VF +MK+ + P TY L+ +L+G + Y M +L+ +M ++ +
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSY----MSWKLYC---------EMRSHQCK 318
Query: 437 HSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQ 495
+ + L+NA E + + E F E+L G P + +YN ++ A
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIF---EQLQEDGLEPDVY--VYNALMESYSRAGYPY 373
Query: 496 IAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALI 555
A IF M+ G PD +YNIMVD + A + M R G +P ++ L+
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 556 KILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVR 615
+ + +++ +G++ D + N+ L + +E I+ M
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 616 PNPVTCGYVFSAYVNSGF 633
+ T + + Y +GF
Sbjct: 494 ADISTYNILINIYGKAGF 511
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 137/355 (38%), Gaps = 65/355 (18%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I+ K ++ KL +M+ KP+ CTY ++ A + + + + +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERA 375
Q++ L+P + YNAL+ S + P A
Sbjct: 348 QEDGLEP--------------------------------DVYVYNALMESYSRAGYPYGA 375
Query: 376 VQVFAKMKQIKLLPDIRTYELLFSLFGFVN-----------------SPYEHSNML---- 414
++F+ M+ + PD +Y ++ +G +P S+ML
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 415 -SQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFV-YG 472
S+ + AI ++M+ NGV+ + ++LN G + F EK+
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR-------LGQFTKMEKILAEME 488
Query: 473 NPSLATDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYK 530
N DI YN++++ +A + +F +K + PD T+ + S + Y
Sbjct: 489 NGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYV 548
Query: 531 SASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLL 585
+ MI G +P T L+ +E+ + ++L RT G+ + L+
Sbjct: 549 KCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL-RTMHKGVTVSSLV 602
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 160/392 (40%), Gaps = 33/392 (8%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ +I G ++ A + Q+ G++PS TY +I N R G + + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI---SECLSPHPYNALLASCNVLNQP 372
+ P L SK + A F ++ S L+ +N+L+ LN+
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEH--SNMLSQLHVAKRINAIERDM 430
+ A++VF M + PD+ T+ + + ++ +H + QL + N I D+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 431 ANNGVQ-------HSHLSMKNLLNALGEERMIRELIEYFYV------------AEKLF-- 469
A V H N L E +M +++ Y + AE++F
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 470 ----VYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSI 525
+G P+ T +++H L + AI +F M G P++ TY ++D S
Sbjct: 633 LKVTPFG-PNTVT--LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 526 LRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLL 585
+ + L M +G SP +Y+ +I L + + +EA N+ + + DV+
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749
Query: 586 FNTFLRQACYKRRIDIIELIVEYMHQEKVRPN 617
+ +R C R+ L+ E+M + V+P+
Sbjct: 750 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 140/349 (40%), Gaps = 38/349 (10%)
Query: 284 GVKPSSCTYDGIIQAASF-QSNFRDGLGVLKIMQQENLK----PLNSTLATLSVICSKAL 338
G++PS + G + A F + L +++ + + N L LSV
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD----- 265
Query: 339 QLDLAESFLDRISECLSPHPYNALLASCNVLN------QPERAVQVFAKMKQIKLLPDIR 392
Q+++A L + +C P P ++ C ++N + +RA +F M+Q + PD+
Sbjct: 266 QIEVASRLLSLVLDC-GPAP--NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 393 TYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEE 452
Y L Y + ML H + + GV+ + + ++ +
Sbjct: 323 AYSTLID-------GYFKAGMLGMGH------KLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 453 RMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
+L V +++ G +P++ T Y +++ L + + A ++ ++ G P
Sbjct: 370 G---DLATASVVYKRMLCQGISPNVVT--YTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 512 DSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
TY+ ++D + +S L MI+ G+ P Y L+ L + A+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 572 ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+ I+L+V++FN+ + C R D + M ++P+ T
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 466 EKLFVYGNPSLATDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
E+ VYG+ S DI YN ++H L K + A+ ++ +K+ G+ PD+ TY I++ C
Sbjct: 276 ERSSVYGS-SFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGC 334
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
A + M GF P T Y L+ L+ K EA L E+ +G++
Sbjct: 335 CKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASC 394
Query: 584 LLFNTFL 590
+N +
Sbjct: 395 WTYNILI 401
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 460 EYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMK------LCGYHPDS 513
E+ V EKL T YN+ +H A+++FK MK + PD
Sbjct: 230 EFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDI 289
Query: 514 ETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
TYN ++ + K A ++ + G P TY LI+ + + ++A+ +
Sbjct: 290 CTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGE 349
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGF 633
+ +G D +++N L R++ + E M QE VR +C + ++ ++ F
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR---ASC-WTYNILIDGLF 405
Query: 634 HNTAIEALQVLSLRMMSEDGNILREKRRFVDEFILA 669
N EA L L++K +FVD +
Sbjct: 406 RNGRAEAGFTLFCD--------LKKKGQFVDAITFS 433
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 153/362 (42%), Gaps = 37/362 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N ++ AK + + ++ +M G+ T+ ++A + + +G+ ++M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLAS-CNVLNQP 372
++ K T+ L +A A+ D++ E +P+ Y LL C V N
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRIN-------- 424
E A +++ M L PDI + ++ L G + S + S+ + HV K
Sbjct: 316 E-AARIWNDMIDQGLKPDIVAHNVM--LEGLLRS-RKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 425 ---------------AIE--RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
AIE DM ++G+Q L+ G ++ + + E + ++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE---LLKE 428
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ G+P YN ++ + + + A I+ +M P T+N+++ + R
Sbjct: 429 MQEKGHPPDGK-TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
+Y+ + MI++G P +YT LI+ L+ + K EA LE G++ ++ +N
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Query: 588 TF 589
F
Sbjct: 548 KF 549
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 110/283 (38%), Gaps = 18/283 (6%)
Query: 360 NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHV 419
N LL S + A +F K+K+ + P++ TY +L + + V + E +
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAAR------- 319
Query: 420 AKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD 479
I DM + G++ ++ +L L R + I+ F+V + P
Sbjct: 320 ------IWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS----KGPCPNVR 369
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
Y +++ + + AI F M G PD+ Y ++ + + L+ M
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 429
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
+G P TY ALIK++ + A + + + I+ + FN ++ R
Sbjct: 430 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 489
Query: 600 DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
++ + E M ++ + P+ + + + G A L+
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 120/308 (38%), Gaps = 26/308 (8%)
Query: 326 TLATLSVICSKALQLDLAESFLDRISE--CLSPHPYNALLASCNVLNQPERAVQVFAKMK 383
T ++ I +K Q + S L+ + L+ + + + + ++AV +F MK
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 384 QIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMK 443
+ K + T L G E + +L ER N ++
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK--------ERFTPN------MMTYT 302
Query: 444 NLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVVLHHLVEAQKGQIAINIF 501
LLN +R LIE + + G L DI +NV+L L+ ++K AI +F
Sbjct: 303 VLLNGWCR---VRNLIEAARIWNDMIDQG---LKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 502 KRMKLCGYHPDSETYNIMV-DCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQ 560
MK G P+ +Y IM+ D C S ++A M+ G P YT LI
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 561 DEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+K + LL+ + G D +N ++ ++ + I M Q ++ P+ T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 621 CGYVFSAY 628
+ +Y
Sbjct: 476 FNMIMKSY 483
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 157/372 (42%), Gaps = 45/372 (12%)
Query: 291 TYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQL---DLAESFL 347
TY ++ Q D + L+ + +++ P ++ + + I S +L D+A+SF
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP---SVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 348 DRISEC-LSPHPY--NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL---FSLF 401
+ +C L P Y N L+ ++ A+++ + M + + PD TY +L F L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 402 GFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA---LGEERMIREL 458
G ++ +E + RDM + G+ ++ LL LG M L
Sbjct: 306 GMISGAWE----------------VIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNI 518
++ + G + +V+L L + + A+++F +MK G PD Y+I
Sbjct: 350 LK------DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 519 MVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDG 578
++ L + A L M + P + T+ AL+ L Q EA +LL+ G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 579 IQLDVLLFNT----FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFH 634
LD++L+N + + C + +++ ++++E + P+ T + Y +
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE----TGITPSVATFNSLIYGYCKTQNI 519
Query: 635 NTAIEALQVLSL 646
A + L V+ L
Sbjct: 520 AEARKILDVIKL 531
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 161/407 (39%), Gaps = 48/407 (11%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+S N +I+G + A +L M GV+P S TY+ + + V++
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 315 MQQENLKPLNSTLATLSVICSKA------LQLDLAESFLDRISECLSPHPYNALLASCNV 368
M + L P T L +C + + L L + L R E S P + +L+
Sbjct: 318 MLDKGLSPDVITYTIL--LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 369 LNQPERAVQVFAKMKQIKLLPDIRTYEL----LFSLFGFVNSPYEHSNML-------SQL 417
+ + A+ +F +MK L PD+ Y + L L F + + + M S+
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 418 HVAKRINAIERDM-----------ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAE 466
H A + ++ M ++G + +++ + I E +E F V
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 467 KLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSIL 526
+ + PS+AT +N +++ + Q A I +KL G P +Y ++D +
Sbjct: 496 ETGI--TPSVAT--FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 527 RSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL---------- 576
+ KS L M +G P TY+ + K L + K +E N + R R+
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-HENCNHVLRERIFEKCKQGLRD 610
Query: 577 ---DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+GI D + +NT ++ C + + + +E M + + T
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 657
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 466 EKLFVYGNPSLATDIYNVVLHHL-VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCS 524
E++ + G P L N+V+H + + +Q + + + K MKL G+ PD T+ +++
Sbjct: 107 EQMQILGIPPLLCTC-NIVMHCVCLSSQPCRASCFLGKMMKL-GFEPDLVTFTSLLNGYC 164
Query: 525 ILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVL 584
+ A L ++ GF P TYT LI+ L ++ N A+ L + +G + +V+
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 585 LFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+N + C R ++ M + ++ PN +T + A+V G
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 152/367 (41%), Gaps = 24/367 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+F +++G A L Q+ +G KP+ TY +I+ + + + M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 316 QQENLKPLNSTL-ATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQP 372
+P T A ++ +C D A D + + P+ + AL+ + + +
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
A +++ M Q+ + PD+ TY L + G M L A+++ + M
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLIN--GLC--------MYGLLDEARQMFYL---MER 321
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
NG + + L++ + + + + ++ FY + V N T Y V++
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN----TITYTVLIQGYCLVG 377
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVD--CCSILRSYKSASLLISMMIRQGFSPVTCT 550
+ +A +F +M PD TYN+++D CC+ + A ++ M ++ T
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN--GKVEKALMIFEYMRKREMDINIVT 435
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
YT +I+ + + K +A +L G++ +V+ + T + C + I + + + M
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 611 QEKVRPN 617
++ PN
Sbjct: 496 EDGFLPN 502
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 151/373 (40%), Gaps = 36/373 (9%)
Query: 291 TYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTL---ATLSVICSKALQLDLAESFL 347
+Y I++ F D L + M +PL S + LSVI +K + D+ S
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHS--RPLPSIIDFTRLLSVI-AKMNRYDVVISLF 106
Query: 348 DRISECLSPHPYNALLASCNVL-------NQPERAVQVFAKMKQIKLLPDIRTYELLFSL 400
+++ + L P LL +CN++ +QP RA KM ++ PD+ T+ L +
Sbjct: 107 EQM-QILGIPP---LLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN- 161
Query: 401 FGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIE 460
Y H N + A+ + G + + ++ L+ L + R + +E
Sbjct: 162 ------GYCHWNRIED------AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 461 YFYVAEKLFVYGN-PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIM 519
F ++ G+ P++ T YN ++ L E + A + + M P+ T+ +
Sbjct: 210 LF---NQMGTNGSRPNVVT--YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 520 VDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGI 579
+D + A L ++MI+ P TY +LI L +EA + +G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 580 QLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
+ +++ T + C +R++ I M Q+ V N +T + Y G + A E
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 640 ALQVLSLRMMSED 652
+S R D
Sbjct: 385 VFNQMSSRRAPPD 397
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 152/362 (41%), Gaps = 37/362 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N ++ AK + + ++ +M G+ T+ ++A + + +G+ ++M
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 254
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLAS-CNVLNQP 372
++ K T+ L +A A+ D++ E +P+ Y LL C V N
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRI--------- 423
E A +++ M L PDI + ++ L G + S + S+ + HV K
Sbjct: 315 E-AARIWNDMIDHGLKPDIVAHNVM--LEGLLRS-MKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 424 --------------NAIE--RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
AIE DM ++G+Q L+ G ++ + + E + ++
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE---LLKE 427
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ G+P YN ++ + + + I+ +M P T+N+++ + R
Sbjct: 428 MQEKGHPPDGK-TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
+Y+ + MI++G P +YT LI+ L+ + K EA LE G++ ++ +N
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
Query: 588 TF 589
F
Sbjct: 547 KF 548
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 120/308 (38%), Gaps = 26/308 (8%)
Query: 326 TLATLSVICSKALQLDLAESFLDRISE--CLSPHPYNALLASCNVLNQPERAVQVFAKMK 383
T ++ I +K Q + S L+ + L+ + + + + ++AV +F MK
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 384 QIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMK 443
+ K + T L G E + +L ER N ++
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK--------ERFTPN------MMTYT 301
Query: 444 NLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVVLHHLVEAQKGQIAINIF 501
LLN +R LIE + + +G L DI +NV+L L+ + K AI +F
Sbjct: 302 VLLNGWCR---VRNLIEAARIWNDMIDHG---LKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 502 KRMKLCGYHPDSETYNIMV-DCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQ 560
MK G P+ +Y IM+ D C S ++A M+ G P YT LI
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 561 DEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
+K + LL+ + G D +N ++ ++ + I M Q ++ P+ T
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 621 CGYVFSAY 628
+ +Y
Sbjct: 475 FNMIMKSY 482
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 178/473 (37%), Gaps = 79/473 (16%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S++ +IHG + A L QM G +PS+ TY +I+A + + M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFL-----DRISECLSPHPYNALLASCNVLN 370
KP T L + +++ A DRI S YNAL+
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP--SVITYNALINGYCKDG 385
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ A ++ M++ P++RT+ L V PY+ +H+ KR M
Sbjct: 386 RVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK------AVHLLKR-------M 432
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN-----PSLATDIYNVVL 485
+NG+ +S L++ L E + A KL N P T + ++
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCRE-------GHMNTAYKLLSSMNCFDIEPDCLT--FTAII 483
Query: 486 HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD-CCS------------------IL 526
+ + K +A M G D T ++D C IL
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 527 RSYKSASLLISMMIRQ----------------GFSPVTCTYTALIKILLQDEKFNEALNL 570
+ S ++++ M+ + G P TYT L+ L++ + +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 571 LERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVN 630
LE +L G +V + + C R++ E ++ M V PN VT + YVN
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 631 SGFHNTAIEALQVLSLRMMSEDGNILREK--RRFVDEFILAE---DSAAESDI 678
+G + A+E ++R M E G L ++ + F+L++ D++ ES +
Sbjct: 664 NGKLDRALE-----TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 23/320 (7%)
Query: 304 NFRDGLGVLKIMQQENLKPLNSTLATLSV--ICSKALQLDLAESFLDRISE--CL-SPHP 358
N RD L V +M +E NS ++ + +C +L+ A D++ E C S
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG-RLEEAFGLKDQMGEKGCQPSTRT 303
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
Y L+ + ++A +F +M P++ TY +L + L +
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLI-------------DGLCRDG 350
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT 478
+ N + R M + + S ++ L+N ++ + E V EK P++ T
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC--KPNVRT 408
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
+N ++ L K A+++ KRM G PD +YN+++D +A L+S
Sbjct: 409 --FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
M P T+TA+I + K + A L GI LD + T + C +
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 599 IDIIELIVEYMHQEKVRPNP 618
I+E + + ++ P
Sbjct: 527 TRDALFILETLVKMRILTTP 546
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 455 IRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSE 514
+R+ ++ F V K S++ Y++++H L E + + A + +M G P +
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVS---YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 515 TYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERT 574
TY +++ A L MI +G P TYT LI L +D K EA + +
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 575 RLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
D I V+ +N + C R+ ++ M + +PN T
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
P + T Y +++H LV + A+N+ ++ G PD+ YN+++ + A
Sbjct: 413 PDIVT--YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQA 593
LL S M+ + P Y LI ++ F+EA + + G+++DV+ N ++
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGF 530
Query: 594 CYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
C +D + M++E + P+ T + YV TAI+ + +
Sbjct: 531 CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 26/293 (8%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
YN ++ L E A VF ++K +P + T+ + + F +LS++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNAL---GEERMIRELIEYFYVAEKLFVYGNPS 475
ER G++ S + N+++A G + E I + + P
Sbjct: 303 --------ER-----GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND-----CKPD 344
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
+AT YN++++ L + K ++A+ G P++ +Y ++ + Y AS L
Sbjct: 345 VAT--YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ M +G P TY LI L+ ++A+N+ + G+ D ++N + C
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRM 648
R +L+ M + P+ + ++ SG + EA +V SL +
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD---EARKVFSLSV 512
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 134/353 (37%), Gaps = 77/353 (21%)
Query: 221 LAHQTISTGNKKVKIAKLDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQM 280
L ++ G K+V + LDE S++ + S+ +I K K Y +A KL++QM
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPN----NLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 281 KILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQL 340
G KP TY +I + D + N+K
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAV---------NMK------------------- 438
Query: 341 DLAESFLDRISECLSPHP--YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLF 398
+ I +SP YN L++ + A +F++M +LPD Y L
Sbjct: 439 ------VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 399 SLFGFVNS-PYEHSNMLSQLHVAKRI-------NAIERDMANNGVQHSHLSMKNLLNALG 450
GF+ S ++ + + L V K + NA+ + +G+ L+ N +N
Sbjct: 493 D--GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN--- 547
Query: 451 EERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYH 510
EE ++ P T Y+ ++ V+ Q AI IF+ M+
Sbjct: 548 EEHLV------------------PDKFT--YSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Query: 511 PDSETYNIMVD--CCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQD 561
P+ TY +++ CC +K A M + P TYT LI+ L ++
Sbjct: 588 PNVVTYTSLINGFCCQ--GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 152/362 (41%), Gaps = 37/362 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N ++ AK + + ++ +M G+ T+ ++A + + +G+ ++M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPH--PYNALLAS-CNVLNQP 372
++ K T+ L +A A+ D++ E +P+ Y LL C V N
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRIN-------- 424
E A +++ M L PDI + ++ L G + S + S+ + HV K
Sbjct: 316 E-AARIWNDMIDHGLKPDIVAHNVM--LEGLLRS-MKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 425 ---------------AIE--RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
AIE DM ++G+Q L+ G ++ + + E + ++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE---LLKE 428
Query: 468 LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+ G+P YN ++ + + + I+ +M P T+N+++ + R
Sbjct: 429 MQEKGHPPDGK-TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
+Y+ + MI++G P +YT LI+ L+ + K EA LE G++ ++ +N
Sbjct: 488 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
Query: 588 TF 589
F
Sbjct: 548 KF 549
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 124/318 (38%), Gaps = 26/318 (8%)
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE--CLSPHPYNALLASCNVLNQPE 373
+++ + T ++ I +K Q + S L+ + L+ + + + + +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK 246
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
+AV +F MK+ K + T L G E + +L ER N
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK--------ERFTPN- 297
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDI--YNVVLHHLVEA 491
++ LLN +R LIE + + +G L DI +NV+L L+ +
Sbjct: 298 -----MMTYTVLLNGWCR---VRNLIEAARIWNDMIDHG---LKPDIVAHNVMLEGLLRS 346
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMV-DCCSILRSYKSASLLISMMIRQGFSPVTCT 550
K AI +F MK G P+ +Y IM+ D C S ++A M+ G P
Sbjct: 347 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
YT LI +K + LL+ + G D +N ++ ++ + I M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 611 QEKVRPNPVTCGYVFSAY 628
Q ++ P+ T + +Y
Sbjct: 466 QNEIEPSIHTFNMIMKSY 483
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 20/260 (7%)
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
+A V +M + + P++ T+ +L F ++ N+ + V K +M +
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGF------WKDDNLPGSMKVFK-------EMLDQ 325
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQ 492
V+ + +S +L+N L I E I + +K+ G P+L T YN +++ +
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAIS---MRDKMVSAGVQPNLIT--YNALINGFCKND 380
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
+ A+++F +K G P + YN+++D L L M R+G P TY
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
LI L ++ A L ++ G+ D++ F+ + C K ++++ M +
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 613 KVRPNPVTCGYVFSAYVNSG 632
++P +T V Y G
Sbjct: 500 GLKPRHLTYNIVMKGYCKEG 519
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 165/392 (42%), Gaps = 37/392 (9%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQA---ASFQSNFRDGLGV 311
++FN VI+ K A+ ++ MK+ G P+ +Y+ +I V
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 312 LKIMQQENLKPLNSTLATLSVICSKALQLD----LAESFLDRISECLSPH--PYNALLAS 365
LK M + ++ P L T +++ + D + F + + + + P+ YN+L+
Sbjct: 284 LKEMVENDVSP---NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 366 CNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINA 425
+ A+ + KM + P++ TY L + F + E +M + K A
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV---KGQGA 397
Query: 426 IERDMANNGVQHSHLSMKNLLNALG-EERMIRELIEYFYVAEKLFVYGNPSLATDIYNVV 484
+ N + ++ + + + +E M RE I P + T YN +
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV-------------PDVGT--YNCL 442
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
+ L + A +F ++ G PD T++I+++ + A++L+ M + G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDG---IQLDVLLFNTFLRQACYKRRIDI 601
P TY ++K ++ A N+ RT+++ ++++V +N L+ K +++
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNM--RTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 602 IELIVEYMHQEKVRPNPVTCGYVFSAYVNSGF 633
+++ M ++ + PN +T V V+ GF
Sbjct: 560 ANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G + S LS K L+ AL +E + +EY Y E + P++ T +NVV++ L + K
Sbjct: 183 GYKLSALSCKPLMIALLKENRSAD-VEYVY-KEMIRRKIQPNVFT--FNVVINALCKTGK 238
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYK--SASLLISMMIRQGFSPVTCT 550
A ++ + MK+ G P+ +YN ++D C + + K A ++ M+ SP T
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
+ LI +D+ ++ + + ++ +V+ +N+ + C +I + + M
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNTAI-EALQVLS 645
V+PN +T ++A +N N + EAL +
Sbjct: 359 SAGVQPNLIT----YNALINGFCKNDMLKEALDMFG 390
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 186/439 (42%), Gaps = 69/439 (15%)
Query: 238 LDELSRRKHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQ 297
DE+ +R L ++N+++ + N+ A +L +M+ G K T ++Q
Sbjct: 46 FDEMPKRDDL--------AWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 298 AASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPH 357
S + F +G + + + L+ S +L V+ S+ +L+L+ + + + +
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD-RNLS 156
Query: 358 PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
+N++L+S L + A+ + +M+ L PDI T+ L S G+ +
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS--GYASKG---------- 204
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIR--ELIEYFYVAEKLF--VYGN 473
++K A+ + M G++ S S+ +LL A+ E ++ + I + + +L+ VY
Sbjct: 205 -LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVE 263
Query: 474 PSL---------------------ATDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYH 510
+L A +I +N ++ L A + A + RM+ G
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK 323
Query: 511 PDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNL 570
PD+ T+N + + L + A +I M +G +P ++TA+ ++ F AL +
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
Query: 571 LERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK------VRPNPVTCGYV 624
+ + +G+ + +T L+ I + +H K +R N + YV
Sbjct: 384 FIKMQEEGVGPNAATMSTLLK----------ILGCLSLLHSGKEVHGFCLRKNLICDAYV 433
Query: 625 FSA----YVNSGFHNTAIE 639
+A Y SG +AIE
Sbjct: 434 ATALVDMYGKSGDLQSAIE 452
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 138/324 (42%), Gaps = 40/324 (12%)
Query: 291 TYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRI 350
++ ++ S+ +D ++ M++E +KP T +L+ S L E LD I
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA---SGYATLGKPEKALDVI 349
Query: 351 SEC----LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV 404
+ ++P+ + A+ + C+ A++VF KM++ + P+ T L + G
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG-- 407
Query: 405 NSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYV 464
LS LH K ++ + N + ++++ L++ G+ ++ IE F+
Sbjct: 408 --------CLSLLHSGKEVHGF--CLRKNLICDAYVATA-LVDMYGKSGDLQSAIEIFWG 456
Query: 465 AEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCS 524
+ N SLA+ +N +L +G+ I F M G PD+ T+ ++ C
Sbjct: 457 IK------NKSLAS--WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 525 ----ILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQ 580
+ +K L+ S R G P + ++ +L + +EA + ++ L +
Sbjct: 509 NSGLVQEGWKYFDLMRS---RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSL---K 562
Query: 581 LDVLLFNTFLRQACYKRRIDIIEL 604
D ++ FL R +++ E+
Sbjct: 563 PDATIWGAFLSSCKIHRDLELAEI 586
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 160/403 (39%), Gaps = 35/403 (8%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
++ N +++ K+ + Q++ GV P TY+ +I A S + + ++
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 315 MQQENLKPLNSTLAT-LSVICSKALQLDLAESFLDRISECLSPH--PYNALLASCNVLNQ 371
M + P T T ++ +C E F + + LSP Y +LL
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFG----------FVNSPYEHS--------NM 413
+VF+ M+ ++PD+ + + SLF + NS E +
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 414 LSQLHVAKRINAIERDMANNGVQHSH----LSMKNLLNALGEERMIRELIEYFYVAEKLF 469
L Q + K + ++ ++ N +Q ++ +L+ L + +M+ E A+KLF
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE-------ADKLF 468
Query: 470 -VYGNPSLATDIYNVVLHHLVEAQKG--QIAINIFKRMKLCGYHPDSETYNIMVDCCSIL 526
+L D Y + + + G Q A+ +F++MK D TYN ++D +
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 527 RSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLF 586
+A + + M+ + P +Y+ L+ L EA + + I+ V++
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 587 NTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYV 629
N+ ++ C E +E M E P+ ++ + +V
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 482 NVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIR 541
N++++ L + K + +++ G +PD TYN ++ S + A L++ M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 542 QGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDI 601
+GFSP TY +I L + K+ A + G+ D + + L +AC K +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 602 IELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAI 638
E + M V P+ V + S + SG + A+
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T +N++ + + + ++M+ G+ PD TYN +V K A L
Sbjct: 236 TYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK 295
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
+M R+ P TYT+LIK L +D + EA R GI+ D + +NT + C +
Sbjct: 296 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG 355
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSED 652
+ + ++ M V P+ TC + +V G +A+ V+ LR + D
Sbjct: 356 MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF--VVELRRLKVD 408
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 179/449 (39%), Gaps = 36/449 (8%)
Query: 175 PTMLDFMGDKQLDSCIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTGNKKVK 234
PT++ F + LDSC + D I ++ R+ ++ + + + G K
Sbjct: 236 PTVITF--NTMLDSCFKAGDLERVDKIWLEMK------RRNIEFSEVTYNILINGFSKN- 286
Query: 235 IAKLDELSRRKHLQLMK----VLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSC 290
K++E +RR H + + V +SFN +I G K+ + A + +M G+ P++
Sbjct: 287 -GKMEE-ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 291 TYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRI 350
TY+ I A D +L M ++ N TL + K ++ L F D
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYN-TLMHGYIKMGKFVEASLL--FDDLR 401
Query: 351 SECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPY 408
+ + P YN L+ E A ++ +M + PD+ TY L GFV +
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK--GFVKN-- 457
Query: 409 EHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL 468
L +A + +M G++ + A+GE R+ + + F + E++
Sbjct: 458 ------GNLSMATEVYD---EMLRKGIKPDGYAYTT--RAVGELRL-GDSDKAFRLHEEM 505
Query: 469 FVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS 528
+ + IYNV + L + AI +++ G PD TY ++
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 529 YKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNT 588
+K A L M+R+ P TY LI + + +A + G++ +V+ N
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPN 617
L C ID + M +E + PN
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 34/298 (11%)
Query: 354 LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHS 411
+SP+ +N ++ + L +RA++VF M + K LPD Y +
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPD----------------GYTYC 226
Query: 412 NMLSQLHVAKRINA---IERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKL 468
++ L +RI+ + +M + G S + L++ L ++ +L + + +
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG---DLTRVTKLVDNM 283
Query: 469 FVYGN-PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
F+ G P+ T YN ++H L K A+++ +RM P+ TY +++ R
Sbjct: 284 FLKGCVPNEVT--YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFN 587
A L+S M +G+ Y+ LI L ++ K EA++L + G + ++++++
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 588 TFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAI--EALQV 643
+ C + + + + I+ M PN Y +S+ + GF T + EA+QV
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPN----AYTYSSLMK-GFFKTGLCEEAVQV 454
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 17/262 (6%)
Query: 392 RTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGE 451
R++ ++F +G + P K ++ R + + S S ++LN +
Sbjct: 113 RSFIVVFRAYGKAHLP------------DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIIN 160
Query: 452 ERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP 511
E + +E++ + N S +N+V+ L + + AI +F+ M P
Sbjct: 161 EGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP 220
Query: 512 DSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLL 571
D TY ++D A LL+ M +G SP Y LI L + L+
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV 280
Query: 572 ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNS 631
+ L G + + +NT + C K ++D ++E M K PN VT G + + V
Sbjct: 281 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK- 339
Query: 632 GFHNTAIEALQVLSLRMMSEDG 653
A +A+++LS M E G
Sbjct: 340 --QRRATDAVRLLS--SMEERG 357
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 171/422 (40%), Gaps = 48/422 (11%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
+++ ++ G KE+ A L+ +M+ G PS Y+ +I + + ++
Sbjct: 223 YTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN 282
Query: 315 MQQENLKPLNSTLATL-SVICSKALQLDLAESFLDRI--SECLSPH-PYNALLASCNVLN 370
M + P T TL +C K +LD A S L+R+ S+C+ Y L+
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKG-KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ AV++ + M++ R Y L ++ + S L + A+ ++ R M
Sbjct: 342 RATDAVRLLSSMEE-------RGYHLNQHIYSVLISG------LFKEGKAEEAMSLWRKM 388
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN-PSLATDIYNVVLHHLV 489
A G + + + L++ L E E E + ++ G P+ T Y+ ++
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKE---ILNRMIASGCLPNAYT--YSSLMKGFF 443
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ + A+ ++K M G + Y++++D + K A ++ S M+ G P T
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLD---GIQLDVLLFNTFLRQACYKRRIDIIELIV 606
Y+++IK L + AL L Q DV+ +N L C ++ I ++
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 607 EYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKRRFVDEF 666
M P+ +TC + F NT +SE N + R F++E
Sbjct: 564 NSMLDRGCDPDVITC---------NTFLNT------------LSEKSNSCDKGRSFLEEL 602
Query: 667 IL 668
++
Sbjct: 603 VV 604
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 158/404 (39%), Gaps = 28/404 (6%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVL-KIMQQENLKPLNSTLATLS 331
A + + M GV P S ++ +I + D + ++ M + P L L
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 332 VICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDI 391
K +L A S L + YN +++ + A Q ++M ++ +LPD
Sbjct: 137 HSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDT 196
Query: 392 RTYELLFSLF----GFVNSP-----------YEHSNMLSQLHVAKRINAIERDMANNGVQ 436
+Y L F FV + H+ +LS + I RDM +G
Sbjct: 197 VSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFD 256
Query: 437 HSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQI 496
++ +++N L + + E E++ VY P+ T Y ++ L +A +
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY--PNHVT--YTTLVDSLFKANIYRH 312
Query: 497 AINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIK 556
A+ ++ +M + G D Y +++D + A M++ P TYTAL+
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 557 ILLQDEKFNEA----LNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
L + + A +LE++ + + + N ++++ + + ++ M +
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL----RKMEDQ 428
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNIL 656
V PN T G V +G AIE + + L + E+ IL
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 130/315 (41%), Gaps = 45/315 (14%)
Query: 313 KIMQQENLKPLNSTLATLSVICSKALQLDLAESFL---DRISEC-LSPHPYNALLASCNV 368
K M+++ ++P +AT +++ + + +E L D++ C + P L SCN+
Sbjct: 562 KGMREKGIEP---DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPS-----LMSCNI 613
Query: 369 L-------NQPERAVQVFAKMKQIKLLPDIRTYELLFSL-------------------FG 402
+ + E A+ + +M +++ P++ TY + +G
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 673
Query: 403 FVNSPYEHSNMLS---QLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELI 459
S ++ +++ +L + K+ + DM G ++ +L++ +R+ +
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 460 EYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIM 519
+ V + + +P++AT YN ++ L +A + MK G PD TYN +
Sbjct: 734 STYSVMMEAGI--SPNVAT--YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 789
Query: 520 VDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGI 579
+ + + + K + + MI G P T TY LI K +A LL+ G+
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 580 QLDVLLFNTFLRQAC 594
+ + T + C
Sbjct: 850 SPNTSTYCTMISGLC 864
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 24/305 (7%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
YNA++ +NQ ++A ++F + +L PD T + + +N + SN+L
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL---- 461
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT 478
+RI + +++ Q L + EE+ L + FY+ L G+ S++
Sbjct: 462 --ERIGELGYPVSDYLTQFFKLLCAD------EEKNAMAL-DVFYI---LKTKGHGSVS- 508
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS-YKSASLLIS 537
+YN+++ L + Q ++++F M+ G+ PDS +Y+I + CC + + K+A
Sbjct: 509 -VYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI-CCFVEKGDVKAACSFHE 566
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLR--QACY 595
+I P Y +L K L Q + + A+ LL R L ++ + F L C
Sbjct: 567 KIIEMSCVPSIAAYLSLTKGLCQIGEID-AVMLLVRECLGNVESGPMEFKYALTVCHVCK 625
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR-MMSEDGN 654
+ + +V+ M+QE V N V + S G A E L R +M+E
Sbjct: 626 GSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADM 685
Query: 655 ILREK 659
++ E+
Sbjct: 686 VVYEE 690
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 151/376 (40%), Gaps = 35/376 (9%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
W++N + K + LA ++ MK GV P++ ++ +SF + +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLV--SSFAEKGKLHFATALL 161
Query: 315 MQQENLKP----LNSTLATLSVICSKALQLDLAESFLD------RISECLSPHPYNALLA 364
+Q ++ +NS L TL ++LD E + R C +N L+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTL-------VKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 365 SCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRIN 424
+ + E+A+++ M PDI TY L F N + S M + K +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV---KSGS 271
Query: 425 AIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVV 484
D+ ++ SM + G+ R L++ +L +Y P+ T +NV+
Sbjct: 272 VCSPDVV------TYTSMISGYCKAGKMREASSLLDDML---RLGIY--PTNVT--FNVL 318
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
+ +A + A I +M G PD T+ ++D + L M +G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
P TY+ LI L + + +A LL + I ++N + C +++ +
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 605 IVEYMHQEKVRPNPVT 620
IVE M ++K +P+ +T
Sbjct: 439 IVEEMEKKKCKPDKIT 454
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 151/376 (40%), Gaps = 35/376 (9%)
Query: 255 WSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKI 314
W++N + K + LA ++ MK GV P++ ++ +SF + +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLV--SSFAEKGKLHFATALL 161
Query: 315 MQQENLKP----LNSTLATLSVICSKALQLDLAESFLD------RISECLSPHPYNALLA 364
+Q ++ +NS L TL ++LD E + R C +N L+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTL-------VKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 365 SCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRIN 424
+ + E+A+++ M PDI TY L F N + S M + K +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV---KSGS 271
Query: 425 AIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVV 484
D+ ++ SM + G+ R L++ +L +Y P+ T +NV+
Sbjct: 272 VCSPDVV------TYTSMISGYCKAGKMREASSLLDDML---RLGIY--PTNVT--FNVL 318
Query: 485 LHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
+ +A + A I +M G PD T+ ++D + L M +G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIEL 604
P TY+ LI L + + +A LL + I ++N + C +++ +
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 605 IVEYMHQEKVRPNPVT 620
IVE M ++K +P+ +T
Sbjct: 439 IVEEMEKKKCKPDKIT 454
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 158/380 (41%), Gaps = 21/380 (5%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
S+N+V+ G ++KN LA+ + + G+KP++ TY +I + ++ L V+ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE----CLSPHPYNALLASCNVLNQ 371
N++ T+ K Q A L + E C+S YN+++ +
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+ AV + +M + P++ TY L +N +++ M L + +M
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSL------MNGLCKNNRMDQALE-------MRDEMK 646
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEA 491
N GV+ + L++ + + F +E L NPS IYN ++
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALF--SELLEEGLNPS--QPIYNSLISGFRNL 702
Query: 492 QKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTY 551
A++++K+M G D TY ++D + AS L + M G P Y
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 552 TALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
T ++ L + +F + + + E + + + +VL++N + + +D + + M
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 612 EKVRPNPVTCGYVFSAYVNS 631
+ + P+ T + S V +
Sbjct: 823 KGILPDGATFDILVSGQVGN 842
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 475 SLATDIYNVVLHHLVEA----QKGQIAINIFKRMKLCGYHPDSETYNIMVD-CCSILRSY 529
++ D NV L+ A +K A+ + R G PDS Y++ V CC L
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 530 KSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTF 589
+ SLL M ++ P TYT++I ++ ++A+ L + DGI ++V+ +
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 590 LRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE---ALQVLSL 646
+ C + ++ + M +E PN VT + + +G A+E ++VL L
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 302 QSNFRDGLGVLKIMQQENLKPLNSTLAT----LSVICSKALQLDLAESFLDRISECLSPH 357
Q NFR G I+ + +S+++ L+++ + L+ D + + S C +
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET-- 172
Query: 358 PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQL 417
+ + A + ++ + PD TY L +H L
Sbjct: 173 ------------GRVDEAKDLMKELTEKHSPPDTYTYNFLL----------KHLCKCKDL 210
Query: 418 HVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
HV RD + V+ +S L++ + + +RE + Y+ KL GN
Sbjct: 211 HVVYEFVDEMRD--DFDVKPDLVSFTILIDNVCNSKNLREAM---YLVSKL---GNAGFK 262
Query: 478 TD--IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
D +YN ++ KG A+ ++K+MK G PD TYN ++ S + A +
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 536 ISMMIRQGFSPVTCTYTALI 555
+ M+ G+ P T TYT+L+
Sbjct: 323 LKTMVDAGYEPDTATYTSLM 342
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 74/339 (21%)
Query: 286 KPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL-SVICSKALQLDLAE 344
KP +CTY+ +I S F D L + M ++ +KP T TL +C +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDS------- 201
Query: 345 SFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV 404
R+ E L + +L V +P V ++A + IK L I EL F+ F
Sbjct: 202 ----RVKEALKMK--HDMLKVYGV--RP--TVHIYASL--IKALCQIG--ELSFA-FKLK 246
Query: 405 NSPYE---------HSNMLSQLHVAKRINAIE---RDMANNGVQHSHLSMKNLLNALGEE 452
+ YE +S ++S L A R N + +M+ G + ++ L+N
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING---- 302
Query: 453 RMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPD 512
F N S + N VL +VE G PD
Sbjct: 303 ----------------FCVENDSESA---NRVLDEMVEK----------------GLKPD 327
Query: 513 SETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLE 572
+YN+++ ++ ++ A+ L M R+G SP T +Y + L + +F EA +L+
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 573 RTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQ 611
G + FL++ C +++I+ ++ +H+
Sbjct: 388 EMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR 426
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
YN L+ C+ + A+++F +M + K+ P T+ L + L +
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI-------------HGLCKDS 201
Query: 419 VAKRINAIERDMAN-NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
K ++ DM GV+ + +L+ AL + I EL F + ++ + G +
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQ---IGELSFAFKLKDEAY-EGKIKVD 257
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
IY+ ++ L++A + I + M G PD+ TYN++++ + +SA+ ++
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLD 317
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
M+ +G P +Y ++ + + +K+ EA L E G D L + C
Sbjct: 318 EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGL 377
Query: 598 RIDIIELIVEYMHQEKVRP 616
+ + +I++ M + +P
Sbjct: 378 QFEEAAVILDEMLFKGYKP 396
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRS--YKSASLLIS 537
IYN ++ L + A N+F M G PD TY+ M+D S RS + A L+
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID--SFCRSGRWTDAEQLLR 135
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
MI + +P T++ALI L+++ K +EA + GI + +N+ + C +
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNS 631
R++ + +++ M + P+ VT + + Y +
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 123/307 (40%), Gaps = 20/307 (6%)
Query: 315 MQQENLKPLNSTLATL-SVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPE 373
M + +P T TL + +C + L A + +DR+ E PY ++ + E
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQ-ALALVDRMVE-EGHQPYGTIINGLCKMGDTE 58
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANN 433
A+ + +KM++ + + Y + N+ +++H + + +
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV---ITYS 115
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G+ S +A E+++R++IE NP + T ++ +++ LV+ K
Sbjct: 116 GMIDSFCRSGRWTDA---EQLLRDMIERQI---------NPDVVT--FSALINALVKEGK 161
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
A I+ M G P + TYN M+D A ++ M + SP T++
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
LI + ++ + + + GI + + + T + C +D + ++ M
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 614 VRPNPVT 620
V PN +T
Sbjct: 282 VAPNYIT 288
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 22/304 (7%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
+++++V MK G+ + + ++ + S RD L VL +MQ+ ++P T
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285
Query: 333 ICSKALQLDLAESFLDRISEC-LSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLP 389
+ +A +L+ A FL+R+ + P+ YN ++ L++ E A+++ M LP
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345
Query: 390 DIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNAL 449
D +Y +++ G+ + + + + + +++ +G+ ++ L++ L
Sbjct: 346 DKVSY---YTIMGY---------LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
Query: 450 GEERMIRELIEYFYVA-EKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCG 508
+ E + + A EK F Y+ ++H L + + A ++ M G
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLG-----YSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 509 Y-HPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEA 567
+ PD TY +V+ L A L+ +M G P T +YTAL+ + + K EA
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 568 LNLL 571
++
Sbjct: 509 REMM 512
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 466 EKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETY-NIMVDCC 523
E++ V G P++ T YN ++ + + + AI + + M G PD +Y IM C
Sbjct: 301 ERMQVVGIVPNVVT--YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
R + L+ M G P TY LI +L + + +EAL L+ + G ++D
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Query: 584 LLFNTFLRQACYKRRI-DIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
L ++ + C + R+ + +LI E + + P+ VT V + + G + A + LQ
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 643 VL 644
V+
Sbjct: 479 VM 480
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 162/384 (42%), Gaps = 26/384 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++N +I G A +L+ M G P +Y I+ + + ++K M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 316 QQEN-LKPLNSTLATLSVICSKALQLDLAESFLDRISEC---LSPHPYNALL-ASCNVLN 370
+E+ L P T TL + +K D A FL E + Y+A++ A C
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 371 QPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
E + + + PD+ TY + + GF L ++ AK++ + M
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVN--GFCR--------LGEVDKAKKLLQV---M 480
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVE 490
+G + + +S LLN + E E ++E+ + +P+ T Y+V++H L
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH--WWSPNSIT--YSVIMHGLRR 536
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDC-CSILRSYKSASLLISMMIRQGFSPVTC 549
K A ++ + M L G+ P N+++ C R+++ A + + +G +
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE-ARKFMEECLNKGCAINVV 595
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI-DIIELIVEY 608
+T +I Q+++ + AL++L+ L DV + T + K RI + EL+ +
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSG 632
+H+ + P PVT V Y G
Sbjct: 656 LHK-GIDPTPVTYRTVIHRYCQMG 678
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 442 MKNLLNALGEERMI---------RELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQ 492
M+NLL +L ++ R +++FY A++ + Y + + +Y +L L + +
Sbjct: 165 MRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPM---VYYSMLEVLSKTK 221
Query: 493 KGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYT 552
Q + + MK G + E ++ ++ S + A ++++M R G P
Sbjct: 222 LCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICN 281
Query: 553 ALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE 612
I + ++ + +AL LER ++ GI +V+ +N +R C R++ ++E MH +
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK 341
Query: 613 KVRPNPVT 620
P+ V+
Sbjct: 342 GCLPDKVS 349
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 118/313 (37%), Gaps = 55/313 (17%)
Query: 355 SPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNML 414
SPHPYN ++ + Q + A + MK R E+ F + Y + +
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKS-------RNVEISIETFTILIRRYVRAGLA 202
Query: 415 SQ-LHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN 473
S+ +H R M + G ++ +++ L +R E +F + F
Sbjct: 203 SEAVHCFNR-------MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF---E 252
Query: 474 PSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVD----CCSILRSY 529
P + +Y ++ A + A +FK MKL G P+ TY+I++D C I R++
Sbjct: 253 PDVI--VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 530 KS-ASLLIS------------------------------MMIRQGFSPVTCTYTALIKIL 558
A +L S M + G P T TY LI+
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 559 LQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNP 618
+DE A+ +L +++ FNT R KR ++ + M + K PN
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 619 VTCGYVFSAYVNS 631
VT + +V S
Sbjct: 431 VTYNILMRMFVGS 443
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
+N VL +A + AI IFK M G P +Y ++ + Y A + + MI
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
+ G P YT + +L +KFN LL+ GI+ V+ FN + C + +
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVI-SGCARNGLS 579
Query: 601 IIELIVEYMHQ---EKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
+ E+ H+ E V PN +T + A N A E
Sbjct: 580 GV--AYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYE 619
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 142/377 (37%), Gaps = 67/377 (17%)
Query: 284 GVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQ-ENLKPLNSTLATLSVICSKALQLDL 342
G+KP+ Y +I L+ M+ + KP T L C K + DL
Sbjct: 174 GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDL 233
Query: 343 AESFLDRISEC---LSPHPYNALLASCNVLNQPERAVQVFAKM-KQIKLLPDIRTYELLF 398
+S + +S S YN ++ E V A M + LPD+ T +
Sbjct: 234 VKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII 293
Query: 399 SLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIREL 458
+G + + + S+ + GVQ + L+ + G+ M +++
Sbjct: 294 GSYGNGRNMRKMESWYSRFQLM-------------GVQPDITTFNILILSFGKAGMYKKM 340
Query: 459 IEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNI 518
EK F SL T YN+V+ +A + + ++F++MK G P+S TY
Sbjct: 341 CSVMDFMEKRFF----SLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITY-- 394
Query: 519 MVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDG 578
CS++ +Y A L++ + D + +N
Sbjct: 395 ----CSLVNAYSKAGLVVKI----------------------DSVLRQIVN-------SD 421
Query: 579 IQLDVLLFNTFLRQACYKRRIDII---ELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHN 635
+ LD FN + Y + D+ EL ++ M + K +P+ +T + Y G
Sbjct: 422 VVLDTPFFNCIIN--AYGQAGDLATMKELYIQ-MEERKCKPDKITFATMIKTYTAHGI-- 476
Query: 636 TAIEALQVLSLRMMSED 652
+A+Q L +M+S D
Sbjct: 477 --FDAVQELEKQMISSD 491
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 485 LHHLVEAQKGQIAINIFKRM-KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQG 543
L ++ + Q A+ IF + K Y P +TY + + ASLL +M+ +G
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLLERTR-LDGIQLDVLLFNTFLRQACYKRRIDII 602
P YT+LI + + E ++A + LE + + + DV F + C R D++
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 603 ELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNIL 656
+ IV M V + VT + Y +G E ++ + L M EDG+ L
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM----FEEMESV-LADMIEDGDSL 283
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 441 SMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINI 500
S+ L+ LGEE ++E + FY ++ + P + YN +++ L + A +
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEY--HCKPDVYA--YNTIINALCRVGNFKKARFL 222
Query: 501 FKRMKLCG--YHPDSETYNIMVDC---------C--SILRSYKSASLLISMMIRQGFSPV 547
+M+L G Y PD+ TY I++ C +I R A+ + M+ +GF P
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 548 TCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVE 607
TY LI + + AL L E + G + + +N+F+R Y + IE +E
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIR---YYSVTNEIEGAIE 339
Query: 608 YMHQEK 613
M K
Sbjct: 340 MMRTMK 345
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 154/378 (40%), Gaps = 52/378 (13%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
N ++ K +N A+ L++ LGV P TY+ +I+ + + V + M+
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALLASCNVLNQPERAV 376
+ ++P +T +L +K L L+ R +
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLN--------------------------------RVL 103
Query: 377 QVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ-LHVAKRINAIERDMANNGV 435
Q+F +M L PD+ +Y L S + + E +L + +H+A + I+
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGID-------- 155
Query: 436 QHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQ 495
+ LL+AL + IE F + L P L T YN++++ L ++++
Sbjct: 156 -----TYNILLDALCKSGHTDNAIELF---KHLKSRVKPELMT--YNILINGLCKSRRVG 205
Query: 496 IAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALI 555
+ + +K GY P++ TY M+ + + L M ++G++ A++
Sbjct: 206 SVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVV 265
Query: 556 KILLQDEKFNEALNLL-ERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKV 614
L++ + EA + E R D++ +NT L +D ++ ++E + + +
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Query: 615 RPNPVTCGYVFSAYVNSG 632
+P+ T + + +N G
Sbjct: 326 KPDDYTHTIIVNGLLNIG 343
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 159/424 (37%), Gaps = 58/424 (13%)
Query: 286 KPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAES 345
+PS Y IQAA S+ GL + M+ + + P L K +++ AE
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 346 FLDR-ISECLSPH--PYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYE-LLFSLF 401
D ++ L P YN L+ PE++ +V +MK + P + T+ LL LF
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 402 ------------------GFVNSPYEHSNMLSQLHVAKRINA---IERDMANNGVQHSHL 440
GFV + S + ++ A + ++GV+ +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 441 SMKNLLNAL--------GEERMIRELIEYFYVAE---------------------KLFVY 471
+ LLNAL EE + RE+ + E K+
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 472 GNPSLATD--IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSY 529
+ D YN ++ E + + A +MKL G P ETYNI++ +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 530 KSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLD-GIQLDVLLFNT 588
++ M G P +Y LI L + K EA +++R D G+ V ++N
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNM 534
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRM 648
+ C K +I+ + M ++ + N VT + +G + A + L +S +
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 649 MSED 652
+ D
Sbjct: 595 LKPD 598
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 127/316 (40%), Gaps = 50/316 (15%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLH 418
Y + + L+ + +++F +MK ++ P + Y +L + L
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVL----------------IDGLC 225
Query: 419 VAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLAT 478
KR+N E+ L + + R++ LI Y + + GNP +
Sbjct: 226 KGKRMNDAEQ----------------LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 479 DI---------------YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
+ +N +L L +A + A N+ K MK G+ PD+ T++I+ D
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
S ++A + + G T + L+ L ++ K +A +L R G+ +
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQV 643
+++NT + C K + + +E M ++ ++P+ + + + G A + +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 644 LSLRMMS---EDGNIL 656
+ L+ +S E NIL
Sbjct: 450 MKLKGVSPSVETYNIL 465
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 152/386 (39%), Gaps = 24/386 (6%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+FN ++ G K A+ ++ +MK LG P + T+ + S LGV +
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDR-ISECLSPHP--YNALL-ASCNVLNQ 371
+K T + L K +++ AE L R +++ L P+ YN ++ C +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMA 431
+++ A KQ + PD Y L F + + K +N M
Sbjct: 406 VGARMKIEAMEKQ-GMKPDHLAYNCLIRRF---------CELGEMENAEKEVNK----MK 451
Query: 432 NNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN-PSLATDIYNVVLHHLVE 490
GV S + L+ G + E + F + +++ G P++ + Y +++ L +
Sbjct: 452 LKGVSPSVETYNILIGGYGRKY---EFDKCFDILKEMEDNGTMPNVVS--YGTLINCLCK 506
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCT 550
K A + + M+ G P YN+++D C + A M+++G T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 551 YTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMH 610
Y LI L K +EA +LL G++ DV +N+ + + + + E M
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 611 QEKVRPNPVTCGYVFSAYVNSGFHNT 636
+ ++P T + S G T
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELT 652
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 119/545 (21%), Positives = 205/545 (37%), Gaps = 121/545 (22%)
Query: 110 HHSKSIIALHKFIWTFIRLGDLKSAYEALQQMVSLPMTGNIAGTVYGKFYSTILDIPVPS 169
H S+I + + + G ++ A L++M L G V F +IL S
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL-------GFVPDAFTFSILFDGYSS 331
Query: 170 NKKLGPTMLDFMGDKQLDSCIHPSIMYLPDAISASIEKGQPGVRKGVQPLGLAHQTISTG 229
N+K + + + +DS + + ++A ++G+ + K + LG
Sbjct: 332 NEKAEAALGVY--ETAVDSGVKMNAYTCSILLNALCKEGK--IEKAEEILGREMAKGLVP 387
Query: 230 NKKVKIAKLDELSRRKHL------------QLMKVLRWSFNDVIHGCAKEKNYMLAKKLI 277
N+ + +D R+ L Q MK ++N +I + A+K +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 278 VQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATL-SVIC-- 334
+MK+ GV PS TY+ +I + F +LK M+ P + TL + +C
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 335 SKALQLDLAESFL-DR------------ISECLSPH----------------------PY 359
SK L+ + + + DR I C S Y
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 360 NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHV 419
N L+ ++ + A + ++ + L PD+ TY L S +GF +
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN------------- 614
Query: 420 AKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATD 479
+R A+ +M +G++ + L +LL +L +E IE + E+LF G SL D
Sbjct: 615 VQRCIALYEEMKRSGIKPT-LKTYHLLISL----CTKEGIE---LTERLF--GEMSLKPD 664
Query: 480 --IYNVVLHHLVEAQKGQIAINIFKRM-----------------------KLCGY----- 509
+YN VLH + A N+ K+M KLC
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID 724
Query: 510 -------HPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDE 562
P+++TYNI+V ++ Y SA + M +GF C L+ L ++
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEW 784
Query: 563 KFNEA 567
+ EA
Sbjct: 785 RSKEA 789
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 357 HPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNS-PYEHSNMLS 415
H +++L+++C E+A +F +M P+ + + +L L V + Y+ + L
Sbjct: 410 HTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL--LHACVEACQYDRAFRLF 467
Query: 416 QLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYV-AEKLFVYGNP 474
Q +N E A++ V S N+L G ++ Y+ A K F + P
Sbjct: 468 QSWKGSSVN--ESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCF-KP 524
Query: 475 SLATDIYNVVLHHL-VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSAS 533
+ AT YN++L + +G+ + MK G P+ T++ ++D C + A
Sbjct: 525 TTAT--YNILLKACGTDYYRGK---ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV 579
Query: 534 LLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLR-Q 592
++ M G P YT IKI +++ A +L E R I+ + + +NT L+ +
Sbjct: 580 RILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKAR 639
Query: 593 ACYKRRIDIIELIVEY--MHQEKVRPN 617
+ Y +++ + + Y M +PN
Sbjct: 640 SKYGSLLEVRQCLAIYQDMRNAGYKPN 666
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 153/364 (42%), Gaps = 43/364 (11%)
Query: 293 DGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISE 352
+G+++ F S + D ++M L P L C K E LD ++
Sbjct: 172 NGLVRRRRFDSVWVD----YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 353 CLSPHPYNALLASCNVL-----NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSP 407
L P N + + +L N+ E A ++F MK+ +LP++ TY + + +
Sbjct: 228 -LGIKP-NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 408 YEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEK 467
+ + ++ VA+ + + + L++ + R EL+ A
Sbjct: 286 RQAYGLYKEILVAELLPNV-------------VVFGTLVDGFCKAR---ELV----TARS 325
Query: 468 LFV----YG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC 522
LFV +G +P+L +YN ++H ++ A+ + M+ PD TY I+++
Sbjct: 326 LFVHMVKFGVDPNLY--VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
I A+ L M + P + TY +LI ++ +AL+L G++ +
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 583 VLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAI-EAL 641
++ F+T + C R I + M + + P+ VT ++A +++ F + EAL
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT----YTALIDAHFKEANMKEAL 499
Query: 642 QVLS 645
++ S
Sbjct: 500 RLYS 503
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 24/305 (7%)
Query: 273 AKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQENLKPLNSTLATLSV 332
A+K+ MK GV P+ TY +I N R G+ K + L P TL
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 333 ICSKALQLDLAES-FLDRISECLSP--HPYNALL-ASCNVLNQPERAVQVFAKMKQIKLL 388
KA +L A S F+ + + P + YN L+ C N E AV + ++M+ + L
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE-AVGLLSEMESLNLS 371
Query: 389 PDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNA 448
PD+ TY +L N L N + + M N + S + +L++
Sbjct: 372 PDVFTYTILI-------------NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 449 LGEERMIRELIEYFYVAEKLFVYG-NPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLC 507
+E + + ++ + ++ G P++ T ++ ++ + + A+ ++ M +
Sbjct: 419 YCKEYNMEQALD---LCSEMTASGVEPNIIT--FSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 508 GYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEA 567
G PD TY ++D + K A L S M+ G P T+ L+ ++ + + A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 568 LNLLE 572
++ +
Sbjct: 534 IDFYQ 538
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 474 PSLATDIYNVVLHHL-VEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSA 532
PSL + Y +L + V+ Q G I+ +I ++ G DS +N +++ S + + A
Sbjct: 78 PSLIS--YTTLLAAMTVQKQYGSIS-SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 533 SLLISMMIRQGFSPVTCTYTALIK---ILLQDEKFNEALNL-LERTRLDGIQLDVLLFNT 588
+ M G +P T TY LIK I + E+ +E L+L LE +D + ++ FN
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD-VGPNIRTFNV 193
Query: 589 FLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
++ C K++++ +V+ M + VRP+ VT + + YV G
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 172/410 (41%), Gaps = 30/410 (7%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
FN VI+ ++ N A + +++MK LG+ P++ TY+ +I+ +L +M
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 317 QENLKPLNSTLATLSVICS---KALQLDLAESFLDRISEC-LSPH--PYNALLASCNVL- 369
+E + + T +V+ K +++ A + ++ EC + P YN +A+C V
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT-IATCYVQK 236
Query: 370 NQPERA-VQVFAKM-KQIKLLPDIRTYELLFSLF---GFVNSPYEHSNMLSQLHVAKR-- 422
+ RA +V KM + K P+ RT ++ + G V + ++ V
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 423 -----INAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLA 477
IN M +G+ L++ LL + EE + + + L + ++
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVTLTL--LLMSFNEE--VELVGNQKMKVQVLTLMKECNVK 352
Query: 478 TDI--YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
D+ Y+ V++ A + A +FK M G PD+ Y+I+ + K A L
Sbjct: 353 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 412
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ +I + P +T +I + ++A+ + + G+ ++ F T +
Sbjct: 413 LETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 471
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGF---HNTAIEALQ 642
++ E +++ M V+P T + A+ +G N AI AL+
Sbjct: 472 VKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 508 GYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEA 567
G + D +Y+I++D S + + A L+ MI++G P TYTA+I+ L + K EA
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 568 LNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSA 627
L R GI++D L+ T + C K ++ ++ M Q ++P+ +T V +
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 628 YVNSG 632
+G
Sbjct: 392 LCMAG 396
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
YN++L + + + A+ F+ MK G PD T+N M++ + A L M
Sbjct: 258 YNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMK 317
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
P +YT +IK L ++ ++ L + E R GI+ + ++T L C ++
Sbjct: 318 GNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 601 IIELIVEYMHQEKVRP 616
+ I++ M + + P
Sbjct: 378 EAKNILKNMMAKHIAP 393
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%)
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
D++ V++ +A Q ++ IF++MK G ++YN + Y A +
Sbjct: 186 DMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK 245
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
M+ +G P TY ++ + AL E + GI D FNT + C ++
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSAYV 629
+D E + M K+ P+ V+ + Y+
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL 336
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 10/238 (4%)
Query: 410 HSNMLSQLHVAKRIN---AIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAE 466
H M+ L ++N I DM GV L+ + G+ +++E ++ F +
Sbjct: 153 HMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK 212
Query: 467 KLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSIL 526
L V YN + ++ + +A F +M G P TYN+M+ +
Sbjct: 213 DLGV----ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 527 RSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLF 586
++A M +G SP T+ +I + +K +EA L + + I V+ +
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 587 NTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
T ++ R+D I E M + PN T + ++G +EA +L
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG---KMVEAKNIL 383
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 441 SMKNLLNALGEERMIRELIEYFY-VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAIN 499
S LL+A + + E ++ F + EKL + P L T YN ++ L ++
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGI--TPDLVT--YNTMIKALCRKGSMDDILS 214
Query: 500 IFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILL 559
IF+ ++ G+ PD ++N +++ + + +M + SP +Y + ++ L
Sbjct: 215 IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 560 QDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY--MHQEKVRPN 617
+++KF +ALNL++ + +GI DV +N + Y+ ++ E++ Y M ++ + P+
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALI--TAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 618 PVT 620
VT
Sbjct: 333 TVT 335
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 257 FNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQ 316
F+DVIH + +N AK L++ M G P + ++ ++ A S + + VLK+M+
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 317 QENLKPLNSTLATLSVICSKALQLDLAESFL---DRISECLSPHPYNALLASCNVLNQPE 373
LKP T + +K +D A+ L + + LSP Y+AL+ + + +
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 374 RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNML 414
A+++ +M + + P+ Y L F +E + +L
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 110/278 (39%), Gaps = 25/278 (8%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLF---GFVNSPYEHSNMLS 415
YN L+ + + + A Q+F KM + ++PD+ +Y++L F G VN E
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME------ 246
Query: 416 QLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPS 475
+ DM N G LS LLN+L + +RE Y + NP
Sbjct: 247 ----------LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE--AYKLLCRMKLKGCNPD 294
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
L YN ++ + A + M G P+S +Y ++ +
Sbjct: 295 LVH--YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
+ MI +GFSP L+K K EA +++E +G L + + C
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
Query: 596 KRRIDIIELIVEYMHQEKVRPNP--VTCGYVFSAYVNS 631
+ + I+L +E +E++ + V G +Y++S
Sbjct: 413 EDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYLSS 450
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%)
Query: 478 TDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLIS 537
T YN+++ IA +F +M PD ++Y I++ A L+
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 538 MMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKR 597
M+ +GF P +YT L+ L + + EA LL R +L G D++ +NT + C +
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 598 RIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
R +++ M PN V+ + + G + + L+
Sbjct: 310 RAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLE 354
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G++ + SM LL+ L +E+ + + V +L + P+ T +N+ +H +A +
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQA---RVVLLQLKSHITPNAHT--FNIFIHGWCKANR 239
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
+ A+ + MK G+ P +Y ++ C + ++S M G P + TYT
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY-MHQE 612
++ L ++F EAL + R + G + D L +N + R++ E + M +
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
V N T + + Y + + AIE L+
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G++ + SM LL+ L +E+ + + V +L + P+ T +N+ +H +A +
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQA---RVVLLQLKSHITPNAHT--FNIFIHGWCKANR 239
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
+ A+ + MK G+ P +Y ++ C + ++S M G P + TYT
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY-MHQE 612
++ L ++F EAL + R + G + D L +N + R++ E + M +
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 613 KVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
V N T + + Y + + AIE L+
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 140/353 (39%), Gaps = 59/353 (16%)
Query: 321 KPLNSTLATLSVICSKALQLDLA-ESFLDRISE-CLSPHP-YNALLASCNVLNQPERAVQ 377
KP L V+ K Q + A E F + I+E C+ H Y AL+++ + + + A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 378 VFAKMKQI-KLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQ 436
+ +MK PD+ TY +L F Q+ ++ + DM G++
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSF-------------LQVFAFDKVQDLLSDMRRQGIR 253
Query: 437 HSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQI 496
+ ++ L++A G+ +M E+ + + G D + + GQI
Sbjct: 254 PNTITYNTLIDAYGKAKMFVEMESTL-----IQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 497 AI--NIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTAL 554
+ N +++ + G P+ T+NI++D +YK S ++ M + +S TY +
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 368
Query: 555 IKI---------------LLQDEK-FNEALNLLERTRLDG-------------------I 579
I L+Q E+ F + L R G I
Sbjct: 369 IDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDI 428
Query: 580 QLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+LD++ FN + + ++ ++E M ++ +P+ +T + AY SG
Sbjct: 429 RLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
M +GV S + +++ G + + IE F A + +Y L IY ++ H
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY----LDEKIYTNMIMHYG 855
Query: 490 EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTC 549
+ K A+++F M+ G P + +YN+MV C+ R + L+ M R G
Sbjct: 856 KGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLS 915
Query: 550 TYTALIKILLQDEKFNEALNLLERTRLDGI 579
TY LI++ + +F EA + + GI
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 438 SHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIA 497
+H++ +NL + E+ + ++ Y + + G S A + +L H++E Q
Sbjct: 25 NHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA----DQLLRHMIEKQ----- 75
Query: 498 INIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKI 557
IN PD T++ +++ R A + M+R P T TY ++I
Sbjct: 76 IN-----------PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 558 LLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPN 617
+ ++ ++A +L+ G DV+ F+T + C +R+D I MH+ + N
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 618 PVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMS 650
VT + + G ++A Q L M+S
Sbjct: 185 TVTYTTLIHGFCQVG----DLDAAQDLLNEMIS 213
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%)
Query: 476 LATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLL 535
+ T YNV + L ++ Q+ + M G D+ TY+ ++ C Y A
Sbjct: 184 METIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEW 243
Query: 536 ISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACY 595
M + G P TY+A++ + + K E L+L ER G + D + F+ +
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGE 303
Query: 596 KRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
D I +++ M V+PN V + A +G
Sbjct: 304 AGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 120/280 (42%), Gaps = 22/280 (7%)
Query: 366 CNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQ-LHVAKRIN 424
CN+ N +A++ F +M + L+PD TY + ++ E ++ + + + +
Sbjct: 234 CNLYN---KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 425 AIERDMANN--GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYN 482
AI + G + ++ +L + + ++ Y + E + G P LA ++N
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 483 VVLHHLV---------------EAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
+L + +A+ + A+ +++ MK + D YN +++ C+ +
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 410
Query: 528 SYKSASLLISMMIRQ-GFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLF 586
+ A L + M P +YTA++ I K +A+ L E G+Q++V+
Sbjct: 411 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGC 470
Query: 587 NTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFS 626
++ +RID + + + + V+P+ CG + S
Sbjct: 471 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLS 510
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 472 GNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKS 531
G P T YN+++ +L + + A+ + + M L G PD TYN ++ C + +
Sbjct: 170 GVPDTIT--YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 532 ASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLR 591
A ++ G P TYT L++++ + A+ +LE ++G D++ +N+ +
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 592 QACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
C + ++ + +++++ + N VT + + + + + E L ++
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYN-IMVDCCSILRSYKSASLLISM 538
I N +L LV+ K I +F +MK G PD TYN ++ C + Y A LI
Sbjct: 168 ICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGE 227
Query: 539 MIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRR 598
+ G + Y ++ I + + EA N +++ +++G ++ +++ L +K
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGD 287
Query: 599 IDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
+ ++ M + PN V + Y+ G + + E L L
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL 333
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 27/259 (10%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTY----------ELLFSL-FGFVN-- 405
+ L+++ + E+AV+ F +MK+ PD+ TY E+ F L F N
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEM 189
Query: 406 -----SP--YEHSNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMI 455
SP Y ++ L+ R + ++ DM G+ + ++ L++ L +
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 456 RELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSET 515
+ + FY + Y + S+A +N +L + + A + + + G+
Sbjct: 250 DDARKLFYEMQTSGNYPD-SVA---HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 516 YNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTR 575
Y+ ++D R Y A L + M+++ P YT LI+ L + K +AL LL
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 576 LDGIQLDVLLFNTFLRQAC 594
GI D +N ++ C
Sbjct: 366 SKGISPDTYCYNAVIKALC 384
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 39/274 (14%)
Query: 357 HPYNA------LLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEH 410
+P++A L CNV+ P A +V+ +M + + D+ +Y + S + S
Sbjct: 262 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGS---- 317
Query: 411 SNMLSQLHVAKRINAIERDM-ANNGVQH-----SHLS-MKNLLNALGEERMIRELIEYFY 463
N + +L + IE D N V H S +S +NL+ + EE+ I
Sbjct: 318 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGI-------- 369
Query: 464 VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
P++ T YN ++ L +A+K + A +F M G P TY+ +
Sbjct: 370 ---------EPNVVT--YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM--- 415
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
ILR+ + L++ M + G P TY LI+ L + F+ L L + + + D+
Sbjct: 416 RILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDL 475
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPN 617
+ + +I+ + M + +RPN
Sbjct: 476 SSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 8/223 (3%)
Query: 464 VAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCC 523
+ EK+ +G PS T YN ++ L ++ +R+ G P++ TY+ +++
Sbjct: 163 LVEKMEDHGYPS-NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 524 SILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDV 583
R A L+ +I +G P +Y L+ ++ + ++A+ L G + +V
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 584 LLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNS-GFHNTAIEALQ 642
+ +N LR C R + ++ M P+ VT ++ +NS FH +ALQ
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT----YNILINSLAFHGRTEQALQ 337
Query: 643 VLSLRMMSEDGNILREKRRFVDEFILAEDSAAESDILVKLFED 685
V L+ MS+ + R + I + D++VK ++
Sbjct: 338 V--LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 378
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 164/435 (37%), Gaps = 62/435 (14%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
++ +++ K N A +L+ +M+ G ++ TY+ +++ + L ++ +
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI-SECLSPH--PYNALLASCNVLNQP 372
Q+ L P T + L K D A LD I + P+ YN LL +
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 373 ERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMAN 432
+ A+ +F ++ ++ +Y +L E +++L+++ R ++
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSV------ 316
Query: 433 NGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPS--LATDIYNVVLHHLVE 490
++ L+N+L + ++ K GN + YN V+ L +
Sbjct: 317 -------VTYNILINSLAFHGRTEQALQVLKEMSK----GNHQFRVTATSYNPVIARLCK 365
Query: 491 AQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCS----------ILRS------------ 528
K + + M P+ TYN + C I++S
Sbjct: 366 EGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF 425
Query: 529 YKS-------------ASLLISMMIRQGFSPVTCTYTALIKILLQDEKFN---EALNLLE 572
YKS A L+ M R GF P TY+ALI+ L + F E L+++E
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 573 RTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSG 632
+ + + V FN + C RR D+ + E M ++K PN T + +
Sbjct: 486 ES--ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHED 543
Query: 633 FHNTAIEALQVLSLR 647
A E L L LR
Sbjct: 544 ELELAKEVLDELRLR 558
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 480 IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMM 539
++N ++ L EA + A+ + +R +C P TYN +V AS ++ MM
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 540 IRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRI 599
+ +G P T TY K + K E +NL + G D L ++ L+ C ++
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKL 441
Query: 600 DIIELIVEYMHQEKVRPNPVT 620
+ + + M + P+ +T
Sbjct: 442 SLAMQVNKEMKNRGIDPDLLT 462
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL-------------FSLFGFV- 404
Y++ L++ RA +F ++ ++ LLPD Y + F FG +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 405 ---NSPYEHSNML-----SQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIR 456
N P ++ + S+ ++ R+M G++ ++ NL++ G+ +
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 457 ELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETY 516
++ E + E +P +AT YN+++H +V A I + G+ P + +
Sbjct: 496 KVFEL--IDEMRSAGISPDVAT--YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
++ S ++ A +L M P T +AL+ + ++ +A+ L +
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
G++ DV+L+NT + C I+ ++ M Q + PN T
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
YN ++H + + + M+ G PD TYNI++ + A+ +IS +I
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
R+GF P T +T +I + F EA L ++ DV+ + L C +R++
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMM 649
++ + ++P+ V + Y + G A E + ++ R M
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 359 YNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELL-------------FSLFGFV- 404
Y++ L++ RA +F ++ ++ LLPD Y + F FG +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 405 ---NSPYEHSNML-----SQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIR 456
N P ++ + S+ ++ R+M G++ ++ NL++ G+ +
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 457 ELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETY 516
++ E + E +P +AT YN+++H +V A I + G+ P + +
Sbjct: 496 KVFEL--IDEMRSAGISPDVAT--YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 551
Query: 517 NIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRL 576
++ S ++ A +L M P T +AL+ + ++ +A+ L +
Sbjct: 552 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 577 DGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVT 620
G++ DV+L+NT + C I+ ++ M Q + PN T
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
YN ++H + + + M+ G PD TYNI++ + A+ +IS +I
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
R+GF P T +T +I + F EA L ++ DV+ + L C +R++
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMM 649
++ + ++P+ V + Y + G A E + ++ R M
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 16/276 (5%)
Query: 370 NQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
N P+R +++ + L PD ++FS+ + +H +SQL ++
Sbjct: 53 NNPDRILEI---CRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQL--------LDGF 101
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLV 489
+ N S + G M+ I+ F E+ Y P + N +L +
Sbjct: 102 IQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQ---YEIPRTVKSL-NALLFACL 157
Query: 490 EAQKGQIAINIFKRM-KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVT 548
A+ + A ++ M K+ G PD ETYN M+ S S+ +++ M R+ P
Sbjct: 158 MAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTA 217
Query: 549 CTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEY 608
++ +I ++EKF+E ++ G+ + V +N ++ C +++ + +++
Sbjct: 218 ASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDG 277
Query: 609 MHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVL 644
+ ++RPN VT + + + + A+ +V+
Sbjct: 278 VMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
>AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9151816-9154407 FORWARD
LENGTH=630
Length = 630
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 479 DIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISM 538
D YN +L+ + +K A N+F+ + G PDS TY+++VD I R KSA ++
Sbjct: 506 DSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSLLVDAHLINRDPKSALTVVDD 565
Query: 539 MIRQGFSP 546
MI+ GF P
Sbjct: 566 MIKAGFEP 573
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 245 KHLQLMKVLRWSFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSN 304
K +++M + W N ++ G A+ +L QMK LG+KP T+ G++ A S
Sbjct: 677 KRIEMMNITAW--NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 305 FRDGLGVLKIMQQE-NLKPLNSTLATLSVICSKALQLDLAESFLDRISECLSPHPYNALL 363
+ ++ M + +KP + L+ +A + AE+ ++ +S S Y LL
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 364 ASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFG 402
A+C V E +V K+ +++ L D Y LL +++
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPL-DSSAYVLLSNMYA 832
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 147/346 (42%), Gaps = 32/346 (9%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
+ N +I G K + AK+++ + I KP+ TY + N ++ V + M
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 316 QQENLKPLNSTLATLSVICSKALQLD-LAESFLDRISECLSPH--PYNALLAS-CNVLNQ 371
+++ + P TL K L+ +A+ ++ + L+P Y AL+ CN+
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI-GM 626
Query: 372 PERAVQVFAKM--KQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERD 429
++A +M K I L +I + ++ SLF + + +L Q ++ D
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICS-KIANSLFRL--DKIDEACLLLQ-------KIVDFD 676
Query: 430 MANNGVQHSHLSMKNLLNALG----EERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVL 485
+ G Q S+K L A + + I E +E +KL V N +YNV +
Sbjct: 677 LLLPGYQ----SLKEFLEASATTCLKTQKIAESVEN-STPKKLLVPNNI-----VYNVAI 726
Query: 486 HHLVEAQKGQIAINIFKRMKLCG-YHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGF 544
L +A K + A +F + + PD TY I++ C+I A L M +G
Sbjct: 727 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI 786
Query: 545 SPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFL 590
P TY ALIK L + + A LL + GI + + +NT +
Sbjct: 787 IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 125/305 (40%), Gaps = 27/305 (8%)
Query: 344 ESFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGF 403
E L+++S P +L C P A++ F +KQ GF
Sbjct: 143 EDRLEKLSFRFEPEIVENVLKRC--FKVPHLAMRFFNWVKQKD---------------GF 185
Query: 404 VNSPYEHSNMLSQLHVAKRINAIER---DMANNGVQHSHLSMKNLLNALGEERMIRELIE 460
+ ++ MLS A+ ++ ++ +M NG + L++ G+ + I + +
Sbjct: 186 SHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLL 245
Query: 461 YFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMV 520
F EK+ G AT YN+++ L A +G +A+ +K M G TY +++
Sbjct: 246 VF---EKMRKSGFELDAT-AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 521 DCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQ 580
DC + + M+R + L+K K EAL L+ + +
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 361
Query: 581 LDVLLFNTFLRQACYKRR-IDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIE 639
LD F ++ C R +D +E IV+ M + K+ + V G + S Y+ + A+E
Sbjct: 362 LDAKYFEILVKGLCRANRMVDALE-IVDIMKRRKLDDSNVY-GIIISGYLRQNDVSKALE 419
Query: 640 ALQVL 644
+V+
Sbjct: 420 QFEVI 424
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 482 NVVLHHLVEAQKGQIAINIFKRM-KLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
N +L + A+ + A ++ M K+ G PD ETYN M+ S S+ +++ M
Sbjct: 155 NALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEME 214
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
R+G P + ++ +I ++K +E +L + G+ + V +N ++ C +++
Sbjct: 215 RKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSK 274
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDG 653
+ +++ M ++PN VT ++ + N A + +++ R D
Sbjct: 275 EAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 26/265 (9%)
Query: 260 VIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIMQQEN 319
+I C KE+ + LA K+ M G+KP+ + +I + V +++
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 320 LKPLNSTLATLSVICSKALQLDLAESFLDRISE----CLSPHPYNALLASCNVLNQPERA 375
KP T L KA + + D I CL+ + YN + SC L E+A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 376 VQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGV 435
V++ +M+ L +Y L+ S S +L H+A +RD N
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVIS--ACEKSRKSKVALLVYEHMA------QRDCKPNTF 461
Query: 436 QHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQ 495
+ L + +L +E E + P ++ +YN +H + ++ +
Sbjct: 462 TYLSLVRSCIWGSLWDE------------VEDILKKVEPDVS--LYNAAIHGMCLRREFK 507
Query: 496 IAINIFKRMKLCGYHPDSETYNIMV 520
A ++ +M+ G PD +T +M+
Sbjct: 508 FAKELYVKMREMGLEPDGKTRAMML 532
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 504 MKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEK 563
MK G PD TYN ++D R + A LI M + +P TYT +I L +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 564 FNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGY 623
++A +L+ + G DV +N +R C RR+ + +V+ M ++ + PN T
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 624 VF 625
F
Sbjct: 357 FF 358
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 35/326 (10%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVLKIM 315
SFN ++ C E++++ A K + K + SC+Y+ +I S + VLK M
Sbjct: 223 SFNALLR-CLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEM 281
Query: 316 QQENLKPLNSTLATLSVICSKALQLDLAESFLDRI---SECLSPHPYNALLASCNVLNQP 372
+ P + + L + +++ + D I + YNA++ CN ++
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMI--CNFISAR 339
Query: 373 E--RAVQVFAKMKQIKLLPDIRTYELLFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDM 430
+ +++ + +M + P++ TY L S ++ V+ + E +M
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVS------------GLIKGRKVSDALEIFE-EM 386
Query: 431 ANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVY-----GNPSLATDIYNVVL 485
+ GV L L+ + ++ L Y + +Y ++ Y ++L
Sbjct: 387 LSRGV----LPTTGLVTSF-----LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL 437
Query: 486 HHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFS 545
L K + +N++ M+ GY D E Y +VD I+ ++A L++ +R+GF
Sbjct: 438 KRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFC 497
Query: 546 PVTCTYTALIKILLQDEKFNEALNLL 571
P Y+ L L+ K A L
Sbjct: 498 PNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 7/189 (3%)
Query: 455 IRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHP-DS 513
+R IE F +E V +T+ +N +L L E A ++F K G P DS
Sbjct: 202 VRRAIELFEESESFGV----KCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDS 255
Query: 514 ETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
+YNIM+ S L + ++ M+ GF P +Y+ LI+ L + + N+++ + +
Sbjct: 256 CSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN 315
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGF 633
+ G D ++N + R D M E+ PN T + S +
Sbjct: 316 IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 634 HNTAIEALQ 642
+ A+E +
Sbjct: 376 VSDALEIFE 384
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 27/316 (8%)
Query: 345 SFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV 404
FL + C NA ++S + + A++ + +M++ K+ P+ T ++ S G+
Sbjct: 198 GFLPTVESC------NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS--GYC 249
Query: 405 NSPYEHSNMLSQLHVAKRINAIE--RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYF 462
S K IE +DM G + + +S L+ E+ ++ ++
Sbjct: 250 RS-------------GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 463 YVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC 522
+ K + P++ T +N ++H A K Q A +F MK P++ TYN +++
Sbjct: 297 NMMGKSGL--QPNVVT--FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
S ++ A M+ G TY ALI L + K +A ++ + + +
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 583 VLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
F+ + C ++ D + + M + PN T + SA+ + + A + L+
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 643 VLSLRMMSEDGNILRE 658
+ R + D + +
Sbjct: 473 EMVRRSIPLDSRTVHQ 488
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 27/316 (8%)
Query: 345 SFLDRISECLSPHPYNALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV 404
FL + C NA ++S + + A++ + +M++ K+ P+ T ++ S G+
Sbjct: 198 GFLPTVESC------NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS--GYC 249
Query: 405 NSPYEHSNMLSQLHVAKRINAIE--RDMANNGVQHSHLSMKNLLNALGEERMIRELIEYF 462
S K IE +DM G + + +S L+ E+ ++ ++
Sbjct: 250 RS-------------GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 463 YVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDC 522
+ K + P++ T +N ++H A K Q A +F MK P++ TYN +++
Sbjct: 297 NMMGKSGL--QPNVVT--FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 523 CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLD 582
S ++ A M+ G TY ALI L + K +A ++ + + +
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 583 VLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQ 642
F+ + C ++ D + + M + PN T + SA+ + + A + L+
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 643 VLSLRMMSEDGNILRE 658
+ R + D + +
Sbjct: 473 EMVRRSIPLDSRTVHQ 488
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 29/293 (9%)
Query: 340 LDLAESFLDRI-SECLSPHPY--NALLASCNVLNQPERAVQVFAKMKQIKLLPDIRTYEL 396
+D A + L ++ SE L+P N ++ + L + E A +VF +++ KL+PD
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPD------ 351
Query: 397 LFSLFGFVNSPYEHSNMLSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIR 456
Y +++LS L ++ + + + R G ++ L N +
Sbjct: 352 ----------QYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK----- 396
Query: 457 ELIEYFYVAEK---LFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDS 513
I Y A K + Y + +L Y V L L + AI ++K + H D+
Sbjct: 397 --IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDA 454
Query: 514 ETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
++ ++D L Y +A L I + + +YT IK L++ ++ EA +L
Sbjct: 455 HFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCD 514
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFS 626
+ GI + + T + C ++ + + I+ QE V +P T V+S
Sbjct: 515 MKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYS 567
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%)
Query: 481 YNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMI 540
YN +L L ++ +F+ M G PD+ ++ I + SA ++ M
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 541 RQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
R P T+ +IK L ++EK ++A LL+ G D +N+ + C ++
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 601 IIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEALQVLSLR 647
++ M + K P+ T V + G + A E + +S R
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 27/228 (11%)
Query: 359 YNALLASCNVLNQPERAVQVFAKM---KQIKLLPDIRTYELLF-SLFGFVNSPY-EHSNM 413
YN+++ + RAV +F M K ++ P IRTY +LF +L G N+ Y H M
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 414 LSQLHVAKRINAIERDMANNGVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGN 473
+ + ++ R M ++G++ + LN L ++ + +V + L ++
Sbjct: 270 -------ETVRSLFRQMVDSGIEPDVFA----LNCL-----VKGYVLSLHVNDALRIFHQ 313
Query: 474 PSLATD------IYNVVLHHLVEAQKGQIAINIFKRMKLCGYHPDSETYNIMVDCCSILR 527
S+ D Y+ ++H L + A + MK G+ P+ ++YN +V+ ++
Sbjct: 314 MSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSG 373
Query: 528 SYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTR 575
A + MI G +Y L+ + K++EA LLE R
Sbjct: 374 EIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 421
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 462 FYVAEKLFVYGNPSLATDIYNVVLHHLVEAQKGQIAINIFKRM-KLCGYHPDSETYNIMV 520
F V E++ G + Y+ ++ L + + A+ +F+ M G PD T+N+M+
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 521 DCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLERTRLDGIQ 580
+ + A ++ M + G +P Y+AL+ + K EA + + G++
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 581 LDVLLFNTFLRQACYKRRIDIIELIVEYMHQEKVRPNPVTCGYVFSAYVNSGFHNTAIEA 640
LD + + T + C D ++ M + R + +T + + G + EA
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEG---RSEEA 392
Query: 641 LQVL 644
LQ+L
Sbjct: 393 LQML 396
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 434 GVQHSHLSMKNLLNALGEERMIRELIEYFYVAEKLFVYGNPSLATDIYNVVLHHLVEAQK 493
G +H H + +L+ GE I+ + F++ ++ V + T Y ++H + +
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVL----IDTVTYTSLIHWVSSSGD 172
Query: 494 GQIAINIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTA 553
A+ +++ M+ G P +Y + + A+ + M+R SP TYT
Sbjct: 173 VDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTV 232
Query: 554 LIKILLQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQEK 613
L++ L+ K EAL++ + + G+Q D N + +A + ++ YM +
Sbjct: 233 LMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKE-- 290
Query: 614 VRPNPVTCGY-VFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILRE 658
N V Y +F +EAL+ +L+ E ++LRE
Sbjct: 291 ---NGVVLRYPIF------------VEALE--TLKAAGESDDLLRE 319
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 515 TYNIMVDC-CSILRSYKSASLLISMMIRQGFSPVTCTYTALIKILLQDEKFNEALNLLER 573
TY +++C C L + K+ LL + M +P + +Y +L+ + + + + +++
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLL-NKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 574 TRLDGIQLDVLLFNTFLRQACYKRRIDIIELIVEYMHQE-KVRPNPVTCGYVFSAYVNSG 632
+ + + D +N ++R I +E ++E M+++ +V P+ T + S YV++G
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 633 FHNTAIEALQVLSLRMMSED 652
A +ALQ L ++ D
Sbjct: 244 LSQKAEKALQELEMKNTQRD 263
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 256 SFNDVIHGCAKEKNYMLAKKLIVQMKILGVKPSSCTYDGIIQAASFQSNFRDGLGVL-KI 314
S++ +I+ AK +N+ +++ ++ V+ + G+IQ + + V KI
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 315 MQQENLKPLNSTLATLSVICSKALQLDLAESFLDRISEC-LSPHP--YNALLASCNVLNQ 371
+ ++ + S ++V+ +L+ A+SF D + L P+ +N L+
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNG-ELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCD 201
Query: 372 PERAVQVFAKMKQIKLLPDIRTYELLFSLFGFV--NSPYEHSNMLSQLHVAKRINAIERD 429
E A +VF +M ++++ P + TY SL GF+ N + L + + KRI
Sbjct: 202 WEAACKVFDEMLEMEVQPSVVTYN---SLIGFLCRNDDMGKAKSLLEDMIKKRIRP---- 254
Query: 430 MANNGVQHSHLSMKNLLNALGEERMIRELI---EYFYVAEKLFVYGNPSLATDIYNVVLH 486
N V L MK L GE ++L+ EY L YG L +D+
Sbjct: 255 ---NAVTFG-LLMKGLC-CKGEYNEAKKLMFDMEYRGCKPGLVNYG--ILMSDL------ 301
Query: 487 HLVEAQKGQI--AINIFKRMKLCGYHPDSETYNIMVD-CCSILRSYKSASLLISMMIRQG 543
++G+I A + MK PD YNI+V+ C+ R ++ +L M ++ G
Sbjct: 302 ----GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK-G 356
Query: 544 FSPVTCTYTALIKILLQDEKFNEALNLL 571
P TY +I + E F+ LN+L
Sbjct: 357 CKPNAATYRMMIDGFCRIEDFDSGLNVL 384
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 499 NIFKRMKLCGYHPDSETYNIMVDCCSILRSYKSASLLISMMIRQGFSPVTCTYTALIKIL 558
+++ R++ G H + E YN +++CC+ S MIR GF+P T T+ L+ +
Sbjct: 650 HLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY 709
Query: 559 LQDEKFNEALNLLERTRLDGIQLDVLLFNTFLRQACYKRRID 600
+ + F + L + G+ +DV+ +NT + A Y + D
Sbjct: 710 GKAKLFKKVNELFLLAKRHGV-VDVISYNTII--AAYGKNKD 748